Best TWAS P=1.09e-50 · Best GWAS P=2.18e-54 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ATP6V1E2 | 0.21 | 0.19 | lasso | 4 | 0.22 | 4.0e-26 | 7.12 | -6.2 | 6.4e-10 | -0.32 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | CRIPT | 0.23 | 0.23 | lasso | 5 | 0.24 | 6.2e-29 | 7.12 | 7.5 | 5.5e-14 | 0.36 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | EML4 | 0.05 | 0.04 | enet | 12 | 0.03 | 1.2e-04 | -9.43 | -10.3 | 6.3e-25 | -0.04 | 0.02 | 0.98 | TRUE |
4 | GTEx | Adipose Subcutaneous | CRIPT | 0.12 | 0.10 | lasso | 3 | 0.09 | 7.1e-08 | 7.12 | 9.0 | 2.4e-19 | 0.47 | 0.94 | 0.05 | FALSE |
5 | GTEx | Adipose Subcutaneous | ATP6V1E2 | 0.18 | 0.08 | lasso | 6 | 0.13 | 5.6e-11 | -1.32 | -6.3 | 3.4e-10 | -0.29 | 1.00 | 0.00 | TRUE |
6 | GTEx | Adipose Visceral Omentum | ATP6V1E2 | 0.25 | 0.22 | enet | 11 | 0.28 | 1.1e-14 | 7.12 | -7.0 | 2.0e-12 | -0.35 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adrenal Gland | CRIPT | 0.16 | 0.10 | enet | 11 | 0.13 | 2.3e-05 | 8.15 | 8.5 | 1.7e-17 | 0.40 | 0.67 | 0.04 | FALSE |
8 | GTEx | Adrenal Gland | PREPL | 0.15 | 0.18 | lasso | 3 | 0.18 | 3.9e-07 | 6.44 | -6.8 | 7.9e-12 | 0.00 | 0.82 | 0.07 | FALSE |
9 | GTEx | Artery Aorta | CRIPT | 0.16 | 0.06 | lasso | 6 | 0.06 | 3.8e-04 | 9.16 | 8.2 | 2.0e-16 | 0.42 | 0.84 | 0.04 | FALSE |
10 | GTEx | Artery Aorta | PREPL | 0.07 | 0.04 | lasso | 2 | 0.03 | 1.1e-02 | 7.08 | -6.7 | 2.0e-11 | 0.01 | 0.27 | 0.36 | FALSE |
11 | GTEx | Artery Aorta | PLEKHH2 | 0.50 | 0.18 | lasso | 9 | 0.31 | 9.4e-18 | -2.16 | 5.9 | 4.2e-09 | 0.07 | 1.00 | 0.00 | FALSE |
12 | GTEx | Artery Aorta | ATP6V1E2 | 0.34 | 0.07 | lasso | 5 | 0.21 | 8.2e-12 | -1.32 | -5.6 | 2.4e-08 | -0.29 | 0.92 | 0.03 | FALSE |
13 | GTEx | Artery Coronary | PREPL | 0.33 | 0.01 | enet | 7 | 0.00 | 4.2e-01 | 7.10 | -9.6 | 7.0e-22 | -0.01 | 0.11 | 0.12 | FALSE |
14 | GTEx | Artery Coronary | FOXN2 | 0.40 | 0.17 | lasso | 8 | 0.14 | 2.1e-05 | -6.00 | -5.9 | 4.5e-09 | -0.04 | 0.04 | 0.84 | FALSE |
15 | GTEx | Artery Coronary | ATP6V1E2 | 0.32 | 0.16 | lasso | 5 | 0.14 | 2.8e-05 | 7.13 | -6.3 | 2.3e-10 | -0.36 | 0.29 | 0.12 | FALSE |
16 | GTEx | Artery Tibial | CRIPT | 0.22 | 0.17 | lasso | 5 | 0.22 | 7.5e-17 | 6.09 | 7.4 | 1.9e-13 | 0.39 | 1.00 | 0.00 | FALSE |
17 | GTEx | Artery Tibial | PREPL | 0.04 | 0.02 | lasso | 5 | 0.01 | 2.7e-02 | 7.17 | -7.4 | 9.9e-14 | -0.01 | 0.51 | 0.10 | FALSE |
18 | GTEx | Artery Tibial | PIGF | 0.18 | 0.10 | enet | 8 | 0.10 | 2.9e-08 | 8.25 | -6.4 | 1.6e-10 | -0.38 | 0.95 | 0.04 | TRUE |
19 | GTEx | Artery Tibial | PLEKHH2 | 0.49 | 0.17 | enet | 48 | 0.29 | 2.6e-23 | -2.16 | 8.6 | 8.2e-18 | 0.09 | 1.00 | 0.00 | TRUE |
