Best TWAS P=4.01e-253 · Best GWAS P=9.35e-177 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ADAMTS13 | 0.12 | 0.07 | enet | 21 | 0.08 | 4.3e-10 | 9.51 | 9.0 | 2.9e-19 | -0.12 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | BRD3 | 0.18 | 0.16 | lasso | 5 | 0.16 | 3.6e-19 | -5.30 | 5.7 | 1.4e-08 | 0.00 | 0.99 | 0.01 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | SURF1 | 0.52 | 0.47 | enet | 50 | 0.61 | 5.6e-95 | -10.04 | 11.3 | 2.3e-29 | -0.22 | 1.00 | 0.00 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | SURF2 | 0.05 | 0.04 | lasso | 1 | 0.03 | 1.5e-04 | 9.89 | -9.9 | 4.8e-23 | 0.14 | 0.81 | 0.01 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | SURF4 | 0.06 | 0.00 | blup | 589 | 0.01 | 6.4e-03 | -4.24 | -5.1 | 2.9e-07 | 0.09 | 0.05 | 0.03 | FALSE |
6 | GTEx | Adipose Subcutaneous | SURF1 | 0.41 | 0.31 | enet | 30 | 0.37 | 5.7e-32 | -10.04 | 9.6 | 5.7e-22 | -0.20 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | SURF6 | 0.17 | 0.18 | lasso | 1 | 0.17 | 6.6e-14 | -10.38 | -10.4 | 3.2e-25 | 0.18 | 1.00 | 0.00 | FALSE |
8 | GTEx | Adipose Subcutaneous | ADAMTS13 | 0.11 | 0.07 | lasso | 2 | 0.04 | 2.1e-04 | -10.35 | 10.2 | 1.5e-24 | -0.17 | 0.92 | 0.01 | FALSE |
9 | GTEx | Adipose Subcutaneous | BRD3 | 0.24 | 0.06 | enet | 51 | 0.09 | 1.7e-07 | -5.82 | 5.9 | 4.5e-09 | 0.03 | 0.58 | 0.33 | FALSE |
10 | GTEx | Adipose Visceral Omentum | SURF1 | 0.42 | 0.27 | lasso | 13 | 0.26 | 1.0e-13 | -9.16 | 9.8 | 8.8e-23 | -0.23 | 1.00 | 0.00 | FALSE |
11 | GTEx | Adipose Visceral Omentum | ADAMTS13 | 0.22 | 0.03 | lasso | 4 | 0.05 | 9.4e-04 | 5.22 | 5.5 | 3.1e-08 | -0.05 | 0.13 | 0.04 | FALSE |
12 | GTEx | Adipose Visceral Omentum | BRD3 | 0.21 | 0.01 | lasso | 5 | 0.00 | 1.8e-01 | -6.63 | 6.5 | 5.9e-11 | 0.00 | 0.07 | 0.33 | FALSE |
13 | GTEx | Adrenal Gland | SURF1 | 0.32 | 0.11 | lasso | 8 | 0.06 | 3.0e-03 | 10.13 | 9.2 | 5.6e-20 | -0.19 | 0.09 | 0.42 | FALSE |
14 | GTEx | Artery Aorta | SURF1 | 0.32 | 0.04 | enet | 30 | 0.12 | 5.6e-07 | 2.38 | 10.6 | 1.9e-26 | -0.18 | 0.93 | 0.01 | FALSE |
15 | GTEx | Artery Aorta | BRD3 | 0.34 | 0.03 | lasso | 9 | 0.09 | 7.9e-06 | -5.66 | 7.2 | 8.1e-13 | -0.03 | 0.11 | 0.80 | FALSE |
16 | GTEx | Artery Coronary | SURF1 | 0.39 | 0.01 | lasso | 5 | 0.06 | 3.2e-03 | 2.38 | 7.2 | 4.6e-13 | -0.22 | 0.22 | 0.12 | FALSE |
17 | GTEx | Artery Tibial | SURF1 | 0.35 | 0.08 | lasso | 11 | 0.10 | 1.8e-08 | 7.49 | 8.4 | 3.9e-17 | -0.15 | 0.96 | 0.01 | FALSE |
18 | GTEx | Artery Tibial | SURF6 | 0.15 | 0.10 | lasso | 5 | 0.14 | 3.2e-11 | -10.03 | -11.1 | 2.1e-28 | 0.15 | 1.00 | 0.00 | FALSE |
19 | GTEx | Artery Tibial | CACFD1 | 0.10 | 0.03 | lasso | 4 | 0.03 | 1.7e-03 | 6.28 | -16.0 | 2.5e-57 | 0.41 | 0.13 | 0.36 | FALSE |
20 | GTEx | Artery Tibial | BRD3 | 0.17 | 0.03 | enet | 14 | 0.09 | 1.5e-07 | 3.50 | 6.6 | 4.0e-11 | -0.02 | 0.60 | 0.33 | FALSE |
21 | GTEx | Brain Caudate basal ganglia | SURF1 | 0.55 | 0.24 | lasso | 20 | 0.23 | 3.1e-07 | 7.49 | 14.2 | 1.1e-45 | -0.29 | 0.38 | 0.32 | FALSE |
22 | GTEx | Brain Cerebellar Hemisphere | SURF1 | 0.58 | 0.28 | enet | 23 | 0.32 | 4.3e-09 | 9.89 | 11.5 | 7.8e-31 | -0.22 | 0.90 | 0.03 | FALSE |
23 | GTEx | Brain Cerebellum | SURF1 | 0.60 | 0.24 | enet | 38 | 0.44 | 2.7e-14 | -10.13 | 13.2 | 4.7e-40 | -0.26 | 0.99 | 0.00 | FALSE |
