Best TWAS P=1.43e-57 · Best GWAS P=1.57e-74 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | AXIN1 | 0.06 | 0.01 | blup | 366 | 0.02 | 1.3e-03 | -5.32 | 7.4 | 1.6e-13 | 0.34 | 0.17 | 0.08 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | NPRL3 | 0.32 | 0.20 | enet | 22 | 0.26 | 1.0e-31 | -9.76 | 9.0 | 1.9e-19 | 0.47 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | SLC9A3R2 | 0.15 | 0.09 | enet | 7 | 0.10 | 7.8e-12 | -7.36 | 7.6 | 2.3e-14 | 0.00 | 0.00 | 1.00 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | SNRNP25 | 0.32 | 0.19 | bslmm | 230 | 0.19 | 5.5e-23 | -4.31 | 6.4 | 1.7e-10 | 0.16 | 1.00 | 0.00 | TRUE |
5 | GTEx | Adipose Subcutaneous | NPRL3 | 0.48 | 0.32 | enet | 14 | 0.36 | 1.0e-30 | -9.76 | 11.0 | 3.7e-28 | 0.59 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | NME4 | 0.12 | 0.13 | lasso | 2 | 0.12 | 6.5e-10 | 5.17 | -5.2 | 1.6e-07 | -0.06 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | SNRNP25 | 0.12 | 0.03 | lasso | 4 | 0.12 | 7.0e-10 | -4.67 | -6.6 | 4.0e-11 | -0.31 | 0.90 | 0.04 | FALSE |
8 | GTEx | Adipose Subcutaneous | ITFG3 | 0.14 | 0.02 | lasso | 5 | 0.04 | 4.8e-04 | -6.97 | 6.1 | 8.6e-10 | 0.13 | 0.64 | 0.13 | FALSE |
9 | GTEx | Adipose Visceral Omentum | NPRL3 | 0.33 | 0.20 | enet | 14 | 0.30 | 4.0e-16 | -14.68 | 10.9 | 8.6e-28 | 0.72 | 0.14 | 0.86 | FALSE |
10 | GTEx | Adipose Visceral Omentum | NME4 | 0.18 | 0.06 | enet | 21 | 0.07 | 1.7e-04 | 5.77 | -7.6 | 2.8e-14 | -0.10 | 0.37 | 0.04 | FALSE |
11 | GTEx | Adrenal Gland | NPRL3 | 0.21 | 0.09 | enet | 9 | 0.10 | 2.3e-04 | -9.76 | 11.6 | 4.8e-31 | 0.61 | 0.15 | 0.32 | FALSE |
12 | GTEx | Artery Aorta | NPRL3 | 0.47 | 0.34 | lasso | 7 | 0.36 | 1.1e-20 | -9.76 | 8.8 | 1.3e-18 | 0.64 | 1.00 | 0.00 | FALSE |
13 | GTEx | Artery Aorta | NME4 | 0.25 | 0.25 | lasso | 2 | 0.23 | 9.8e-13 | 5.17 | -5.4 | 8.2e-08 | -0.08 | 1.00 | 0.00 | FALSE |
14 | GTEx | Artery Aorta | LA16c-OS12.2 | 0.26 | 0.01 | enet | 15 | 0.10 | 4.0e-06 | 4.69 | 6.2 | 4.9e-10 | -0.07 | 0.24 | 0.05 | FALSE |
15 | GTEx | Artery Coronary | NPRL3 | 0.42 | 0.27 | lasso | 5 | 0.23 | 2.4e-08 | -9.76 | 7.8 | 5.9e-15 | 0.61 | 0.61 | 0.32 | FALSE |
16 | GTEx | Artery Coronary | NME4 | 0.20 | 0.02 | lasso | 5 | 0.04 | 1.8e-02 | 4.80 | -6.1 | 1.3e-09 | -0.08 | 0.20 | 0.05 | FALSE |
17 | GTEx | Artery Tibial | NPRL3 | 0.31 | 0.20 | enet | 11 | 0.17 | 5.2e-13 | -9.76 | 9.5 | 2.6e-21 | 0.63 | 1.00 | 0.00 | FALSE |
18 | GTEx | Artery Tibial | NME4 | 0.33 | 0.24 | enet | 25 | 0.28 | 1.0e-21 | 4.94 | -6.6 | 3.1e-11 | -0.10 | 1.00 | 0.00 | FALSE |
19 | GTEx | Artery Tibial | POLR3K | 0.12 | 0.00 | lasso | 4 | 0.00 | 1.3e-01 | -4.88 | -6.1 | 1.1e-09 | -0.33 | 0.11 | 0.03 | FALSE |