20 | GTEx | Brain Cerebellar Hemisphere | CRIPT | 0.41 | 0.16 | enet | 29 | 0.23 | 1.1e-06 | 6.31 | 6.8 | 9.2e-12 | 0.36 | 0.24 | 0.07 | FALSE |
21 | GTEx | Brain Cerebellar Hemisphere | FOXN2 | 0.47 | 0.40 | lasso | 5 | 0.31 | 1.0e-08 | -6.00 | -6.0 | 2.1e-09 | -0.05 | 0.06 | 0.94 | FALSE |
22 | GTEx | Brain Cerebellum | FOXN2 | 0.62 | 0.49 | lasso | 9 | 0.51 | 3.3e-17 | -6.00 | -6.1 | 1.1e-09 | -0.04 | 0.06 | 0.94 | FALSE |
23 | GTEx | Brain Cortex | CRIPT | 0.35 | 0.17 | lasso | 7 | 0.09 | 2.1e-03 | 6.31 | 6.0 | 2.4e-09 | 0.39 | 0.26 | 0.05 | FALSE |
24 | GTEx | Brain Frontal Cortex BA9 | ATP6V1E2 | 0.40 | -0.01 | enet | 35 | 0.06 | 1.4e-02 | 7.12 | -10.5 | 5.4e-26 | -0.43 | 0.08 | 0.28 | TRUE |
25 | GTEx | Brain Nucleus accumbens basal ganglia | CRIPT | 0.27 | -0.01 | enet | 8 | 0.02 | 1.2e-01 | 9.16 | 9.7 | 2.4e-22 | 0.43 | 0.12 | 0.07 | FALSE |
26 | GTEx | Brain Nucleus accumbens basal ganglia | ATP6V1E2 | 0.31 | -0.01 | enet | 28 | 0.05 | 2.1e-02 | 5.89 | -8.6 | 7.1e-18 | -0.28 | 0.12 | 0.09 | FALSE |
27 | GTEx | Breast Mammary Tissue (Female) | AC016722.4 | 0.20 | 0.05 | lasso | 3 | 0.05 | 1.3e-02 | -6.80 | -9.0 | 2.1e-19 | -0.36 | 0.06 | 0.27 | TRUE |
28 | GTEx | Cells EBV-transformed lymphocytes | CRIPT | 0.28 | 0.16 | enet | 10 | 0.23 | 5.4e-08 | 6.09 | 7.7 | 1.5e-14 | 0.47 | 0.73 | 0.15 | FALSE |
29 | GTEx | Cells EBV-transformed lymphocytes | FOXN2 | 0.36 | 0.20 | lasso | 8 | 0.19 | 8.1e-07 | -6.00 | -7.2 | 6.5e-13 | -0.02 | 0.06 | 0.82 | TRUE |
30 | GTEx | Cells EBV-transformed lymphocytes | ATP6V1E2 | 0.43 | 0.33 | lasso | 5 | 0.30 | 2.3e-10 | 7.98 | -8.7 | 3.9e-18 | -0.38 | 0.93 | 0.06 | FALSE |
31 | GTEx | Cells Transformed fibroblasts | CRIPT | 0.11 | 0.03 | lasso | 3 | 0.01 | 2.9e-02 | 6.40 | 7.5 | 8.6e-14 | 0.36 | 0.28 | 0.31 | FALSE |
32 | GTEx | Cells Transformed fibroblasts | CAMKMT | 0.15 | 0.06 | lasso | 4 | 0.03 | 1.7e-03 | 10.33 | 9.8 | 1.2e-22 | -0.06 | 0.65 | 0.07 | TRUE |
33 | GTEx | Cells Transformed fibroblasts | FOXN2 | 0.18 | 0.15 | lasso | 4 | 0.14 | 7.3e-11 | -6.00 | -5.5 | 4.7e-08 | -0.02 | 0.06 | 0.94 | FALSE |
34 | GTEx | Cells Transformed fibroblasts | ATP6V1E2 | 0.23 | 0.23 | lasso | 3 | 0.25 | 4.8e-19 | 7.98 | -7.9 | 2.2e-15 | -0.36 | 1.00 | 0.00 | FALSE |
35 | GTEx | Colon Sigmoid | ATP6V1E2 | 0.25 | 0.08 | enet | 17 | 0.13 | 3.3e-05 | 7.98 | -10.0 | 9.3e-24 | -0.38 | 0.60 | 0.12 | FALSE |
36 | GTEx | Colon Transverse | PREPL | 0.18 | 0.08 | lasso | 7 | 0.06 | 1.0e-03 | 7.12 | -6.7 | 2.2e-11 | 0.00 | 0.43 | 0.03 | FALSE |