24 | GTEx | Brain Cortex | SURF1 | 0.61 | 0.20 | lasso | 11 | 0.33 | 5.9e-10 | 7.49 | 15.9 | 1.4e-56 | -0.35 | 0.82 | 0.03 | FALSE |
25 | GTEx | Brain Cortex | SURF6 | 0.35 | 0.13 | lasso | 7 | 0.08 | 2.7e-03 | 2.88 | -6.0 | 1.9e-09 | 0.02 | 0.17 | 0.04 | FALSE |
26 | GTEx | Brain Cortex | ADAMTS13 | 0.25 | 0.15 | enet | 7 | 0.10 | 8.2e-04 | -10.29 | 10.2 | 1.5e-24 | -0.16 | 0.31 | 0.06 | FALSE |
27 | GTEx | Brain Frontal Cortex BA9 | SURF1 | 0.70 | 0.26 | lasso | 16 | 0.44 | 4.3e-13 | 7.49 | 14.2 | 1.6e-45 | -0.27 | 0.93 | 0.02 | FALSE |
28 | GTEx | Brain Frontal Cortex BA9 | REXO4 | 0.36 | -0.01 | enet | 2 | 0.05 | 1.7e-02 | 10.34 | -10.0 | 1.1e-23 | 0.15 | 0.09 | 0.06 | FALSE |
29 | GTEx | Brain Hippocampus | SURF1 | 0.62 | 0.13 | lasso | 16 | 0.21 | 1.4e-05 | 7.49 | 10.5 | 1.2e-25 | -0.43 | 0.06 | 0.68 | FALSE |
30 | GTEx | Brain Nucleus accumbens basal ganglia | SURF1 | 0.58 | 0.20 | lasso | 12 | 0.22 | 1.2e-06 | 7.49 | 9.7 | 2.0e-22 | -0.26 | 0.48 | 0.10 | FALSE |
31 | GTEx | Brain Putamen basal ganglia | SURF1 | 0.47 | 0.28 | lasso | 7 | 0.20 | 2.1e-05 | 7.49 | 11.7 | 9.2e-32 | -0.23 | 0.28 | 0.06 | FALSE |
32 | GTEx | Breast Mammary Tissue | SURF1 | 0.33 | 0.25 | lasso | 8 | 0.26 | 2.2e-13 | -10.03 | 9.8 | 1.5e-22 | -0.17 | 1.00 | 0.00 | FALSE |
33 | GTEx | Breast Mammary Tissue | SURF6 | 0.13 | 0.12 | enet | 10 | 0.15 | 3.9e-08 | -10.45 | -7.2 | 8.2e-13 | 0.15 | 0.73 | 0.02 | TRUE |
34 | GTEx | Breast Mammary Tissue | RALGDS | 0.15 | 0.00 | lasso | 5 | 0.00 | 5.3e-01 | 6.28 | 9.3 | 2.1e-20 | -0.12 | 0.09 | 0.04 | FALSE |
35 | GTEx | Breast Mammary Tissue | VAV2 | 0.38 | 0.11 | lasso | 10 | 0.18 | 1.2e-09 | 0.73 | -5.9 | 3.3e-09 | 0.21 | 0.89 | 0.01 | FALSE |
36 | GTEx | Breast Mammary Tissue (Male) | SURF1 | 0.27 | 0.01 | lasso | 6 | 0.01 | 2.3e-01 | -10.03 | 13.3 | 1.3e-40 | -0.20 | 0.07 | 0.06 | FALSE |
37 | GTEx | Breast Mammary Tissue (Female) | SURF1 | 0.49 | 0.28 | lasso | 8 | 0.16 | 1.4e-05 | -9.16 | 9.7 | 3.2e-22 | -0.19 | 0.84 | 0.01 | FALSE |
38 | GTEx | Breast Mammary Tissue (Female) | RALGDS | 0.35 | -0.01 | enet | 19 | 0.03 | 5.4e-02 | 6.53 | 7.2 | 5.1e-13 | -0.12 | 0.08 | 0.05 | FALSE |
39 | GTEx | Cells EBV-transformed lymphocytes | SURF1 | 0.49 | 0.12 | lasso | 11 | 0.21 | 2.5e-07 | 7.49 | 11.4 | 4.0e-30 | -0.27 | 0.81 | 0.03 | FALSE |
40 | GTEx | Cells EBV-transformed lymphocytes | CEL | 0.45 | -0.01 | lasso | 9 | -0.01 | 7.2e-01 | 6.57 | 5.8 | 5.0e-09 | 0.01 | 0.17 | 0.04 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | SURF1 | 0.42 | 0.25 | enet | 37 | 0.35 | 1.4e-27 | 7.49 | 8.1 | 6.1e-16 | -0.22 | 1.00 | 0.00 | TRUE |
42 | GTEx | Cells Transformed fibroblasts | SURF6 | 0.17 | 0.11 | lasso | 3 | 0.10 | 5.0e-08 | 10.28 | -8.1 | 6.8e-16 | 0.09 | 0.98 | 0.00 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | REXO4 | 0.31 | 0.13 | enet | 26 | 0.20 | 3.3e-15 | -10.26 | 12.0 | 3.6e-33 | -0.11 | 1.00 | 0.00 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | ADAMTS13 | 0.14 | 0.09 | lasso | 5 | 0.09 | 1.4e-07 | -9.16 | 6.2 | 6.9e-10 | -0.13 | 1.00 | 0.00 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | BRD3 | 0.29 | 0.23 | lasso | 4 | 0.27 | 3.7e-20 | -5.66 | 6.6 | 3.2e-11 | -0.01 | 0.12 | 0.88 | FALSE |
