Best TWAS P=5.08e-23 · Best GWAS P=5.08e-23 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CKMT1B | 0.03 | 0.05 | lasso | 1 | 0.04 | 1.7e-05 | -5.2 | 5.2 | 2.2e-07 | 0.05 | 0.22 | 0.78 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | EIF2AK4 | 0.32 | 0.15 | bslmm | 485 | 0.18 | 2.1e-21 | -5.3 | 5.9 | 4.4e-09 | -0.59 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | EXD1 | 0.04 | 0.04 | lasso | 3 | 0.04 | 8.1e-06 | -5.9 | 5.2 | 2.0e-07 | 0.02 | 0.28 | 0.70 | TRUE |
4 | CommonMind | Brain Pre-frontal Cortex | SNAP23 | 0.05 | 0.02 | lasso | 3 | 0.02 | 4.7e-03 | -6.2 | 6.2 | 7.6e-10 | -0.08 | 0.04 | 0.94 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | SRP14 | 0.18 | 0.04 | lasso | 7 | 0.07 | 5.0e-09 | -5.7 | 6.4 | 1.3e-10 | -0.49 | 0.59 | 0.39 | FALSE |
6 | CommonMind | Brain Pre-frontal Cortex | TTBK2 | 0.05 | 0.01 | blup | 341 | 0.03 | 7.2e-05 | -2.0 | 5.4 | 7.0e-08 | -0.10 | 0.58 | 0.08 | FALSE |
7 | CommonMind | Brain Pre-frontal Cortex | WDR76 | 0.05 | 0.04 | lasso | 4 | 0.05 | 4.9e-07 | -4.9 | -5.9 | 3.0e-09 | 0.03 | 0.31 | 0.69 | FALSE |
8 | GTEx | Adipose Subcutaneous | TP53BP1 | 0.02 | 0.01 | enet | 10 | 0.03 | 1.5e-03 | -5.4 | 6.7 | 2.2e-11 | 0.01 | 0.08 | 0.70 | TRUE |
9 | GTEx | Adipose Subcutaneous | RPAP1 | 0.18 | 0.20 | enet | 17 | 0.21 | 4.3e-17 | -4.9 | -5.8 | 5.9e-09 | 0.05 | 0.29 | 0.71 | FALSE |
10 | GTEx | Adipose Subcutaneous | EIF2AK4 | 0.38 | 0.08 | enet | 18 | 0.23 | 4.7e-19 | 6.2 | 6.7 | 1.7e-11 | -0.54 | 0.90 | 0.10 | FALSE |
11 | GTEx | Adipose Subcutaneous | SRP14-AS1 | 0.53 | 0.36 | lasso | 10 | 0.35 | 4.9e-30 | -5.3 | 5.3 | 1.2e-07 | -0.37 | 1.00 | 0.00 | FALSE |
12 | GTEx | Adipose Visceral Omentum | LTK | 0.15 | 0.10 | lasso | 3 | 0.08 | 4.6e-05 | 7.0 | 7.0 | 2.6e-12 | -0.08 | 0.00 | 0.99 | FALSE |
13 | GTEx | Adipose Visceral Omentum | EIF2AK4 | 0.23 | 0.08 | lasso | 7 | 0.15 | 2.7e-08 | 5.7 | 7.8 | 5.9e-15 | -0.53 | 0.08 | 0.86 | FALSE |
14 | GTEx | Adipose Visceral Omentum | ADAL | 0.23 | 0.11 | lasso | 3 | 0.17 | 3.7e-09 | -5.6 | 5.2 | 1.5e-07 | 0.06 | 0.07 | 0.93 | FALSE |
15 | GTEx | Adipose Visceral Omentum | SRP14-AS1 | 0.24 | 0.20 | lasso | 2 | 0.17 | 3.6e-09 | -5.3 | 5.3 | 1.4e-07 | -0.37 | 0.99 | 0.00 | FALSE |
16 | GTEx | Artery Aorta | RPAP1 | 0.22 | 0.16 | lasso | 6 | 0.16 | 2.4e-09 | -4.3 | -5.1 | 3.0e-07 | 0.03 | 0.19 | 0.81 | FALSE |
17 | GTEx | Artery Aorta | EIF2AK4 | 0.31 | 0.08 | enet | 29 | 0.17 | 1.8e-09 | -5.3 | 5.6 | 2.4e-08 | -0.36 | 0.43 | 0.55 | FALSE |
