Best TWAS P=2.33e-36 · Best GWAS P=3.51e-33 conditioned to 0.046
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ATP5SL | 0.34 | 0.48 | bslmm | 365 | 0.48 | 1.5e-65 | 11.72 | -11.4 | 3.2e-30 | -0.99 | 0.01 | 0.99 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | BCKDHA | 0.12 | 0.08 | lasso | 6 | 0.10 | 8.9e-13 | 11.82 | -10.0 | 2.3e-23 | -0.95 | 0.02 | 0.98 | FALSE |
3 | GTEx | Adipose Subcutaneous | ETHE1 | 0.18 | 0.16 | lasso | 6 | 0.19 | 1.0e-15 | -3.13 | 5.4 | 6.3e-08 | 0.02 | 0.98 | 0.02 | FALSE |
4 | GTEx | Adipose Subcutaneous | ZNF575 | 0.38 | 0.48 | lasso | 5 | 0.48 | 1.3e-43 | 7.42 | 7.2 | 4.8e-13 | -0.02 | 0.01 | 0.99 | FALSE |
5 | GTEx | Adipose Subcutaneous | PHLDB3 | 0.16 | 0.13 | enet | 7 | 0.16 | 6.3e-13 | 3.59 | 5.6 | 1.8e-08 | 0.00 | 0.08 | 0.92 | FALSE |
6 | GTEx | Adipose Subcutaneous | PINLYP | 0.25 | 0.06 | lasso | 5 | 0.12 | 5.0e-10 | 7.26 | -7.8 | 6.0e-15 | -0.03 | 0.01 | 0.99 | FALSE |
7 | GTEx | Adipose Visceral Omentum | ZNF575 | 0.25 | 0.21 | lasso | 6 | 0.26 | 4.8e-14 | 7.42 | 6.6 | 4.9e-11 | -0.01 | 0.01 | 0.99 | FALSE |
8 | GTEx | Adipose Visceral Omentum | PINLYP | 0.17 | 0.10 | lasso | 6 | 0.09 | 1.8e-05 | 7.26 | -7.8 | 6.7e-15 | -0.01 | 0.01 | 0.99 | FALSE |
9 | GTEx | Adrenal Gland | XRCC1 | 0.28 | 0.12 | lasso | 3 | 0.15 | 4.6e-06 | 7.24 | 6.0 | 1.7e-09 | -0.01 | 0.01 | 0.99 | FALSE |
10 | GTEx | Adrenal Gland | ZNF575 | 0.17 | 0.06 | lasso | 5 | 0.09 | 4.0e-04 | 7.35 | 6.1 | 1.2e-09 | -0.03 | 0.01 | 0.97 | FALSE |
11 | GTEx | Artery Aorta | ATP5SL | 0.14 | 0.00 | lasso | 2 | 0.01 | 1.6e-01 | 11.27 | -11.3 | 2.0e-29 | -0.98 | 0.03 | 0.47 | FALSE |
12 | GTEx | Artery Aorta | ETHE1 | 0.20 | 0.12 | lasso | 6 | 0.14 | 4.9e-08 | -3.26 | 5.5 | 4.3e-08 | 0.02 | 0.46 | 0.53 | FALSE |
13 | GTEx | Artery Aorta | ZNF575 | 0.39 | 0.43 | lasso | 5 | 0.42 | 1.1e-24 | 7.42 | 7.3 | 2.3e-13 | -0.01 | 0.00 | 1.00 | FALSE |
14 | GTEx | Artery Aorta | B3GNT8 | 0.14 | 0.09 | lasso | 2 | 0.08 | 2.6e-05 | 11.60 | 10.4 | 2.0e-25 | 0.97 | 0.02 | 0.97 | FALSE |
15 | GTEx | Artery Aorta | PINLYP | 0.29 | 0.10 | lasso | 8 | 0.15 | 8.6e-09 | -3.44 | -6.5 | 5.7e-11 | -0.06 | 0.20 | 0.80 | FALSE |
16 | GTEx | Artery Aorta | CTC-435M10.6 | 0.16 | 0.14 | lasso | 3 | 0.13 | 1.3e-07 | 11.82 | 11.6 | 3.5e-31 | 0.99 | 0.02 | 0.98 | FALSE |
17 | GTEx | Artery Coronary | ZNF575 | 0.25 | 0.18 | enet | 12 | 0.17 | 2.5e-06 | 7.42 | 7.0 | 3.3e-12 | -0.01 | 0.01 | 0.99 | FALSE |
18 | GTEx | Artery Tibial | ETHE1 | 0.21 | 0.06 | enet | 19 | 0.14 | 2.9e-11 | 7.42 | 7.1 | 1.7e-12 | 0.02 | 0.01 | 0.99 | FALSE |
19 | GTEx | Artery Tibial | ZNF575 | 0.20 | 0.23 | lasso | 6 | 0.24 | 1.6e-18 | 7.42 | 6.7 | 2.9e-11 | -0.02 | 0.01 | 0.99 | FALSE |
20 | GTEx | Brain Cerebellar Hemisphere | B3GNT8 | 0.38 | 0.30 | lasso | 5 | 0.23 | 1.1e-06 | 11.60 | 11.6 | 7.0e-31 | 0.97 | 0.02 | 0.98 | FALSE |
21 | GTEx | Brain Cerebellar Hemisphere | PINLYP | 0.33 | 0.20 | lasso | 10 | 0.18 | 2.3e-05 | 7.35 | -7.8 | 4.7e-15 | 0.00 | 0.01 | 0.98 | FALSE |