37 | GTEx | Colon Transverse | FOXN2 | 0.24 | 0.25 | lasso | 1 | 0.24 | 1.5e-11 | -6.00 | -6.0 | 1.9e-09 | -0.04 | 0.06 | 0.94 | FALSE |
38 | GTEx | Colon Transverse | ATP6V1E2 | 0.27 | 0.03 | enet | 34 | 0.12 | 2.2e-06 | 7.98 | -6.6 | 3.4e-11 | -0.33 | 0.26 | 0.08 | FALSE |
39 | GTEx | Esophagus Gastroesophageal Junction | CRIPT | 0.21 | 0.14 | enet | 9 | 0.18 | 6.4e-07 | 6.40 | 8.2 | 2.3e-16 | 0.39 | 0.76 | 0.02 | FALSE |
40 | GTEx | Esophagus Gastroesophageal Junction | AC016722.2 | 0.30 | 0.07 | lasso | 4 | 0.11 | 7.7e-05 | 7.19 | -10.1 | 6.9e-24 | -0.37 | 0.25 | 0.05 | FALSE |
41 | GTEx | Esophagus Gastroesophageal Junction | ATP6V1E2 | 0.32 | 0.13 | lasso | 5 | 0.14 | 1.2e-05 | 7.13 | -6.9 | 4.9e-12 | -0.33 | 0.48 | 0.03 | FALSE |
42 | GTEx | Esophagus Mucosa | FOXN2 | 0.12 | 0.12 | lasso | 2 | 0.10 | 2.4e-07 | -6.00 | -6.7 | 2.7e-11 | -0.03 | 0.04 | 0.95 | FALSE |
43 | GTEx | Esophagus Mucosa | ATP6V1E2 | 0.26 | 0.17 | lasso | 9 | 0.18 | 5.4e-12 | 7.13 | -9.1 | 1.1e-19 | -0.45 | 1.00 | 0.00 | TRUE |
44 | GTEx | Esophagus Muscularis | CRIPT | 0.15 | 0.21 | lasso | 4 | 0.20 | 2.1e-12 | 7.12 | 7.2 | 5.4e-13 | 0.34 | 1.00 | 0.00 | FALSE |
45 | GTEx | Esophagus Muscularis | FOXN2 | 0.31 | 0.24 | lasso | 5 | 0.23 | 3.0e-14 | -6.00 | -5.7 | 1.6e-08 | -0.04 | 0.06 | 0.94 | FALSE |
46 | GTEx | Esophagus Muscularis | ATP6V1E2 | 0.30 | 0.10 | enet | 42 | 0.17 | 1.9e-10 | 7.13 | -8.0 | 9.1e-16 | -0.34 | 1.00 | 0.00 | FALSE |
47 | GTEx | Heart Left Ventricle | PREPL | 0.10 | 0.05 | lasso | 4 | 0.02 | 3.5e-02 | 7.59 | -7.1 | 1.5e-12 | 0.00 | 0.30 | 0.03 | FALSE |
48 | GTEx | Heart Left Ventricle | ATP6V1E2 | 0.38 | 0.05 | enet | 32 | 0.20 | 1.1e-10 | 7.12 | -10.6 | 2.5e-26 | -0.49 | 0.21 | 0.78 | FALSE |
49 | GTEx | Lung | SRBD1 | 0.18 | 0.07 | lasso | 4 | 0.05 | 1.6e-04 | 4.53 | -6.7 | 1.8e-11 | 0.00 | 0.62 | 0.12 | TRUE |
50 | GTEx | Lung | FOXN2 | 0.37 | 0.24 | lasso | 5 | 0.24 | 2.5e-18 | -6.00 | -6.3 | 2.8e-10 | -0.04 | 0.06 | 0.94 | FALSE |
51 | GTEx | Lung | ATP6V1E2 | 0.33 | 0.15 | lasso | 5 | 0.25 | 4.5e-19 | 7.12 | -5.8 | 7.2e-09 | -0.31 | 1.00 | 0.00 | FALSE |
52 | GTEx | Muscle Skeletal | CRIPT | 0.14 | 0.05 | enet | 25 | 0.08 | 1.8e-08 | 6.31 | 7.8 | 4.6e-15 | 0.41 | 0.99 | 0.01 | FALSE |
53 | GTEx | Muscle Skeletal | ATP6V1E2 | 0.30 | 0.16 | enet | 27 | 0.21 | 2.5e-20 | -1.32 | -8.7 | 3.1e-18 | -0.40 | 1.00 | 0.00 | FALSE |
54 | GTEx | Nerve Tibial | CRIPT | 0.17 | 0.16 | enet | 9 | 0.20 | 2.3e-14 | 6.40 | 6.9 | 5.0e-12 | 0.37 | 1.00 | 0.00 | FALSE |
55 | GTEx | Nerve Tibial | PIGF | 0.29 | 0.10 | lasso | 7 | 0.10 | 2.0e-07 | 8.59 | -6.6 | 3.8e-11 | -0.38 | 0.99 | 0.00 | FALSE |