46 | GTEx | Colon Sigmoid | SURF1 | 0.51 | 0.19 | enet | 34 | 0.08 | 6.3e-04 | 7.49 | 5.8 | 6.5e-09 | -0.21 | 0.41 | 0.10 | FALSE |
47 | GTEx | Colon Sigmoid | SURF6 | 0.25 | 0.15 | enet | 4 | 0.06 | 4.7e-03 | -10.45 | -10.5 | 6.4e-26 | 0.19 | 0.34 | 0.04 | FALSE |
48 | GTEx | Colon Transverse | SURF1 | 0.41 | 0.11 | enet | 25 | 0.29 | 3.8e-14 | -10.13 | 13.4 | 4.5e-41 | -0.32 | 0.99 | 0.01 | FALSE |
49 | GTEx | Colon Transverse | SURF6 | 0.21 | 0.15 | enet | 10 | 0.10 | 2.1e-05 | -10.29 | -11.4 | 5.4e-30 | 0.18 | 0.97 | 0.00 | FALSE |
50 | GTEx | Esophagus Gastroesophageal Junction | SURF1 | 0.35 | 0.10 | enet | 21 | 0.11 | 6.4e-05 | 7.49 | 13.9 | 5.6e-44 | -0.35 | 0.13 | 0.48 | FALSE |
51 | GTEx | Esophagus Gastroesophageal Junction | SURF6 | 0.30 | 0.20 | lasso | 9 | 0.21 | 3.9e-08 | -10.44 | -12.3 | 1.6e-34 | 0.20 | 0.95 | 0.00 | FALSE |
52 | GTEx | Esophagus Mucosa | SURF1 | 0.42 | 0.18 | lasso | 5 | 0.29 | 8.6e-20 | 7.49 | 10.5 | 1.1e-25 | -0.23 | 1.00 | 0.00 | FALSE |
53 | GTEx | Esophagus Mucosa | SURF6 | 0.19 | 0.15 | lasso | 2 | 0.14 | 9.8e-10 | -10.38 | -10.1 | 5.9e-24 | 0.18 | 1.00 | 0.00 | FALSE |
54 | GTEx | Esophagus Mucosa | CACFD1 | 0.23 | 0.17 | enet | 21 | 0.19 | 8.1e-13 | 6.28 | 8.0 | 9.0e-16 | -0.15 | 1.00 | 0.00 | FALSE |
55 | GTEx | Esophagus Mucosa | BRD3 | 0.19 | 0.06 | lasso | 5 | 0.11 | 1.5e-07 | -5.20 | 6.8 | 9.2e-12 | 0.01 | 0.38 | 0.58 | FALSE |
56 | GTEx | Esophagus Muscularis | SURF1 | 0.42 | 0.07 | enet | 15 | 0.14 | 1.0e-08 | 7.49 | 10.1 | 9.0e-24 | -0.23 | 0.84 | 0.05 | FALSE |
57 | GTEx | Esophagus Muscularis | SURF6 | 0.23 | 0.26 | enet | 6 | 0.23 | 3.2e-14 | -10.44 | -10.5 | 7.4e-26 | 0.19 | 1.00 | 0.00 | FALSE |
58 | GTEx | Esophagus Muscularis | REXO4 | 0.16 | 0.02 | lasso | 1 | 0.05 | 7.0e-04 | 10.34 | -10.3 | 4.7e-25 | 0.14 | 0.59 | 0.02 | FALSE |
59 | GTEx | Esophagus Muscularis | BRD3 | 0.18 | 0.03 | enet | 14 | 0.09 | 5.8e-06 | -5.82 | 6.7 | 1.9e-11 | 0.00 | 0.28 | 0.68 | FALSE |
60 | GTEx | Heart Atrial Appendage | SURF1 | 0.40 | 0.07 | enet | 43 | 0.19 | 9.3e-09 | -10.03 | 16.0 | 8.6e-58 | -0.40 | 0.56 | 0.37 | TRUE |
61 | GTEx | Heart Left Ventricle | SURF1 | 0.28 | 0.20 | lasso | 5 | 0.21 | 2.5e-11 | -10.12 | 9.8 | 6.6e-23 | -0.18 | 1.00 | 0.00 | FALSE |
62 | GTEx | Liver | REXO4 | 0.37 | 0.11 | lasso | 4 | 0.10 | 9.1e-04 | 4.98 | 7.3 | 2.2e-13 | -0.14 | 0.18 | 0.04 | FALSE |
63 | GTEx | Lung | SURF1 | 0.31 | 0.14 | enet | 33 | 0.15 | 7.1e-12 | -9.16 | 7.2 | 4.3e-13 | -0.16 | 1.00 | 0.00 | FALSE |
64 | GTEx | Lung | SURF6 | 0.18 | 0.14 | enet | 8 | 0.13 | 3.6e-10 | -10.29 | -10.7 | 7.8e-27 | 0.18 | 1.00 | 0.00 | FALSE |
65 | GTEx | Lung | ADAMTS13 | 0.09 | 0.06 | lasso | 4 | 0.03 | 1.4e-03 | 5.11 | 5.9 | 2.9e-09 | -0.13 | 0.51 | 0.02 | FALSE |
66 | GTEx | Muscle Skeletal | SURF1 | 0.29 | 0.03 | enet | 35 | 0.17 | 1.5e-16 | 7.49 | 11.5 | 1.3e-30 | -0.26 | 0.98 | 0.02 | FALSE |
67 | GTEx | Nerve Tibial | SURF1 | 0.30 | 0.15 | enet | 32 | 0.23 | 1.9e-16 | 7.49 | 12.3 | 6.9e-35 | -0.30 | 1.00 | 0.00 | FALSE |
68 | GTEx | Nerve Tibial | SURF6 | 0.19 | 0.11 | lasso | 4 | 0.12 | 1.3e-08 | -10.38 | -8.9 | 6.4e-19 | 0.17 | 1.00 | 0.00 | FALSE |
69 | GTEx | Nerve Tibial | ADAMTS13 | 0.24 | 0.10 | lasso | 5 | 0.19 | 1.5e-13 | 2.54 | 7.6 | 2.2e-14 | -0.08 | 1.00 | 0.00 | FALSE |