22 | GTEx | Brain Cerebellar Hemisphere | CTC-435M10.6 | 0.29 | 0.20 | lasso | 4 | 0.18 | 2.6e-05 | 11.60 | 11.8 | 2.3e-32 | 0.99 | 0.01 | 0.97 | FALSE |
23 | GTEx | Brain Cerebellum | XRCC1 | 0.29 | 0.08 | lasso | 4 | 0.11 | 4.6e-04 | 4.53 | 6.2 | 6.4e-10 | 0.00 | 0.01 | 0.90 | FALSE |
24 | GTEx | Brain Cerebellum | B3GNT8 | 0.28 | 0.23 | lasso | 5 | 0.21 | 9.2e-07 | 11.60 | 11.6 | 3.8e-31 | 0.99 | 0.03 | 0.97 | FALSE |
25 | GTEx | Brain Cerebellum | PINLYP | 0.27 | 0.28 | lasso | 1 | 0.27 | 1.3e-08 | 7.35 | -7.3 | 2.0e-13 | 0.02 | 0.01 | 0.99 | FALSE |
26 | GTEx | Brain Cerebellum | CTC-435M10.6 | 0.18 | 0.01 | lasso | 4 | 0.03 | 5.1e-02 | 11.54 | 11.6 | 4.3e-31 | 0.88 | 0.03 | 0.78 | FALSE |
27 | GTEx | Brain Frontal Cortex BA9 | ATP5SL | 0.28 | 0.15 | lasso | 3 | 0.10 | 1.0e-03 | 11.47 | -11.4 | 3.7e-30 | -0.98 | 0.03 | 0.91 | FALSE |
28 | GTEx | Brain Hypothalamus | LYPD3 | 0.31 | 0.04 | lasso | 7 | 0.08 | 6.8e-03 | 3.59 | 5.8 | 7.8e-09 | 0.00 | 0.02 | 0.71 | FALSE |
29 | GTEx | Brain Nucleus accumbens basal ganglia | PHLDB3 | 0.24 | -0.01 | enet | 10 | -0.01 | 7.9e-01 | 4.53 | 5.4 | 5.4e-08 | 0.00 | 0.03 | 0.52 | FALSE |
30 | GTEx | Brain Nucleus accumbens basal ganglia | PINLYP | 0.26 | 0.15 | lasso | 2 | 0.13 | 2.1e-04 | 7.25 | -7.4 | 1.5e-13 | 0.01 | 0.01 | 0.89 | FALSE |
31 | GTEx | Brain Putamen basal ganglia | PINLYP | 0.46 | 0.14 | lasso | 7 | 0.25 | 1.0e-06 | -3.89 | -6.8 | 1.2e-11 | -0.01 | 0.02 | 0.95 | FALSE |
32 | GTEx | Breast Mammary Tissue | ZNF575 | 0.38 | 0.39 | enet | 23 | 0.41 | 2.5e-22 | 7.42 | 6.3 | 2.5e-10 | -0.01 | 0.01 | 0.99 | FALSE |
33 | GTEx | Breast Mammary Tissue | PINLYP | 0.20 | 0.06 | lasso | 8 | 0.11 | 2.9e-06 | -3.79 | -7.0 | 3.8e-12 | 0.00 | 0.02 | 0.97 | FALSE |
34 | GTEx | Breast Mammary Tissue (Male) | ZNF575 | 0.18 | 0.19 | lasso | 4 | 0.19 | 3.9e-05 | 5.91 | 6.7 | 1.8e-11 | 0.01 | 0.01 | 0.93 | FALSE |
35 | GTEx | Breast Mammary Tissue (Female) | ZNF575 | 0.40 | 0.26 | lasso | 10 | 0.29 | 3.3e-09 | 7.25 | 6.5 | 6.8e-11 | 0.00 | 0.01 | 0.99 | FALSE |
36 | GTEx | Cells EBV-transformed lymphocytes | ZNF575 | 0.19 | 0.11 | lasso | 7 | 0.05 | 7.5e-03 | 7.42 | 6.9 | 5.3e-12 | -0.01 | 0.01 | 0.95 | FALSE |
37 | GTEx | Cells Transformed fibroblasts | XRCC1 | 0.24 | 0.10 | lasso | 6 | 0.15 | 4.8e-11 | 2.93 | 5.6 | 2.2e-08 | -0.03 | 0.06 | 0.94 | FALSE |
38 | GTEx | Cells Transformed fibroblasts | ETHE1 | 0.31 | 0.26 | enet | 19 | 0.35 | 3.4e-27 | 5.91 | 7.3 | 2.4e-13 | 0.02 | 0.01 | 0.99 | FALSE |
39 | GTEx | Cells Transformed fibroblasts | TMEM91 | 0.08 | 0.00 | enet | 31 | 0.01 | 7.4e-02 | 4.09 | 6.9 | 5.5e-12 | 0.56 | 0.04 | 0.70 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | ZNF575 | 0.38 | 0.38 | enet | 37 | 0.39 | 1.4e-30 | 7.42 | 7.0 | 2.0e-12 | -0.02 | 0.00 | 1.00 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | B3GNT8 | 0.10 | 0.02 | lasso | 2 | 0.03 | 2.0e-03 | 11.27 | 11.3 | 1.7e-29 | 0.98 | 0.06 | 0.93 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | CTC-435M10.6 | 0.18 | 0.16 | lasso | 2 | 0.15 | 4.2e-11 | 11.27 | 11.2 | 5.8e-29 | 0.96 | 0.03 | 0.97 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | L34079.4 | 0.16 | 0.04 | enet | 35 | 0.07 | 8.4e-06 | 7.24 | 5.2 | 2.0e-07 | 0.07 | 0.01 | 0.99 | FALSE |