18 | GTEx | Artery Aorta | RP11-23P13.4 | 0.10 | 0.02 | lasso | 4 | 0.02 | 2.7e-02 | 4.9 | -5.6 | 2.3e-08 | 0.03 | 0.15 | 0.29 | FALSE |
19 | GTEx | Artery Coronary | CATSPER2 | 0.81 | 0.14 | lasso | 12 | 0.03 | 3.0e-02 | -5.3 | 5.4 | 8.1e-08 | 0.04 | 0.14 | 0.37 | FALSE |
20 | GTEx | Artery Tibial | RPAP1 | 0.27 | 0.27 | enet | 14 | 0.28 | 1.7e-22 | -4.9 | -6.1 | 9.6e-10 | 0.05 | 0.50 | 0.50 | FALSE |
21 | GTEx | Artery Tibial | EIF2AK4 | 0.28 | 0.18 | lasso | 6 | 0.17 | 3.1e-13 | -5.3 | 5.2 | 2.4e-07 | -0.35 | 1.00 | 0.00 | FALSE |
22 | GTEx | Brain Cerebellum | RPAP1 | 0.16 | 0.10 | lasso | 5 | 0.12 | 1.6e-04 | 6.7 | -5.9 | 3.3e-09 | 0.04 | 0.06 | 0.77 | FALSE |
23 | GTEx | Brain Cerebellum | SRP14 | 0.26 | 0.00 | enet | 8 | 0.04 | 2.3e-02 | 5.7 | 5.1 | 3.0e-07 | -0.33 | 0.06 | 0.18 | FALSE |
24 | GTEx | Brain Cortex | RTF1 | 0.35 | 0.12 | enet | 15 | 0.07 | 7.2e-03 | -6.4 | 6.9 | 5.7e-12 | 0.00 | 0.04 | 0.40 | FALSE |
25 | GTEx | Brain Frontal Cortex BA9 | ZSCAN29 | 0.18 | 0.00 | enet | 31 | 0.14 | 1.5e-04 | -4.0 | -6.3 | 3.4e-10 | 0.06 | 0.11 | 0.18 | FALSE |
26 | GTEx | Breast Mammary Tissue | RPAP1 | 0.15 | 0.14 | enet | 13 | 0.16 | 1.9e-08 | -4.9 | -6.3 | 3.6e-10 | 0.08 | 0.05 | 0.95 | FALSE |
27 | GTEx | Breast Mammary Tissue | EIF2AK4 | 0.24 | 0.10 | lasso | 8 | 0.06 | 3.2e-04 | 5.7 | 6.3 | 2.7e-10 | -0.49 | 0.10 | 0.84 | FALSE |
28 | GTEx | Breast Mammary Tissue | SRP14-AS1 | 0.16 | 0.22 | lasso | 1 | 0.20 | 2.4e-10 | -5.3 | 5.3 | 9.5e-08 | -0.37 | 1.00 | 0.00 | FALSE |
29 | GTEx | Breast Mammary Tissue (Female) | RPAP1 | 0.27 | 0.11 | lasso | 5 | 0.18 | 3.8e-06 | 6.7 | -6.0 | 2.6e-09 | 0.07 | 0.01 | 0.98 | FALSE |
30 | GTEx | Breast Mammary Tissue (Female) | SRP14-AS1 | 0.19 | 0.24 | lasso | 2 | 0.19 | 3.0e-06 | -5.3 | 5.3 | 9.6e-08 | -0.37 | 0.30 | 0.13 | FALSE |
31 | GTEx | Cells EBV-transformed lymphocytes | RPAP1 | 0.19 | 0.23 | lasso | 6 | 0.21 | 2.5e-07 | -4.9 | -5.2 | 2.0e-07 | 0.05 | 0.06 | 0.94 | FALSE |
32 | GTEx | Cells Transformed fibroblasts | TP53BP1 | 0.07 | 0.08 | lasso | 4 | 0.07 | 5.3e-06 | -5.6 | 5.4 | 7.4e-08 | 0.07 | 0.06 | 0.94 | FALSE |
33 | GTEx | Cells Transformed fibroblasts | RPAP1 | 0.37 | 0.42 | lasso | 8 | 0.43 | 1.2e-34 | -4.9 | -5.2 | 1.7e-07 | 0.04 | 1.00 | 0.00 | FALSE |
34 | GTEx | Cells Transformed fibroblasts | TUBGCP4 | 0.04 | 0.02 | lasso | 6 | 0.02 | 1.5e-02 | -5.2 | -5.6 | 1.9e-08 | -0.03 | 0.03 | 0.96 | FALSE |
35 | GTEx | Cells Transformed fibroblasts | ADAL | 0.29 | 0.15 | lasso | 10 | 0.24 | 2.2e-18 | -4.1 | 5.5 | 3.3e-08 | 0.04 | 0.04 | 0.96 | FALSE |