70 | GTEx | Nerve Tibial | BRD3 | 0.23 | 0.10 | lasso | 5 | 0.16 | 2.7e-11 | -5.57 | 7.0 | 3.1e-12 | 0.02 | 0.10 | 0.90 | FALSE |
71 | GTEx | Nerve Tibial | ADAMTSL2 | 0.27 | 0.01 | lasso | 9 | 0.01 | 3.2e-02 | -3.18 | 7.1 | 1.3e-12 | -0.03 | 0.21 | 0.07 | TRUE |
72 | GTEx | Nerve Tibial | DBH-AS1 | 0.39 | 0.04 | lasso | 11 | 0.18 | 1.8e-12 | -0.20 | 6.2 | 4.0e-10 | -0.07 | 0.99 | 0.00 | FALSE |
73 | GTEx | Pancreas | SURF1 | 0.33 | 0.04 | lasso | 6 | 0.03 | 2.0e-02 | -9.16 | 9.3 | 1.7e-20 | -0.18 | 0.13 | 0.05 | FALSE |
74 | GTEx | Pancreas | DBH-AS1 | 0.28 | 0.06 | enet | 22 | 0.07 | 8.3e-04 | -2.19 | 5.8 | 6.3e-09 | -0.13 | 0.30 | 0.04 | FALSE |
75 | GTEx | Pituitary | SURF1 | 0.54 | 0.07 | lasso | 11 | 0.12 | 8.1e-04 | 1.76 | 8.0 | 1.4e-15 | -0.16 | 0.11 | 0.08 | FALSE |
76 | GTEx | Prostate | SURF1 | 0.49 | 0.20 | lasso | 5 | 0.24 | 7.4e-07 | -10.18 | -9.2 | 3.1e-20 | 0.13 | 0.34 | 0.04 | FALSE |
77 | GTEx | Skin Not Sun Exposed Suprapubic | SURF1 | 0.29 | 0.12 | enet | 15 | 0.20 | 1.8e-11 | -10.38 | 9.2 | 3.6e-20 | -0.23 | 1.00 | 0.00 | FALSE |
78 | GTEx | Skin Not Sun Exposed Suprapubic | SURF6 | 0.24 | 0.30 | lasso | 1 | 0.28 | 1.1e-15 | -10.38 | -10.4 | 3.2e-25 | 0.18 | 1.00 | 0.00 | FALSE |
79 | GTEx | Skin Sun Exposed Lower leg | SURF1 | 0.45 | 0.25 | lasso | 9 | 0.42 | 5.1e-38 | 10.13 | 13.5 | 1.9e-41 | -0.29 | 1.00 | 0.00 | FALSE |
80 | GTEx | Skin Sun Exposed Lower leg | SURF6 | 0.26 | 0.24 | lasso | 5 | 0.24 | 6.6e-20 | -10.03 | -10.3 | 5.8e-25 | 0.18 | 1.00 | 0.00 | FALSE |
81 | GTEx | Skin Sun Exposed Lower leg | BRD3 | 0.18 | 0.12 | lasso | 7 | 0.11 | 1.2e-09 | -5.30 | 6.5 | 7.6e-11 | 0.00 | 0.47 | 0.53 | FALSE |
82 | GTEx | Skin Sun Exposed Lower leg | LINC00094 | 0.14 | 0.01 | enet | 40 | 0.03 | 1.7e-03 | 3.42 | 7.3 | 2.7e-13 | -0.02 | 0.37 | 0.39 | TRUE |
83 | GTEx | Spleen | SARDH | 0.40 | -0.01 | enet | 49 | 0.10 | 1.3e-03 | -0.19 | -7.6 | 2.5e-14 | 0.16 | 0.08 | 0.06 | TRUE |
84 | GTEx | Spleen | SURF6 | 0.46 | 0.45 | lasso | 1 | 0.42 | 6.8e-12 | -10.45 | -10.4 | 1.5e-25 | 0.19 | 0.99 | 0.00 | FALSE |
85 | GTEx | Stomach | SURF1 | 0.23 | 0.01 | enet | 31 | 0.06 | 5.8e-04 | 2.38 | 10.0 | 1.7e-23 | -0.35 | 0.13 | 0.12 | FALSE |
86 | GTEx | Testis | SURF1 | 0.36 | 0.03 | lasso | 5 | 0.11 | 1.5e-05 | -2.70 | 5.3 | 9.3e-08 | -0.24 | 0.29 | 0.29 | FALSE |
87 | GTEx | Testis | SURF6 | 0.38 | 0.32 | enet | 18 | 0.34 | 9.1e-16 | -10.38 | -8.1 | 8.2e-16 | 0.17 | 1.00 | 0.00 | FALSE |
88 | GTEx | Testis | CACFD1 | 0.26 | 0.05 | enet | 25 | 0.10 | 5.3e-05 | -20.18 | -14.5 | 7.6e-48 | 0.34 | 0.30 | 0.15 | FALSE |
89 | GTEx | Testis | BRD3 | 0.20 | 0.18 | lasso | 3 | 0.18 | 3.2e-08 | -5.65 | 5.7 | 1.5e-08 | 0.02 | 0.90 | 0.09 | FALSE |
90 | GTEx | Thyroid | SURF1 | 0.27 | 0.06 | enet | 23 | 0.21 | 1.0e-15 | -9.16 | 14.1 | 3.4e-45 | -0.27 | 1.00 | 0.00 | FALSE |
91 | GTEx | Uterus | SURF1 | 0.40 | 0.05 | enet | 18 | 0.08 | 9.2e-03 | -17.21 | 15.5 | 3.1e-54 | -0.50 | 0.03 | 0.55 | FALSE |
92 | GTEx | Whole Blood | SURF1 | 0.10 | 0.00 | lasso | 5 | 0.00 | 2.5e-01 | -2.91 | 5.5 | 4.8e-08 | -0.24 | 0.02 | 0.64 | FALSE |
93 | GTEx | Whole Blood | SURF6 | 0.24 | 0.25 | enet | 8 | 0.24 | 2.2e-22 | -10.38 | -10.0 | 1.5e-23 | 0.18 | 1.00 | 0.00 | FALSE |
94 | GTEx | Whole Blood | MED22 | 0.17 | 0.15 | enet | 15 | 0.14 | 2.0e-12 | -10.45 | -11.5 | 7.8e-31 | 0.19 | 1.00 | 0.00 | FALSE |