44 | GTEx | Colon Sigmoid | ZNF575 | 0.20 | 0.10 | lasso | 6 | 0.09 | 4.5e-04 | 5.91 | 6.5 | 7.8e-11 | 0.00 | 0.01 | 0.96 | FALSE |
45 | GTEx | Colon Sigmoid | PINLYP | 0.39 | 0.13 | lasso | 11 | 0.24 | 6.5e-09 | 7.26 | -7.2 | 7.9e-13 | 0.03 | 0.01 | 0.99 | FALSE |
46 | GTEx | Colon Transverse | B3GNT8 | 0.21 | 0.17 | lasso | 4 | 0.18 | 6.7e-09 | 11.45 | 11.2 | 5.7e-29 | 0.97 | 0.06 | 0.94 | FALSE |
47 | GTEx | Colon Transverse | PINLYP | 0.21 | 0.01 | enet | 19 | 0.06 | 1.1e-03 | -3.89 | -6.4 | 2.0e-10 | -0.05 | 0.36 | 0.38 | FALSE |
48 | GTEx | Colon Transverse | CTC-435M10.6 | 0.26 | 0.19 | enet | 19 | 0.22 | 5.8e-11 | 11.17 | 10.9 | 1.4e-27 | 0.91 | 0.04 | 0.96 | FALSE |
49 | GTEx | Esophagus Gastroesophageal Junction | ZNF575 | 0.23 | 0.18 | lasso | 7 | 0.16 | 1.4e-06 | 7.42 | 7.2 | 4.2e-13 | -0.01 | 0.01 | 0.99 | FALSE |
50 | GTEx | Esophagus Gastroesophageal Junction | PINLYP | 0.25 | 0.04 | lasso | 5 | 0.13 | 1.8e-05 | -3.79 | -6.8 | 9.9e-12 | 0.00 | 0.03 | 0.94 | FALSE |
51 | GTEx | Esophagus Gastroesophageal Junction | CTC-435M10.6 | 0.23 | 0.10 | enet | 17 | 0.10 | 1.7e-04 | 11.60 | 9.4 | 5.4e-21 | 0.87 | 0.04 | 0.91 | FALSE |
52 | GTEx | Esophagus Mucosa | XRCC1 | 0.11 | 0.00 | lasso | 2 | 0.00 | 5.5e-01 | 7.35 | 7.3 | 3.4e-13 | -0.01 | 0.02 | 0.79 | FALSE |
53 | GTEx | Esophagus Mucosa | PHLDB3 | 0.30 | 0.17 | lasso | 5 | 0.23 | 2.6e-15 | 5.91 | 6.1 | 1.2e-09 | 0.01 | 0.27 | 0.73 | FALSE |
54 | GTEx | Esophagus Mucosa | PINLYP | 0.23 | 0.17 | lasso | 6 | 0.16 | 4.1e-11 | 7.42 | -7.4 | 9.9e-14 | 0.00 | 0.01 | 0.99 | FALSE |
55 | GTEx | Esophagus Muscularis | ZNF575 | 0.19 | 0.05 | enet | 18 | 0.15 | 2.9e-09 | 2.35 | 5.7 | 1.2e-08 | 0.04 | 0.02 | 0.98 | FALSE |
56 | GTEx | Esophagus Muscularis | B3GNT8 | 0.14 | 0.10 | lasso | 2 | 0.16 | 7.5e-10 | -5.38 | 8.6 | 7.5e-18 | 0.90 | 0.03 | 0.97 | FALSE |
57 | GTEx | Esophagus Muscularis | PINLYP | 0.20 | 0.12 | lasso | 9 | 0.14 | 4.7e-09 | -3.82 | -6.3 | 3.6e-10 | -0.02 | 0.43 | 0.56 | FALSE |
58 | GTEx | Esophagus Muscularis | CTC-435M10.6 | 0.12 | 0.12 | lasso | 2 | 0.10 | 1.4e-06 | 10.95 | 10.8 | 3.5e-27 | 0.95 | 0.04 | 0.96 | FALSE |
59 | GTEx | Heart Atrial Appendage | TMEM91 | 0.12 | 0.05 | lasso | 4 | 0.08 | 1.7e-04 | 8.50 | 7.9 | 2.4e-15 | 0.58 | 0.04 | 0.71 | FALSE |
60 | GTEx | Heart Atrial Appendage | ZNF575 | 0.21 | 0.29 | lasso | 3 | 0.28 | 3.4e-13 | 7.42 | 7.4 | 1.2e-13 | -0.01 | 0.01 | 0.99 | FALSE |
61 | GTEx | Heart Left Ventricle | PHLDB3 | 0.14 | 0.02 | enet | 9 | 0.04 | 2.2e-03 | 5.91 | 6.0 | 1.6e-09 | 0.05 | 0.01 | 0.97 | FALSE |
62 | GTEx | Heart Left Ventricle | B3GNT8 | 0.27 | 0.04 | lasso | 7 | 0.06 | 3.9e-04 | -5.38 | 6.5 | 7.0e-11 | 0.77 | 0.04 | 0.95 | FALSE |
63 | GTEx | Heart Left Ventricle | CTC-435M10.6 | 0.18 | 0.02 | lasso | 4 | 0.06 | 4.8e-04 | 11.47 | 8.4 | 5.6e-17 | 0.83 | 0.02 | 0.97 | FALSE |