20 | GTEx | Artery Tibial | ITFG3 | 0.11 | 0.09 | lasso | 3 | 0.09 | 1.6e-07 | -6.97 | 8.6 | 9.3e-18 | 0.13 | 0.93 | 0.00 | FALSE |
21 | GTEx | Artery Tibial | LA16c-OS12.2 | 0.17 | 0.08 | enet | 19 | 0.08 | 5.0e-07 | 5.32 | 9.7 | 2.8e-22 | 0.01 | 0.74 | 0.01 | FALSE |
22 | GTEx | Artery Tibial | Z69720.2 | 0.11 | 0.01 | lasso | 3 | 0.00 | 3.5e-01 | -12.06 | -16.0 | 1.4e-57 | -0.28 | 0.03 | 0.07 | TRUE |
23 | GTEx | Brain Caudate basal ganglia | NPRL3 | 0.28 | 0.12 | enet | 18 | 0.11 | 4.1e-04 | -9.76 | 11.3 | 1.2e-29 | 0.76 | 0.00 | 0.97 | FALSE |
24 | GTEx | Brain Cerebellar Hemisphere | RHBDF1 | 0.31 | 0.11 | enet | 16 | 0.19 | 1.5e-05 | -4.67 | -8.4 | 4.8e-17 | -0.29 | 0.07 | 0.26 | FALSE |
25 | GTEx | Brain Cerebellar Hemisphere | POLR3K | 0.33 | 0.01 | lasso | 9 | 0.04 | 3.1e-02 | 3.40 | -8.1 | 6.1e-16 | -0.23 | 0.06 | 0.07 | FALSE |
26 | GTEx | Brain Cerebellum | SNRNP25 | 0.25 | 0.02 | enet | 25 | 0.16 | 2.5e-05 | -1.38 | -9.3 | 1.8e-20 | -0.22 | 0.06 | 0.06 | FALSE |
27 | GTEx | Brain Cerebellum | LA16c-OS12.2 | 0.15 | 0.20 | lasso | 2 | 0.23 | 2.3e-07 | 5.32 | 5.5 | 2.8e-08 | -0.08 | 0.73 | 0.02 | FALSE |
28 | GTEx | Brain Cortex | PIGQ | 0.43 | 0.41 | lasso | 4 | 0.36 | 1.0e-10 | 3.88 | -5.4 | 6.7e-08 | -0.13 | 1.00 | 0.00 | TRUE |
29 | GTEx | Brain Cortex | NPRL3 | 0.51 | 0.26 | enet | 7 | 0.23 | 5.6e-07 | -9.76 | 12.2 | 4.7e-34 | 0.71 | 0.22 | 0.75 | FALSE |
30 | GTEx | Brain Frontal Cortex BA9 | NPRL3 | 0.48 | 0.28 | lasso | 7 | 0.26 | 1.2e-07 | -9.76 | 7.9 | 3.4e-15 | 0.48 | 0.25 | 0.35 | FALSE |
31 | GTEx | Brain Frontal Cortex BA9 | NME4 | 0.23 | 0.15 | lasso | 4 | 0.12 | 4.3e-04 | 5.77 | -5.2 | 1.7e-07 | -0.05 | 0.19 | 0.06 | FALSE |
32 | GTEx | Brain Hypothalamus | DECR2 | 0.27 | 0.23 | lasso | 3 | 0.25 | 1.2e-06 | 4.99 | 5.1 | 3.0e-07 | 0.05 | 0.29 | 0.08 | FALSE |
33 | GTEx | Brain Nucleus accumbens basal ganglia | NPRL3 | 0.43 | 0.20 | lasso | 7 | 0.14 | 1.3e-04 | -9.76 | 9.8 | 1.9e-22 | 0.61 | 0.07 | 0.18 | FALSE |
34 | GTEx | Brain Nucleus accumbens basal ganglia | AL022341.3 | 0.26 | 0.04 | lasso | 4 | 0.06 | 8.1e-03 | 6.53 | 5.7 | 9.7e-09 | 0.10 | 0.13 | 0.06 | FALSE |
35 | GTEx | Breast Mammary Tissue | NPRL3 | 0.43 | 0.27 | lasso | 2 | 0.27 | 5.3e-14 | -9.76 | 11.2 | 4.0e-29 | 0.69 | 0.99 | 0.01 | FALSE |
36 | GTEx | Breast Mammary Tissue (Male) | NPRL3 | 0.07 | 0.04 | lasso | 1 | 0.00 | 3.8e-01 | -9.76 | 9.8 | 1.7e-22 | 0.66 | 0.02 | 0.10 | FALSE |
37 | GTEx | Breast Mammary Tissue (Male) | NME4 | 0.19 | -0.01 | lasso | 4 | 0.00 | 2.5e-01 | 5.17 | -5.5 | 2.9e-08 | -0.01 | 0.04 | 0.05 | FALSE |
38 | GTEx | Breast Mammary Tissue (Female) | NPRL3 | 0.32 | 0.28 | lasso | 4 | 0.25 | 3.6e-08 | -9.76 | 13.2 | 1.5e-39 | 0.77 | 0.04 | 0.95 | TRUE |