95 | METSIM | Adipose | BRD3 | 0.25 | 0.13 | bslmm | 590 | 0.20 | 1.7e-29 | -3.66 | 5.8 | 5.5e-09 | 0.03 | 1.00 | 0.00 | FALSE |
96 | METSIM | Adipose | C9orf96 | 0.07 | 0.01 | blup | 605 | 0.03 | 7.8e-05 | 2.81 | -6.3 | 2.5e-10 | 0.29 | 0.05 | 0.60 | FALSE |
97 | METSIM | Adipose | GBGT1 | 0.04 | 0.00 | blup | 570 | 0.01 | 4.8e-02 | -3.54 | 8.7 | 4.0e-18 | -0.20 | 0.14 | 0.11 | FALSE |
98 | METSIM | Adipose | MED22 | 0.05 | 0.05 | lasso | 2 | 0.03 | 7.0e-06 | 10.67 | -10.7 | 9.2e-27 | 0.11 | 1.00 | 0.00 | FALSE |
99 | METSIM | Adipose | SURF1 | 0.19 | 0.12 | enet | 40 | 0.20 | 2.1e-28 | -9.16 | 10.9 | 8.5e-28 | -0.21 | 1.00 | 0.00 | FALSE |
100 | METSIM | Adipose | SURF6 | 0.08 | 0.07 | enet | 21 | 0.06 | 1.4e-09 | -10.44 | -7.5 | 4.9e-14 | 0.15 | 1.00 | 0.00 | FALSE |
101 | NTR | Blood | BRD3 | 0.04 | 0.04 | bslmm | 555 | 0.04 | 5.7e-12 | -5.59 | 5.3 | 9.0e-08 | 0.01 | 0.92 | 0.08 | FALSE |
102 | NTR | Blood | SURF1 | 0.06 | 0.04 | lasso | 3 | 0.04 | 4.3e-13 | 7.49 | 7.4 | 1.9e-13 | -0.22 | 1.00 | 0.00 | FALSE |
103 | NTR | Blood | SURF6 | 0.05 | 0.02 | lasso | 3 | 0.02 | 6.1e-07 | -10.44 | -10.5 | 1.5e-25 | 0.19 | 1.00 | 0.00 | FALSE |
104 | YFS | Blood | GFI1B | 0.02 | 0.03 | enet | 20 | 0.02 | 1.6e-08 | 8.59 | -9.3 | 1.8e-20 | 0.07 | 1.00 | 0.00 | TRUE |
105 | YFS | Blood | SURF1 | 0.19 | 0.15 | lasso | 11 | 0.22 | 4.9e-71 | 7.49 | 7.8 | 4.2e-15 | -0.25 | 1.00 | 0.00 | FALSE |
106 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ADAMTS13 | 0.06 | 0.04 | enet | 6 | 0.01 | 2.2e-02 | 10.34 | 6.8 | 1.3e-11 | -0.09 | 0.08 | 0.03 | FALSE |
107 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | SURF1 | 0.24 | 0.09 | enet | 15 | 0.16 | 3.2e-13 | -10.04 | 12.0 | 5.5e-33 | -0.30 | 0.98 | 0.02 | FALSE |
108 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | SURF4 | 0.04 | 0.04 | lasso | 3 | 0.03 | 1.1e-03 | 10.28 | 8.1 | 7.0e-16 | -0.12 | 0.07 | 0.07 | FALSE |
109 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ABO | 0.07 | 0.08 | lasso | 3 | 0.08 | 5.0e-16 | -15.98 | -16.0 | 1.9e-57 | 0.63 | 1.00 | 0.00 | FALSE |
110 | The Cancer Genome Atlas | Breast Invasive Carcinoma | BRD3 | 0.07 | 0.11 | lasso | 3 | 0.12 | 4.2e-23 | -5.85 | 6.4 | 1.3e-10 | 0.02 | 0.13 | 0.87 | FALSE |
111 | The Cancer Genome Atlas | Breast Invasive Carcinoma | OBP2B | 0.03 | 0.02 | blup | 33 | 0.02 | 5.5e-05 | 16.50 | -22.8 | 3.1e-115 | 0.21 | 0.01 | 0.98 | FALSE |
112 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SURF1 | 0.24 | 0.14 | enet | 12 | 0.21 | 2.6e-41 | -10.04 | 11.0 | 6.5e-28 | -0.24 | 1.00 | 0.00 | FALSE |
113 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SURF6 | 0.03 | 0.04 | lasso | 4 | 0.04 | 1.3e-09 | -10.03 | -10.8 | 2.8e-27 | 0.17 | 1.00 | 0.00 | FALSE |
114 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | SURF1 | 0.17 | 0.06 | enet | 6 | 0.07 | 1.8e-04 | -10.04 | 9.6 | 1.3e-21 | -0.13 | 0.43 | 0.03 | FALSE |
115 | The Cancer Genome Atlas | Colon Adenocarcinoma | BRD3 | 0.15 | 0.11 | lasso | 4 | 0.12 | 3.7e-07 | -6.63 | 6.7 | 1.6e-11 | -0.01 | 0.00 | 1.00 | FALSE |
116 | The Cancer Genome Atlas | Colon Adenocarcinoma | SURF1 | 0.25 | 0.15 | enet | 10 | 0.15 | 6.5e-09 | -10.03 | 11.1 | 7.7e-29 | -0.19 | 1.00 | 0.00 | FALSE |
