[Hub]/) : Traits : Forced vital capacity (FVC) : ← →

chr16:29,580,611-31,833,122

Best TWAS P=3.73e-14 · Best GWAS P=2.33e-12 conditioned to 1

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
57	GTEx	Thyroid	MIR4519	0.09	0.00	lasso	6	0.01	3.7e-02	-6.9	7.6	3.7e-14	-0.98	0.01	0.92	TRUE
74	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	BCL7C	0.04	0.01	blup	29	0.02	6.9e-03	-6.0	7.4	1.3e-13	-0.72	0.04	0.48	TRUE
26	GTEx	Esophagus Mucosa	STX4	0.08	0.00	enet	21	0.02	1.0e-02	-6.0	-6.9	5.3e-12	0.72	0.05	0.92	TRUE
85	The Cancer Genome Atlas	Prostate Adenocarcinoma	HSD3B7	0.24	0.27	lasso	6	0.26	2.0e-27	-6.0	-6.0	2.4e-09	0.40	0.06	0.94	TRUE
59	GTEx	Uterus	TBX6	0.29	0.04	lasso	6	0.10	4.5e-03	3.9	5.9	3.4e-09	-0.24	0.02	0.64	TRUE
67	ROSMAP	Brain Pre-frontal Cortex	VKORC1	0.05	0.02	enet	12	0.05	1.2e-06	-5.1	5.8	8.4e-09	-0.47	0.40	0.58	TRUE
12	GTEx	Brain Cerebellum	STX1B	0.24	0.16	lasso	11	0.18	4.8e-06	-6.2	-5.7	1.6e-08	0.36	0.44	0.48	TRUE
77	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	RNF40	0.07	0.00	blup	11	0.02	2.8e-02	-6.9	5.6	2.3e-08	-0.82	0.00	0.49	TRUE
63	NTR	Blood	BCKDK	0.01	0.00	bslmm	242	0.01	2.5e-03	4.9	5.3	9.4e-08	-0.30	0.41	0.04	TRUE
61	GTEx	Whole Blood	RP11-196G11.2	0.07	0.05	lasso	3	0.06	1.4e-06	-6.1	-7.0	2.1e-12	0.58	0.29	0.70	FALSE
70	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	HSD3B7	0.04	0.02	enet	13	0.03	2.1e-03	-5.9	-6.9	3.7e-12	0.65	0.02	0.53	FALSE
28	GTEx	Esophagus Mucosa	RP11-196G11.2	0.09	0.03	enet	13	0.05	1.5e-04	-6.1	-6.8	1.2e-11	0.46	0.26	0.59	FALSE
50	GTEx	Skin Sun Exposed Lower leg	RP11-196G11.2	0.16	0.15	lasso	7	0.15	4.0e-12	-6.2	-6.8	1.4e-11	0.49	0.45	0.55	FALSE
40	GTEx	Nerve Tibial	RP11-196G11.2	0.17	0.22	lasso	6	0.22	2.3e-15	-6.1	-6.7	2.4e-11	0.48	0.51	0.49	FALSE
8	GTEx	Artery Coronary	RP11-196G11.2	0.12	0.06	lasso	6	0.06	3.4e-03	-6.1	-6.7	2.8e-11	0.48	0.09	0.74	FALSE
47	GTEx	Skin Not Sun Exposed Suprapubic	RP11-196G11.2	0.22	0.21	lasso	9	0.26	3.2e-14	-6.1	-6.5	1.1e-10	0.44	0.48	0.52	FALSE
83	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	STX1B	0.02	0.01	blup	32	0.01	5.5e-02	-6.2	-6.3	2.2e-10	0.41	0.02	0.52	FALSE
89	The Cancer Genome Atlas	Thyroid Carcinoma	PRSS53	0.11	0.04	enet	8	0.05	9.7e-06	-5.9	6.3	3.5e-10	-0.52	0.01	0.97	FALSE
15	GTEx	Brain Nucleus accumbens basal ganglia	STX4	0.19	0.11	enet	14	0.09	2.6e-03	-6.0	6.3	3.6e-10	-0.54	0.07	0.55	FALSE
11	GTEx	Brain Cerebellar Hemisphere	RP11-196G11.2	0.18	0.06	lasso	6	0.10	1.7e-03	-6.0	-6.3	4.1e-10	0.33	0.12	0.52	FALSE
