Best TWAS P=7.95e-172 · Best GWAS P=0 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CCDC66 | 0.25 | 0.12 | lasso | 9 | 0.19 | 1.8e-22 | 15.50 | -16.4 | 1.6e-60 | 0.12 | 1.00 | 0.00 | TRUE |
2 | CommonMind | Brain Pre-frontal Cortex | ERC2 | 0.12 | 0.00 | bslmm | 972 | 0.04 | 1.8e-05 | 10.68 | 8.6 | 8.5e-18 | -0.15 | 0.59 | 0.03 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | FLNB | 0.05 | 0.03 | lasso | 6 | 0.05 | 2.0e-06 | -4.60 | -7.2 | 4.1e-13 | 0.03 | 0.55 | 0.01 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | KCTD6 | 0.05 | 0.02 | lasso | 9 | 0.01 | 8.1e-03 | -13.38 | -12.3 | 6.2e-35 | -0.03 | 0.28 | 0.32 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | PDHB | 0.12 | 0.08 | bslmm | 436 | 0.10 | 5.1e-12 | -13.15 | -13.3 | 2.9e-40 | 0.02 | 0.09 | 0.91 | FALSE |
6 | CommonMind | Brain Pre-frontal Cortex | PXK | 0.12 | 0.00 | bslmm | 473 | 0.03 | 1.9e-04 | -17.82 | -12.4 | 2.9e-35 | -0.02 | 0.01 | 0.97 | FALSE |
7 | CommonMind | Brain Pre-frontal Cortex | RPP14 | 0.08 | 0.05 | lasso | 4 | 0.08 | 1.3e-09 | -17.88 | -16.6 | 1.1e-61 | 0.04 | 0.01 | 0.99 | FALSE |
8 | GTEx | Adipose Subcutaneous | FAM208A | 0.12 | 0.09 | enet | 11 | 0.12 | 1.1e-09 | 16.21 | -12.9 | 2.7e-38 | -0.06 | 1.00 | 0.00 | FALSE |
9 | GTEx | Adipose Subcutaneous | PXK | 0.09 | 0.05 | lasso | 4 | 0.04 | 2.1e-04 | 5.79 | -5.1 | 2.8e-07 | -0.11 | 0.82 | 0.04 | TRUE |
10 | GTEx | Adipose Subcutaneous | CCDC66 | 0.23 | 0.07 | lasso | 2 | 0.12 | 7.0e-10 | 15.50 | -10.7 | 1.2e-26 | -0.02 | 1.00 | 0.00 | FALSE |
11 | GTEx | Adipose Visceral Omentum | ABHD6 | 0.15 | 0.00 | lasso | 7 | 0.00 | 2.6e-01 | 10.59 | 14.7 | 1.0e-48 | -0.04 | 0.02 | 0.78 | FALSE |
12 | GTEx | Adrenal Gland | PXK | 0.18 | 0.10 | lasso | 4 | 0.07 | 2.4e-03 | 11.14 | 10.8 | 3.5e-27 | -0.13 | 0.51 | 0.04 | FALSE |
13 | GTEx | Artery Aorta | PDHB | 0.22 | 0.00 | enet | 24 | 0.03 | 9.5e-03 | -8.49 | -10.7 | 6.4e-27 | 0.01 | 0.18 | 0.21 | FALSE |
14 | GTEx | Artery Aorta | PXK | 0.26 | 0.00 | lasso | 13 | 0.02 | 2.3e-02 | 8.26 | 7.1 | 1.2e-12 | -0.16 | 0.16 | 0.04 | FALSE |
15 | GTEx | Artery Aorta | CCDC66 | 0.21 | 0.22 | lasso | 3 | 0.20 | 4.1e-11 | 15.50 | -15.3 | 1.1e-52 | 0.01 | 1.00 | 0.00 | FALSE |
16 | GTEx | Artery Aorta | RP11-802O23.3 | 0.14 | 0.00 | enet | 28 | 0.03 | 6.5e-03 | -9.32 | -8.4 | 5.9e-17 | 0.02 | 0.15 | 0.12 | FALSE |
17 | GTEx | Artery Coronary | CCDC66 | 0.35 | 0.12 | enet | 37 | 0.11 | 1.4e-04 | 15.50 | -18.0 | 1.4e-72 | 0.03 | 0.13 | 0.04 | TRUE |
18 | GTEx | Artery Coronary | RP11-802O23.3 | 0.24 | 0.21 | lasso | 6 | 0.18 | 7.5e-07 | -7.06 | -8.6 | 8.3e-18 | 0.02 | 0.40 | 0.14 | TRUE |
19 | GTEx | Artery Tibial | PDHB | 0.12 | 0.11 | lasso | 6 | 0.11 | 7.4e-09 | 11.93 | -7.5 | 7.1e-14 | 0.09 | 1.00 | 0.00 | FALSE |