39 | GTEx | Breast Mammary Tissue (Female) | NME4 | 0.20 | 0.13 | lasso | 3 | 0.09 | 9.7e-04 | 5.77 | -5.7 | 1.2e-08 | -0.06 | 0.15 | 0.05 | FALSE |
40 | GTEx | Breast Mammary Tissue (Female) | RHBDL1 | 0.12 | 0.01 | enet | 6 | 0.02 | 1.0e-01 | 4.70 | 5.2 | 2.6e-07 | 0.05 | 0.07 | 0.05 | FALSE |
41 | GTEx | Breast Mammary Tissue (Female) | LA16c-OS12.2 | 0.05 | -0.01 | lasso | 1 | 0.00 | 4.7e-01 | -12.34 | 12.3 | 5.4e-35 | 0.28 | 0.02 | 0.07 | TRUE |
42 | GTEx | Cells EBV-transformed lymphocytes | NPRL3 | 0.19 | 0.17 | lasso | 2 | 0.17 | 3.7e-06 | -14.68 | 13.9 | 8.2e-44 | 0.73 | 0.29 | 0.60 | FALSE |
43 | GTEx | Cells EBV-transformed lymphocytes | DECR2 | 0.37 | 0.02 | enet | 39 | 0.06 | 4.7e-03 | 4.99 | 9.9 | 3.6e-23 | 0.24 | 0.17 | 0.15 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | NPRL3 | 0.37 | 0.24 | lasso | 7 | 0.30 | 5.5e-23 | -14.68 | 12.7 | 4.5e-37 | 0.71 | 1.00 | 0.00 | FALSE |
45 | GTEx | Colon Sigmoid | NPRL3 | 0.28 | 0.24 | lasso | 7 | 0.22 | 2.8e-08 | -9.76 | 11.7 | 1.4e-31 | 0.70 | 0.67 | 0.26 | FALSE |
46 | GTEx | Colon Sigmoid | SNRNP25 | 0.51 | 0.12 | lasso | 5 | 0.34 | 1.1e-12 | -4.67 | -6.3 | 2.4e-10 | -0.30 | 0.54 | 0.06 | FALSE |
47 | GTEx | Colon Sigmoid | ITFG3 | 0.21 | 0.00 | enet | 14 | 0.05 | 8.3e-03 | -7.61 | 7.7 | 1.5e-14 | -0.02 | 0.08 | 0.06 | TRUE |
48 | GTEx | Colon Sigmoid | LA16c-OS12.2 | 0.26 | 0.15 | lasso | 5 | 0.14 | 1.6e-05 | 4.69 | 9.9 | 3.5e-23 | 0.10 | 0.12 | 0.22 | FALSE |
49 | GTEx | Colon Transverse | NPRL3 | 0.33 | 0.24 | lasso | 5 | 0.22 | 7.6e-11 | -9.76 | 13.0 | 1.3e-38 | 0.67 | 0.75 | 0.24 | FALSE |
50 | GTEx | Esophagus Gastroesophageal Junction | NPRL3 | 0.52 | 0.45 | enet | 16 | 0.47 | 4.3e-19 | -9.76 | 10.4 | 2.8e-25 | 0.66 | 0.90 | 0.10 | FALSE |
51 | GTEx | Esophagus Gastroesophageal Junction | RAB40C | 0.21 | -0.01 | lasso | 4 | 0.05 | 8.1e-03 | 2.20 | 7.0 | 1.9e-12 | 0.10 | 0.06 | 0.43 | TRUE |
52 | GTEx | Esophagus Gastroesophageal Junction | LA16c-OS12.2 | 0.26 | 0.05 | enet | 23 | 0.07 | 1.2e-03 | -9.76 | 6.0 | 2.6e-09 | 0.27 | 0.04 | 0.33 | FALSE |
53 | GTEx | Esophagus Mucosa | NPRL3 | 0.40 | 0.27 | lasso | 5 | 0.27 | 1.6e-18 | -9.76 | 11.8 | 4.5e-32 | 0.68 | 1.00 | 0.00 | FALSE |
54 | GTEx | Esophagus Muscularis | RGS11 | 0.16 | 0.05 | lasso | 9 | 0.07 | 7.6e-05 | 7.26 | -6.5 | 7.6e-11 | -0.35 | 0.52 | 0.31 | FALSE |
55 | GTEx | Esophagus Muscularis | AXIN1 | 0.17 | 0.02 | enet | 20 | 0.07 | 4.9e-05 | 3.17 | 6.9 | 4.5e-12 | 0.19 | 0.42 | 0.08 | TRUE |
56 | GTEx | Esophagus Muscularis | NPRL3 | 0.50 | 0.28 | enet | 21 | 0.39 | 8.7e-25 | -9.76 | 9.2 | 4.0e-20 | 0.58 | 1.00 | 0.00 | FALSE |
57 | GTEx | Esophagus Muscularis | NME4 | 0.36 | 0.24 | lasso | 7 | 0.24 | 5.7e-15 | 5.17 | -5.8 | 7.5e-09 | -0.09 | 1.00 | 0.00 | FALSE |