18	GTEx	Breast Mammary Tissue (Male)	RP11-196G11.2	0.15	0.16	lasso	4	0.09	3.9e-03	-6.2	-6.2	5.0e-10	0.36	0.28	0.34	FALSE
17	GTEx	Breast Mammary Tissue	RP11-196G11.2	0.13	0.16	lasso	4	0.17	5.0e-09	-6.2	-6.2	5.3e-10	0.37	0.35	0.65	FALSE
2	GTEx	Adipose Subcutaneous	RP11-196G11.2	0.23	0.20	lasso	9	0.21	4.2e-17	-6.1	-6.2	5.4e-10	0.38	0.45	0.55	FALSE
21	GTEx	Colon Transverse	STX4	0.10	0.09	lasso	3	0.06	6.6e-04	-6.2	-6.2	5.5e-10	0.36	0.24	0.38	FALSE
42	GTEx	Pancreas	STX1B	0.23	0.18	lasso	3	0.16	2.8e-07	-6.2	-6.2	5.5e-10	0.36	0.36	0.64	FALSE
84	The Cancer Genome Atlas	Pheochromocytoma and Paraganglioma	HSD3B7	0.09	0.12	blup	31	0.11	4.1e-05	-5.9	-6.2	5.9e-10	0.41	0.06	0.88	FALSE
41	GTEx	Ovary	RP11-196G11.2	0.41	0.22	lasso	10	0.25	6.0e-07	-6.2	-6.2	6.0e-10	0.41	0.51	0.46	FALSE
48	GTEx	Skin Sun Exposed Lower leg	STX1B	0.05	0.04	enet	4	0.05	7.2e-05	-6.2	-6.2	6.6e-10	0.37	0.37	0.55	FALSE
19	GTEx	Cells Transformed fibroblasts	RP11-196G11.2	0.14	0.14	lasso	6	0.13	2.9e-10	-5.9	-6.2	6.7e-10	0.38	0.54	0.46	FALSE
52	GTEx	Stomach	RP11-196G11.2	0.25	0.16	enet	21	0.14	4.6e-07	-5.4	-6.2	6.7e-10	0.67	0.20	0.80	FALSE
58	GTEx	Thyroid	RP11-196G11.2	0.11	0.14	lasso	2	0.14	3.5e-11	-6.1	-6.2	6.9e-10	0.37	0.40	0.60	FALSE
55	GTEx	Testis	RP11-196G11.2	0.14	0.11	lasso	4	0.13	3.1e-06	-6.1	-6.2	7.0e-10	0.37	0.46	0.52	FALSE
32	GTEx	Heart Left Ventricle	HSD3B7	0.12	0.08	lasso	3	0.07	2.0e-04	-5.9	-6.2	7.3e-10	0.40	0.54	0.32	FALSE
30	GTEx	Esophagus Muscularis	RP11-196G11.2	0.14	0.14	lasso	6	0.13	3.7e-08	-6.1	-6.2	7.5e-10	0.35	0.52	0.48	FALSE
37	GTEx	Nerve Tibial	STX1B	0.21	0.14	enet	17	0.18	1.6e-12	-6.2	-6.1	7.9e-10	0.39	0.38	0.62	FALSE
7	GTEx	Artery Aorta	RP11-196G11.2	0.10	0.16	lasso	2	0.14	7.1e-08	-6.1	-6.1	8.1e-10	0.38	0.47	0.52	FALSE
60	GTEx	Uterus	RP11-196G11.2	0.18	0.16	lasso	20	0.15	5.4e-04	-6.1	-6.1	8.6e-10	0.40	0.37	0.35	FALSE
29	GTEx	Esophagus Muscularis	STX4	0.05	0.05	lasso	3	0.03	6.7e-03	-6.1	-6.1	9.7e-10	0.37	0.28	0.44	FALSE
14	GTEx	Brain Cerebellum	RP11-196G11.2	0.31	0.30	lasso	4	0.36	1.3e-11	-6.0	-6.1	9.9e-10	0.38	0.42	0.58	FALSE
43	GTEx	Pancreas	RP11-196G11.2	0.13	0.11	lasso	1	0.11	2.5e-05	-6.1	-6.1	1.0e-09	0.37	0.36	0.52	FALSE
54	GTEx	Testis	STX4	0.15	0.02	lasso	6	0.01	8.2e-02	-6.0	-6.1	1.2e-09	0.39	0.12	0.33	FALSE
1	CommonMind	Brain Pre-frontal Cortex	HSD3B7	0.05	0.06	lasso	4	0.07	5.5e-09	-6.0	-6.0	1.5e-09	0.34	0.56	0.44	FALSE
56	GTEx	Thyroid	STX1B	0.11	0.16	enet	19	0.16	3.9e-12	-6.0	-6.0	1.6e-09	0.37	0.47	0.53	FALSE
45	GTEx	Pituitary	RP11-196G11.2	0.21	0.28	lasso	6	0.23	1.4e-06	-6.1	-6.0	1.7e-09	0.38	0.39	0.42	FALSE
