Best TWAS P=2.07e-63 · Best GWAS P=1.39e-60 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CHURC1 | 0.45 | 0.56 | enet | 22 | 0.56 | 2.4e-83 | -5.99 | -6.1 | 1.3e-09 | 0.30 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | MAX | 0.15 | 0.16 | lasso | 2 | 0.16 | 1.2e-18 | -14.73 | 14.7 | 4.9e-49 | -0.80 | 0.98 | 0.02 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | MTHFD1 | 0.07 | 0.06 | enet | 46 | 0.04 | 7.2e-06 | 6.62 | 6.6 | 3.8e-11 | -0.05 | 0.96 | 0.02 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | SPTB | 0.06 | 0.05 | bslmm | 528 | 0.05 | 9.5e-07 | -4.19 | 8.5 | 1.4e-17 | -0.38 | 0.73 | 0.19 | FALSE |
5 | GTEx | Adipose Subcutaneous | MTHFD1 | 0.11 | 0.13 | enet | 13 | 0.12 | 5.6e-10 | -7.22 | 7.6 | 2.1e-14 | 0.03 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | ZBTB1 | 0.11 | 0.04 | lasso | 7 | 0.05 | 6.2e-05 | 4.84 | -6.5 | 8.8e-11 | 0.10 | 0.45 | 0.02 | FALSE |
7 | GTEx | Adipose Subcutaneous | RAB15 | 0.48 | 0.07 | enet | 82 | 0.18 | 5.7e-15 | -0.66 | -8.8 | 1.8e-18 | 0.31 | 0.99 | 0.01 | FALSE |
8 | GTEx | Adipose Subcutaneous | CHURC1 | 0.41 | 0.27 | lasso | 9 | 0.42 | 2.2e-36 | -7.94 | 7.8 | 8.1e-15 | -0.39 | 1.00 | 0.00 | FALSE |
9 | GTEx | Adipose Subcutaneous | CTD-2555O16.2 | 0.09 | 0.09 | enet | 11 | 0.07 | 5.1e-06 | -7.22 | 8.1 | 7.4e-16 | 0.02 | 0.98 | 0.01 | FALSE |
10 | GTEx | Adipose Subcutaneous | CTD-2555O16.4 | 0.11 | 0.10 | enet | 18 | 0.08 | 3.8e-07 | -7.22 | 8.4 | 3.8e-17 | -0.03 | 0.99 | 0.00 | FALSE |
11 | GTEx | Adipose Visceral Omentum | RAB15 | 0.38 | 0.01 | enet | 31 | 0.10 | 4.7e-06 | -0.66 | -5.1 | 2.9e-07 | 0.18 | 0.27 | 0.19 | TRUE |
12 | GTEx | Adipose Visceral Omentum | CHURC1 | 0.40 | 0.37 | lasso | 5 | 0.39 | 3.0e-21 | -7.01 | 8.0 | 1.6e-15 | -0.39 | 1.00 | 0.00 | FALSE |
13 | GTEx | Adrenal Gland | MTHFD1 | 0.14 | 0.04 | lasso | 4 | 0.03 | 2.7e-02 | -7.21 | 6.9 | 5.1e-12 | 0.05 | 0.20 | 0.05 | FALSE |
14 | GTEx | Adrenal Gland | CHURC1 | 0.50 | 0.40 | lasso | 11 | 0.42 | 1.1e-16 | -7.94 | 7.7 | 1.5e-14 | -0.39 | 1.00 | 0.00 | FALSE |
15 | GTEx | Artery Aorta | SPTB | 0.13 | 0.00 | enet | 11 | 0.01 | 9.0e-02 | -2.67 | -8.2 | 3.1e-16 | 0.37 | 0.08 | 0.05 | FALSE |
16 | GTEx | Artery Aorta | MTHFD1 | 0.24 | 0.18 | lasso | 6 | 0.20 | 1.9e-11 | -6.47 | 7.6 | 4.2e-14 | 0.04 | 0.99 | 0.01 | FALSE |
17 | GTEx | Artery Aorta | ZBTB1 | 0.13 | 0.02 | enet | 17 | 0.06 | 3.4e-04 | 4.44 | -5.7 | 1.1e-08 | 0.07 | 0.44 | 0.03 | FALSE |
18 | GTEx | Artery Aorta | RAB15 | 0.13 | 0.08 | lasso | 6 | 0.04 | 3.6e-03 | -5.99 | -6.0 | 1.5e-09 | 0.28 | 0.36 | 0.06 | FALSE |
19 | GTEx | Artery Aorta | CHURC1 | 0.45 | 0.35 | lasso | 11 | 0.48 | 7.4e-30 | -7.01 | 7.6 | 3.6e-14 | -0.38 | 1.00 | 0.00 | FALSE |
20 | GTEx | Artery Aorta | CTD-2555O16.2 | 0.10 | 0.09 | enet | 9 | 0.04 | 1.9e-03 | -7.22 | 7.6 | 2.5e-14 | 0.04 | 0.51 | 0.09 | FALSE |
21 | GTEx | Artery Aorta | CTD-2555O16.4 | 0.21 | 0.07 | enet | 15 | 0.16 | 4.8e-09 | -7.25 | 6.7 | 1.8e-11 | -0.03 | 0.77 | 0.02 | FALSE |