36 | GTEx | Cells Transformed fibroblasts | SRP14-AS1 | 0.19 | 0.13 | lasso | 2 | 0.13 | 7.8e-10 | -5.3 | 5.3 | 1.0e-07 | -0.37 | 0.99 | 0.01 | FALSE |
37 | GTEx | Colon Sigmoid | RPAP1 | 0.15 | 0.02 | enet | 9 | 0.02 | 9.3e-02 | 6.7 | -5.9 | 3.0e-09 | 0.07 | 0.04 | 0.56 | FALSE |
38 | GTEx | Colon Transverse | RPAP1 | 0.36 | 0.25 | lasso | 8 | 0.32 | 1.4e-15 | -4.8 | -6.1 | 1.3e-09 | 0.05 | 0.04 | 0.96 | FALSE |
39 | GTEx | Colon Transverse | EIF2AK4 | 0.40 | 0.16 | lasso | 4 | 0.15 | 9.2e-08 | 6.2 | 5.7 | 1.5e-08 | -0.39 | 0.48 | 0.50 | FALSE |
40 | GTEx | Esophagus Mucosa | RPAP1 | 0.28 | 0.20 | enet | 14 | 0.24 | 8.3e-16 | 6.7 | -6.4 | 1.8e-10 | 0.05 | 0.01 | 0.99 | FALSE |
41 | GTEx | Esophagus Mucosa | EIF2AK4 | 0.30 | 0.11 | lasso | 6 | 0.14 | 9.4e-10 | 6.2 | 6.6 | 3.3e-11 | -0.48 | 0.74 | 0.26 | FALSE |
42 | GTEx | Esophagus Mucosa | CHP1 | 0.19 | 0.10 | lasso | 7 | 0.09 | 1.4e-06 | -6.0 | 6.1 | 8.9e-10 | 0.04 | 0.74 | 0.26 | FALSE |
43 | GTEx | Esophagus Muscularis | TP53BP1 | 0.06 | 0.01 | lasso | 8 | 0.02 | 1.3e-02 | -4.1 | 5.4 | 6.4e-08 | -0.04 | 0.39 | 0.19 | FALSE |
44 | GTEx | Esophagus Muscularis | EIF2AK4 | 0.28 | 0.09 | enet | 15 | 0.20 | 5.3e-12 | -5.3 | 6.7 | 1.6e-11 | -0.49 | 0.67 | 0.32 | FALSE |
45 | GTEx | Heart Left Ventricle | LTK | 0.23 | 0.15 | enet | 5 | 0.17 | 1.5e-09 | 7.0 | 7.1 | 1.0e-12 | -0.08 | 0.00 | 1.00 | FALSE |
46 | GTEx | Heart Left Ventricle | SRP14-AS1 | 0.29 | 0.20 | lasso | 4 | 0.19 | 2.0e-10 | -5.3 | 5.5 | 3.7e-08 | -0.38 | 1.00 | 0.00 | FALSE |
47 | GTEx | Lung | LTK | 0.51 | 0.28 | lasso | 5 | 0.23 | 8.2e-18 | 7.0 | 7.0 | 1.9e-12 | -0.08 | 0.00 | 1.00 | FALSE |
48 | GTEx | Lung | TYRO3 | 0.28 | 0.17 | lasso | 5 | 0.19 | 1.4e-14 | 7.0 | 7.0 | 2.0e-12 | -0.08 | 0.00 | 1.00 | FALSE |
49 | GTEx | Lung | EIF2AK4 | 0.14 | 0.12 | enet | 10 | 0.12 | 2.0e-09 | 6.2 | 6.4 | 1.2e-10 | -0.43 | 0.87 | 0.12 | FALSE |
50 | GTEx | Lung | ITPKA | 0.16 | 0.06 | lasso | 3 | 0.06 | 2.2e-05 | 6.7 | 7.4 | 1.2e-13 | -0.08 | 0.00 | 1.00 | TRUE |
51 | GTEx | Lung | OIP5-AS1 | 0.09 | 0.08 | enet | 14 | 0.12 | 2.8e-09 | -5.7 | -5.4 | 7.9e-08 | -0.02 | 0.25 | 0.75 | FALSE |
52 | GTEx | Lung | SRP14-AS1 | 0.30 | 0.21 | lasso | 3 | 0.20 | 1.9e-15 | -5.3 | 5.2 | 2.1e-07 | -0.38 | 1.00 | 0.00 | FALSE |
53 | GTEx | Muscle Skeletal | SRP14-AS1 | 0.22 | 0.19 | lasso | 4 | 0.19 | 4.8e-18 | -5.3 | 5.1 | 3.1e-07 | -0.36 | 1.00 | 0.00 | FALSE |