64 | GTEx | Lung | ZNF575 | 0.23 | 0.26 | enet | 19 | 0.26 | 6.9e-20 | 7.42 | 6.8 | 9.6e-12 | -0.02 | 0.01 | 0.99 | FALSE |
65 | GTEx | Lung | PINLYP | 0.24 | 0.13 | enet | 27 | 0.19 | 1.7e-14 | 7.35 | -7.6 | 2.3e-14 | -0.01 | 0.01 | 0.99 | FALSE |
66 | GTEx | Lung | CTC-435M10.6 | 0.13 | 0.11 | lasso | 3 | 0.10 | 3.3e-08 | 11.27 | 11.3 | 1.0e-29 | 0.98 | 0.05 | 0.95 | FALSE |
67 | GTEx | Muscle Skeletal | EXOSC5 | 0.07 | 0.03 | enet | 6 | 0.03 | 4.1e-04 | 11.54 | 11.7 | 1.2e-31 | 0.98 | 0.01 | 0.99 | FALSE |
68 | GTEx | Muscle Skeletal | ZNF575 | 0.07 | 0.05 | enet | 10 | 0.03 | 8.0e-04 | 7.42 | 7.4 | 1.0e-13 | 0.01 | 0.01 | 0.99 | FALSE |
69 | GTEx | Muscle Skeletal | PHLDB3 | 0.15 | 0.11 | lasso | 4 | 0.12 | 2.8e-12 | 3.59 | 5.5 | 2.9e-08 | 0.00 | 0.05 | 0.95 | FALSE |
70 | GTEx | Muscle Skeletal | PINLYP | 0.10 | 0.00 | enet | 13 | 0.02 | 7.3e-03 | -3.89 | -6.1 | 1.3e-09 | 0.00 | 0.06 | 0.90 | FALSE |
71 | GTEx | Nerve Tibial | ETHE1 | 0.09 | 0.05 | enet | 11 | 0.08 | 3.1e-06 | -3.26 | 6.0 | 2.5e-09 | 0.07 | 0.12 | 0.72 | FALSE |
72 | GTEx | Nerve Tibial | B9D2 | 0.13 | 0.08 | lasso | 4 | 0.06 | 2.9e-05 | 7.41 | 8.6 | 1.3e-17 | 0.73 | 0.08 | 0.84 | FALSE |
73 | GTEx | Nerve Tibial | ZNF575 | 0.36 | 0.41 | lasso | 12 | 0.44 | 9.1e-34 | 7.42 | 6.7 | 1.6e-11 | -0.02 | 0.01 | 0.99 | FALSE |
74 | GTEx | Nerve Tibial | B3GNT8 | 0.22 | 0.17 | enet | 12 | 0.20 | 6.6e-14 | 10.95 | 10.2 | 3.3e-24 | 0.96 | 0.03 | 0.97 | FALSE |
75 | GTEx | Nerve Tibial | PINLYP | 0.33 | 0.12 | lasso | 4 | 0.26 | 4.0e-18 | 7.24 | -7.9 | 3.6e-15 | -0.01 | 0.01 | 0.99 | FALSE |
76 | GTEx | Nerve Tibial | CTC-435M10.6 | 0.18 | 0.15 | lasso | 6 | 0.14 | 5.5e-10 | 10.95 | 11.5 | 1.8e-30 | 0.98 | 0.02 | 0.98 | FALSE |
77 | GTEx | Ovary | ZNF575 | 0.57 | 0.46 | lasso | 3 | 0.46 | 1.1e-12 | 7.25 | 7.2 | 4.8e-13 | -0.01 | 0.01 | 0.99 | FALSE |
78 | GTEx | Ovary | PINLYP | 0.36 | 0.25 | lasso | 6 | 0.31 | 1.8e-08 | 7.24 | -7.5 | 9.7e-14 | -0.02 | 0.01 | 0.98 | FALSE |
79 | GTEx | Pancreas | ZNF575 | 0.28 | 0.20 | lasso | 3 | 0.16 | 2.7e-07 | 7.42 | 7.4 | 1.2e-13 | -0.01 | 0.01 | 0.99 | FALSE |
80 | GTEx | Pancreas | CTC-435M10.6 | 0.24 | 0.00 | lasso | 4 | 0.01 | 1.7e-01 | 0.55 | 5.2 | 2.1e-07 | 0.30 | 0.21 | 0.33 | FALSE |
81 | GTEx | Pituitary | ZNF575 | 0.44 | 0.44 | lasso | 7 | 0.45 | 1.0e-12 | 7.42 | 7.0 | 2.6e-12 | -0.01 | 0.01 | 0.99 | FALSE |
82 | GTEx | Prostate | ZNF575 | 0.31 | 0.19 | lasso | 5 | 0.13 | 4.3e-04 | 7.25 | 7.4 | 1.6e-13 | -0.01 | 0.01 | 0.93 | FALSE |
83 | GTEx | Skin Not Sun Exposed Suprapubic | ZNF575 | 0.14 | 0.14 | enet | 13 | 0.16 | 6.1e-09 | 7.42 | 7.2 | 5.6e-13 | 0.02 | 0.01 | 0.99 | FALSE |
84 | GTEx | Skin Not Sun Exposed Suprapubic | PHLDB3 | 0.14 | 0.13 | lasso | 1 | 0.10 | 3.8e-06 | 5.30 | 5.3 | 1.1e-07 | 0.02 | 0.68 | 0.18 | FALSE |
85 | GTEx | Skin Sun Exposed Lower leg | ZNF575 | 0.16 | 0.20 | enet | 8 | 0.21 | 5.2e-17 | 7.42 | 6.8 | 7.6e-12 | -0.02 | 0.01 | 0.99 | FALSE |