58 | GTEx | Esophagus Muscularis | ARHGDIG | 0.16 | 0.00 | enet | 28 | 0.02 | 2.5e-02 | 7.26 | -5.6 | 1.9e-08 | -0.45 | 0.02 | 0.83 | FALSE |
59 | GTEx | Esophagus Muscularis | LA16c-OS12.2 | 0.22 | 0.14 | enet | 15 | 0.16 | 1.0e-09 | 5.32 | 10.9 | 1.2e-27 | 0.04 | 0.98 | 0.00 | TRUE |
60 | GTEx | Heart Atrial Appendage | NPRL3 | 0.22 | 0.22 | lasso | 5 | 0.19 | 9.7e-09 | -9.76 | 10.4 | 1.8e-25 | 0.66 | 0.86 | 0.12 | FALSE |
61 | GTEx | Heart Atrial Appendage | NME4 | 0.29 | 0.14 | lasso | 6 | 0.15 | 2.3e-07 | 4.94 | -5.8 | 8.1e-09 | -0.08 | 0.97 | 0.00 | FALSE |
62 | GTEx | Heart Atrial Appendage | ARHGDIG | 0.23 | 0.04 | enet | 9 | 0.09 | 8.9e-05 | 5.74 | 5.8 | 5.7e-09 | 0.14 | 0.72 | 0.03 | FALSE |
63 | GTEx | Heart Left Ventricle | NPRL3 | 0.33 | 0.24 | lasso | 3 | 0.23 | 1.3e-12 | -9.76 | 9.6 | 8.7e-22 | 0.64 | 1.00 | 0.00 | FALSE |
64 | GTEx | Liver | NME4 | 0.38 | 0.10 | lasso | 5 | 0.05 | 2.0e-02 | 5.17 | -6.3 | 2.3e-10 | -0.17 | 0.12 | 0.08 | FALSE |
65 | GTEx | Liver | DECR2 | 0.34 | 0.25 | lasso | 4 | 0.20 | 2.3e-06 | 4.99 | 5.2 | 2.2e-07 | 0.05 | 0.40 | 0.05 | TRUE |
66 | GTEx | Lung | NPRL3 | 0.38 | 0.30 | enet | 29 | 0.32 | 2.0e-25 | -9.76 | 10.5 | 7.0e-26 | 0.56 | 1.00 | 0.00 | FALSE |
67 | GTEx | Lung | C16orf13 | 0.16 | 0.11 | enet | 23 | 0.19 | 1.1e-14 | 2.33 | 5.2 | 2.0e-07 | 0.10 | 1.00 | 0.00 | FALSE |
68 | GTEx | Muscle Skeletal | NPRL3 | 0.34 | 0.13 | enet | 23 | 0.20 | 1.5e-19 | -9.76 | 9.0 | 1.6e-19 | 0.46 | 1.00 | 0.00 | FALSE |
69 | GTEx | Muscle Skeletal | NME4 | 0.34 | 0.28 | enet | 16 | 0.28 | 6.2e-28 | 4.94 | -6.3 | 3.2e-10 | -0.14 | 1.00 | 0.00 | FALSE |
70 | GTEx | Muscle Skeletal | SNRNP25 | 0.16 | 0.04 | lasso | 5 | 0.11 | 5.6e-11 | -3.65 | -6.4 | 1.6e-10 | -0.38 | 0.97 | 0.03 | FALSE |
71 | GTEx | Muscle Skeletal | ITFG3 | 0.11 | 0.05 | lasso | 4 | 0.06 | 3.0e-06 | -10.63 | -13.0 | 1.4e-38 | -0.28 | 0.85 | 0.01 | FALSE |
72 | GTEx | Nerve Tibial | NPRL3 | 0.55 | 0.43 | lasso | 11 | 0.45 | 7.3e-35 | -9.76 | 11.1 | 1.5e-28 | 0.65 | 1.00 | 0.00 | FALSE |
73 | GTEx | Nerve Tibial | NME4 | 0.26 | 0.22 | enet | 19 | 0.24 | 8.9e-17 | 5.17 | -5.2 | 1.7e-07 | -0.06 | 1.00 | 0.00 | FALSE |
74 | GTEx | Nerve Tibial | ITFG3 | 0.20 | 0.06 | lasso | 7 | 0.10 | 1.8e-07 | -6.97 | 7.6 | 2.8e-14 | 0.22 | 0.98 | 0.01 | FALSE |
75 | GTEx | Nerve Tibial | DECR2 | 0.36 | 0.23 | enet | 17 | 0.28 | 1.1e-19 | 4.99 | 6.4 | 1.7e-10 | 0.09 | 1.00 | 0.00 | TRUE |
76 | GTEx | Nerve Tibial | LA16c-OS12.2 | 0.18 | 0.10 | lasso | 5 | 0.09 | 3.8e-07 | 6.09 | 6.3 | 3.7e-10 | -0.05 | 1.00 | 0.00 | FALSE |
77 | GTEx | Pancreas | NPRL3 | 0.18 | 0.07 | enet | 14 | 0.15 | 9.6e-07 | -9.76 | 7.7 | 1.7e-14 | 0.33 | 0.21 | 0.07 | FALSE |