117 | The Cancer Genome Atlas | Colon Adenocarcinoma | SURF6 | 0.04 | 0.05 | enet | 4 | 0.04 | 1.5e-03 | -10.38 | -7.7 | 1.7e-14 | 0.08 | 0.08 | 0.06 | FALSE |
118 | The Cancer Genome Atlas | Esophageal Carcinoma | ABO | 0.27 | 0.13 | lasso | 2 | 0.11 | 1.8e-04 | -16.02 | -15.9 | 7.6e-57 | 0.63 | 0.32 | 0.13 | FALSE |
119 | The Cancer Genome Atlas | Esophageal Carcinoma | SURF1 | 0.34 | 0.14 | blup | 30 | 0.13 | 6.7e-05 | -10.03 | 12.3 | 8.5e-35 | -0.34 | 0.14 | 0.69 | FALSE |
120 | The Cancer Genome Atlas | Glioblastoma Multiforme | SURF1 | 0.58 | 0.03 | enet | 13 | 0.23 | 1.1e-07 | -10.03 | 9.9 | 4.9e-23 | -0.31 | 0.02 | 0.38 | FALSE |
121 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ADAMTS13 | 0.08 | 0.03 | enet | 13 | 0.02 | 1.4e-03 | 10.34 | 8.3 | 9.0e-17 | -0.24 | 0.19 | 0.06 | FALSE |
122 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | BRD3 | 0.10 | 0.03 | enet | 11 | 0.06 | 9.2e-08 | -5.57 | 5.4 | 7.7e-08 | -0.01 | 0.01 | 0.99 | FALSE |
123 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C9orf7 | 0.09 | 0.04 | enet | 8 | 0.03 | 4.9e-04 | 10.34 | 10.5 | 1.2e-25 | -0.22 | 0.91 | 0.05 | FALSE |
124 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SURF1 | 0.22 | 0.10 | enet | 12 | 0.18 | 5.1e-20 | -10.04 | 10.4 | 1.8e-25 | -0.23 | 1.00 | 0.00 | FALSE |
125 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SURF6 | 0.02 | 0.01 | enet | 7 | 0.01 | 1.6e-02 | -10.03 | -14.6 | 2.0e-48 | 0.31 | 0.01 | 0.54 | FALSE |
126 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ABO | 0.20 | 0.19 | blup | 43 | 0.33 | 3.0e-38 | 6.15 | -8.0 | 1.9e-15 | 0.37 | 1.00 | 0.00 | TRUE |
127 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | BRD3 | 0.09 | 0.10 | lasso | 4 | 0.08 | 9.5e-10 | -5.65 | 6.4 | 1.6e-10 | 0.01 | 0.26 | 0.74 | FALSE |
128 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | REXO4 | 0.04 | 0.01 | lasso | 4 | 0.02 | 1.4e-03 | 2.51 | 13.1 | 1.8e-39 | -0.27 | 0.01 | 0.84 | FALSE |
129 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SLC2A6 | 0.03 | 0.01 | blup | 14 | 0.02 | 5.2e-03 | 2.21 | -7.7 | 1.1e-14 | 0.24 | 0.01 | 0.03 | TRUE |
130 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SURF1 | 0.43 | 0.33 | enet | 12 | 0.42 | 1.6e-50 | -10.03 | 12.1 | 1.1e-33 | -0.25 | 1.00 | 0.00 | FALSE |
131 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SURF6 | 0.02 | 0.01 | blup | 24 | 0.02 | 8.5e-04 | -10.38 | -10.7 | 1.6e-26 | 0.14 | 0.06 | 0.03 | FALSE |
132 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ABO | 0.31 | 0.38 | lasso | 5 | 0.42 | 3.1e-26 | -16.73 | -15.9 | 4.3e-57 | 0.54 | 1.00 | 0.00 | FALSE |
133 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SURF1 | 0.30 | 0.16 | enet | 11 | 0.22 | 1.1e-12 | -10.03 | 12.5 | 4.4e-36 | -0.23 | 1.00 | 0.00 | FALSE |
134 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SURF6 | 0.09 | 0.09 | lasso | 2 | 0.09 | 1.1e-05 | -10.38 | -11.2 | 4.4e-29 | 0.18 | 0.78 | 0.04 | FALSE |
135 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ABO | 0.26 | 0.23 | enet | 10 | 0.26 | 6.0e-29 | -15.98 | -11.8 | 3.0e-32 | 0.66 | 1.00 | 0.00 | FALSE |
136 | The Cancer Genome Atlas | Brain Lower Grade Glioma | BRD3 | 0.06 | 0.01 | blup | 59 | 0.03 | 1.6e-04 | -5.57 | 6.9 | 5.7e-12 | 0.00 | 0.01 | 0.82 | FALSE |
137 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C9orf96 | 0.04 | 0.03 | lasso | 3 | 0.04 | 1.5e-05 | 2.81 | -11.0 | 4.8e-28 | 0.25 | 0.04 | 0.69 | FALSE |