86 | GTEx | Skin Sun Exposed Lower leg | PHLDB3 | 0.16 | 0.09 | lasso | 9 | 0.12 | 2.4e-10 | 5.30 | 5.7 | 1.5e-08 | 0.02 | 0.61 | 0.39 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | B3GNT8 | 0.11 | 0.04 | lasso | 6 | 0.05 | 1.1e-04 | -5.38 | 8.9 | 7.9e-19 | 0.92 | 0.02 | 0.97 | FALSE |
88 | GTEx | Skin Sun Exposed Lower leg | PINLYP | 0.17 | 0.16 | lasso | 3 | 0.17 | 4.9e-14 | 7.24 | -6.3 | 3.0e-10 | 0.01 | 0.01 | 0.99 | FALSE |
89 | GTEx | Spleen | ZNF575 | 0.32 | 0.22 | lasso | 7 | 0.31 | 1.2e-08 | 7.25 | 7.0 | 1.9e-12 | -0.01 | 0.01 | 0.98 | FALSE |
90 | GTEx | Stomach | ZNF575 | 0.21 | 0.14 | lasso | 8 | 0.13 | 1.0e-06 | 5.91 | 6.5 | 7.5e-11 | -0.01 | 0.01 | 0.99 | FALSE |
91 | GTEx | Stomach | B3GNT8 | 0.22 | 0.14 | lasso | 7 | 0.12 | 1.4e-06 | 11.45 | 11.2 | 3.2e-29 | 0.97 | 0.02 | 0.98 | FALSE |
92 | GTEx | Stomach | CTC-435M10.6 | 0.23 | 0.14 | lasso | 11 | 0.13 | 1.0e-06 | 10.95 | 10.5 | 7.0e-26 | 0.94 | 0.02 | 0.98 | FALSE |
93 | GTEx | Testis | XRCC1 | 0.39 | 0.39 | lasso | 10 | 0.43 | 1.3e-20 | 7.26 | 7.3 | 3.6e-13 | -0.01 | 0.01 | 0.99 | FALSE |
94 | GTEx | Testis | EXOSC5 | 0.31 | 0.33 | enet | 10 | 0.33 | 1.8e-15 | 11.47 | 11.5 | 1.3e-30 | 0.99 | 0.03 | 0.97 | FALSE |
95 | GTEx | Testis | MEGF8 | 0.13 | 0.07 | lasso | 12 | 0.04 | 8.1e-03 | -5.43 | 5.4 | 5.7e-08 | 0.05 | 0.11 | 0.21 | FALSE |
96 | GTEx | Testis | GRIK5 | 0.41 | 0.24 | lasso | 10 | 0.24 | 7.9e-11 | -6.26 | 6.3 | 2.8e-10 | 0.03 | 0.01 | 0.99 | FALSE |
97 | GTEx | Testis | ZNF575 | 0.31 | 0.30 | lasso | 10 | 0.29 | 2.3e-13 | 7.42 | 7.4 | 1.2e-13 | -0.01 | 0.01 | 0.99 | FALSE |
98 | GTEx | Testis | CTC-492K19.4 | 0.30 | 0.03 | enet | 44 | 0.03 | 1.1e-02 | 4.73 | -5.2 | 1.9e-07 | 0.09 | 0.03 | 0.76 | TRUE |
99 | GTEx | Testis | L34079.4 | 0.18 | 0.09 | lasso | 3 | 0.09 | 7.3e-05 | 7.35 | 5.9 | 4.7e-09 | -0.02 | 0.01 | 0.98 | FALSE |
100 | GTEx | Thyroid | EXOSC5 | 0.14 | 0.08 | lasso | 5 | 0.05 | 8.4e-05 | 11.36 | 11.0 | 4.0e-28 | 0.97 | 0.14 | 0.81 | FALSE |
101 | GTEx | Thyroid | ZNF575 | 0.28 | 0.25 | enet | 28 | 0.30 | 5.0e-23 | 7.42 | 7.0 | 2.9e-12 | 0.00 | 0.00 | 1.00 | FALSE |
102 | GTEx | Thyroid | B3GNT8 | 0.09 | 0.04 | enet | 17 | 0.03 | 1.4e-03 | 11.60 | 9.6 | 5.4e-22 | 0.84 | 0.01 | 0.97 | FALSE |
103 | GTEx | Thyroid | PINLYP | 0.14 | 0.08 | lasso | 6 | 0.11 | 6.1e-09 | -3.44 | -6.1 | 1.2e-09 | -0.03 | 0.24 | 0.76 | FALSE |
104 | GTEx | Thyroid | CTC-435M10.6 | 0.07 | 0.03 | lasso | 2 | 0.04 | 7.9e-04 | 11.60 | 9.4 | 4.0e-21 | 0.89 | 0.02 | 0.98 | FALSE |
105 | GTEx | Vagina | ZNF575 | 0.30 | 0.26 | lasso | 9 | 0.20 | 2.7e-05 | 7.42 | 7.3 | 3.4e-13 | -0.01 | 0.01 | 0.98 | FALSE |
106 | YFS | Blood | ATP5SL | 0.06 | 0.02 | lasso | 12 | 0.03 | 1.1e-09 | 11.87 | 10.9 | 1.1e-27 | 0.85 | 0.01 | 0.99 | FALSE |
107 | YFS | Blood | B9D2 | 0.03 | 0.02 | enet | 16 | 0.02 | 5.6e-07 | 8.50 | 7.4 | 1.7e-13 | 0.57 | 0.75 | 0.18 | FALSE |
108 | YFS | Blood | BCKDHA | 0.08 | 0.05 | enet | 27 | 0.06 | 1.9e-18 | 11.82 | -9.8 | 1.6e-22 | -0.89 | 0.02 | 0.98 | FALSE |