20 | GTEx | Artery Tibial | CCDC66 | 0.32 | 0.22 | lasso | 5 | 0.25 | 1.6e-19 | 15.50 | -10.2 | 1.7e-24 | -0.01 | 1.00 | 0.00 | FALSE |
21 | GTEx | Artery Tibial | RP11-802O23.3 | 0.12 | 0.06 | lasso | 3 | 0.06 | 1.2e-05 | 11.93 | -10.1 | 3.7e-24 | 0.03 | 0.95 | 0.00 | FALSE |
22 | GTEx | Brain Caudate basal ganglia | CCDC66 | 0.18 | 0.16 | lasso | 5 | 0.16 | 3.3e-05 | 15.50 | -16.4 | 1.9e-60 | -0.02 | 0.30 | 0.04 | FALSE |
23 | GTEx | Brain Caudate basal ganglia | FLNB-AS1 | 0.17 | 0.04 | lasso | 7 | 0.10 | 8.7e-04 | -3.96 | -5.8 | 7.6e-09 | 0.11 | 0.29 | 0.04 | FALSE |
24 | GTEx | Brain Cerebellar Hemisphere | PDHB | 0.21 | 0.13 | lasso | 4 | 0.07 | 7.6e-03 | -17.86 | -17.4 | 1.9e-67 | -0.03 | 0.01 | 0.95 | FALSE |
25 | GTEx | Brain Cerebellar Hemisphere | PXK | 0.25 | 0.02 | lasso | 12 | 0.04 | 2.7e-02 | -8.44 | -9.8 | 8.5e-23 | 0.02 | 0.08 | 0.64 | FALSE |
26 | GTEx | Brain Cerebellar Hemisphere | RP11-802O23.3 | 0.32 | 0.05 | enet | 18 | 0.12 | 5.6e-04 | 8.26 | -15.1 | 1.2e-51 | 0.01 | 0.01 | 0.94 | TRUE |
27 | GTEx | Brain Cerebellum | PDHB | 0.20 | 0.03 | enet | 20 | 0.10 | 5.8e-04 | -17.84 | -14.6 | 2.8e-48 | 0.05 | 0.02 | 0.78 | FALSE |
28 | GTEx | Brain Cerebellum | CCDC66 | 0.27 | 0.13 | enet | 14 | 0.18 | 6.3e-06 | 15.50 | -15.3 | 5.9e-53 | -0.01 | 0.71 | 0.02 | FALSE |
29 | GTEx | Brain Cerebellum | RP11-802O23.3 | 0.20 | 0.05 | enet | 13 | 0.19 | 3.4e-06 | 11.22 | -12.6 | 3.3e-36 | 0.07 | 0.05 | 0.78 | FALSE |
30 | GTEx | Brain Cortex | CCDC66 | 0.18 | 0.24 | lasso | 1 | 0.20 | 3.8e-06 | 15.50 | -15.5 | 3.3e-54 | 0.02 | 0.27 | 0.04 | FALSE |
31 | GTEx | Brain Cortex | RP11-802O23.3 | 0.34 | 0.06 | lasso | 7 | 0.05 | 1.8e-02 | -17.87 | -17.2 | 3.0e-66 | -0.02 | 0.01 | 0.89 | FALSE |
32 | GTEx | Brain Frontal Cortex BA9 | CCDC66 | 0.16 | 0.18 | lasso | 3 | 0.14 | 1.3e-04 | 15.50 | -16.9 | 2.4e-64 | 0.02 | 0.24 | 0.05 | FALSE |
33 | GTEx | Brain Hippocampus | CCDC66 | 0.23 | 0.23 | lasso | 3 | 0.20 | 2.1e-05 | 12.34 | -13.8 | 1.7e-43 | -0.06 | 0.28 | 0.04 | FALSE |
34 | GTEx | Brain Hypothalamus | ARHGEF3 | 0.30 | 0.00 | enet | 31 | 0.05 | 2.9e-02 | -18.36 | 7.9 | 2.9e-15 | -0.14 | 0.07 | 0.07 | FALSE |
35 | GTEx | Brain Hypothalamus | CCDC66 | 0.18 | 0.26 | lasso | 3 | 0.22 | 5.6e-06 | 15.50 | -14.9 | 1.7e-50 | 0.02 | 0.17 | 0.05 | FALSE |
36 | GTEx | Brain Nucleus accumbens basal ganglia | PDHB | 0.24 | 0.01 | enet | 33 | 0.00 | 2.7e-01 | 3.90 | -8.6 | 1.2e-17 | 0.08 | 0.07 | 0.10 | FALSE |
37 | GTEx | Brain Putamen basal ganglia | CCDC66 | 0.36 | 0.28 | lasso | 3 | 0.25 | 1.3e-06 | 15.50 | -16.2 | 4.6e-59 | 0.02 | 0.18 | 0.05 | FALSE |
38 | GTEx | Breast Mammary Tissue | PXK | 0.16 | 0.05 | enet | 18 | 0.06 | 6.7e-04 | 8.02 | 6.5 | 1.0e-10 | -0.13 | 0.49 | 0.02 | FALSE |
39 | GTEx | Breast Mammary Tissue | CCDC66 | 0.19 | 0.21 | lasso | 3 | 0.19 | 5.7e-10 | 15.50 | -15.5 | 7.5e-54 | 0.01 | 1.00 | 0.00 | FALSE |