56 | GTEx | Nerve Tibial | ZFP36L2 | 0.06 | 0.00 | lasso | 8 | 0.01 | 3.5e-02 | 7.59 | -5.4 | 5.7e-08 | -0.03 | 0.20 | 0.28 | FALSE |
57 | GTEx | Nerve Tibial | FOXN2 | 0.46 | 0.38 | enet | 22 | 0.37 | 2.6e-27 | -6.00 | -5.5 | 3.2e-08 | -0.04 | 0.06 | 0.94 | FALSE |
58 | GTEx | Nerve Tibial | ATP6V1E2 | 0.22 | 0.06 | enet | 41 | 0.13 | 3.2e-09 | 7.98 | -6.7 | 2.5e-11 | -0.28 | 0.82 | 0.06 | FALSE |
59 | GTEx | Pancreas | PREPL | 0.12 | 0.03 | lasso | 4 | 0.02 | 6.7e-02 | 7.19 | -7.0 | 3.6e-12 | 0.00 | 0.50 | 0.05 | FALSE |
60 | GTEx | Pancreas | FOXN2 | 0.23 | 0.12 | lasso | 2 | 0.07 | 6.7e-04 | -6.00 | -5.9 | 4.3e-09 | -0.04 | 0.05 | 0.79 | FALSE |
61 | GTEx | Pituitary | FOXN2 | 0.35 | 0.32 | lasso | 3 | 0.31 | 1.8e-08 | -6.00 | -5.2 | 2.0e-07 | -0.02 | 0.06 | 0.91 | FALSE |
62 | GTEx | Pituitary | ATP6V1E2 | 0.33 | 0.05 | enet | 19 | 0.14 | 2.6e-04 | 8.13 | -8.7 | 3.6e-18 | -0.27 | 0.21 | 0.08 | TRUE |
63 | GTEx | Prostate | HAAO | 0.15 | -0.01 | lasso | 6 | -0.01 | 6.8e-01 | -6.49 | -6.4 | 1.6e-10 | -0.01 | 0.14 | 0.05 | FALSE |
64 | GTEx | Prostate | FOXN2 | 0.21 | 0.14 | lasso | 3 | 0.17 | 4.2e-05 | -6.00 | -6.1 | 1.1e-09 | -0.04 | 0.07 | 0.60 | FALSE |
65 | GTEx | Skin Not Sun Exposed Suprapubic | CRIPT | 0.16 | 0.19 | enet | 8 | 0.21 | 9.7e-12 | 7.05 | 7.8 | 4.5e-15 | 0.36 | 1.00 | 0.00 | FALSE |
66 | GTEx | Skin Not Sun Exposed Suprapubic | PIGF | 0.14 | 0.08 | lasso | 4 | 0.07 | 1.7e-04 | 15.48 | -15.0 | 1.1e-50 | -0.92 | 0.01 | 0.98 | TRUE |
67 | GTEx | Skin Not Sun Exposed Suprapubic | FOXN2 | 0.14 | 0.06 | lasso | 3 | 0.08 | 2.2e-05 | -6.00 | -7.1 | 1.0e-12 | -0.01 | 0.04 | 0.95 | FALSE |
68 | GTEx | Skin Not Sun Exposed Suprapubic | ATP6V1E2 | 0.22 | 0.18 | lasso | 9 | 0.19 | 8.8e-11 | 7.13 | -8.1 | 5.7e-16 | -0.41 | 1.00 | 0.00 | FALSE |
69 | GTEx | Skin Sun Exposed Lower leg | CRIPT | 0.19 | 0.09 | lasso | 6 | 0.10 | 8.6e-09 | 7.12 | 7.2 | 5.2e-13 | 0.37 | 1.00 | 0.00 | FALSE |
70 | GTEx | Skin Sun Exposed Lower leg | PPP1R21 | 0.14 | 0.01 | enet | 59 | 0.06 | 5.4e-06 | -0.16 | -5.8 | 7.8e-09 | 0.00 | 0.11 | 0.41 | TRUE |
71 | GTEx | Skin Sun Exposed Lower leg | FOXN2 | 0.07 | 0.11 | lasso | 1 | 0.10 | 1.5e-08 | -6.00 | -6.0 | 1.9e-09 | -0.04 | 0.06 | 0.94 | FALSE |
72 | GTEx | Skin Sun Exposed Lower leg | ATP6V1E2 | 0.36 | 0.17 | lasso | 10 | 0.28 | 2.8e-23 | 7.12 | -7.4 | 1.1e-13 | -0.49 | 1.00 | 0.00 | FALSE |
73 | GTEx | Spleen | MTA3 | 0.40 | -0.01 | lasso | 6 | 0.02 | 9.2e-02 | 3.17 | 5.2 | 1.7e-07 | 0.05 | 0.10 | 0.19 | FALSE |
74 | GTEx | Spleen | ATP6V1E2 | 0.42 | 0.12 | lasso | 7 | 0.16 | 8.3e-05 | -1.32 | -5.6 | 2.5e-08 | -0.29 | 0.16 | 0.10 | FALSE |