22 | GTEx | Artery Coronary | CHURC1 | 0.58 | 0.22 | lasso | 8 | 0.48 | 1.7e-18 | -7.01 | 7.9 | 3.7e-15 | -0.37 | 1.00 | 0.00 | FALSE |
23 | GTEx | Artery Tibial | SPTB | 0.14 | 0.07 | lasso | 6 | 0.05 | 1.6e-04 | -5.99 | -6.5 | 1.1e-10 | 0.28 | 0.86 | 0.00 | FALSE |
24 | GTEx | Artery Tibial | MTHFD1 | 0.29 | 0.23 | enet | 21 | 0.24 | 3.3e-19 | -7.25 | 8.5 | 1.5e-17 | 0.01 | 1.00 | 0.00 | FALSE |
25 | GTEx | Artery Tibial | CHURC1 | 0.43 | 0.37 | lasso | 12 | 0.53 | 2.0e-48 | -7.94 | 7.8 | 8.7e-15 | -0.38 | 1.00 | 0.00 | FALSE |
26 | GTEx | Artery Tibial | CTD-2555O16.2 | 0.17 | 0.12 | enet | 21 | 0.11 | 3.8e-09 | -7.47 | 8.2 | 3.6e-16 | -0.01 | 0.99 | 0.01 | FALSE |
27 | GTEx | Artery Tibial | CTD-2555O16.4 | 0.14 | 0.09 | enet | 15 | 0.07 | 3.0e-06 | -7.47 | 8.2 | 1.6e-16 | 0.01 | 0.96 | 0.04 | FALSE |
28 | GTEx | Brain Caudate basal ganglia | CHURC1 | 0.31 | 0.17 | lasso | 4 | 0.29 | 5.5e-09 | -4.20 | 6.3 | 3.3e-10 | -0.34 | 0.83 | 0.02 | FALSE |
29 | GTEx | Brain Cerebellar Hemisphere | CHURC1 | 0.22 | 0.10 | lasso | 3 | 0.16 | 5.2e-05 | -7.01 | 6.5 | 6.0e-11 | -0.34 | 0.29 | 0.05 | TRUE |
30 | GTEx | Brain Cerebellum | MTHFD1 | 0.31 | 0.00 | enet | 35 | 0.16 | 2.1e-05 | 0.72 | 6.3 | 2.8e-10 | -0.07 | 0.11 | 0.19 | FALSE |
31 | GTEx | Brain Cerebellum | CHURC1 | 0.39 | 0.16 | lasso | 4 | 0.18 | 5.3e-06 | -6.04 | 7.0 | 2.5e-12 | -0.34 | 0.60 | 0.07 | FALSE |
32 | GTEx | Brain Cortex | CHURC1 | 0.60 | 0.22 | lasso | 12 | 0.41 | 1.5e-12 | -8.11 | 7.2 | 5.8e-13 | -0.37 | 0.98 | 0.00 | FALSE |
33 | GTEx | Brain Frontal Cortex BA9 | CHURC1 | 0.53 | 0.32 | lasso | 10 | 0.37 | 1.0e-10 | -6.06 | 6.2 | 6.8e-10 | -0.31 | 0.98 | 0.00 | FALSE |
34 | GTEx | Brain Hippocampus | CHURC1 | 0.32 | 0.03 | enet | 9 | 0.08 | 5.3e-03 | -8.04 | 8.1 | 6.5e-16 | -0.36 | 0.12 | 0.31 | FALSE |
35 | GTEx | Brain Hypothalamus | CHURC1 | 0.57 | 0.24 | enet | 29 | 0.29 | 1.4e-07 | -6.04 | 6.6 | 4.0e-11 | -0.29 | 0.76 | 0.02 | FALSE |
36 | GTEx | Brain Nucleus accumbens basal ganglia | CHURC1 | 0.45 | 0.20 | lasso | 8 | 0.34 | 9.2e-10 | -7.01 | 6.5 | 6.9e-11 | -0.33 | 0.84 | 0.03 | FALSE |
37 | GTEx | Brain Putamen basal ganglia | CHURC1 | 0.60 | 0.27 | lasso | 9 | 0.32 | 3.0e-08 | -7.94 | 7.1 | 1.6e-12 | -0.36 | 0.74 | 0.03 | FALSE |
38 | GTEx | Breast Mammary Tissue | MTHFD1 | 0.11 | 0.13 | enet | 10 | 0.05 | 1.8e-03 | -7.22 | 7.8 | 4.6e-15 | 0.00 | 0.85 | 0.03 | FALSE |
39 | GTEx | Breast Mammary Tissue | CHURC1 | 0.41 | 0.32 | lasso | 13 | 0.36 | 3.7e-19 | -7.01 | 7.3 | 2.5e-13 | -0.35 | 1.00 | 0.00 | FALSE |
40 | GTEx | Breast Mammary Tissue (Male) | MTHFD1 | 0.17 | 0.03 | lasso | 3 | 0.04 | 4.1e-02 | -7.22 | 9.5 | 2.9e-21 | 0.00 | 0.06 | 0.13 | FALSE |
41 | GTEx | Breast Mammary Tissue (Male) | CHURC1 | 0.26 | 0.22 | lasso | 4 | 0.20 | 2.4e-05 | -5.10 | 5.8 | 7.6e-09 | -0.29 | 0.14 | 0.10 | FALSE |
42 | GTEx | Breast Mammary Tissue (Male) | CTD-2555O16.4 | 0.18 | -0.01 | enet | 10 | 0.02 | 9.6e-02 | -7.22 | 8.4 | 3.4e-17 | 0.00 | 0.06 | 0.10 | FALSE |