78 | GTEx | Pituitary | NPRL3 | 0.33 | 0.22 | lasso | 2 | 0.16 | 6.9e-05 | -9.76 | 8.5 | 1.4e-17 | 0.62 | 0.13 | 0.11 | FALSE |
79 | GTEx | Pituitary | DECR2 | 0.34 | 0.32 | enet | 33 | 0.14 | 2.5e-04 | 4.99 | 6.6 | 4.7e-11 | 0.08 | 0.62 | 0.05 | FALSE |
80 | GTEx | Prostate | NPRL3 | 0.26 | 0.13 | lasso | 7 | 0.10 | 2.3e-03 | -9.76 | 10.2 | 2.3e-24 | 0.57 | 0.05 | 0.32 | FALSE |
81 | GTEx | Prostate | NME4 | 0.24 | 0.05 | enet | 11 | 0.00 | 2.4e-01 | 3.79 | -5.2 | 2.6e-07 | -0.01 | 0.14 | 0.13 | FALSE |
82 | GTEx | Skin Not Sun Exposed Suprapubic | MRPL28 | 0.23 | 0.16 | lasso | 6 | 0.16 | 2.4e-09 | -5.75 | -5.5 | 3.9e-08 | 0.01 | 0.95 | 0.00 | FALSE |
83 | GTEx | Skin Not Sun Exposed Suprapubic | NPRL3 | 0.28 | 0.19 | enet | 18 | 0.24 | 4.2e-13 | -14.68 | 10.6 | 3.4e-26 | 0.56 | 0.93 | 0.07 | FALSE |
84 | GTEx | Skin Not Sun Exposed Suprapubic | LA16c-OS12.2 | 0.14 | 0.08 | enet | 32 | 0.06 | 5.2e-04 | 5.32 | 5.2 | 2.0e-07 | 0.17 | 0.30 | 0.08 | FALSE |
85 | GTEx | Skin Sun Exposed Lower leg | NPRL3 | 0.33 | 0.27 | lasso | 3 | 0.29 | 1.8e-24 | -9.76 | 10.9 | 8.3e-28 | 0.63 | 1.00 | 0.00 | FALSE |
86 | GTEx | Skin Sun Exposed Lower leg | NME4 | 0.09 | 0.08 | enet | 5 | 0.09 | 8.9e-08 | 5.77 | -6.0 | 2.3e-09 | -0.09 | 1.00 | 0.00 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | SNRNP25 | 0.49 | 0.13 | lasso | 5 | 0.23 | 1.2e-18 | -4.31 | -6.4 | 1.5e-10 | -0.29 | 1.00 | 0.00 | TRUE |
88 | GTEx | Skin Sun Exposed Lower leg | ITFG3 | 0.15 | 0.09 | enet | 24 | 0.11 | 2.8e-09 | -5.25 | 5.5 | 2.8e-08 | 0.08 | 0.98 | 0.00 | FALSE |
89 | GTEx | Skin Sun Exposed Lower leg | LA16c-OS12.2 | 0.23 | 0.17 | lasso | 6 | 0.16 | 5.4e-13 | 5.32 | 6.4 | 1.4e-10 | -0.05 | 1.00 | 0.00 | FALSE |
90 | GTEx | Small Intestine Terminal Ileum | NPRL3 | 0.26 | 0.29 | enet | 10 | 0.21 | 1.7e-05 | -14.68 | 15.5 | 2.1e-54 | 0.72 | 0.03 | 0.91 | FALSE |
91 | GTEx | Small Intestine Terminal Ileum | WFIKKN1 | 0.46 | 0.30 | enet | 12 | 0.25 | 2.1e-06 | 2.13 | 5.5 | 2.8e-08 | 0.26 | 0.59 | 0.19 | FALSE |
92 | GTEx | Spleen | NPRL3 | 0.36 | 0.06 | lasso | 3 | 0.04 | 3.6e-02 | -9.76 | 9.0 | 1.9e-19 | 0.58 | 0.05 | 0.13 | TRUE |
93 | GTEx | Stomach | NPRL3 | 0.48 | 0.26 | lasso | 2 | 0.30 | 6.6e-15 | -14.68 | 12.8 | 9.2e-38 | 0.72 | 0.90 | 0.10 | FALSE |
94 | GTEx | Testis | RGS11 | 0.33 | 0.04 | lasso | 10 | 0.08 | 2.8e-04 | -5.32 | -8.9 | 6.0e-19 | -0.30 | 0.10 | 0.31 | FALSE |
95 | GTEx | Testis | TMEM8A | 0.22 | 0.01 | enet | 14 | 0.07 | 6.7e-04 | -0.40 | 6.2 | 5.9e-10 | 0.26 | 0.21 | 0.37 | FALSE |
96 | GTEx | Thyroid | NPRL3 | 0.32 | 0.12 | enet | 16 | 0.16 | 6.7e-12 | -9.76 | 11.8 | 6.6e-32 | 0.56 | 1.00 | 0.00 | FALSE |