54 | GTEx | Nerve Tibial | RPAP1 | 0.26 | 0.21 | lasso | 12 | 0.19 | 9.6e-14 | -4.8 | -5.8 | 9.0e-09 | 0.03 | 0.12 | 0.88 | TRUE |
55 | GTEx | Nerve Tibial | EHD4 | 0.20 | 0.04 | lasso | 7 | 0.08 | 2.4e-06 | 4.6 | -5.5 | 4.9e-08 | 0.10 | 0.95 | 0.01 | FALSE |
56 | GTEx | Nerve Tibial | EIF2AK4 | 0.29 | 0.04 | enet | 32 | 0.15 | 1.6e-10 | -5.3 | 5.5 | 3.4e-08 | -0.54 | 0.01 | 0.98 | FALSE |
57 | GTEx | Nerve Tibial | MAPKBP1 | 0.09 | 0.05 | lasso | 3 | 0.08 | 3.5e-06 | 3.4 | -5.3 | 9.1e-08 | 0.04 | 0.12 | 0.86 | FALSE |
58 | GTEx | Ovary | RPAP1 | 0.23 | 0.11 | lasso | 4 | 0.01 | 1.7e-01 | 6.7 | -5.3 | 9.6e-08 | 0.10 | 0.01 | 0.89 | FALSE |
59 | GTEx | Pancreas | RPAP1 | 0.22 | 0.11 | lasso | 5 | 0.13 | 4.2e-06 | 6.7 | -6.0 | 2.4e-09 | 0.05 | 0.02 | 0.96 | FALSE |
60 | GTEx | Pancreas | EIF2AK4 | 0.40 | 0.29 | lasso | 5 | 0.29 | 7.6e-13 | 5.7 | 5.9 | 4.0e-09 | -0.41 | 0.97 | 0.03 | FALSE |
61 | GTEx | Skin Not Sun Exposed Suprapubic | RPAP1 | 0.37 | 0.17 | enet | 18 | 0.19 | 1.1e-10 | -3.9 | -5.4 | 6.1e-08 | 0.07 | 0.59 | 0.41 | TRUE |
62 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-265N6.2 | 0.10 | 0.08 | enet | 20 | 0.08 | 4.1e-05 | -6.3 | -6.9 | 4.8e-12 | 0.03 | 0.03 | 0.93 | TRUE |
63 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-23P13.7 | 0.11 | 0.07 | lasso | 7 | 0.06 | 2.3e-04 | -4.6 | 5.2 | 2.3e-07 | -0.07 | 0.40 | 0.19 | FALSE |
64 | GTEx | Skin Sun Exposed Lower leg | RPAP1 | 0.31 | 0.23 | enet | 14 | 0.30 | 1.4e-25 | -4.9 | -6.0 | 2.6e-09 | 0.05 | 0.13 | 0.87 | FALSE |
65 | GTEx | Skin Sun Exposed Lower leg | EIF2AK4 | 0.34 | 0.15 | enet | 16 | 0.15 | 9.4e-13 | 5.7 | 6.8 | 1.0e-11 | -0.50 | 1.00 | 0.00 | FALSE |
66 | GTEx | Spleen | ADAL | 0.16 | 0.12 | lasso | 6 | 0.13 | 3.3e-04 | -4.2 | 5.1 | 3.1e-07 | 0.04 | 0.04 | 0.92 | FALSE |
67 | GTEx | Stomach | RPAP1 | 0.41 | 0.25 | lasso | 6 | 0.24 | 8.3e-12 | -4.9 | -5.6 | 2.3e-08 | 0.04 | 0.30 | 0.70 | FALSE |
68 | GTEx | Stomach | EIF2AK4 | 0.21 | 0.13 | lasso | 7 | 0.11 | 4.9e-06 | 6.2 | 5.8 | 8.9e-09 | -0.39 | 0.08 | 0.82 | FALSE |
69 | GTEx | Stomach | SPTBN5 | 0.11 | 0.03 | enet | 19 | 0.01 | 8.2e-02 | -3.9 | 5.9 | 4.4e-09 | -0.04 | 0.13 | 0.21 | FALSE |
70 | GTEx | Stomach | ADAL | 0.27 | 0.20 | lasso | 5 | 0.23 | 1.7e-11 | -5.6 | 5.2 | 1.5e-07 | 0.07 | 0.07 | 0.93 | FALSE |
71 | GTEx | Stomach | SRP14-AS1 | 0.20 | 0.19 | lasso | 1 | 0.18 | 7.1e-09 | -5.3 | 5.3 | 9.5e-08 | -0.37 | 0.95 | 0.01 | FALSE |
72 | GTEx | Testis | HAUS2 | 0.18 | 0.05 | lasso | 4 | 0.02 | 4.9e-02 | -6.3 | 5.6 | 1.8e-08 | -0.07 | 0.02 | 0.96 | FALSE |