75 | GTEx | Stomach | CRIPT | 0.14 | 0.14 | lasso | 2 | 0.16 | 5.0e-08 | 6.40 | 7.0 | 1.7e-12 | 0.33 | 0.91 | 0.02 | FALSE |
76 | GTEx | Stomach | ATP6V1E2 | 0.18 | 0.04 | lasso | 5 | 0.04 | 4.0e-03 | 7.13 | -6.7 | 2.6e-11 | -0.32 | 0.26 | 0.03 | FALSE |
77 | GTEx | Testis | CRIPT | 0.32 | 0.25 | lasso | 5 | 0.24 | 7.3e-11 | 7.12 | 7.1 | 1.4e-12 | 0.35 | 1.00 | 0.00 | FALSE |
78 | GTEx | Testis | CAMKMT | 0.39 | 0.12 | lasso | 9 | 0.08 | 3.1e-04 | -5.63 | 5.2 | 2.1e-07 | -0.01 | 0.21 | 0.08 | FALSE |
79 | GTEx | Testis | SOCS5 | 0.17 | 0.01 | lasso | 3 | 0.03 | 1.2e-02 | -5.14 | -8.4 | 3.7e-17 | -0.41 | 0.06 | 0.66 | TRUE |
80 | GTEx | Testis | RP11-417F21.1 | 0.15 | 0.02 | enet | 11 | 0.06 | 1.8e-03 | -7.36 | 5.6 | 2.1e-08 | 0.21 | 0.19 | 0.07 | TRUE |
81 | GTEx | Thyroid | CRIPT | 0.08 | 0.10 | lasso | 2 | 0.11 | 5.1e-09 | 7.12 | 7.1 | 1.2e-12 | 0.36 | 0.98 | 0.01 | TRUE |
82 | GTEx | Thyroid | CAMKMT | 0.13 | 0.03 | lasso | 4 | 0.09 | 1.0e-07 | 5.15 | 6.2 | 7.1e-10 | 0.03 | 0.40 | 0.02 | FALSE |
83 | GTEx | Thyroid | FOXN2 | 0.27 | 0.21 | lasso | 5 | 0.19 | 2.2e-14 | -6.00 | -6.1 | 1.1e-09 | -0.04 | 0.06 | 0.94 | FALSE |
84 | GTEx | Thyroid | AC010883.5 | 0.11 | 0.09 | lasso | 2 | 0.08 | 1.5e-06 | 5.77 | 5.9 | 4.0e-09 | 0.05 | 0.97 | 0.00 | FALSE |
85 | GTEx | Thyroid | ATP6V1E2 | 0.13 | 0.03 | enet | 15 | 0.06 | 2.1e-05 | 7.12 | -8.2 | 3.4e-16 | -0.38 | 0.73 | 0.13 | FALSE |
86 | GTEx | Vagina | ATP6V1E2 | 0.31 | 0.00 | lasso | 7 | -0.01 | 6.5e-01 | 7.12 | -8.4 | 6.0e-17 | -0.39 | 0.08 | 0.26 | TRUE |
87 | GTEx | Whole Blood | CRIPT | 0.11 | 0.04 | enet | 18 | 0.05 | 1.2e-05 | 7.05 | 8.8 | 1.4e-18 | 0.37 | 0.86 | 0.06 | TRUE |
88 | GTEx | Whole Blood | CAMKMT | 0.09 | 0.01 | enet | 25 | 0.02 | 2.9e-03 | 10.26 | 5.2 | 1.8e-07 | -0.01 | 0.12 | 0.41 | FALSE |
89 | GTEx | Whole Blood | ATP6V1E2 | 0.07 | 0.06 | enet | 10 | 0.06 | 8.1e-06 | 7.98 | -6.7 | 1.6e-11 | -0.35 | 0.95 | 0.00 | FALSE |
90 | METSIM | Adipose | AC016735.2 | 0.05 | 0.00 | bslmm | 466 | 0.01 | 3.0e-03 | -1.97 | 6.9 | 6.1e-12 | 0.03 | 0.06 | 0.06 | TRUE |
91 | METSIM | Adipose | ATP6V1E2 | 0.16 | 0.18 | lasso | 11 | 0.19 | 2.7e-27 | 7.12 | -7.7 | 1.8e-14 | -0.36 | 1.00 | 0.00 | FALSE |
92 | METSIM | Adipose | CRIPT | 0.07 | 0.08 | bslmm | 667 | 0.07 | 2.0e-10 | 6.09 | 6.2 | 6.6e-10 | 0.41 | 1.00 | 0.00 | TRUE |
93 | METSIM | Adipose | FOXN2 | 0.10 | 0.06 | lasso | 5 | 0.07 | 2.8e-11 | -6.31 | -6.4 | 1.6e-10 | -0.01 | 0.01 | 0.99 | FALSE |
94 | METSIM | Adipose | PREPL | 0.04 | 0.05 | lasso | 3 | 0.04 | 1.7e-06 | 7.23 | -7.2 | 6.9e-13 | -0.01 | 0.99 | 0.00 | FALSE |
