[Hub]/) : Traits : Sitting height : ← →

chr16:66,514,962-71,093,625

Best TWAS P=8.46e-24 · Best GWAS P=7.07e-37 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	CDH3	0.07	0.04	blup	326	0.04	1.7e-05	1.11	5.1	3.0e-07	0.01	0.38	0.33	TRUE
2	CommonMind	Brain Pre-frontal Cortex	COG4	0.19	0.23	enet	28	0.27	4.3e-33	-4.90	5.6	2.1e-08	-0.25	0.93	0.07	FALSE
3	CommonMind	Brain Pre-frontal Cortex	COG8	0.09	0.13	lasso	5	0.14	6.9e-17	-6.99	-6.9	4.5e-12	0.09	1.00	0.00	TRUE
4	CommonMind	Brain Pre-frontal Cortex	NIP7	0.04	0.04	lasso	3	0.05	8.2e-07	-6.99	5.7	1.5e-08	-0.06	0.48	0.02	FALSE
5	CommonMind	Brain Pre-frontal Cortex	NOB1	0.04	0.05	enet	12	0.04	7.2e-06	-4.32	5.9	3.7e-09	-0.43	0.97	0.00	FALSE
6	CommonMind	Brain Pre-frontal Cortex	PDF	0.05	0.06	lasso	2	0.05	1.4e-06	-6.99	7.0	1.8e-12	-0.09	0.99	0.00	FALSE
7	CommonMind	Brain Pre-frontal Cortex	TPPP3	0.04	0.03	blup	222	0.03	2.0e-04	-5.37	7.7	1.6e-14	-0.01	0.14	0.66	TRUE
8	CommonMind	Brain Pre-frontal Cortex	VPS4A	0.07	0.12	enet	8	0.13	2.3e-15	-6.31	-6.9	7.0e-12	0.08	1.00	0.00	FALSE
9	GTEx	Adipose Subcutaneous	NFAT5	0.09	0.02	enet	19	0.05	8.2e-05	1.14	-6.6	3.8e-11	0.38	0.17	0.20	TRUE
10	GTEx	Adipose Visceral Omentum	NIP7	0.06	0.04	lasso	2	0.03	1.3e-02	-6.88	6.9	5.3e-12	-0.09	0.28	0.04	FALSE
11	GTEx	Adipose Visceral Omentum	TERF2	0.09	0.03	lasso	4	0.04	3.7e-03	-7.17	6.7	1.8e-11	-0.06	0.33	0.03	FALSE
12	GTEx	Artery Aorta	COG8	0.08	0.00	lasso	4	0.01	9.9e-02	-5.25	7.3	2.9e-13	-0.11	0.46	0.02	FALSE
13	GTEx	Artery Aorta	PDF	0.07	0.09	enet	11	0.09	9.4e-06	-6.99	7.6	3.7e-14	-0.07	0.94	0.00	FALSE
14	GTEx	Artery Tibial	PDF	0.09	0.08	lasso	4	0.09	2.0e-07	-6.99	6.9	5.3e-12	-0.10	1.00	0.00	FALSE
15	GTEx	Brain Cerebellar Hemisphere	KIAA0895L	0.36	0.14	lasso	9	0.14	2.5e-04	-4.96	-5.1	3.0e-07	-0.01	0.28	0.27	FALSE
16	GTEx	Brain Cerebellum	KIAA0895L	0.47	0.06	enet	39	0.13	1.5e-04	-4.87	-7.1	1.1e-12	-0.04	0.15	0.62	FALSE
17	GTEx	Brain Cerebellum	RP11-296I10.3	0.20	0.03	enet	12	0.14	8.8e-05	-0.66	5.5	3.1e-08	-0.36	0.04	0.26	FALSE
18	GTEx	Brain Cortex	LRRC29	0.53	0.02	enet	20	0.12	3.2e-04	-6.38	-5.3	1.2e-07	-0.03	0.03	0.67	FALSE
19	GTEx	Breast Mammary Tissue	SNTB2	0.14	0.07	lasso	5	0.07	2.3e-04	-6.59	6.9	5.5e-12	-0.12	0.80	0.01	FALSE
20	GTEx	Breast Mammary Tissue	PDF	0.08	0.05	lasso	3	0.03	7.3e-03	-6.42	6.8	1.0e-11	-0.13	0.26	0.04	TRUE
21	GTEx	Breast Mammary Tissue (Male)	SNTB2	0.18	0.08	lasso	3	0.05	2.8e-02	-5.34	6.2	7.4e-10	-0.05	0.12	0.05	FALSE