73 | GTEx | Testis | LCMT2 | 0.14 | 0.08 | lasso | 5 | 0.14 | 6.7e-07 | -6.1 | 5.1 | 2.7e-07 | 0.04 | 0.02 | 0.96 | FALSE |
74 | GTEx | Thyroid | LTK | 0.12 | 0.09 | enet | 8 | 0.08 | 1.3e-06 | 7.0 | 6.9 | 5.4e-12 | -0.08 | 0.00 | 1.00 | FALSE |
75 | GTEx | Thyroid | EIF2AK4 | 0.31 | 0.18 | enet | 15 | 0.23 | 3.0e-17 | 6.2 | 5.3 | 9.0e-08 | -0.37 | 1.00 | 0.00 | FALSE |
76 | GTEx | Thyroid | RTF1 | 0.28 | 0.27 | lasso | 3 | 0.26 | 8.4e-20 | 6.4 | 6.3 | 2.5e-10 | 0.04 | 0.11 | 0.89 | FALSE |
77 | GTEx | Vagina | SPTBN5 | 0.22 | 0.03 | lasso | 6 | 0.04 | 4.2e-02 | -4.4 | 5.5 | 3.2e-08 | -0.04 | 0.07 | 0.28 | FALSE |
78 | GTEx | Vagina | ADAL | 0.21 | 0.07 | enet | 21 | 0.14 | 5.0e-04 | -4.2 | 5.5 | 4.9e-08 | 0.03 | 0.07 | 0.84 | FALSE |
79 | METSIM | Adipose | EIF2AK4 | 0.24 | 0.04 | enet | 25 | 0.17 | 1.1e-24 | 6.2 | 7.5 | 5.9e-14 | -0.65 | 0.13 | 0.87 | FALSE |
80 | METSIM | Adipose | JMJD7 | 0.16 | 0.20 | lasso | 11 | 0.22 | 5.6e-32 | -4.7 | 5.2 | 2.5e-07 | -0.07 | 1.00 | 0.00 | FALSE |
81 | METSIM | Adipose | RPAP1 | 0.11 | 0.12 | enet | 11 | 0.12 | 7.0e-17 | 6.7 | -6.5 | 8.6e-11 | 0.05 | 0.00 | 1.00 | FALSE |
82 | METSIM | Adipose | SRP14-AS1 | 0.35 | 0.28 | lasso | 3 | 0.27 | 2.0e-40 | -5.3 | 5.3 | 9.5e-08 | -0.37 | 1.00 | 0.00 | FALSE |
83 | NTR | Blood | INO80 | 0.02 | 0.02 | enet | 8 | 0.03 | 2.8e-09 | -6.4 | 5.4 | 6.1e-08 | 0.01 | 0.12 | 0.88 | FALSE |
84 | NTR | Blood | LCMT2 | 0.01 | 0.00 | blup | 267 | 0.00 | 7.5e-03 | -5.1 | 5.8 | 8.9e-09 | 0.03 | 0.14 | 0.58 | FALSE |
85 | YFS | Blood | ADAL | 0.04 | 0.05 | blup | 264 | 0.04 | 5.2e-14 | -5.4 | 5.5 | 3.6e-08 | 0.06 | 0.18 | 0.82 | FALSE |
86 | YFS | Blood | BMF | 0.06 | 0.01 | lasso | 3 | 0.02 | 6.4e-07 | -6.2 | -5.5 | 2.9e-08 | 0.34 | 0.56 | 0.01 | FALSE |
87 | YFS | Blood | RPAP1 | 0.08 | 0.10 | lasso | 5 | 0.09 | 3.6e-29 | 5.2 | -5.2 | 2.1e-07 | 0.04 | 0.99 | 0.01 | FALSE |
88 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ADAL | 0.09 | 0.05 | lasso | 5 | 0.03 | 1.1e-03 | -4.7 | 5.4 | 5.7e-08 | 0.01 | 0.03 | 0.90 | FALSE |
89 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CATSPER2 | 0.05 | 0.06 | blup | 12 | 0.06 | 1.6e-05 | -5.4 | 5.2 | 2.0e-07 | 0.04 | 0.01 | 0.99 | FALSE |
90 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CHP | 0.01 | 0.01 | blup | 54 | 0.01 | 1.4e-02 | -5.6 | 5.2 | 2.3e-07 | 0.03 | 0.08 | 0.16 | FALSE |
91 | The Cancer Genome Atlas | Breast Invasive Carcinoma | EIF2AK4 | 0.05 | 0.03 | lasso | 7 | 0.03 | 9.5e-07 | 5.7 | 5.9 | 3.6e-09 | -0.56 | 0.10 | 0.87 | FALSE |