95 | NTR | Blood | COX7A2L | 0.02 | 0.00 | blup | 513 | 0.01 | 5.2e-03 | 0.99 | -6.4 | 1.4e-10 | -0.08 | 0.06 | 0.08 | FALSE |
96 | NTR | Blood | CRIPT | 0.04 | 0.05 | lasso | 6 | 0.05 | 3.0e-15 | 7.05 | -8.0 | 9.8e-16 | -0.38 | 1.00 | 0.00 | FALSE |
97 | ROSMAP | Brain Pre-frontal Cortex | RHOQ | 0.07 | 0.01 | enet | 11 | 0.03 | 1.6e-04 | -2.95 | 6.7 | 2.0e-11 | 0.20 | 0.49 | 0.01 | FALSE |
98 | ROSMAP | Brain Pre-frontal Cortex | CRIPT | 0.36 | 0.31 | enet | 24 | 0.32 | 1.3e-41 | 7.05 | 7.6 | 2.2e-14 | 0.38 | 1.00 | 0.00 | FALSE |
99 | ROSMAP | Brain Pre-frontal Cortex | PREPL | 0.07 | 0.03 | lasso | 5 | 0.06 | 2.5e-08 | 5.15 | -5.1 | 3.0e-07 | 0.04 | 0.76 | 0.01 | FALSE |
100 | ROSMAP | Brain Pre-frontal Cortex | CAMKMT | 0.06 | 0.06 | lasso | 4 | 0.05 | 1.6e-06 | 9.00 | -8.6 | 6.0e-18 | 0.00 | 1.00 | 0.00 | TRUE |
101 | ROSMAP | Brain Pre-frontal Cortex | PIGF | 0.08 | 0.03 | lasso | 3 | 0.07 | 5.8e-09 | 8.25 | -6.4 | 1.4e-10 | -0.36 | 0.90 | 0.03 | FALSE |
102 | ROSMAP | Brain Pre-frontal Cortex | FOXN2 | 0.26 | 0.21 | lasso | 6 | 0.21 | 2.4e-26 | -6.00 | -5.5 | 3.4e-08 | -0.03 | 0.05 | 0.95 | FALSE |
103 | ROSMAP | Brain Pre-frontal Cortex | AC073283.7 | 0.20 | 0.10 | lasso | 4 | 0.16 | 1.8e-19 | -3.36 | 6.3 | 2.9e-10 | 0.04 | 1.00 | 0.00 | TRUE |
104 | YFS | Blood | ATP6V1E2 | 0.43 | 0.25 | bslmm | 686 | 0.36 | 4.6e-126 | 2.77 | -5.8 | 8.4e-09 | -0.32 | 1.00 | 0.00 | FALSE |
105 | YFS | Blood | CRIPT | 0.42 | 0.51 | lasso | 5 | 0.52 | 1.1e-203 | 7.05 | 7.3 | 3.4e-13 | 0.35 | 1.00 | 0.00 | FALSE |
106 | YFS | Blood | FOXN2 | 0.12 | 0.06 | enet | 31 | 0.06 | 9.9e-20 | -6.00 | -7.0 | 3.6e-12 | 0.00 | 0.06 | 0.94 | FALSE |
107 | YFS | Blood | OXER1 | 0.04 | 0.03 | lasso | 2 | 0.03 | 2.0e-11 | -6.49 | 6.6 | 3.5e-11 | -0.06 | 1.00 | 0.00 | FALSE |
108 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ATP6V1E2 | 0.06 | 0.03 | lasso | 5 | 0.04 | 3.3e-04 | 7.13 | -8.1 | 6.8e-16 | -0.40 | 0.22 | 0.05 | FALSE |
109 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ATP6V1E2 | 0.13 | 0.03 | blup | 76 | 0.04 | 3.8e-09 | 7.98 | -8.3 | 9.3e-17 | -0.42 | 0.98 | 0.02 | FALSE |
110 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CRIPT | 0.06 | 0.05 | enet | 11 | 0.06 | 8.0e-12 | 6.40 | 7.1 | 1.6e-12 | 0.40 | 1.00 | 0.00 | FALSE |
111 | The Cancer Genome Atlas | Colon Adenocarcinoma | ATP6V1E2 | 0.11 | 0.04 | blup | 75 | 0.06 | 2.0e-04 | 7.13 | -9.5 | 1.5e-21 | -0.39 | 0.09 | 0.86 | FALSE |
112 | The Cancer Genome Atlas | Colon Adenocarcinoma | CRIPT | 0.10 | 0.06 | blup | 66 | 0.07 | 5.6e-05 | 6.07 | 8.4 | 3.9e-17 | 0.39 | 0.47 | 0.24 | FALSE |