43 | GTEx | Breast Mammary Tissue (Female) | CHURC1 | 0.37 | 0.23 | enet | 25 | 0.30 | 1.9e-09 | -7.01 | 6.4 | 1.5e-10 | -0.28 | 0.81 | 0.01 | TRUE |
44 | GTEx | Cells EBV-transformed lymphocytes | CHURC1 | 0.62 | 0.34 | lasso | 12 | 0.50 | 1.7e-18 | -5.99 | 7.1 | 1.1e-12 | -0.36 | 1.00 | 0.00 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | MTHFD1 | 0.07 | 0.00 | enet | 29 | 0.03 | 1.4e-03 | 4.34 | 6.3 | 2.7e-10 | -0.10 | 0.17 | 0.07 | FALSE |
46 | GTEx | Cells Transformed fibroblasts | RAB15 | 0.64 | 0.08 | enet | 41 | 0.33 | 1.3e-25 | -6.28 | -9.4 | 6.0e-21 | 0.45 | 1.00 | 0.00 | FALSE |
47 | GTEx | Cells Transformed fibroblasts | CHURC1 | 0.53 | 0.46 | enet | 32 | 0.55 | 3.3e-48 | -7.01 | 7.2 | 8.7e-13 | -0.37 | 1.00 | 0.00 | FALSE |
48 | GTEx | Colon Sigmoid | CHURC1 | 0.47 | 0.31 | lasso | 12 | 0.30 | 3.1e-11 | -7.01 | 7.4 | 1.3e-13 | -0.36 | 0.99 | 0.00 | FALSE |
49 | GTEx | Colon Transverse | MTHFD1 | 0.20 | 0.01 | enet | 49 | 0.02 | 6.2e-02 | -6.26 | 10.0 | 1.5e-23 | -0.12 | 0.19 | 0.19 | TRUE |
50 | GTEx | Colon Transverse | CHURC1 | 0.50 | 0.38 | lasso | 8 | 0.39 | 7.1e-20 | -7.01 | 7.7 | 9.9e-15 | -0.37 | 1.00 | 0.00 | FALSE |
51 | GTEx | Esophagus Gastroesophageal Junction | RAB15 | 0.20 | 0.13 | lasso | 13 | 0.16 | 2.4e-06 | -5.99 | -9.2 | 2.6e-20 | 0.45 | 0.60 | 0.28 | FALSE |
52 | GTEx | Esophagus Gastroesophageal Junction | CHURC1 | 0.40 | 0.40 | lasso | 6 | 0.43 | 2.9e-17 | -8.36 | 8.4 | 4.8e-17 | -0.41 | 1.00 | 0.00 | FALSE |
53 | GTEx | Esophagus Mucosa | MTHFD1 | 0.09 | 0.00 | enet | 25 | 0.02 | 3.2e-02 | 2.14 | 6.0 | 2.4e-09 | -0.01 | 0.08 | 0.19 | FALSE |
54 | GTEx | Esophagus Mucosa | RAB15 | 0.23 | 0.04 | enet | 41 | 0.14 | 1.2e-09 | -6.06 | -6.8 | 7.7e-12 | 0.31 | 0.82 | 0.06 | FALSE |
55 | GTEx | Esophagus Mucosa | CHURC1 | 0.45 | 0.30 | enet | 40 | 0.46 | 1.6e-33 | -7.01 | 7.6 | 2.7e-14 | -0.35 | 1.00 | 0.00 | FALSE |
56 | GTEx | Esophagus Mucosa | CTD-2555O16.2 | 0.08 | 0.00 | enet | 15 | 0.03 | 2.9e-03 | 6.46 | 9.7 | 3.8e-22 | -0.07 | 0.22 | 0.08 | FALSE |
57 | GTEx | Esophagus Muscularis | MTHFD1 | 0.11 | 0.04 | enet | 9 | 0.03 | 6.6e-03 | -7.22 | 9.4 | 3.8e-21 | -0.02 | 0.18 | 0.14 | FALSE |
58 | GTEx | Esophagus Muscularis | PLEKHG3 | 0.21 | 0.03 | enet | 19 | 0.03 | 4.5e-03 | 5.84 | 7.5 | 5.1e-14 | -0.15 | 0.92 | 0.00 | FALSE |
59 | GTEx | Esophagus Muscularis | RAB15 | 0.35 | 0.06 | enet | 23 | 0.17 | 1.2e-10 | -6.28 | -11.3 | 9.7e-30 | 0.50 | 1.00 | 0.00 | FALSE |
60 | GTEx | Esophagus Muscularis | CHURC1 | 0.51 | 0.38 | lasso | 10 | 0.49 | 1.4e-33 | -7.94 | 7.7 | 2.1e-14 | -0.38 | 1.00 | 0.00 | FALSE |
61 | GTEx | Heart Atrial Appendage | CHURC1 | 0.50 | 0.34 | lasso | 12 | 0.40 | 3.1e-19 | -7.01 | 7.0 | 3.0e-12 | -0.35 | 1.00 | 0.00 | FALSE |
62 | GTEx | Heart Left Ventricle | SYNE2 | 0.20 | 0.14 | lasso | 5 | 0.09 | 1.6e-05 | 7.33 | -8.1 | 3.9e-16 | 0.01 | 0.55 | 0.39 | FALSE |
63 | GTEx | Heart Left Ventricle | CHURC1 | 0.31 | 0.21 | lasso | 13 | 0.28 | 2.3e-15 | -7.01 | 8.2 | 3.0e-16 | -0.39 | 1.00 | 0.00 | FALSE |