40 | GTEx | Breast Mammary Tissue (Male) | CCDC66 | 0.05 | 0.03 | lasso | 3 | 0.04 | 5.1e-02 | 10.31 | -8.1 | 8.6e-16 | -0.06 | 0.05 | 0.06 | FALSE |
41 | GTEx | Breast Mammary Tissue (Female) | CCDC66 | 0.16 | 0.06 | enet | 10 | 0.14 | 4.3e-05 | 15.50 | -16.8 | 3.0e-63 | 0.06 | 0.17 | 0.05 | FALSE |
42 | GTEx | Cells EBV-transformed lymphocytes | PDHB | 0.21 | 0.10 | enet | 9 | 0.06 | 5.1e-03 | -9.36 | -7.2 | 7.2e-13 | -0.02 | 0.14 | 0.06 | FALSE |
43 | GTEx | Cells EBV-transformed lymphocytes | CCDC66 | 0.45 | 0.27 | enet | 37 | 0.29 | 3.7e-10 | -8.58 | -8.3 | 8.9e-17 | -0.03 | 0.99 | 0.00 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | FAM208A | 0.10 | 0.00 | lasso | 4 | 0.00 | 1.3e-01 | 8.05 | -8.7 | 4.1e-18 | -0.07 | 0.34 | 0.05 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | PDHB | 0.18 | 0.08 | enet | 14 | 0.08 | 1.1e-06 | 11.93 | -10.0 | 1.4e-23 | 0.14 | 0.98 | 0.00 | FALSE |
46 | GTEx | Cells Transformed fibroblasts | PXK | 0.12 | 0.13 | lasso | 9 | 0.12 | 2.6e-09 | 5.79 | 5.9 | 4.6e-09 | 0.10 | 1.00 | 0.00 | FALSE |
47 | GTEx | Cells Transformed fibroblasts | CCDC66 | 0.13 | 0.07 | enet | 15 | 0.10 | 9.3e-08 | 15.50 | -8.9 | 4.7e-19 | -0.02 | 0.70 | 0.01 | TRUE |
48 | GTEx | Cells Transformed fibroblasts | RP11-755B10.4 | 0.09 | 0.02 | enet | 14 | 0.05 | 1.0e-04 | 5.77 | 5.2 | 1.8e-07 | 0.00 | 0.23 | 0.07 | FALSE |
49 | GTEx | Cells Transformed fibroblasts | RP11-802O23.3 | 0.13 | 0.06 | lasso | 4 | 0.05 | 7.0e-05 | 11.93 | -12.6 | 1.7e-36 | 0.11 | 0.79 | 0.03 | FALSE |
50 | GTEx | Colon Sigmoid | RP11-755B10.4 | 0.20 | 0.17 | lasso | 5 | 0.16 | 3.3e-06 | 7.06 | 7.8 | 4.7e-15 | -0.03 | 0.07 | 0.90 | TRUE |
51 | GTEx | Colon Transverse | RPP14 | 0.20 | 0.11 | lasso | 4 | 0.12 | 2.6e-06 | 9.83 | -10.1 | 4.5e-24 | 0.10 | 0.71 | 0.05 | FALSE |
52 | GTEx | Colon Transverse | PDHB | 0.15 | 0.09 | lasso | 7 | 0.07 | 3.6e-04 | 11.90 | -11.7 | 1.6e-31 | 0.06 | 0.12 | 0.53 | FALSE |
53 | GTEx | Colon Transverse | RP11-802O23.3 | 0.17 | 0.03 | enet | 21 | 0.03 | 1.8e-02 | 11.90 | -13.2 | 4.5e-40 | 0.03 | 0.05 | 0.66 | FALSE |
54 | GTEx | Esophagus Mucosa | ABHD6 | 0.06 | 0.06 | lasso | 2 | 0.03 | 2.5e-03 | 8.94 | -10.0 | 1.4e-23 | 0.03 | 0.34 | 0.09 | FALSE |
55 | GTEx | Esophagus Mucosa | ARHGEF3 | 0.12 | 0.06 | enet | 13 | 0.03 | 2.7e-03 | -2.63 | -16.5 | 1.9e-61 | 0.07 | 0.15 | 0.06 | FALSE |
56 | GTEx | Esophagus Mucosa | CCDC66 | 0.23 | 0.14 | lasso | 3 | 0.17 | 2.9e-11 | 15.50 | -10.6 | 5.0e-26 | 0.00 | 0.99 | 0.00 | FALSE |
57 | GTEx | Esophagus Muscularis | ABHD6 | 0.11 | 0.01 | enet | 13 | 0.03 | 6.6e-03 | 3.40 | -6.6 | 5.4e-11 | -0.02 | 0.14 | 0.51 | FALSE |
58 | GTEx | Esophagus Muscularis | CCDC66 | 0.27 | 0.25 | lasso | 6 | 0.26 | 8.0e-16 | 15.50 | -15.1 | 1.4e-51 | 0.05 | 1.00 | 0.00 | FALSE |