109 | YFS | Blood | TMEM91 | 0.50 | 0.05 | enet | 85 | 0.25 | 5.4e-82 | 3.69 | 6.9 | 4.0e-12 | 0.28 | 1.00 | 0.00 | FALSE |
110 | YFS | Blood | ZNF575 | 0.05 | 0.05 | lasso | 2 | 0.05 | 8.3e-15 | 7.35 | 7.0 | 3.5e-12 | -0.02 | 0.01 | 0.99 | FALSE |
111 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | B3GNT8 | 0.03 | 0.04 | blup | 20 | 0.04 | 3.2e-04 | 11.45 | 11.3 | 8.4e-30 | 0.99 | 0.01 | 0.96 | FALSE |
112 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | BCKDHA | 0.02 | 0.02 | lasso | 2 | 0.02 | 1.5e-02 | 11.59 | -11.5 | 1.2e-30 | -0.99 | 0.01 | 0.86 | FALSE |
113 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | PHLDB3 | 0.04 | 0.04 | lasso | 2 | 0.04 | 4.4e-04 | 5.30 | 6.0 | 2.3e-09 | 0.02 | 0.04 | 0.59 | FALSE |
114 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ZNF575 | 0.07 | 0.03 | blup | 66 | 0.06 | 1.2e-05 | 7.42 | 6.5 | 7.7e-11 | -0.01 | 0.01 | 0.99 | FALSE |
115 | The Cancer Genome Atlas | Breast Invasive Carcinoma | B3GNT8 | 0.04 | 0.07 | blup | 20 | 0.07 | 1.2e-13 | 11.23 | 11.0 | 5.1e-28 | 0.98 | 0.08 | 0.92 | FALSE |
116 | The Cancer Genome Atlas | Breast Invasive Carcinoma | B9D2 | 0.02 | 0.00 | enet | 13 | 0.01 | 1.9e-02 | 7.60 | 5.2 | 2.1e-07 | 0.68 | 0.01 | 0.60 | FALSE |
117 | The Cancer Genome Atlas | Breast Invasive Carcinoma | XRCC1 | 0.03 | 0.01 | lasso | 6 | 0.02 | 2.6e-05 | 7.24 | 6.0 | 2.2e-09 | -0.01 | 0.01 | 0.98 | FALSE |
118 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ZNF575 | 0.08 | 0.12 | lasso | 8 | 0.12 | 2.8e-23 | 7.40 | 7.4 | 1.7e-13 | -0.01 | 0.00 | 1.00 | FALSE |
119 | The Cancer Genome Atlas | Colon Adenocarcinoma | B3GNT8 | 0.09 | 0.13 | blup | 20 | 0.11 | 5.2e-07 | 10.95 | 10.8 | 3.1e-27 | 0.98 | 0.02 | 0.98 | FALSE |
120 | The Cancer Genome Atlas | Colon Adenocarcinoma | B9D2 | 0.08 | 0.05 | blup | 37 | 0.08 | 3.4e-05 | 7.63 | 6.3 | 3.3e-10 | 0.62 | 0.20 | 0.36 | FALSE |
121 | The Cancer Genome Atlas | Esophageal Carcinoma | XRCC1 | 0.14 | 0.01 | blup | 76 | 0.02 | 8.3e-02 | 7.35 | 7.5 | 7.7e-14 | 0.00 | 0.01 | 0.76 | FALSE |
122 | The Cancer Genome Atlas | Esophageal Carcinoma | ZNF575 | 0.21 | 0.18 | lasso | 4 | 0.15 | 1.7e-05 | 5.30 | 5.8 | 8.0e-09 | 0.03 | 0.07 | 0.73 | FALSE |
123 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | BCKDHA | 0.03 | 0.03 | enet | 4 | 0.03 | 1.8e-04 | -5.38 | -6.2 | 5.4e-10 | -0.77 | 0.03 | 0.77 | FALSE |
124 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | DEDD2 | 0.02 | 0.02 | lasso | 1 | 0.01 | 3.1e-02 | -6.26 | 6.3 | 3.9e-10 | 0.03 | 0.01 | 0.94 | FALSE |
125 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PHLDB3 | 0.08 | 0.07 | blup | 58 | 0.07 | 5.4e-08 | 3.59 | 5.2 | 2.2e-07 | 0.02 | 0.11 | 0.89 | FALSE |
126 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ZNF575 | 0.08 | 0.08 | lasso | 4 | 0.08 | 4.8e-09 | 7.25 | 7.2 | 6.1e-13 | -0.01 | 0.01 | 0.99 | FALSE |
127 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ATP5SL | 0.04 | 0.03 | enet | 12 | 0.03 | 1.6e-04 | 12.00 | -10.2 | 1.6e-24 | -0.92 | 0.00 | 0.99 | FALSE |