64 | GTEx | Liver | CHURC1 | 0.27 | 0.19 | enet | 31 | 0.17 | 2.1e-05 | -6.04 | 6.7 | 2.7e-11 | -0.31 | 0.55 | 0.07 | FALSE |
65 | GTEx | Lung | MTHFD1 | 0.12 | 0.12 | enet | 17 | 0.08 | 7.6e-07 | -7.21 | 9.0 | 3.2e-19 | 0.02 | 1.00 | 0.00 | FALSE |
66 | GTEx | Lung | PLEKHG3 | 0.16 | 0.04 | lasso | 3 | 0.09 | 3.8e-07 | 4.40 | 5.8 | 6.8e-09 | -0.01 | 0.61 | 0.04 | FALSE |
67 | GTEx | Lung | CHURC1 | 0.43 | 0.46 | lasso | 13 | 0.50 | 4.9e-43 | -7.01 | 7.3 | 3.7e-13 | -0.36 | 1.00 | 0.00 | FALSE |
68 | GTEx | Muscle Skeletal | FNTB | 0.05 | 0.02 | lasso | 6 | 0.01 | 5.8e-02 | -13.20 | 13.8 | 4.5e-43 | -0.75 | 0.12 | 0.75 | FALSE |
69 | GTEx | Muscle Skeletal | CHURC1 | 0.21 | 0.18 | lasso | 5 | 0.22 | 7.9e-22 | -7.01 | 7.7 | 1.6e-14 | -0.37 | 1.00 | 0.00 | FALSE |
70 | GTEx | Nerve Tibial | MTHFD1 | 0.31 | 0.28 | enet | 13 | 0.29 | 1.2e-20 | -7.21 | 7.9 | 2.3e-15 | 0.04 | 1.00 | 0.00 | FALSE |
71 | GTEx | Nerve Tibial | RAB15 | 0.35 | 0.15 | enet | 68 | 0.18 | 4.7e-13 | -12.49 | -7.5 | 6.5e-14 | 0.43 | 1.00 | 0.00 | FALSE |
72 | GTEx | Nerve Tibial | CHURC1 | 0.41 | 0.33 | enet | 37 | 0.41 | 2.3e-31 | -7.01 | 6.5 | 6.3e-11 | -0.31 | 1.00 | 0.00 | FALSE |
73 | GTEx | Nerve Tibial | CTD-2555O16.2 | 0.15 | 0.11 | enet | 9 | 0.08 | 3.2e-06 | -7.21 | 7.6 | 2.1e-14 | 0.05 | 0.99 | 0.00 | FALSE |
74 | GTEx | Nerve Tibial | CTD-2555O16.4 | 0.09 | 0.06 | lasso | 6 | 0.04 | 7.7e-04 | 5.62 | 7.1 | 9.1e-13 | 0.00 | 0.32 | 0.09 | FALSE |
75 | GTEx | Ovary | MTHFD1 | 0.28 | 0.27 | enet | 35 | 0.25 | 6.5e-07 | -7.25 | 5.5 | 2.8e-08 | 0.04 | 0.28 | 0.59 | FALSE |
76 | GTEx | Ovary | CHURC1 | 0.48 | 0.27 | enet | 16 | 0.24 | 1.1e-06 | -7.01 | 9.4 | 7.4e-21 | -0.42 | 0.38 | 0.14 | FALSE |
77 | GTEx | Ovary | CTD-2555O16.2 | 0.23 | 0.10 | enet | 26 | 0.18 | 2.7e-05 | -7.25 | 5.9 | 4.0e-09 | 0.02 | 0.24 | 0.43 | FALSE |
78 | GTEx | Pancreas | MTHFD1 | 0.24 | 0.28 | lasso | 2 | 0.26 | 1.3e-11 | -6.52 | 6.5 | 7.1e-11 | 0.06 | 1.00 | 0.00 | FALSE |
79 | GTEx | Pancreas | CTD-2555O16.4 | 0.20 | 0.23 | enet | 12 | 0.25 | 7.0e-11 | -6.52 | 5.9 | 4.1e-09 | 0.07 | 1.00 | 0.00 | FALSE |
80 | GTEx | Pituitary | RAB15 | 0.32 | 0.03 | enet | 16 | 0.10 | 1.9e-03 | -13.90 | -12.4 | 1.5e-35 | 0.70 | 0.05 | 0.82 | FALSE |
81 | GTEx | Pituitary | CHURC1 | 0.51 | 0.29 | lasso | 9 | 0.33 | 3.8e-09 | -6.03 | 6.9 | 5.2e-12 | -0.33 | 0.91 | 0.02 | FALSE |
82 | GTEx | Prostate | MTHFD1 | 0.36 | 0.04 | enet | 30 | 0.09 | 3.2e-03 | -7.20 | 8.7 | 2.8e-18 | -0.09 | 0.15 | 0.12 | FALSE |
83 | GTEx | Prostate | CHURC1 | 0.35 | 0.04 | lasso | 5 | 0.08 | 3.9e-03 | -8.36 | 7.9 | 2.7e-15 | -0.40 | 0.22 | 0.05 | FALSE |
84 | GTEx | Skin Not Sun Exposed Suprapubic | RAB15 | 0.16 | 0.06 | lasso | 5 | 0.05 | 1.3e-03 | -5.10 | -6.7 | 2.1e-11 | 0.33 | 0.60 | 0.11 | FALSE |
85 | GTEx | Skin Not Sun Exposed Suprapubic | CHURC1 | 0.45 | 0.33 | lasso | 8 | 0.49 | 3.9e-30 | -7.01 | 7.4 | 1.3e-13 | -0.37 | 1.00 | 0.00 | FALSE |