59 | GTEx | Heart Atrial Appendage | RPP14 | 0.38 | 0.24 | lasso | 8 | 0.22 | 4.0e-10 | 9.92 | -9.2 | 4.3e-20 | 0.10 | 1.00 | 0.00 | FALSE |
60 | GTEx | Heart Atrial Appendage | ACOX2 | 0.13 | 0.00 | enet | 11 | 0.02 | 5.9e-02 | 6.62 | -10.1 | 4.9e-24 | -0.01 | 0.08 | 0.46 | FALSE |
61 | GTEx | Heart Atrial Appendage | CCDC66 | 0.29 | 0.20 | enet | 29 | 0.20 | 2.4e-09 | 15.50 | -15.4 | 2.6e-53 | 0.12 | 0.92 | 0.01 | FALSE |
62 | GTEx | Heart Left Ventricle | RPP14 | 0.23 | 0.23 | enet | 19 | 0.24 | 4.6e-13 | 9.85 | -6.6 | 3.2e-11 | 0.13 | 1.00 | 0.00 | FALSE |
63 | GTEx | Heart Left Ventricle | CCDC66 | 0.18 | 0.17 | lasso | 3 | 0.18 | 5.2e-10 | 15.50 | -14.0 | 2.4e-44 | -0.01 | 0.97 | 0.00 | FALSE |
64 | GTEx | Liver | PXK | 0.24 | 0.00 | enet | 5 | 0.02 | 9.2e-02 | -5.15 | -7.7 | 1.6e-14 | -0.04 | 0.27 | 0.17 | FALSE |
65 | GTEx | Lung | PDHB | 0.10 | 0.10 | lasso | 2 | 0.07 | 3.5e-06 | 11.09 | -11.9 | 8.1e-33 | 0.14 | 0.97 | 0.03 | FALSE |
66 | GTEx | Lung | CCDC66 | 0.13 | 0.15 | lasso | 2 | 0.15 | 1.4e-11 | 15.50 | -15.4 | 1.0e-53 | 0.02 | 1.00 | 0.00 | FALSE |
67 | GTEx | Lung | RP11-755B10.4 | 0.08 | 0.03 | enet | 11 | 0.04 | 3.4e-04 | 6.42 | 7.3 | 3.2e-13 | -0.10 | 0.66 | 0.02 | FALSE |
68 | GTEx | Muscle Skeletal | RPP14 | 0.26 | 0.17 | lasso | 5 | 0.19 | 2.0e-18 | 9.85 | -10.4 | 3.1e-25 | 0.10 | 1.00 | 0.00 | FALSE |
69 | GTEx | Muscle Skeletal | PDHB | 0.12 | 0.13 | lasso | 4 | 0.14 | 3.2e-13 | 11.20 | -14.8 | 9.1e-50 | 0.11 | 0.98 | 0.02 | FALSE |
70 | GTEx | Muscle Skeletal | PXK | 0.07 | 0.04 | lasso | 6 | 0.03 | 6.0e-04 | 4.24 | 5.8 | 9.2e-09 | -0.15 | 0.84 | 0.01 | FALSE |
71 | GTEx | Muscle Skeletal | CCDC66 | 0.22 | 0.10 | enet | 21 | 0.16 | 3.6e-15 | 15.50 | -6.0 | 2.1e-09 | -0.07 | 1.00 | 0.00 | FALSE |
72 | GTEx | Muscle Skeletal | RP11-802O23.3 | 0.12 | 0.14 | lasso | 6 | 0.14 | 7.9e-14 | 11.09 | -14.1 | 4.4e-45 | 0.12 | 1.00 | 0.00 | FALSE |
73 | GTEx | Nerve Tibial | ABHD6 | 0.24 | 0.15 | enet | 28 | 0.16 | 1.3e-11 | 8.94 | -8.9 | 6.2e-19 | 0.06 | 1.00 | 0.00 | FALSE |
74 | GTEx | Nerve Tibial | PXK | 0.47 | 0.27 | enet | 34 | 0.30 | 1.7e-21 | 11.22 | 9.4 | 6.9e-21 | -0.14 | 1.00 | 0.00 | FALSE |
75 | GTEx | Nerve Tibial | CCDC66 | 0.30 | 0.27 | lasso | 4 | 0.27 | 2.1e-19 | 15.50 | -14.2 | 5.5e-46 | 0.03 | 1.00 | 0.00 | FALSE |
76 | GTEx | Nerve Tibial | FLNB-AS1 | 0.12 | 0.03 | lasso | 6 | 0.02 | 8.2e-03 | 2.02 | -7.8 | 4.4e-15 | -0.04 | 0.13 | 0.19 | FALSE |
77 | GTEx | Ovary | CCDC66 | 0.47 | 0.22 | lasso | 7 | 0.14 | 2.5e-04 | 15.50 | -13.4 | 7.8e-41 | 0.00 | 0.08 | 0.05 | FALSE |
78 | GTEx | Ovary | RP11-755B10.4 | 0.24 | 0.21 | lasso | 8 | 0.19 | 2.4e-05 | -4.65 | 5.2 | 2.1e-07 | -0.06 | 0.11 | 0.09 | TRUE |
79 | GTEx | Pancreas | PXK | 0.14 | 0.08 | enet | 18 | 0.11 | 2.6e-05 | 11.09 | 10.5 | 7.3e-26 | -0.12 | 0.79 | 0.01 | TRUE |