128 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ETHE1 | 0.09 | 0.08 | blup | 69 | 0.09 | 3.3e-10 | -3.13 | 5.2 | 1.9e-07 | 0.04 | 1.00 | 0.00 | FALSE |
129 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | GSK3A | 0.03 | 0.00 | blup | 20 | 0.01 | 1.4e-02 | -5.20 | -5.6 | 2.2e-08 | -0.04 | 0.00 | 0.16 | FALSE |
130 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PHLDB3 | 0.14 | 0.04 | blup | 58 | 0.09 | 3.9e-10 | 3.59 | 5.5 | 4.8e-08 | 0.00 | 0.16 | 0.84 | FALSE |
131 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | XRCC1 | 0.15 | 0.11 | blup | 76 | 0.13 | 2.3e-14 | 7.29 | 5.3 | 1.2e-07 | -0.03 | 0.01 | 0.99 | FALSE |
132 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ZNF575 | 0.15 | 0.16 | lasso | 6 | 0.19 | 1.1e-20 | 7.26 | 6.5 | 1.2e-10 | -0.01 | 0.01 | 0.99 | FALSE |
133 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ZNF575 | 0.12 | 0.00 | blup | 65 | 0.11 | 4.7e-07 | 2.92 | 6.0 | 1.9e-09 | 0.01 | 0.02 | 0.97 | FALSE |
134 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ATP5SL | 0.02 | 0.03 | enet | 4 | 0.02 | 7.0e-04 | 11.54 | -11.5 | 1.7e-30 | -0.99 | 0.02 | 0.87 | FALSE |
135 | The Cancer Genome Atlas | Brain Lower Grade Glioma | EXOSC5 | 0.04 | 0.03 | lasso | 2 | 0.02 | 5.8e-03 | 11.60 | 11.1 | 1.2e-28 | 0.95 | 0.01 | 0.62 | FALSE |
136 | The Cancer Genome Atlas | Brain Lower Grade Glioma | XRCC1 | 0.07 | 0.06 | lasso | 6 | 0.10 | 3.4e-11 | 2.75 | 5.4 | 6.1e-08 | -0.03 | 0.03 | 0.97 | FALSE |
137 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ZNF575 | 0.03 | 0.01 | blup | 65 | 0.02 | 8.0e-04 | -2.82 | 6.6 | 3.9e-11 | 0.01 | 0.05 | 0.67 | FALSE |
138 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | ZNF575 | 0.17 | 0.02 | blup | 65 | 0.05 | 1.4e-03 | -3.36 | 6.0 | 2.7e-09 | 0.00 | 0.02 | 0.59 | FALSE |
139 | The Cancer Genome Atlas | Lung Adenocarcinoma | ETHE1 | 0.07 | 0.04 | blup | 68 | 0.04 | 1.9e-05 | -3.26 | 5.4 | 5.4e-08 | 0.03 | 0.80 | 0.06 | FALSE |
140 | The Cancer Genome Atlas | Lung Adenocarcinoma | XRCC1 | 0.04 | 0.03 | enet | 5 | 0.04 | 4.0e-05 | 7.38 | 6.0 | 1.5e-09 | -0.03 | 0.01 | 0.97 | FALSE |
141 | The Cancer Genome Atlas | Lung Adenocarcinoma | ZNF575 | 0.09 | 0.10 | lasso | 5 | 0.11 | 1.4e-12 | 7.40 | 7.5 | 6.0e-14 | -0.01 | 0.01 | 0.99 | FALSE |
142 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | ZNF575 | 0.04 | 0.05 | blup | 66 | 0.04 | 8.4e-06 | 7.38 | 7.2 | 6.2e-13 | 0.00 | 0.01 | 0.99 | FALSE |
143 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | B3GNT8 | 0.04 | 0.03 | lasso | 3 | 0.02 | 1.8e-02 | -5.38 | 5.9 | 3.7e-09 | 0.75 | 0.02 | 0.53 | FALSE |
144 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | ZNF575 | 0.20 | 0.03 | blup | 65 | 0.12 | 2.6e-08 | -0.31 | 5.4 | 5.3e-08 | 0.03 | 0.04 | 0.95 | FALSE |
145 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | B3GNT8 | 0.15 | 0.12 | blup | 20 | 0.12 | 1.3e-05 | -5.38 | 8.6 | 6.5e-18 | 0.90 | 0.03 | 0.94 | FALSE |