86 | GTEx | Skin Sun Exposed Lower leg | MTHFD1 | 0.25 | 0.24 | enet | 36 | 0.25 | 8.0e-21 | -7.22 | 8.6 | 8.5e-18 | 0.00 | 1.00 | 0.00 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | RAB15 | 0.20 | 0.07 | lasso | 7 | 0.10 | 8.6e-09 | -5.00 | -6.8 | 1.4e-11 | 0.36 | 1.00 | 0.00 | FALSE |
88 | GTEx | Skin Sun Exposed Lower leg | CHURC1 | 0.40 | 0.32 | enet | 45 | 0.40 | 1.1e-35 | -5.99 | 5.8 | 8.3e-09 | -0.34 | 1.00 | 0.00 | FALSE |
89 | GTEx | Skin Sun Exposed Lower leg | CTD-2555O16.2 | 0.12 | 0.11 | lasso | 3 | 0.10 | 7.4e-09 | -6.52 | 8.0 | 1.3e-15 | 0.05 | 1.00 | 0.00 | FALSE |
90 | GTEx | Skin Sun Exposed Lower leg | CTD-2555O16.4 | 0.09 | 0.04 | enet | 11 | 0.02 | 1.5e-02 | -7.25 | 9.3 | 1.5e-20 | -0.01 | 0.45 | 0.06 | FALSE |
91 | GTEx | Spleen | CHURC1 | 0.47 | 0.22 | lasso | 9 | 0.29 | 3.3e-08 | -7.94 | 7.5 | 6.8e-14 | -0.40 | 0.90 | 0.02 | FALSE |
92 | GTEx | Stomach | CHURC1 | 0.36 | 0.26 | lasso | 5 | 0.38 | 3.9e-19 | -7.01 | 7.2 | 4.1e-13 | -0.35 | 1.00 | 0.00 | FALSE |
93 | GTEx | Testis | MTHFD1 | 0.19 | 0.10 | enet | 12 | 0.08 | 3.0e-04 | -7.47 | 8.7 | 5.1e-18 | 0.01 | 0.71 | 0.11 | FALSE |
94 | GTEx | Testis | RAB15 | 0.23 | 0.16 | lasso | 5 | 0.13 | 2.8e-06 | -6.28 | -7.5 | 6.9e-14 | 0.42 | 0.66 | 0.08 | FALSE |
95 | GTEx | Testis | PPP1R36 | 0.29 | 0.25 | enet | 17 | 0.28 | 1.1e-12 | 7.71 | -10.1 | 4.6e-24 | 0.26 | 1.00 | 0.00 | FALSE |
96 | GTEx | Testis | CHURC1 | 0.28 | 0.12 | lasso | 11 | 0.18 | 3.1e-08 | -7.01 | 7.1 | 1.1e-12 | -0.34 | 0.98 | 0.00 | FALSE |
97 | GTEx | Thyroid | MTHFD1 | 0.37 | 0.29 | enet | 33 | 0.30 | 1.4e-23 | -7.22 | 9.1 | 9.7e-20 | 0.02 | 1.00 | 0.00 | FALSE |
98 | GTEx | Thyroid | RAB15 | 0.26 | 0.04 | enet | 52 | 0.08 | 1.5e-06 | -6.28 | -7.4 | 1.7e-13 | 0.35 | 0.97 | 0.01 | FALSE |
99 | GTEx | Thyroid | CHURC1 | 0.47 | 0.35 | lasso | 7 | 0.47 | 2.1e-40 | -7.01 | 8.0 | 1.1e-15 | -0.39 | 1.00 | 0.00 | FALSE |
100 | GTEx | Thyroid | CTD-2555O16.2 | 0.09 | 0.03 | enet | 9 | 0.04 | 5.1e-04 | -7.21 | 8.6 | 9.8e-18 | 0.02 | 0.08 | 0.89 | FALSE |
101 | GTEx | Thyroid | CTD-2555O16.4 | 0.10 | 0.05 | enet | 17 | 0.04 | 8.1e-04 | -7.20 | 7.7 | 2.0e-14 | -0.02 | 0.45 | 0.48 | FALSE |
102 | GTEx | Uterus | CHURC1 | 0.34 | 0.13 | lasso | 7 | 0.31 | 3.6e-07 | -7.79 | 8.6 | 6.2e-18 | -0.43 | 0.19 | 0.08 | FALSE |
103 | GTEx | Vagina | CHURC1 | 0.43 | 0.24 | lasso | 12 | 0.27 | 5.4e-07 | -7.01 | 8.9 | 8.3e-19 | -0.46 | 0.37 | 0.07 | FALSE |
104 | GTEx | Whole Blood | RAB15 | 0.34 | 0.03 | lasso | 6 | 0.05 | 2.8e-05 | -0.66 | -7.3 | 2.9e-13 | 0.34 | 0.51 | 0.30 | FALSE |
105 | GTEx | Whole Blood | CHURC1 | 0.30 | 0.27 | lasso | 6 | 0.33 | 3.9e-31 | -7.94 | 8.0 | 1.8e-15 | -0.40 | 1.00 | 0.00 | TRUE |
106 | METSIM | Adipose | CHURC1 | 0.34 | 0.44 | lasso | 6 | 0.44 | 1.4e-72 | -6.06 | -6.1 | 1.4e-09 | 0.28 | 1.00 | 0.00 | FALSE |
107 | METSIM | Adipose | MTHFD1 | 0.06 | 0.06 | enet | 10 | 0.06 | 2.4e-09 | -7.25 | 6.8 | 7.4e-12 | 0.07 | 1.00 | 0.00 | FALSE |
108 | METSIM | Adipose | RAB15 | 0.10 | 0.04 | enet | 22 | 0.08 | 3.8e-12 | -9.22 | -11.4 | 3.2e-30 | 0.51 | 1.00 | 0.00 | FALSE |