80 | GTEx | Pancreas | CCDC66 | 0.19 | 0.16 | lasso | 3 | 0.15 | 9.1e-07 | 15.50 | -15.5 | 4.0e-54 | 0.02 | 0.45 | 0.05 | FALSE |
81 | GTEx | Pituitary | PXK | 0.31 | 0.11 | lasso | 7 | 0.09 | 2.8e-03 | 11.93 | 5.9 | 3.0e-09 | -0.12 | 0.37 | 0.04 | FALSE |
82 | GTEx | Pituitary | CCDC66 | 0.16 | 0.16 | enet | 31 | 0.12 | 6.8e-04 | 15.50 | -16.2 | 3.0e-59 | 0.08 | 0.26 | 0.04 | FALSE |
83 | GTEx | Skin Sun Exposed Lower leg | ABHD6 | 0.08 | 0.01 | enet | 32 | 0.03 | 7.5e-04 | 2.39 | -9.0 | 1.5e-19 | 0.00 | 0.16 | 0.29 | FALSE |
84 | GTEx | Skin Sun Exposed Lower leg | FAM208A | 0.06 | 0.04 | lasso | 2 | 0.03 | 2.0e-03 | 12.72 | -11.9 | 1.2e-32 | -0.08 | 0.35 | 0.09 | FALSE |
85 | GTEx | Skin Sun Exposed Lower leg | PDHB | 0.18 | 0.12 | lasso | 5 | 0.10 | 1.0e-08 | 11.22 | -11.7 | 1.2e-31 | 0.14 | 1.00 | 0.00 | FALSE |
86 | GTEx | Skin Sun Exposed Lower leg | CCDC66 | 0.09 | 0.09 | lasso | 5 | 0.05 | 8.1e-05 | 15.50 | -15.5 | 6.6e-54 | 0.02 | 0.94 | 0.00 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | RP11-802O23.3 | 0.13 | 0.10 | lasso | 3 | 0.10 | 1.1e-08 | 11.14 | -11.2 | 2.9e-29 | 0.14 | 0.99 | 0.00 | FALSE |
88 | GTEx | Small Intestine Terminal Ileum | PXK | 0.36 | 0.24 | lasso | 7 | 0.18 | 9.2e-05 | 7.44 | 5.8 | 9.1e-09 | -0.02 | 0.17 | 0.05 | FALSE |
89 | GTEx | Spleen | PXK | 0.33 | 0.13 | lasso | 18 | 0.18 | 2.2e-05 | 8.02 | 5.8 | 8.8e-09 | -0.11 | 0.47 | 0.03 | FALSE |
90 | GTEx | Spleen | CCDC66 | 0.31 | 0.22 | lasso | 10 | 0.20 | 1.0e-05 | 15.50 | -16.1 | 4.3e-58 | 0.00 | 0.16 | 0.08 | TRUE |
91 | GTEx | Stomach | RPP14 | 0.13 | 0.06 | lasso | 6 | 0.04 | 5.5e-03 | 11.14 | -11.2 | 6.2e-29 | 0.14 | 0.28 | 0.05 | FALSE |
92 | GTEx | Stomach | FAM208A | 0.30 | 0.00 | enet | 20 | 0.03 | 1.0e-02 | -8.30 | 17.6 | 5.6e-69 | -0.38 | 0.08 | 0.20 | TRUE |
93 | GTEx | Stomach | CCDC66 | 0.16 | 0.06 | lasso | 4 | 0.06 | 8.5e-04 | 15.50 | -14.9 | 2.4e-50 | 0.00 | 0.19 | 0.04 | FALSE |
94 | GTEx | Testis | PDHB | 0.14 | 0.16 | lasso | 2 | 0.12 | 4.2e-06 | 11.15 | -9.5 | 2.9e-21 | 0.16 | 0.94 | 0.00 | TRUE |
95 | GTEx | Testis | CCDC66 | 0.20 | 0.01 | enet | 31 | 0.01 | 1.2e-01 | -0.46 | -11.3 | 1.2e-29 | 0.18 | 0.09 | 0.15 | FALSE |
96 | GTEx | Thyroid | CCDC66 | 0.22 | 0.26 | lasso | 4 | 0.26 | 5.9e-20 | 15.50 | -15.5 | 5.8e-54 | 0.02 | 1.00 | 0.00 | FALSE |
97 | GTEx | Thyroid | RP11-802O23.3 | 0.06 | 0.05 | lasso | 4 | 0.04 | 9.9e-04 | -17.88 | -17.8 | 3.6e-71 | -0.02 | 0.01 | 0.99 | TRUE |
98 | GTEx | Whole Blood | PXK | 0.06 | 0.06 | lasso | 1 | 0.06 | 2.3e-06 | 5.99 | -6.0 | 2.1e-09 | -0.10 | 0.89 | 0.04 | FALSE |
99 | METSIM | Adipose | ACOX2 | 0.06 | 0.02 | bslmm | 419 | 0.02 | 1.3e-04 | 8.26 | -8.3 | 7.3e-17 | 0.06 | 0.34 | 0.07 | FALSE |