146 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ZNF575 | 0.27 | 0.18 | blup | 65 | 0.19 | 1.5e-08 | 7.26 | 7.5 | 4.9e-14 | 0.00 | 0.01 | 0.99 | FALSE |
147 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | ATP5SL | 0.23 | 0.05 | blup | 18 | 0.05 | 4.5e-03 | 12.00 | -12.6 | 2.3e-36 | -0.90 | 0.01 | 0.88 | TRUE |
148 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | ETHE1 | 0.11 | 0.02 | blup | 69 | 0.08 | 4.2e-04 | -3.00 | 6.3 | 2.6e-10 | 0.02 | 0.02 | 0.79 | FALSE |
149 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | ZNF575 | 0.17 | 0.13 | blup | 66 | 0.12 | 2.4e-05 | 7.42 | 8.1 | 5.7e-16 | 0.01 | 0.01 | 0.98 | TRUE |
150 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ATP5SL | 0.03 | 0.03 | blup | 18 | 0.03 | 4.1e-04 | 12.00 | -11.7 | 8.4e-32 | -0.99 | 0.01 | 0.96 | FALSE |
151 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PHLDB3 | 0.35 | 0.31 | enet | 16 | 0.39 | 3.4e-43 | 5.30 | 5.8 | 8.0e-09 | 0.02 | 1.00 | 0.00 | FALSE |
152 | The Cancer Genome Atlas | Prostate Adenocarcinoma | XRCC1 | 0.22 | 0.20 | lasso | 6 | 0.23 | 2.4e-23 | 2.75 | 5.4 | 6.8e-08 | -0.02 | 0.44 | 0.56 | FALSE |
153 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ZNF575 | 0.21 | 0.20 | lasso | 6 | 0.19 | 1.1e-19 | 7.38 | 7.5 | 9.5e-14 | -0.01 | 0.00 | 1.00 | FALSE |
154 | The Cancer Genome Atlas | Rectum Adenocarcinoma | B3GNT8 | 0.39 | 0.08 | blup | 20 | 0.07 | 1.1e-02 | 11.59 | 10.0 | 1.2e-23 | 0.85 | 0.00 | 0.28 | FALSE |
155 | The Cancer Genome Atlas | Rectum Adenocarcinoma | GSK3A | 0.15 | 0.10 | lasso | 7 | 0.09 | 4.0e-03 | -6.34 | -6.3 | 2.3e-10 | -0.02 | 0.00 | 0.54 | TRUE |
156 | The Cancer Genome Atlas | Soft Tissue Sarcoma | ZNF575 | 0.09 | 0.09 | lasso | 4 | 0.06 | 1.5e-04 | 7.24 | 6.9 | 5.3e-12 | -0.01 | 0.01 | 0.98 | FALSE |
157 | The Cancer Genome Atlas | Stomach Adenocarcinoma | PHLDB3 | 0.07 | 0.05 | lasso | 1 | 0.04 | 9.0e-04 | 7.40 | 7.4 | 1.3e-13 | -0.01 | 0.00 | 0.97 | FALSE |
158 | The Cancer Genome Atlas | Stomach Adenocarcinoma | ZNF575 | 0.05 | 0.06 | lasso | 2 | 0.04 | 4.7e-04 | 7.38 | 7.4 | 1.4e-13 | -0.01 | 0.01 | 0.96 | FALSE |
159 | The Cancer Genome Atlas | Thyroid Carcinoma | ATP5SL | 0.02 | 0.02 | blup | 18 | 0.02 | 3.5e-03 | 12.00 | -11.4 | 5.2e-30 | -0.99 | 0.01 | 0.85 | FALSE |
160 | The Cancer Genome Atlas | Thyroid Carcinoma | B3GNT8 | 0.10 | 0.12 | lasso | 3 | 0.11 | 1.3e-10 | 11.54 | 10.3 | 7.6e-25 | 0.97 | 0.06 | 0.94 | FALSE |
161 | The Cancer Genome Atlas | Thyroid Carcinoma | EXOSC5 | 0.02 | 0.01 | blup | 31 | 0.03 | 4.5e-04 | 11.27 | 10.3 | 9.1e-25 | 0.96 | 0.01 | 0.95 | FALSE |
162 | The Cancer Genome Atlas | Thyroid Carcinoma | PAFAH1B3 | 0.02 | 0.01 | blup | 16 | 0.02 | 6.7e-03 | -5.27 | -5.5 | 4.8e-08 | -0.05 | 0.01 | 0.72 | FALSE |
163 | The Cancer Genome Atlas | Thyroid Carcinoma | ZNF575 | 0.23 | 0.22 | blup | 66 | 0.25 | 1.7e-24 | 7.40 | 7.3 | 3.8e-13 | 0.01 | 0.01 | 0.99 | FALSE |
164 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | PHLDB3 | 0.18 | 0.06 | blup | 57 | 0.10 | 8.3e-04 | 5.91 | 6.2 | 6.9e-10 | 0.03 | 0.01 | 0.84 | FALSE |