109 | NTR | Blood | CHURC1 | 0.07 | 0.05 | bslmm | 494 | 0.05 | 6.6e-17 | -5.80 | -5.4 | 8.0e-08 | 0.24 | 1.00 | 0.00 | FALSE |
110 | NTR | Blood | SYNE2 | 0.08 | 0.08 | lasso | 5 | 0.08 | 9.9e-25 | 5.65 | -5.7 | 1.5e-08 | -0.02 | 1.00 | 0.00 | FALSE |
111 | YFS | Blood | CHURC1 | 0.48 | 0.68 | lasso | 11 | 0.69 | 5.2e-322 | -5.99 | -6.1 | 1.0e-09 | 0.28 | 1.00 | 0.00 | FALSE |
112 | YFS | Blood | FUT8 | 0.04 | 0.03 | enet | 23 | 0.04 | 7.2e-12 | -4.84 | 5.5 | 4.2e-08 | -0.03 | 1.00 | 0.00 | TRUE |
113 | YFS | Blood | MAX | 0.04 | 0.02 | lasso | 4 | 0.02 | 2.8e-06 | -16.42 | 16.8 | 2.1e-63 | -0.99 | 0.00 | 1.00 | TRUE |
114 | YFS | Blood | RAB15 | 0.29 | 0.11 | bslmm | 485 | 0.22 | 8.5e-70 | -8.93 | -8.4 | 2.8e-17 | 0.37 | 1.00 | 0.00 | FALSE |
115 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CHURC1 | 0.23 | 0.34 | enet | 15 | 0.35 | 1.5e-30 | -6.03 | -5.9 | 4.7e-09 | 0.29 | 1.00 | 0.00 | FALSE |
116 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | FNTB | 0.10 | 0.03 | blup | 107 | 0.07 | 7.9e-07 | -6.06 | 9.7 | 2.7e-22 | -0.46 | 0.68 | 0.21 | FALSE |
117 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CHURC1 | 0.23 | 0.44 | lasso | 12 | 0.44 | 4.3e-100 | -6.03 | -6.1 | 1.1e-09 | 0.28 | 1.00 | 0.00 | FALSE |
118 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FNTB | 0.02 | 0.03 | enet | 8 | 0.03 | 2.0e-07 | -10.85 | 11.1 | 9.3e-29 | -0.54 | 0.94 | 0.04 | FALSE |
119 | The Cancer Genome Atlas | Breast Invasive Carcinoma | RAB15 | 0.02 | 0.01 | blup | 49 | 0.02 | 6.7e-05 | -7.94 | -11.3 | 1.7e-29 | 0.56 | 0.10 | 0.82 | FALSE |
120 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | CHURC1 | 0.31 | 0.40 | lasso | 4 | 0.39 | 1.7e-20 | -6.00 | -6.5 | 9.4e-11 | 0.31 | 1.00 | 0.00 | FALSE |
121 | The Cancer Genome Atlas | Colon Adenocarcinoma | CHURC1 | 0.31 | 0.40 | lasso | 13 | 0.38 | 3.7e-23 | -6.06 | -6.1 | 8.6e-10 | 0.29 | 1.00 | 0.00 | FALSE |
122 | The Cancer Genome Atlas | Esophageal Carcinoma | CHURC1 | 0.38 | 0.47 | enet | 16 | 0.43 | 3.9e-15 | -6.06 | -6.1 | 1.2e-09 | 0.29 | 1.00 | 0.00 | FALSE |
123 | The Cancer Genome Atlas | Esophageal Carcinoma | FNTB | 0.09 | 0.05 | lasso | 3 | 0.04 | 2.6e-02 | -8.64 | 9.2 | 3.2e-20 | -0.47 | 0.05 | 0.29 | FALSE |
124 | The Cancer Genome Atlas | Glioblastoma Multiforme | CHURC1 | 0.14 | 0.06 | blup | 58 | 0.08 | 1.8e-03 | -5.14 | -5.3 | 8.6e-08 | 0.25 | 0.19 | 0.06 | TRUE |
125 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CHURC1 | 0.27 | 0.49 | lasso | 9 | 0.50 | 3.3e-64 | -6.06 | -6.5 | 1.0e-10 | 0.32 | 1.00 | 0.00 | FALSE |
126 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | FNTB | 0.06 | 0.02 | blup | 106 | 0.04 | 3.7e-05 | -5.80 | 10.0 | 1.8e-23 | -0.48 | 0.23 | 0.10 | FALSE |
127 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | RAB15 | 0.03 | 0.00 | blup | 49 | 0.01 | 1.8e-02 | -12.56 | -11.2 | 5.5e-29 | 0.57 | 0.01 | 0.95 | FALSE |