100 | METSIM | Adipose | APPL1 | 0.04 | 0.00 | blup | 416 | 0.02 | 2.1e-04 | -54.77 | 27.9 | 7.9e-172 | -0.41 | 0.05 | 0.41 | TRUE |
101 | METSIM | Adipose | CCDC66 | 0.09 | 0.01 | enet | 8 | 0.05 | 1.8e-07 | -2.05 | -10.0 | 2.4e-23 | -0.03 | 0.51 | 0.02 | FALSE |
102 | METSIM | Adipose | DNASE1L3 | 0.09 | 0.01 | enet | 14 | 0.06 | 4.1e-09 | 5.58 | -8.0 | 9.4e-16 | 0.08 | 0.87 | 0.12 | FALSE |
103 | METSIM | Adipose | RP11-359I18.5 | 0.05 | 0.05 | lasso | 6 | 0.05 | 8.1e-08 | 8.25 | -8.2 | 1.6e-16 | 0.11 | 0.91 | 0.06 | FALSE |
104 | NTR | Blood | ARHGEF3 | 0.04 | 0.01 | enet | 21 | 0.01 | 9.1e-06 | -6.28 | -14.8 | 8.7e-50 | -0.08 | 0.86 | 0.00 | FALSE |
105 | NTR | Blood | C3orf63 | 0.02 | 0.01 | enet | 17 | 0.02 | 2.0e-06 | 11.65 | 15.3 | 4.3e-53 | -0.01 | 0.92 | 0.01 | TRUE |
106 | NTR | Blood | DNASE1L3 | 0.03 | 0.02 | lasso | 4 | 0.03 | 3.2e-09 | 10.54 | -10.0 | 1.4e-23 | 0.11 | 1.00 | 0.00 | FALSE |
107 | NTR | Blood | RPP14 | 0.01 | 0.01 | lasso | 1 | 0.01 | 2.2e-03 | 7.66 | 7.7 | 1.9e-14 | 0.11 | 0.66 | 0.19 | FALSE |
108 | ROSMAP | Brain Pre-frontal Cortex | FLNB | 0.07 | 0.06 | bslmm | 496 | 0.06 | 3.4e-08 | 2.02 | -5.6 | 2.7e-08 | -0.04 | 1.00 | 0.00 | FALSE |
109 | ROSMAP | Brain Pre-frontal Cortex | ABHD6 | 0.10 | 0.01 | bslmm | 456 | 0.07 | 8.8e-09 | -5.92 | 10.6 | 3.3e-26 | -0.06 | 0.80 | 0.19 | FALSE |
110 | ROSMAP | Brain Pre-frontal Cortex | PDHB | 0.21 | 0.24 | lasso | 4 | 0.30 | 1.1e-38 | -13.39 | -16.3 | 6.2e-60 | 0.04 | 0.79 | 0.21 | FALSE |
111 | ROSMAP | Brain Pre-frontal Cortex | DNAH12 | 0.04 | 0.00 | blup | 448 | 0.02 | 1.0e-03 | -2.04 | -10.3 | 6.3e-25 | 0.12 | 0.19 | 0.05 | FALSE |
112 | ROSMAP | Brain Pre-frontal Cortex | CCDC66 | 0.24 | 0.24 | lasso | 6 | 0.25 | 1.0e-31 | 15.50 | -16.9 | 2.6e-64 | 0.06 | 1.00 | 0.00 | FALSE |
113 | YFS | Blood | ABHD6 | 0.02 | 0.02 | lasso | 4 | 0.02 | 8.4e-07 | -14.80 | -11.8 | 3.4e-32 | 0.00 | 0.73 | 0.25 | FALSE |
114 | YFS | Blood | ARHGEF3 | 0.13 | 0.04 | bslmm | 536 | 0.07 | 1.5e-20 | 11.18 | -21.7 | 4.4e-104 | 0.15 | 1.00 | 0.00 | FALSE |
115 | YFS | Blood | CCDC66 | 0.11 | 0.09 | lasso | 8 | 0.11 | 6.0e-34 | -8.55 | -7.7 | 1.5e-14 | -0.03 | 1.00 | 0.00 | FALSE |
116 | YFS | Blood | DNASE1L3 | 0.13 | 0.09 | lasso | 9 | 0.11 | 9.2e-35 | 10.54 | -10.1 | 4.6e-24 | 0.11 | 1.00 | 0.00 | FALSE |
117 | YFS | Blood | PDHB | 0.12 | 0.09 | lasso | 10 | 0.15 | 2.5e-46 | -13.33 | -13.8 | 2.2e-43 | 0.09 | 1.00 | 0.00 | FALSE |
118 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | PDHB | 0.05 | 0.03 | blup | 40 | 0.06 | 1.4e-05 | 11.12 | -7.1 | 1.2e-12 | 0.12 | 0.50 | 0.02 | FALSE |
119 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CCDC66 | 0.09 | 0.03 | lasso | 8 | 0.05 | 4.2e-11 | -9.56 | -7.8 | 6.1e-15 | 0.07 | 0.99 | 0.00 | FALSE |
120 | The Cancer Genome Atlas | Breast Invasive Carcinoma | DNAH12 | 0.03 | 0.02 | enet | 17 | 0.01 | 2.3e-03 | 3.68 | 5.5 | 2.9e-08 | -0.11 | 0.52 | 0.01 | TRUE |