92 | The Cancer Genome Atlas | Breast Invasive Carcinoma | HAUS2 | 0.01 | 0.01 | blup | 25 | 0.01 | 9.9e-04 | -6.1 | 6.4 | 1.9e-10 | -0.08 | 0.02 | 0.90 | FALSE |
93 | The Cancer Genome Atlas | Breast Invasive Carcinoma | TUBGCP4 | 0.01 | 0.02 | blup | 50 | 0.01 | 8.4e-04 | -5.4 | -5.4 | 8.3e-08 | -0.07 | 0.01 | 0.98 | FALSE |
94 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | CATSPER2 | 0.08 | 0.11 | lasso | 1 | 0.10 | 1.1e-05 | -5.4 | 5.4 | 7.8e-08 | 0.03 | 0.01 | 0.99 | FALSE |
95 | The Cancer Genome Atlas | Colon Adenocarcinoma | RPAP1 | 0.15 | 0.17 | blup | 56 | 0.17 | 6.2e-10 | -3.9 | -5.2 | 2.0e-07 | 0.04 | 0.07 | 0.93 | FALSE |
96 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CHP | 0.06 | 0.01 | blup | 54 | 0.03 | 4.7e-04 | -2.7 | 6.2 | 6.4e-10 | 0.00 | 0.09 | 0.38 | FALSE |
97 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | EIF2AK4 | 0.11 | 0.04 | lasso | 4 | 0.06 | 2.1e-07 | 5.7 | 8.9 | 5.0e-19 | -0.82 | 0.00 | 1.00 | FALSE |
98 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | TUBGCP4 | 0.03 | 0.01 | enet | 8 | 0.03 | 1.7e-04 | -4.7 | -6.0 | 1.9e-09 | 0.03 | 0.02 | 0.93 | FALSE |
99 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | EIF2AK4 | 0.12 | 0.06 | enet | 5 | 0.09 | 2.4e-10 | -5.3 | 8.7 | 2.4e-18 | -0.71 | 0.04 | 0.96 | FALSE |
100 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TUBGCP4 | 0.05 | 0.07 | lasso | 5 | 0.05 | 1.4e-06 | -5.6 | -5.7 | 1.5e-08 | -0.07 | 0.03 | 0.97 | FALSE |
101 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TYRO3 | 0.03 | 0.05 | enet | 5 | 0.05 | 6.2e-06 | 7.0 | 6.6 | 5.4e-11 | -0.06 | 0.00 | 1.00 | FALSE |
102 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ADAL | 0.10 | 0.12 | blup | 43 | 0.12 | 1.2e-07 | -4.1 | 5.1 | 3.0e-07 | 0.05 | 0.06 | 0.94 | FALSE |
103 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CATSPER2 | 0.04 | 0.03 | lasso | 3 | 0.03 | 7.8e-03 | -5.1 | 5.2 | 2.7e-07 | 0.03 | 0.01 | 0.71 | FALSE |
104 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | RPAP1 | 0.10 | 0.07 | enet | 6 | 0.07 | 1.0e-04 | -4.8 | -6.1 | 9.7e-10 | 0.06 | 0.01 | 0.99 | FALSE |
105 | The Cancer Genome Atlas | Brain Lower Grade Glioma | HAUS2 | 0.03 | 0.02 | lasso | 3 | 0.02 | 2.9e-03 | -5.9 | 5.9 | 3.5e-09 | -0.10 | 0.02 | 0.45 | FALSE |
106 | The Cancer Genome Atlas | Brain Lower Grade Glioma | STRC | 0.26 | 0.23 | lasso | 2 | 0.23 | 5.1e-26 | -4.8 | -5.3 | 1.1e-07 | 0.03 | 0.08 | 0.91 | FALSE |