62	METSIM	Adipose	RP11-196G11.2	0.13	0.17	lasso	9	0.16	2.2e-23	-6.0	-6.0	1.8e-09	0.35	0.54	0.46	FALSE
68	ROSMAP	Brain Pre-frontal Cortex	RP11-196G11.2	0.12	0.12	lasso	4	0.12	1.1e-14	-6.0	-6.0	1.9e-09	0.34	0.46	0.55	FALSE
13	GTEx	Brain Cerebellum	STX4	0.14	0.25	lasso	1	0.24	8.3e-08	-6.0	-6.0	2.1e-09	0.37	0.40	0.51	FALSE
49	GTEx	Skin Sun Exposed Lower leg	HSD3B7	0.12	0.17	lasso	5	0.16	2.7e-13	-6.0	-6.0	2.1e-09	0.39	0.68	0.32	FALSE
6	GTEx	Artery Aorta	STX1B	0.17	0.18	lasso	6	0.15	1.9e-08	-5.9	-6.0	2.2e-09	0.36	0.57	0.42	FALSE
23	GTEx	Esophagus Gastroesophageal Junction	RP11-196G11.2	0.13	0.11	enet	8	0.14	1.2e-05	-6.1	-6.0	2.2e-09	0.35	0.42	0.45	FALSE
22	GTEx	Colon Transverse	RP11-196G11.2	0.24	0.11	lasso	5	0.15	1.9e-07	-6.1	-6.0	2.4e-09	0.33	0.48	0.52	FALSE
69	YFS	Blood	STX4	0.03	0.06	lasso	2	0.05	4.3e-17	-5.9	-6.0	2.5e-09	0.36	0.42	0.58	FALSE
66	ROSMAP	Brain Pre-frontal Cortex	STX4	0.06	0.11	lasso	10	0.11	1.4e-13	-6.0	6.0	2.6e-09	-0.38	0.51	0.49	FALSE
38	GTEx	Nerve Tibial	HSD3B7	0.09	0.05	lasso	3	0.03	2.4e-03	-6.1	-5.9	3.2e-09	0.38	0.20	0.25	FALSE
86	The Cancer Genome Atlas	Prostate Adenocarcinoma	PRSS53	0.06	0.02	enet	7	0.04	4.7e-05	-6.1	5.9	3.4e-09	-0.36	0.01	0.99	FALSE
44	GTEx	Pituitary	HSD3B7	0.13	0.07	lasso	7	0.05	2.1e-02	-5.8	-5.9	3.5e-09	0.39	0.30	0.17	FALSE
10	GTEx	Brain Cerebellar Hemisphere	STX1B	0.13	0.11	lasso	5	0.10	1.5e-03	-5.8	-5.9	3.7e-09	0.39	0.10	0.26	FALSE
79	The Cancer Genome Atlas	Brain Lower Grade Glioma	ZNF668	0.02	0.01	enet	8	0.02	3.1e-03	4.4	5.9	3.8e-09	-0.29	0.03	0.68	FALSE
64	ROSMAP	Brain Pre-frontal Cortex	STX1B	0.08	0.10	lasso	7	0.10	3.0e-12	-5.9	-5.9	4.1e-09	0.40	0.78	0.22	FALSE
34	GTEx	Muscle Skeletal	HSD3B7	0.15	0.13	enet	19	0.14	5.5e-14	-6.0	-5.9	4.5e-09	0.37	0.55	0.45	FALSE
73	The Cancer Genome Atlas	Glioblastoma Multiforme	MYST1	0.18	0.07	blup	35	0.11	4.2e-04	4.4	-5.9	4.7e-09	0.28	0.05	0.70	FALSE
65	ROSMAP	Brain Pre-frontal Cortex	HSD3B7	0.03	0.05	lasso	6	0.02	3.0e-04	-6.0	-5.8	5.0e-09	0.30	0.50	0.47	FALSE
51	GTEx	Small Intestine Terminal Ileum	RP11-196G11.2	0.18	0.07	enet	15	0.06	1.5e-02	-6.1	-5.8	5.2e-09	0.44	0.08	0.36	FALSE
88	The Cancer Genome Atlas	Thyroid Carcinoma	HSD3B7	0.20	0.27	lasso	12	0.28	1.8e-27	-5.9	-5.8	6.1e-09	0.37	0.08	0.92	FALSE
25	GTEx	Esophagus Mucosa	HSD3B7	0.38	0.32	lasso	5	0.36	1.2e-24	-6.0	-5.8	6.7e-09	0.33	0.67	0.33	FALSE
35	GTEx	Muscle Skeletal	STX4	0.04	0.04	lasso	3	0.03	2.9e-04	-5.9	-5.8	7.9e-09	0.32	0.51	0.42	FALSE
53	GTEx	Testis	STX1B	0.26	0.23	lasso	5	0.25	1.2e-11	-6.0	-5.8	8.7e-09	0.37	0.49	0.51	FALSE