121 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PXK | 0.02 | 0.01 | blup | 86 | 0.02 | 1.5e-04 | -2.22 | -7.4 | 1.3e-13 | 0.08 | 0.06 | 0.02 | FALSE |
122 | The Cancer Genome Atlas | Colon Adenocarcinoma | ABHD6 | 0.05 | 0.05 | enet | 6 | 0.04 | 1.9e-03 | 9.85 | 11.0 | 6.4e-28 | -0.08 | 0.12 | 0.07 | FALSE |
123 | The Cancer Genome Atlas | Colon Adenocarcinoma | ACOX2 | 0.17 | 0.00 | enet | 12 | 0.05 | 4.7e-04 | -7.06 | -6.4 | 1.2e-10 | 0.02 | 0.04 | 0.04 | FALSE |
124 | The Cancer Genome Atlas | Colon Adenocarcinoma | CCDC66 | 0.14 | 0.12 | lasso | 2 | 0.10 | 1.2e-06 | -9.46 | -9.5 | 3.0e-21 | -0.05 | 0.74 | 0.01 | FALSE |
125 | The Cancer Genome Atlas | Esophageal Carcinoma | PDHB | 0.11 | 0.09 | enet | 13 | 0.10 | 4.9e-04 | 11.15 | -10.6 | 2.2e-26 | 0.14 | 0.12 | 0.04 | FALSE |
126 | The Cancer Genome Atlas | Glioblastoma Multiforme | CCDC66 | 0.19 | 0.02 | enet | 14 | 0.12 | 1.7e-04 | 9.87 | -13.4 | 1.0e-40 | 0.09 | 0.04 | 0.08 | FALSE |
127 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PDHB | 0.10 | 0.08 | blup | 40 | 0.09 | 2.3e-10 | 8.56 | -11.2 | 6.9e-29 | 0.08 | 1.00 | 0.00 | FALSE |
128 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C3orf63 | 0.03 | 0.01 | enet | 4 | 0.01 | 1.3e-02 | 8.06 | -12.6 | 2.7e-36 | -0.03 | 0.01 | 0.91 | TRUE |
129 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PDHB | 0.05 | 0.03 | enet | 10 | 0.06 | 4.3e-07 | 11.14 | -6.2 | 5.8e-10 | 0.15 | 0.99 | 0.00 | FALSE |
130 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ABHD6 | 0.09 | 0.07 | lasso | 3 | 0.03 | 4.3e-03 | -17.88 | -16.8 | 2.5e-63 | -0.04 | 0.00 | 0.98 | FALSE |
131 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | RPP14 | 0.77 | 0.06 | enet | 18 | 0.17 | 3.6e-10 | 9.83 | -6.3 | 2.5e-10 | 0.09 | 0.70 | 0.02 | FALSE |
132 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CCDC66 | 0.16 | 0.13 | enet | 12 | 0.16 | 3.1e-17 | -8.55 | -11.8 | 6.9e-32 | 0.01 | 1.00 | 0.00 | FALSE |
133 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PDHB | 0.17 | 0.10 | enet | 17 | 0.12 | 5.0e-14 | 11.15 | -14.9 | 2.2e-50 | 0.10 | 1.00 | 0.00 | FALSE |
134 | The Cancer Genome Atlas | Lung Adenocarcinoma | PDHB | 0.04 | 0.04 | lasso | 3 | 0.04 | 2.3e-05 | 11.20 | -10.3 | 1.1e-24 | 0.15 | 0.85 | 0.00 | FALSE |
135 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CCDC66 | 0.03 | 0.03 | blup | 56 | 0.03 | 9.6e-05 | -9.46 | -8.4 | 2.8e-17 | -0.02 | 0.45 | 0.02 | FALSE |
136 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | DNASE1L3 | 0.05 | 0.05 | blup | 58 | 0.06 | 2.5e-07 | 11.96 | -14.4 | 3.8e-47 | 0.06 | 0.13 | 0.87 | FALSE |
137 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PDHB | 0.05 | 0.03 | blup | 40 | 0.05 | 1.2e-06 | 11.15 | -7.9 | 3.9e-15 | 0.13 | 0.96 | 0.00 | TRUE |