128 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CHURC1 | 0.39 | 0.54 | lasso | 7 | 0.54 | 2.7e-72 | -6.06 | -6.1 | 1.4e-09 | 0.28 | 1.00 | 0.00 | FALSE |
129 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FNTB | 0.04 | 0.02 | lasso | 3 | 0.04 | 2.3e-05 | -5.80 | 9.5 | 1.7e-21 | -0.48 | 0.90 | 0.02 | FALSE |
130 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MTHFD1 | 0.11 | 0.12 | lasso | 4 | 0.12 | 9.1e-14 | -6.58 | 7.0 | 3.0e-12 | 0.05 | 1.00 | 0.00 | FALSE |
131 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | RAB15 | 0.14 | 0.07 | enet | 15 | 0.09 | 5.5e-10 | -12.49 | -12.0 | 3.2e-33 | 0.55 | 0.00 | 1.00 | FALSE |
132 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CHURC1 | 0.21 | 0.25 | lasso | 4 | 0.24 | 1.3e-27 | -6.03 | -6.2 | 5.3e-10 | 0.29 | 1.00 | 0.00 | FALSE |
133 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MTHFD1 | 0.04 | 0.02 | blup | 70 | 0.02 | 8.7e-04 | -7.22 | 6.4 | 1.5e-10 | -0.02 | 0.06 | 0.24 | FALSE |
134 | The Cancer Genome Atlas | Brain Lower Grade Glioma | RAB15 | 0.04 | 0.05 | blup | 49 | 0.06 | 2.5e-07 | -7.94 | -10.0 | 9.8e-24 | 0.53 | 0.39 | 0.59 | TRUE |
135 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | CHURC1 | 0.14 | 0.12 | enet | 11 | 0.12 | 4.0e-06 | -6.06 | -6.8 | 8.3e-12 | 0.31 | 0.89 | 0.01 | FALSE |
136 | The Cancer Genome Atlas | Lung Adenocarcinoma | CHURC1 | 0.25 | 0.43 | lasso | 8 | 0.43 | 9.2e-55 | -6.06 | -6.1 | 1.2e-09 | 0.28 | 1.00 | 0.00 | FALSE |
137 | The Cancer Genome Atlas | Lung Adenocarcinoma | RAB15 | 0.04 | 0.01 | enet | 5 | 0.03 | 1.9e-04 | -10.60 | -10.1 | 3.4e-24 | 0.56 | 0.03 | 0.82 | FALSE |
138 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CHURC1 | 0.42 | 0.52 | enet | 20 | 0.53 | 1.9e-70 | -6.06 | -5.9 | 3.1e-09 | 0.29 | 1.00 | 0.00 | FALSE |
139 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | ESR2 | 0.02 | 0.00 | blup | 88 | 0.01 | 2.1e-02 | -4.91 | 7.3 | 2.2e-13 | 0.01 | 0.04 | 0.52 | FALSE |
140 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | CHURC1 | 0.25 | 0.26 | lasso | 10 | 0.25 | 3.9e-17 | -6.06 | -6.1 | 1.2e-09 | 0.28 | 1.00 | 0.00 | FALSE |
141 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | MTHFD1 | 0.06 | 0.06 | enet | 4 | 0.04 | 9.5e-04 | -7.21 | 7.2 | 6.1e-13 | 0.04 | 0.34 | 0.25 | FALSE |
142 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | RAB15 | 0.11 | 0.01 | enet | 12 | 0.06 | 1.1e-04 | -8.93 | -11.8 | 2.9e-32 | 0.50 | 0.02 | 0.88 | FALSE |
143 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | CHURC1 | 0.36 | 0.46 | lasso | 5 | 0.48 | 2.6e-22 | -5.80 | -5.7 | 1.5e-08 | 0.27 | 1.00 | 0.00 | FALSE |
144 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | FNTB | 0.18 | 0.12 | blup | 107 | 0.18 | 6.5e-08 | -7.01 | 9.3 | 1.3e-20 | -0.48 | 0.91 | 0.07 | FALSE |
145 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CHURC1 | 0.46 | 0.47 | lasso | 8 | 0.51 | 2.0e-23 | -5.80 | -5.8 | 5.3e-09 | 0.28 | 1.00 | 0.00 | FALSE |