39	GTEx	Nerve Tibial	STX4	0.07	0.04	enet	16	0.04	9.4e-04	-6.1	-5.7	9.3e-09	0.37	0.54	0.30	FALSE
87	The Cancer Genome Atlas	Prostate Adenocarcinoma	STX1B	0.04	0.03	blup	32	0.04	9.5e-05	-5.9	-5.7	1.0e-08	0.39	0.06	0.92	FALSE
46	GTEx	Skin Not Sun Exposed Suprapubic	HSD3B7	0.11	0.12	enet	6	0.10	5.9e-06	-6.0	-5.7	1.3e-08	0.33	0.67	0.31	FALSE
4	GTEx	Adipose Visceral Omentum	RP11-196G11.2	0.08	0.07	enet	16	0.08	8.4e-05	-5.9	-5.7	1.5e-08	0.31	0.56	0.36	FALSE
36	GTEx	Muscle Skeletal	RP11-196G11.2	0.15	0.10	enet	10	0.12	1.0e-11	-6.2	-5.7	1.6e-08	0.39	0.45	0.55	FALSE
75	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	MYST1	0.08	0.04	blup	34	0.07	7.2e-08	5.1	-5.6	2.0e-08	0.20	0.01	0.99	FALSE
81	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	HSD3B7	0.04	0.04	blup	31	0.05	3.6e-04	-6.0	-5.6	2.8e-08	0.27	0.03	0.77	FALSE
5	GTEx	Adrenal Gland	HSD3B7	0.21	0.17	lasso	4	0.13	2.9e-05	-6.0	-5.5	3.2e-08	0.37	0.32	0.25	FALSE
80	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	HSD3B7	0.08	0.05	blup	31	0.05	1.8e-03	-6.0	-5.5	3.4e-08	0.33	0.06	0.85	FALSE
78	The Cancer Genome Atlas	Brain Lower Grade Glioma	PRSS53	0.07	0.04	enet	12	0.04	2.8e-05	-6.2	5.5	4.6e-08	-0.32	0.01	0.99	FALSE
20	GTEx	Colon Transverse	HSD3B7	0.16	0.15	enet	20	0.19	2.1e-09	-5.9	-5.4	6.3e-08	0.38	0.59	0.41	FALSE
82	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	MYST1	0.03	0.05	blup	34	0.03	2.1e-03	4.4	-5.4	6.5e-08	0.21	0.08	0.62	FALSE
27	GTEx	Esophagus Mucosa	BCKDK	0.05	0.05	enet	6	0.06	8.7e-05	4.4	5.3	9.7e-08	-0.28	0.43	0.06	FALSE
9	GTEx	Artery Tibial	RP11-196G11.2	0.08	0.04	lasso	4	0.03	3.8e-03	-6.1	-5.3	1.0e-07	0.27	0.41	0.48	FALSE
71	The Cancer Genome Atlas	Breast Invasive Carcinoma	HSD3B7	0.03	0.03	blup	31	0.04	5.2e-08	-5.9	-5.3	1.1e-07	0.24	0.06	0.94	FALSE
33	GTEx	Lung	RP11-196G11.2	0.21	0.12	enet	22	0.14	1.6e-10	-6.1	-5.3	1.4e-07	0.40	0.37	0.63	FALSE
31	GTEx	Heart Atrial Appendage	KAT8	0.12	0.02	lasso	4	0.01	1.6e-01	4.9	-5.2	1.7e-07	0.32	0.12	0.08	FALSE
24	GTEx	Esophagus Mucosa	STX1B	0.12	0.03	lasso	5	0.05	1.7e-04	-6.1	-5.2	2.6e-07	0.38	0.35	0.60	FALSE
3	GTEx	Adipose Visceral Omentum	KAT8	0.07	0.02	lasso	5	0.02	4.0e-02	5.1	-5.1	2.7e-07	0.18	0.38	0.04	FALSE
76	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	ZNF668	0.02	0.02	blup	32	0.02	2.9e-03	4.4	5.1	2.8e-07	-0.19	0.10	0.55	FALSE
16	GTEx	Breast Mammary Tissue	STX1B	0.08	0.00	enet	11	0.02	5.1e-02	-3.8	-5.1	2.9e-07	0.29	0.11	0.40	FALSE
72	The Cancer Genome Atlas	Breast Invasive Carcinoma	PRSS53	0.03	0.03	blup	38	0.02	6.8e-06	-6.1	5.1	2.9e-07	-0.23	0.01	0.99	FALSE