138 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | FAM116A | 0.17 | 0.11 | enet | 3 | 0.10 | 6.7e-05 | 5.77 | 5.8 | 8.6e-09 | 0.04 | 0.02 | 0.75 | FALSE |
139 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CCDC66 | 0.08 | 0.01 | blup | 56 | 0.07 | 7.2e-04 | -8.55 | -12.6 | 3.1e-36 | -0.01 | 0.12 | 0.07 | FALSE |
140 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | HESX1 | 0.08 | 0.05 | blup | 29 | 0.04 | 1.1e-02 | -4.63 | -5.3 | 1.3e-07 | -0.01 | 0.02 | 0.05 | FALSE |
141 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CCDC66 | 0.15 | 0.10 | enet | 11 | 0.13 | 7.3e-14 | -9.46 | -10.2 | 1.8e-24 | 0.05 | 1.00 | 0.00 | FALSE |
142 | The Cancer Genome Atlas | Prostate Adenocarcinoma | DNASE1L3 | 0.04 | 0.01 | enet | 4 | 0.02 | 3.4e-03 | 9.93 | -6.2 | 7.5e-10 | 0.12 | 0.05 | 0.03 | TRUE |
143 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FLNB | 0.04 | 0.03 | enet | 6 | 0.03 | 3.0e-04 | -4.52 | 5.4 | 7.5e-08 | -0.08 | 0.55 | 0.09 | FALSE |
144 | The Cancer Genome Atlas | Prostate Adenocarcinoma | RPP14 | 0.04 | 0.03 | lasso | 2 | 0.02 | 1.9e-03 | -13.15 | 12.9 | 2.8e-38 | 0.00 | 0.14 | 0.24 | FALSE |
145 | The Cancer Genome Atlas | Rectum Adenocarcinoma | CCDC66 | 0.20 | -0.01 | lasso | 3 | 0.00 | 3.0e-01 | -9.46 | -7.4 | 1.2e-13 | -0.03 | 0.03 | 0.05 | FALSE |
146 | The Cancer Genome Atlas | Stomach Adenocarcinoma | CCDC66 | 0.05 | 0.01 | blup | 57 | 0.02 | 8.4e-03 | -9.56 | -8.4 | 5.7e-17 | 0.01 | 0.15 | 0.03 | TRUE |
147 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | PDHB | 0.25 | 0.27 | lasso | 11 | 0.29 | 1.1e-10 | 8.56 | -6.5 | 7.3e-11 | 0.12 | 0.99 | 0.00 | FALSE |
148 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | PXK | 0.09 | 0.05 | enet | 23 | 0.08 | 7.4e-04 | -4.52 | -6.1 | 9.3e-10 | -0.02 | 0.06 | 0.09 | FALSE |
149 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | RPP14 | 0.10 | 0.06 | lasso | 8 | 0.08 | 1.2e-03 | 7.66 | 7.8 | 6.2e-15 | 0.11 | 0.03 | 0.22 | FALSE |
150 | The Cancer Genome Atlas | Thyroid Carcinoma | ABHD6 | 0.15 | 0.17 | lasso | 4 | 0.16 | 1.4e-15 | 6.15 | -6.4 | 1.9e-10 | -0.09 | 1.00 | 0.00 | FALSE |
151 | The Cancer Genome Atlas | Thyroid Carcinoma | CCDC66 | 0.14 | 0.05 | blup | 56 | 0.08 | 2.3e-08 | 15.50 | -11.2 | 6.5e-29 | -0.05 | 0.90 | 0.02 | FALSE |
152 | The Cancer Genome Atlas | Thyroid Carcinoma | PXK | 0.12 | 0.10 | enet | 14 | 0.10 | 3.5e-10 | -9.60 | -9.1 | 1.0e-19 | -0.06 | 1.00 | 0.00 | FALSE |
153 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | ABHD6 | 0.18 | 0.13 | lasso | 3 | 0.13 | 1.8e-04 | 6.11 | -6.1 | 9.9e-10 | -0.09 | 0.12 | 0.07 | FALSE |
154 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | PDHB | 0.13 | 0.10 | blup | 40 | 0.13 | 2.0e-04 | 11.90 | -13.8 | 3.3e-43 | 0.09 | 0.11 | 0.14 | FALSE |