146 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CHURC1 | 0.35 | 0.50 | lasso | 5 | 0.50 | 3.3e-59 | -6.06 | -6.0 | 2.3e-09 | 0.28 | 1.00 | 0.00 | FALSE |
147 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FNTB | 0.05 | 0.05 | blup | 107 | 0.06 | 3.6e-07 | -8.11 | 8.4 | 3.4e-17 | -0.43 | 0.99 | 0.00 | FALSE |
148 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MTHFD1 | 0.07 | 0.07 | lasso | 6 | 0.07 | 5.2e-08 | -7.22 | 7.2 | 8.4e-13 | 0.04 | 0.99 | 0.01 | FALSE |
149 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PLEKHG3 | 0.05 | 0.05 | lasso | 3 | 0.06 | 1.8e-06 | 5.58 | 6.4 | 1.5e-10 | -0.06 | 0.06 | 0.94 | FALSE |
150 | The Cancer Genome Atlas | Prostate Adenocarcinoma | RAB15 | 0.04 | 0.00 | blup | 49 | 0.01 | 6.9e-02 | -12.49 | -12.1 | 6.8e-34 | 0.57 | 0.00 | 0.96 | FALSE |
151 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ZBTB1 | 0.06 | 0.01 | blup | 56 | 0.04 | 1.3e-04 | 7.73 | -8.6 | 1.1e-17 | 0.12 | 0.00 | 0.97 | FALSE |
152 | The Cancer Genome Atlas | Rectum Adenocarcinoma | CHURC1 | 0.30 | 0.32 | lasso | 7 | 0.26 | 6.9e-07 | -6.06 | -6.4 | 1.9e-10 | 0.31 | 0.68 | 0.19 | FALSE |
153 | The Cancer Genome Atlas | Soft Tissue Sarcoma | CHURC1 | 0.23 | 0.28 | lasso | 1 | 0.28 | 6.9e-17 | -6.00 | -6.0 | 2.0e-09 | 0.28 | 1.00 | 0.00 | FALSE |
154 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FNTB | 0.05 | 0.04 | blup | 107 | 0.03 | 6.5e-03 | -6.00 | 9.2 | 2.2e-20 | -0.49 | 0.23 | 0.12 | FALSE |
155 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | CHURC1 | 0.21 | 0.16 | blup | 58 | 0.15 | 9.4e-05 | -5.99 | -5.8 | 6.2e-09 | 0.28 | 0.47 | 0.10 | FALSE |
156 | The Cancer Genome Atlas | Stomach Adenocarcinoma | CHURC1 | 0.24 | 0.37 | lasso | 9 | 0.36 | 1.3e-27 | -6.06 | -5.8 | 7.5e-09 | 0.28 | 1.00 | 0.00 | FALSE |
157 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | CHURC1 | 0.17 | 0.14 | lasso | 9 | 0.17 | 1.8e-06 | -6.06 | -5.4 | 8.2e-08 | 0.28 | 0.67 | 0.03 | FALSE |
158 | The Cancer Genome Atlas | Thyroid Carcinoma | CHURC1 | 0.39 | 0.50 | lasso | 5 | 0.51 | 1.3e-57 | -6.06 | -5.7 | 1.3e-08 | 0.28 | 1.00 | 0.00 | FALSE |
159 | The Cancer Genome Atlas | Thyroid Carcinoma | ESR2 | 0.05 | 0.05 | lasso | 3 | 0.05 | 9.6e-06 | 6.38 | 6.6 | 4.9e-11 | 0.02 | 0.77 | 0.03 | FALSE |
160 | The Cancer Genome Atlas | Thyroid Carcinoma | FNTB | 0.14 | 0.06 | enet | 18 | 0.14 | 1.4e-13 | -5.80 | 13.1 | 2.4e-39 | -0.64 | 0.30 | 0.70 | FALSE |
161 | The Cancer Genome Atlas | Thyroid Carcinoma | MTHFD1 | 0.26 | 0.26 | enet | 16 | 0.27 | 1.7e-26 | -7.22 | 8.3 | 7.5e-17 | 0.03 | 1.00 | 0.00 | FALSE |
162 | The Cancer Genome Atlas | Thyroid Carcinoma | RAB15 | 0.04 | 0.01 | blup | 49 | 0.01 | 2.6e-02 | -6.16 | -6.9 | 7.0e-12 | 0.36 | 0.02 | 0.05 | FALSE |
163 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | CHURC1 | 0.35 | 0.22 | enet | 14 | 0.24 | 2.9e-07 | -6.06 | -7.9 | 3.9e-15 | 0.35 | 0.58 | 0.29 | FALSE |
164 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | FNTB | 0.12 | 0.08 | lasso | 2 | 0.04 | 2.4e-02 | -5.80 | 6.0 | 2.7e-09 | -0.28 | 0.23 | 0.04 | FALSE |