113 | The Cancer Genome Atlas | Esophageal Carcinoma | CRIPT | 0.20 | 0.10 | enet | 10 | 0.16 | 1.3e-05 | 6.09 | 8.5 | 1.6e-17 | 0.39 | 0.18 | 0.39 | FALSE |
114 | The Cancer Genome Atlas | Esophageal Carcinoma | PIGF | 0.20 | 0.04 | blup | 66 | 0.10 | 3.7e-04 | 0.15 | 5.5 | 4.4e-08 | 0.28 | 0.08 | 0.04 | TRUE |
115 | The Cancer Genome Atlas | Glioblastoma Multiforme | PPM1B | 0.14 | 0.04 | blup | 65 | 0.04 | 2.4e-02 | 3.62 | 10.8 | 4.0e-27 | 0.04 | 0.02 | 0.36 | TRUE |
116 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ATP6V1E2 | 0.09 | 0.07 | lasso | 3 | 0.07 | 5.6e-08 | 7.13 | -7.7 | 1.1e-14 | -0.36 | 0.85 | 0.14 | FALSE |
117 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PIGF | 0.10 | 0.06 | lasso | 3 | 0.07 | 1.7e-08 | 8.25 | 6.8 | 1.3e-11 | 0.38 | 1.00 | 0.00 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ABCG5 | 0.03 | 0.01 | blup | 75 | 0.02 | 3.0e-03 | 3.75 | -5.3 | 9.6e-08 | -0.07 | 0.04 | 0.25 | TRUE |
119 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ATP6V1E2 | 0.08 | 0.06 | lasso | 4 | 0.06 | 4.9e-07 | 7.12 | -7.2 | 5.1e-13 | -0.36 | 0.87 | 0.13 | FALSE |
120 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CRIPT | 0.13 | 0.12 | lasso | 5 | 0.11 | 5.5e-12 | 7.12 | 7.2 | 5.3e-13 | 0.36 | 1.00 | 0.00 | FALSE |
121 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PIGF | 0.08 | 0.06 | blup | 71 | 0.07 | 7.3e-08 | 8.25 | 6.8 | 1.1e-11 | 0.38 | 1.00 | 0.00 | FALSE |
122 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CRIPT | 0.11 | 0.11 | lasso | 3 | 0.10 | 1.7e-06 | 8.15 | 8.7 | 3.7e-18 | 0.40 | 0.85 | 0.11 | FALSE |
123 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ATP6V1E2 | 0.10 | 0.11 | enet | 9 | 0.12 | 1.4e-13 | 7.12 | -8.1 | 5.6e-16 | -0.39 | 1.00 | 0.00 | FALSE |
124 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CRIPT | 0.18 | 0.14 | lasso | 3 | 0.17 | 2.1e-18 | 7.12 | 7.1 | 1.1e-12 | 0.38 | 1.00 | 0.00 | FALSE |
125 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PIGF | 0.08 | 0.09 | enet | 14 | 0.09 | 9.7e-11 | 6.40 | 6.9 | 6.8e-12 | 0.26 | 1.00 | 0.00 | FALSE |
126 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SOCS5 | 0.09 | 0.03 | enet | 8 | 0.05 | 1.4e-06 | -4.93 | -5.3 | 1.3e-07 | 0.04 | 0.86 | 0.00 | TRUE |
127 | The Cancer Genome Atlas | Lung Adenocarcinoma | ATP6V1E2 | 0.12 | 0.08 | blup | 76 | 0.07 | 9.3e-09 | 7.12 | -8.0 | 1.0e-15 | -0.40 | 1.00 | 0.00 | TRUE |
128 | The Cancer Genome Atlas | Lung Adenocarcinoma | CRIPT | 0.07 | 0.08 | lasso | 2 | 0.08 | 3.6e-09 | 7.05 | 7.1 | 1.0e-12 | 0.33 | 1.00 | 0.00 | FALSE |
129 | The Cancer Genome Atlas | Lung Adenocarcinoma | PIGF | 0.06 | 0.06 | lasso | 4 | 0.05 | 4.4e-06 | 6.40 | 7.0 | 3.1e-12 | 0.34 | 0.94 | 0.00 | FALSE |