138 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SURF1 | 0.52 | 0.23 | enet | 14 | 0.42 | 5.1e-52 | -10.04 | 10.9 | 1.1e-27 | -0.25 | 1.00 | 0.00 | FALSE |
139 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SURF6 | 0.05 | 0.07 | lasso | 3 | 0.06 | 3.7e-07 | -10.38 | -10.3 | 4.8e-25 | 0.18 | 0.99 | 0.01 | TRUE |
140 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | ABO | 0.23 | 0.23 | lasso | 2 | 0.24 | 2.2e-11 | -16.73 | -16.8 | 5.0e-63 | 0.53 | 1.00 | 0.00 | FALSE |
141 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | SURF1 | 0.28 | 0.07 | enet | 8 | 0.11 | 7.4e-06 | -10.03 | 8.1 | 5.3e-16 | -0.27 | 0.03 | 0.05 | FALSE |
142 | The Cancer Genome Atlas | Lung Adenocarcinoma | ABO | 0.21 | 0.25 | lasso | 5 | 0.25 | 2.1e-29 | -15.98 | -15.1 | 1.6e-51 | 0.59 | 1.00 | 0.00 | FALSE |
143 | The Cancer Genome Atlas | Lung Adenocarcinoma | BRD3 | 0.04 | 0.01 | enet | 14 | 0.03 | 3.1e-04 | -5.57 | 5.6 | 1.7e-08 | 0.03 | 0.02 | 0.74 | FALSE |
144 | The Cancer Genome Atlas | Lung Adenocarcinoma | GBGT1 | 0.05 | 0.01 | blup | 39 | 0.02 | 3.8e-03 | 10.97 | -5.3 | 1.4e-07 | 0.09 | 0.01 | 0.03 | TRUE |
145 | The Cancer Genome Atlas | Lung Adenocarcinoma | SURF1 | 0.27 | 0.10 | lasso | 2 | 0.14 | 1.5e-15 | -10.03 | 11.7 | 1.8e-31 | -0.24 | 1.00 | 0.00 | FALSE |
146 | The Cancer Genome Atlas | Lung Adenocarcinoma | SURF6 | 0.02 | 0.00 | blup | 22 | 0.01 | 1.7e-02 | -10.04 | -14.0 | 1.1e-44 | 0.26 | 0.05 | 0.03 | FALSE |
147 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | ABO | 0.08 | 0.06 | blup | 43 | 0.09 | 1.7e-10 | -15.98 | -8.2 | 2.8e-16 | 0.40 | 1.00 | 0.00 | FALSE |
148 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SURF1 | 0.28 | 0.12 | enet | 19 | 0.16 | 2.4e-18 | 10.11 | 11.1 | 1.1e-28 | -0.25 | 1.00 | 0.00 | FALSE |
149 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | ABO | 0.28 | 0.22 | lasso | 8 | 0.22 | 1.2e-14 | -15.98 | -15.9 | 3.4e-57 | 0.63 | 1.00 | 0.00 | FALSE |
150 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SURF1 | 0.20 | 0.08 | enet | 9 | 0.13 | 6.3e-09 | -10.18 | 12.8 | 2.6e-37 | -0.26 | 0.92 | 0.05 | FALSE |
151 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SURF6 | 0.03 | 0.02 | enet | 3 | 0.03 | 6.9e-03 | -10.04 | -10.3 | 5.6e-25 | 0.18 | 0.04 | 0.09 | FALSE |
152 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ABO | 0.23 | 0.21 | lasso | 5 | 0.20 | 6.7e-09 | -16.73 | -9.1 | 1.2e-19 | 0.49 | 0.60 | 0.40 | FALSE |
153 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ADAMTS13 | 0.12 | 0.14 | lasso | 2 | 0.14 | 2.4e-06 | 10.34 | 10.1 | 6.7e-24 | -0.14 | 0.26 | 0.08 | FALSE |
154 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | BRD3 | 0.14 | 0.02 | blup | 60 | 0.09 | 2.0e-04 | -5.09 | 6.5 | 7.8e-11 | 0.02 | 0.04 | 0.58 | FALSE |
155 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | SURF1 | 0.16 | 0.06 | blup | 31 | 0.06 | 1.4e-03 | 10.11 | 13.0 | 1.8e-38 | -0.26 | 0.05 | 0.57 | FALSE |
156 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | ABO | 0.23 | 0.23 | lasso | 3 | 0.23 | 2.0e-09 | -16.02 | -15.7 | 9.6e-56 | 0.61 | 0.99 | 0.00 | FALSE |
157 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | BRD3 | 0.09 | 0.03 | blup | 60 | 0.01 | 1.1e-01 | -5.70 | 6.5 | 1.1e-10 | 0.01 | 0.02 | 0.52 | FALSE |