107 | The Cancer Genome Atlas | Lung Adenocarcinoma | CATSPER2 | 0.02 | 0.03 | enet | 1 | 0.03 | 4.9e-04 | -5.2 | 5.2 | 2.2e-07 | 0.05 | 0.01 | 0.89 | FALSE |
108 | The Cancer Genome Atlas | Lung Adenocarcinoma | EIF2AK4 | 0.09 | 0.02 | enet | 10 | 0.04 | 8.2e-06 | 6.2 | 6.3 | 3.0e-10 | -0.49 | 0.08 | 0.74 | FALSE |
109 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CATSPER2 | 0.04 | 0.05 | lasso | 2 | 0.04 | 9.9e-06 | -5.2 | 5.2 | 1.8e-07 | 0.04 | 0.01 | 0.99 | FALSE |
110 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | EIF2AK4 | 0.05 | 0.05 | lasso | 1 | 0.04 | 3.0e-05 | -9.9 | 9.9 | 5.1e-23 | -1.00 | 0.00 | 1.00 | TRUE |
111 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | LOC729082 | 0.06 | 0.01 | enet | 6 | 0.03 | 3.3e-04 | -5.7 | 5.6 | 2.5e-08 | 0.04 | 0.03 | 0.34 | FALSE |
112 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | RPAP1 | 0.06 | 0.09 | enet | 6 | 0.08 | 2.3e-09 | -4.9 | -5.3 | 1.1e-07 | 0.04 | 0.51 | 0.49 | FALSE |
113 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | TUBGCP4 | 0.04 | 0.00 | blup | 50 | 0.00 | 1.6e-01 | -6.1 | -5.8 | 6.8e-09 | -0.03 | 0.01 | 0.81 | FALSE |
114 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | EIF2AK4 | 0.22 | 0.06 | lasso | 4 | 0.10 | 6.9e-05 | -5.7 | 9.2 | 2.9e-20 | -0.76 | 0.00 | 0.96 | FALSE |
115 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | INO80 | 0.07 | 0.04 | blup | 40 | 0.06 | 1.2e-03 | -1.7 | -5.5 | 5.0e-08 | 0.00 | 0.02 | 0.80 | FALSE |
116 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | RPAP1 | 0.17 | 0.04 | blup | 56 | 0.09 | 1.9e-04 | 6.7 | -5.3 | 9.3e-08 | 0.06 | 0.01 | 0.95 | FALSE |
117 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | RPAP1 | 0.12 | 0.08 | lasso | 4 | 0.09 | 1.7e-04 | 4.9 | -5.4 | 7.8e-08 | 0.02 | 0.08 | 0.80 | FALSE |
118 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ADAL | 0.14 | 0.13 | blup | 43 | 0.15 | 3.0e-15 | -5.6 | 5.5 | 3.1e-08 | 0.06 | 0.06 | 0.94 | FALSE |
119 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CCNDBP1 | 0.05 | 0.01 | enet | 10 | 0.03 | 1.5e-04 | -4.0 | 5.4 | 5.6e-08 | 0.01 | 0.00 | 0.72 | FALSE |
120 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CHP | 0.21 | 0.11 | lasso | 4 | 0.12 | 5.1e-13 | -6.6 | 7.4 | 1.3e-13 | 0.01 | 0.00 | 1.00 | TRUE |
121 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CKMT1A | 0.03 | 0.04 | lasso | 1 | 0.04 | 5.2e-05 | -5.3 | 5.3 | 9.4e-08 | 0.02 | 0.00 | 0.98 | FALSE |