130 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | ATP6V1E2 | 0.07 | 0.04 | enet | 6 | 0.04 | 1.6e-05 | 7.12 | -8.6 | 5.7e-18 | -0.40 | 0.88 | 0.08 | FALSE |
131 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PIGF | 0.08 | 0.05 | enet | 15 | 0.06 | 9.8e-08 | 6.40 | 5.7 | 1.3e-08 | 0.29 | 0.93 | 0.00 | FALSE |
132 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | PIGF | 0.14 | 0.02 | blup | 66 | 0.08 | 8.6e-06 | 8.15 | 6.6 | 4.7e-11 | 0.38 | 0.25 | 0.17 | FALSE |
133 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ATP6V1E2 | 0.10 | 0.08 | lasso | 2 | 0.07 | 8.8e-04 | 7.12 | -7.8 | 5.6e-15 | -0.38 | 0.12 | 0.26 | FALSE |
134 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | CRIPT | 0.13 | 0.07 | enet | 13 | 0.10 | 7.9e-05 | 7.05 | 8.2 | 1.8e-16 | 0.42 | 0.10 | 0.34 | FALSE |
135 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CRIPT | 0.14 | 0.05 | blup | 66 | 0.07 | 8.2e-04 | 7.05 | 7.1 | 1.1e-12 | 0.40 | 0.10 | 0.54 | FALSE |
136 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ATP6V1E2 | 0.04 | 0.02 | lasso | 3 | 0.02 | 4.6e-03 | 9.94 | -9.9 | 3.5e-23 | -0.35 | 0.01 | 0.98 | FALSE |
137 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CRIPT | 0.13 | 0.13 | lasso | 3 | 0.15 | 1.2e-15 | 9.16 | 8.5 | 1.4e-17 | 0.43 | 1.00 | 0.00 | FALSE |
138 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PIGF | 0.07 | 0.09 | lasso | 3 | 0.08 | 2.2e-08 | 6.40 | 6.5 | 5.8e-11 | 0.30 | 1.00 | 0.00 | FALSE |
139 | The Cancer Genome Atlas | Rectum Adenocarcinoma | CRIPT | 0.25 | 0.10 | enet | 7 | 0.15 | 1.9e-04 | 6.09 | 7.1 | 9.1e-13 | 0.39 | 0.05 | 0.19 | FALSE |
140 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ATP6V1E2 | 0.11 | 0.12 | lasso | 2 | 0.11 | 1.0e-04 | 7.13 | -7.5 | 8.2e-14 | -0.35 | 0.04 | 0.42 | FALSE |
141 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | CRIPT | 0.13 | 0.09 | blup | 66 | 0.06 | 5.1e-03 | 6.32 | 7.2 | 5.6e-13 | 0.33 | 0.11 | 0.08 | FALSE |
142 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | PIGF | 0.18 | 0.10 | enet | 7 | 0.08 | 9.3e-04 | 6.40 | 7.7 | 1.4e-14 | 0.39 | 0.13 | 0.13 | FALSE |
143 | The Cancer Genome Atlas | Thyroid Carcinoma | ATP6V1E2 | 0.20 | 0.14 | lasso | 6 | 0.13 | 5.4e-13 | 7.12 | -7.5 | 8.9e-14 | -0.36 | 1.00 | 0.00 | FALSE |
144 | The Cancer Genome Atlas | Thyroid Carcinoma | C2orf34 | 0.05 | 0.03 | lasso | 2 | 0.03 | 4.9e-04 | 4.91 | 5.3 | 1.4e-07 | 0.00 | 0.14 | 0.10 | TRUE |
145 | The Cancer Genome Atlas | Thyroid Carcinoma | CRIPT | 0.11 | 0.10 | lasso | 4 | 0.11 | 1.6e-10 | 6.09 | 7.1 | 1.3e-12 | 0.37 | 1.00 | 0.00 | FALSE |