158 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | SURF1 | 0.51 | 0.23 | enet | 8 | 0.20 | 1.8e-08 | -10.18 | 11.6 | 3.0e-31 | -0.22 | 0.99 | 0.00 | FALSE |
159 | The Cancer Genome Atlas | Prostate Adenocarcinoma | BRD3 | 0.09 | 0.07 | lasso | 3 | 0.07 | 1.3e-07 | -5.66 | 5.5 | 3.4e-08 | -0.01 | 0.02 | 0.98 | FALSE |
160 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SURF1 | 0.45 | 0.14 | enet | 10 | 0.26 | 1.5e-26 | 10.11 | 10.1 | 7.9e-24 | -0.21 | 1.00 | 0.00 | FALSE |
161 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SURF6 | 0.10 | 0.19 | lasso | 6 | 0.18 | 2.3e-18 | -10.38 | -10.6 | 1.8e-26 | 0.18 | 1.00 | 0.00 | FALSE |
162 | The Cancer Genome Atlas | Rectum Adenocarcinoma | ABO | 0.48 | 0.23 | enet | 10 | 0.27 | 4.7e-07 | -16.62 | -14.0 | 8.1e-45 | 0.65 | 0.09 | 0.60 | FALSE |
163 | The Cancer Genome Atlas | Rectum Adenocarcinoma | BRD3 | 0.32 | -0.01 | blup | 60 | 0.02 | 9.8e-02 | -6.63 | 5.7 | 1.5e-08 | 0.02 | 0.01 | 0.59 | FALSE |
164 | The Cancer Genome Atlas | Rectum Adenocarcinoma | SURF1 | 0.32 | 0.08 | enet | 8 | 0.07 | 1.1e-02 | -10.18 | 12.5 | 5.9e-36 | -0.20 | 0.02 | 0.13 | FALSE |
165 | The Cancer Genome Atlas | Soft Tissue Sarcoma | ABO | 0.32 | 0.18 | enet | 10 | 0.20 | 2.3e-12 | -15.98 | -5.8 | 7.2e-09 | 0.49 | 0.96 | 0.04 | FALSE |
166 | The Cancer Genome Atlas | Soft Tissue Sarcoma | SURF1 | 0.20 | 0.08 | enet | 12 | 0.14 | 9.7e-09 | -10.04 | 13.7 | 1.7e-42 | -0.30 | 0.36 | 0.54 | FALSE |
167 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | ABO | 0.38 | 0.11 | blup | 43 | 0.15 | 9.6e-05 | 25.15 | 6.5 | 6.3e-11 | 0.28 | 0.01 | 0.93 | TRUE |
168 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | SURF1 | 0.31 | 0.01 | blup | 30 | 0.06 | 1.0e-02 | -10.20 | 13.0 | 1.5e-38 | -0.38 | 0.01 | 0.69 | FALSE |
169 | The Cancer Genome Atlas | Stomach Adenocarcinoma | BRD3 | 0.07 | 0.04 | enet | 12 | 0.04 | 4.3e-04 | -5.65 | 6.3 | 3.5e-10 | 0.02 | 0.02 | 0.88 | FALSE |
170 | The Cancer Genome Atlas | Stomach Adenocarcinoma | SURF1 | 0.10 | 0.10 | enet | 8 | 0.09 | 5.7e-07 | 10.16 | 10.2 | 1.7e-24 | -0.22 | 0.94 | 0.01 | FALSE |
171 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ABO | 0.41 | 0.17 | enet | 12 | 0.25 | 3.0e-09 | 10.01 | -10.0 | 9.7e-24 | 0.37 | 0.74 | 0.15 | FALSE |
172 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | SURF1 | 0.15 | 0.07 | blup | 30 | 0.05 | 6.1e-03 | 10.16 | 11.7 | 9.3e-32 | -0.24 | 0.02 | 0.18 | FALSE |
173 | The Cancer Genome Atlas | Thyroid Carcinoma | ABO | 0.44 | 0.57 | enet | 18 | 0.60 | 1.9e-73 | -15.98 | -10.7 | 1.3e-26 | 0.51 | 1.00 | 0.00 | FALSE |
174 | The Cancer Genome Atlas | Thyroid Carcinoma | BRD3 | 0.12 | 0.18 | enet | 8 | 0.21 | 8.4e-20 | -5.85 | 6.6 | 3.7e-11 | 0.01 | 0.02 | 0.98 | FALSE |
175 | The Cancer Genome Atlas | Thyroid Carcinoma | SURF1 | 0.40 | 0.22 | enet | 11 | 0.34 | 3.7e-34 | -10.38 | 11.7 | 1.6e-31 | -0.26 | 1.00 | 0.00 | FALSE |
176 | The Cancer Genome Atlas | Thyroid Carcinoma | SURF6 | 0.06 | 0.04 | lasso | 2 | 0.02 | 2.4e-03 | 3.03 | -5.4 | 8.3e-08 | 0.01 | 0.14 | 0.08 | FALSE |
177 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | ABO | 0.23 | 0.07 | blup | 44 | 0.12 | 4.3e-04 | -16.73 | -34.0 | 4.0e-253 | 0.62 | 0.02 | 0.05 | TRUE |