97 | GTEx | Thyroid | NME4 | 0.19 | 0.07 | lasso | 6 | 0.09 | 1.9e-07 | 5.77 | -6.0 | 1.5e-09 | -0.09 | 0.99 | 0.00 | FALSE |
98 | GTEx | Thyroid | LA16c-OS12.2 | 0.13 | 0.03 | lasso | 4 | 0.04 | 9.0e-04 | -12.50 | 10.9 | 1.6e-27 | 0.19 | 0.08 | 0.10 | FALSE |
99 | GTEx | Uterus | NPRL3 | 0.49 | 0.05 | enet | 33 | 0.17 | 2.8e-04 | -15.32 | 9.8 | 1.1e-22 | 0.48 | 0.05 | 0.11 | FALSE |
100 | GTEx | Whole Blood | NME4 | 0.12 | 0.03 | lasso | 5 | 0.04 | 3.0e-04 | 4.94 | 6.2 | 5.7e-10 | 0.05 | 0.58 | 0.02 | FALSE |
101 | GTEx | Whole Blood | ITFG3 | 0.07 | 0.04 | lasso | 5 | 0.03 | 1.6e-03 | -5.25 | 6.0 | 2.4e-09 | 0.17 | 0.26 | 0.09 | FALSE |
102 | METSIM | Adipose | ITFG3 | 0.11 | 0.03 | enet | 18 | 0.07 | 6.9e-11 | -5.25 | 7.8 | 8.9e-15 | 0.16 | 0.98 | 0.00 | FALSE |
103 | METSIM | Adipose | NPRL3 | 0.10 | 0.07 | enet | 20 | 0.11 | 1.0e-15 | -14.66 | 7.1 | 1.7e-12 | 0.28 | 1.00 | 0.00 | FALSE |
104 | METSIM | Adipose | POLR3K | 0.09 | 0.01 | bslmm | 231 | 0.03 | 6.7e-05 | -4.31 | -9.2 | 3.2e-20 | -0.33 | 0.16 | 0.07 | FALSE |
105 | ROSMAP | Brain Pre-frontal Cortex | SLC9A3R2 | 0.16 | 0.11 | lasso | 6 | 0.12 | 6.3e-15 | -7.93 | 7.6 | 2.2e-14 | -0.01 | 0.00 | 1.00 | TRUE |
106 | ROSMAP | Brain Pre-frontal Cortex | HBQ1 | 0.16 | 0.06 | blup | 281 | 0.09 | 1.9e-11 | -3.32 | 7.0 | 3.7e-12 | 0.26 | 1.00 | 0.00 | FALSE |
107 | ROSMAP | Brain Pre-frontal Cortex | NPRL3 | 0.48 | 0.40 | enet | 36 | 0.46 | 9.2e-66 | -9.76 | 12.6 | 3.8e-36 | 0.68 | 1.00 | 0.00 | FALSE |
108 | ROSMAP | Brain Pre-frontal Cortex | NME4 | 0.14 | 0.10 | blup | 359 | 0.14 | 1.1e-17 | 4.99 | -6.9 | 6.9e-12 | -0.26 | 1.00 | 0.00 | FALSE |
109 | ROSMAP | Brain Pre-frontal Cortex | PDIA2 | 0.15 | 0.07 | lasso | 8 | 0.10 | 5.2e-13 | -5.32 | -5.8 | 5.7e-09 | -0.15 | 1.00 | 0.00 | FALSE |
110 | ROSMAP | Brain Pre-frontal Cortex | WASIR2 | 0.26 | 0.06 | bslmm | 216 | 0.15 | 1.1e-18 | -3.44 | 6.3 | 2.1e-10 | 0.02 | 1.00 | 0.00 | TRUE |
111 | ROSMAP | Brain Pre-frontal Cortex | DECR2 | 0.19 | 0.19 | blup | 366 | 0.17 | 7.8e-22 | 4.99 | 8.1 | 7.5e-16 | 0.08 | 1.00 | 0.00 | FALSE |
112 | YFS | Blood | HBM | 0.04 | 0.01 | enet | 53 | 0.02 | 1.4e-06 | -0.48 | -7.9 | 3.2e-15 | -0.07 | 0.66 | 0.01 | FALSE |
113 | YFS | Blood | HBQ1 | 0.21 | 0.05 | enet | 78 | 0.09 | 4.0e-29 | -2.00 | 9.4 | 3.5e-21 | 0.36 | 1.00 | 0.00 | FALSE |
114 | YFS | Blood | ITFG3 | 0.16 | 0.08 | bslmm | 304 | 0.12 | 4.7e-36 | -5.25 | 5.3 | 1.2e-07 | 0.13 | 1.00 | 0.00 | FALSE |
115 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SNRNP25 | 0.09 | 0.02 | enet | 13 | 0.02 | 7.1e-06 | 16.22 | -8.9 | 3.5e-19 | -0.68 | 0.00 | 0.99 | FALSE |
116 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | RGS11 | 0.09 | 0.05 | enet | 8 | 0.05 | 1.5e-03 | 6.75 | -9.1 | 1.2e-19 | -0.27 | 0.04 | 0.15 | FALSE |