122 | The Cancer Genome Atlas | Prostate Adenocarcinoma | EIF2AK4 | 0.07 | 0.02 | enet | 5 | 0.02 | 5.4e-03 | -5.3 | 8.1 | 3.9e-16 | -0.62 | 0.02 | 0.88 | FALSE |
123 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SRP14 | 0.05 | 0.00 | blup | 64 | 0.02 | 4.5e-03 | 2.5 | 5.5 | 4.7e-08 | -0.42 | 0.01 | 0.66 | FALSE |
124 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TP53BP1 | 0.10 | 0.00 | enet | 9 | 0.04 | 4.1e-05 | -5.6 | 5.6 | 2.2e-08 | 0.01 | 0.02 | 0.42 | FALSE |
125 | The Cancer Genome Atlas | Soft Tissue Sarcoma | ADAL | 0.08 | 0.09 | enet | 6 | 0.09 | 3.7e-06 | -5.5 | 5.5 | 3.9e-08 | 0.08 | 0.04 | 0.95 | FALSE |
126 | The Cancer Genome Atlas | Soft Tissue Sarcoma | CATSPER2 | 0.05 | 0.07 | lasso | 7 | 0.07 | 9.6e-05 | -5.4 | 5.4 | 7.8e-08 | 0.03 | 0.01 | 0.96 | FALSE |
127 | The Cancer Genome Atlas | Stomach Adenocarcinoma | ADAL | 0.13 | 0.07 | blup | 43 | 0.09 | 7.4e-07 | -4.1 | 5.1 | 3.1e-07 | 0.06 | 0.05 | 0.95 | FALSE |
128 | The Cancer Genome Atlas | Stomach Adenocarcinoma | LCMT2 | 0.06 | 0.04 | blup | 39 | 0.03 | 1.5e-03 | -5.6 | 5.2 | 2.5e-07 | 0.06 | 0.01 | 0.97 | FALSE |
129 | The Cancer Genome Atlas | Stomach Adenocarcinoma | TUBGCP4 | 0.03 | 0.01 | blup | 50 | 0.03 | 4.6e-03 | -5.6 | -5.6 | 1.8e-08 | -0.02 | 0.01 | 0.70 | FALSE |
130 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | EXD1 | 0.33 | 0.04 | enet | 12 | 0.12 | 6.1e-05 | -5.3 | -5.8 | 7.0e-09 | -0.01 | 0.06 | 0.09 | FALSE |
131 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | RPAP1 | 0.19 | 0.15 | lasso | 3 | 0.10 | 1.7e-04 | 6.1 | -6.1 | 9.2e-10 | 0.06 | 0.03 | 0.90 | FALSE |
132 | The Cancer Genome Atlas | Thyroid Carcinoma | CATSPER2 | 0.05 | 0.05 | lasso | 1 | 0.05 | 7.7e-06 | -5.2 | 5.2 | 1.9e-07 | 0.02 | 0.01 | 0.98 | FALSE |
133 | The Cancer Genome Atlas | Thyroid Carcinoma | EIF2AK4 | 0.15 | 0.07 | lasso | 5 | 0.09 | 4.9e-09 | 5.7 | 7.3 | 2.7e-13 | -0.51 | 0.99 | 0.01 | FALSE |
134 | The Cancer Genome Atlas | Thyroid Carcinoma | RTF1 | 0.04 | 0.02 | lasso | 3 | 0.02 | 4.0e-03 | 6.4 | 5.8 | 5.2e-09 | 0.04 | 0.02 | 0.86 | FALSE |
135 | The Cancer Genome Atlas | Thyroid Carcinoma | STRC | 0.32 | 0.23 | enet | 5 | 0.24 | 3.1e-23 | -4.8 | -6.0 | 2.6e-09 | 0.04 | 0.08 | 0.91 | FALSE |
136 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | STRC | 0.34 | 0.03 | enet | 12 | 0.02 | 8.3e-02 | -4.8 | -5.7 | 1.6e-08 | 0.11 | 0.00 | 0.12 | FALSE |
137 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | WDR76 | 0.13 | 0.10 | blup | 44 | 0.12 | 3.9e-04 | -5.4 | 5.8 | 5.0e-09 | -0.03 | 0.03 | 0.68 | FALSE |