117 | The Cancer Genome Atlas | Colon Adenocarcinoma | MRPL28 | 0.14 | 0.02 | lasso | 2 | 0.05 | 8.3e-04 | -6.31 | -6.8 | 1.5e-11 | -0.07 | 0.19 | 0.04 | TRUE |
118 | The Cancer Genome Atlas | Colon Adenocarcinoma | NPRL3 | 0.24 | 0.06 | lasso | 3 | 0.07 | 6.9e-05 | -14.66 | 12.1 | 9.6e-34 | 0.61 | 0.15 | 0.69 | FALSE |
119 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | NME4 | 0.07 | 0.01 | blup | 45 | 0.03 | 2.3e-04 | -3.43 | 6.7 | 1.8e-11 | 0.10 | 0.06 | 0.25 | FALSE |
120 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | NPRL3 | 0.03 | 0.04 | enet | 1 | 0.04 | 6.3e-05 | -9.76 | 9.8 | 1.7e-22 | 0.66 | 0.10 | 0.36 | FALSE |
121 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | RGS11 | 0.07 | 0.02 | blup | 59 | 0.04 | 2.8e-05 | 0.95 | -6.5 | 1.1e-10 | -0.25 | 0.30 | 0.08 | TRUE |
122 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SNRNP25 | 0.06 | 0.00 | blup | 30 | 0.01 | 8.2e-03 | -4.31 | -10.7 | 1.2e-26 | -0.46 | 0.00 | 0.47 | FALSE |
123 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ITFG3 | 0.04 | 0.01 | blup | 65 | 0.01 | 1.3e-02 | -6.70 | 5.7 | 1.1e-08 | -0.01 | 0.06 | 0.34 | FALSE |
124 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NPRL3 | 0.13 | 0.09 | enet | 24 | 0.08 | 1.0e-09 | -15.32 | 9.4 | 5.3e-21 | 0.57 | 0.88 | 0.12 | FALSE |
125 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SNRNP25 | 0.06 | 0.03 | blup | 35 | 0.04 | 4.0e-03 | -1.63 | -7.8 | 6.8e-15 | -0.45 | 0.02 | 0.12 | FALSE |
126 | The Cancer Genome Atlas | Brain Lower Grade Glioma | DECR2 | 0.08 | 0.07 | enet | 9 | 0.09 | 5.9e-10 | 4.74 | 5.4 | 6.8e-08 | -0.01 | 1.00 | 0.00 | FALSE |
127 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LOC100134368 | 0.03 | 0.00 | enet | 5 | 0.01 | 2.8e-02 | -6.49 | -5.5 | 2.9e-08 | -0.05 | 0.01 | 0.74 | FALSE |
128 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | SNRNP25 | 0.08 | 0.05 | blup | 35 | 0.05 | 2.9e-03 | -3.65 | -9.4 | 7.1e-21 | -0.43 | 0.04 | 0.04 | FALSE |
129 | The Cancer Genome Atlas | Lung Adenocarcinoma | DECR2 | 0.10 | 0.12 | blup | 44 | 0.14 | 5.9e-16 | 4.91 | 5.8 | 5.8e-09 | 0.02 | 1.00 | 0.00 | FALSE |
130 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | DECR2 | 0.07 | 0.06 | enet | 10 | 0.06 | 3.8e-07 | 4.99 | 6.1 | 1.1e-09 | 0.04 | 0.98 | 0.01 | TRUE |
131 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | LOC100134368 | 0.04 | 0.01 | enet | 6 | 0.03 | 2.4e-04 | 5.77 | -7.2 | 7.5e-13 | -0.02 | 0.03 | 0.17 | FALSE |
132 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SNRNP25 | 0.08 | 0.01 | blup | 30 | 0.04 | 2.3e-05 | 16.63 | -9.1 | 9.1e-20 | -0.57 | 0.00 | 0.95 | FALSE |
133 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | TMEM8A | 0.07 | 0.03 | blup | 52 | 0.05 | 1.8e-04 | -1.93 | -5.8 | 7.9e-09 | -0.10 | 0.03 | 0.04 | FALSE |
134 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | NPRL3 | 0.18 | 0.18 | enet | 11 | 0.17 | 1.3e-07 | -9.76 | 10.6 | 2.3e-26 | 0.55 | 0.82 | 0.10 | FALSE |
135 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | LOC100134368 | 0.08 | 0.07 | blup | 48 | 0.06 | 1.9e-03 | 4.94 | -8.3 | 7.0e-17 | -0.07 | 0.05 | 0.26 | FALSE |
136 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | NME4 | 0.13 | 0.09 | blup | 45 | 0.08 | 4.2e-04 | 4.64 | -5.2 | 1.6e-07 | -0.10 | 0.21 | 0.05 | FALSE |
137 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | NPRL3 | 0.17 | 0.11 | lasso | 12 | 0.11 | 4.6e-05 | -14.66 | 13.8 | 1.4e-43 | 0.61 | 0.06 | 0.23 | FALSE |
138 | The Cancer Genome Atlas | Prostate Adenocarcinoma | LOC100134368 | 0.05 | 0.00 | blup | 48 | 0.04 | 2.5e-05 | -7.35 | -5.1 | 3.0e-07 | 0.03 | 0.01 | 0.92 | TRUE |
139 | The Cancer Genome Atlas | Prostate Adenocarcinoma | NPRL3 | 0.11 | 0.10 | blup | 60 | 0.10 | 6.8e-11 | -9.76 | 8.1 | 5.5e-16 | 0.35 | 1.00 | 0.00 | FALSE |
140 | The Cancer Genome Atlas | Soft Tissue Sarcoma | ITFG3 | 0.08 | 0.06 | lasso | 2 | 0.06 | 1.8e-04 | -15.20 | 14.3 | 3.0e-46 | 0.26 | 0.00 | 0.95 | FALSE |
141 | The Cancer Genome Atlas | Soft Tissue Sarcoma | NPRL3 | 0.08 | 0.01 | blup | 65 | 0.04 | 1.7e-03 | -9.76 | 8.2 | 2.2e-16 | 0.34 | 0.03 | 0.22 | FALSE |
142 | The Cancer Genome Atlas | Stomach Adenocarcinoma | NME4 | 0.08 | 0.00 | blup | 43 | 0.03 | 1.6e-03 | 4.64 | 5.3 | 8.6e-08 | 0.05 | 0.06 | 0.03 | FALSE |
143 | The Cancer Genome Atlas | Stomach Adenocarcinoma | SNRNP25 | 0.13 | 0.02 | lasso | 3 | 0.08 | 3.1e-06 | -4.67 | -6.7 | 1.8e-11 | -0.22 | 0.09 | 0.04 | TRUE |
144 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | DECR2 | 0.19 | 0.13 | blup | 44 | 0.11 | 8.7e-05 | 3.36 | 5.7 | 1.6e-08 | 0.00 | 0.45 | 0.05 | TRUE |
145 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | MPG | 0.12 | 0.00 | enet | 13 | 0.08 | 1.0e-03 | -10.68 | -10.0 | 1.3e-23 | -0.20 | 0.01 | 0.10 | FALSE |
146 | The Cancer Genome Atlas | Thyroid Carcinoma | DECR2 | 0.18 | 0.14 | enet | 15 | 0.21 | 3.2e-20 | 4.74 | 5.2 | 1.7e-07 | 0.02 | 1.00 | 0.00 | FALSE |
147 | The Cancer Genome Atlas | Thyroid Carcinoma | LOC100134368 | 0.06 | 0.05 | blup | 47 | 0.07 | 3.9e-07 | 4.94 | -7.6 | 2.4e-14 | -0.08 | 0.10 | 0.87 | FALSE |
148 | The Cancer Genome Atlas | Thyroid Carcinoma | NPRL3 | 0.12 | 0.12 | lasso | 7 | 0.12 | 1.6e-11 | -9.76 | 9.8 | 1.3e-22 | 0.60 | 1.00 | 0.00 | FALSE |
149 | The Cancer Genome Atlas | Thyroid Carcinoma | SLC9A3R2 | 0.06 | 0.03 | lasso | 5 | 0.03 | 3.7e-04 | -7.36 | 7.0 | 2.7e-12 | 0.00 | 0.01 | 0.96 | FALSE |