22	GTEx	Breast Mammary Tissue (Male)	PDF	0.11	0.03	lasso	5	0.04	4.9e-02	-6.88	7.0	3.7e-12	-0.09	0.04	0.09	FALSE
23	GTEx	Breast Mammary Tissue (Female)	PDF	0.07	-0.01	lasso	2	0.00	3.0e-01	3.35	6.6	4.5e-11	-0.31	0.03	0.16	FALSE
24	GTEx	Cells Transformed fibroblasts	COG4	0.23	0.18	lasso	5	0.20	1.3e-14	-4.79	5.7	1.6e-08	-0.24	0.94	0.05	FALSE
25	GTEx	Cells Transformed fibroblasts	NIP7	0.06	0.06	lasso	2	0.06	5.3e-05	-6.31	6.5	6.3e-11	-0.08	0.76	0.01	FALSE
26	GTEx	Cells Transformed fibroblasts	PDF	0.05	0.06	lasso	1	0.05	2.5e-04	-6.99	7.0	2.7e-12	-0.09	0.57	0.02	FALSE
27	GTEx	Colon Transverse	TMED6	0.22	0.23	lasso	2	0.21	1.9e-10	5.79	-6.0	2.1e-09	0.14	1.00	0.00	FALSE
28	GTEx	Colon Transverse	PDF	0.20	0.05	enet	27	0.16	5.0e-08	-6.59	5.3	1.5e-07	-0.08	0.70	0.02	FALSE
29	GTEx	Esophagus Mucosa	COG4	0.14	0.06	lasso	4	0.08	7.8e-06	-4.90	5.1	2.7e-07	-0.22	0.83	0.07	FALSE
30	GTEx	Esophagus Mucosa	TERF2	0.05	0.05	lasso	3	0.05	5.3e-04	-6.92	6.9	4.4e-12	-0.12	0.32	0.03	FALSE
31	GTEx	Esophagus Mucosa	SNTB2	0.09	0.06	lasso	2	0.04	1.0e-03	-5.34	5.4	6.6e-08	-0.04	0.54	0.03	FALSE
32	GTEx	Esophagus Mucosa	PDF	0.05	0.01	lasso	3	0.01	1.3e-01	-6.62	6.8	1.1e-11	-0.10	0.32	0.03	FALSE
33	GTEx	Esophagus Muscularis	TMED6	0.08	0.04	enet	5	0.06	1.2e-04	-7.71	-8.0	1.4e-15	0.11	0.33	0.03	TRUE
34	GTEx	Esophagus Muscularis	COG8	0.06	0.05	lasso	3	0.04	2.1e-03	-6.88	6.9	4.8e-12	-0.08	0.46	0.02	FALSE
35	GTEx	Esophagus Muscularis	PDF	0.08	0.08	lasso	3	0.05	4.0e-04	-7.71	7.7	1.9e-14	-0.09	0.81	0.01	FALSE
36	GTEx	Liver	TMED6	0.37	0.22	lasso	7	0.24	1.9e-07	4.38	-6.8	7.3e-12	0.15	0.61	0.03	FALSE
37	GTEx	Lung	SNTB2	0.08	0.05	enet	12	0.04	2.8e-04	-6.42	7.8	4.1e-15	-0.25	0.60	0.15	TRUE
38	GTEx	Lung	PDF	0.04	0.02	enet	17	0.04	7.9e-04	-6.88	5.9	3.1e-09	-0.08	0.19	0.03	FALSE
39	GTEx	Muscle Skeletal	TANGO6	0.05	0.01	lasso	4	0.00	2.6e-01	-7.02	-7.7	1.6e-14	0.09	0.32	0.04	FALSE
40	GTEx	Nerve Tibial	PDF	0.07	0.03	lasso	2	0.02	2.2e-02	-6.38	6.4	1.7e-10	-0.13	0.30	0.11	FALSE
41	GTEx	Ovary	EXOSC6	0.32	-0.01	enet	34	0.09	2.7e-03	4.07	5.1	2.9e-07	-0.50	0.06	0.25	FALSE
42	GTEx	Pancreas	TMED6	0.73	0.64	lasso	11	0.63	1.9e-33	5.79	-5.8	4.9e-09	0.14	1.00	0.00	FALSE
43	GTEx	Pancreas	TPPP3	0.24	0.01	lasso	4	0.00	2.0e-01	-6.44	-6.5	9.2e-11	-0.03	0.01	0.83	FALSE
44	GTEx	Skin Not Sun Exposed Suprapubic	PDF	0.09	0.02	lasso	3	0.01	1.2e-01	-6.49	7.2	7.3e-13	-0.15	0.19	0.28	FALSE
45	GTEx	Skin Sun Exposed Lower leg	CYB5B	0.12	0.00	enet	18	0.02	5.4e-03	-0.18	-6.5	6.8e-11	0.48	0.32	0.40	FALSE
46	GTEx	Skin Sun Exposed Lower leg	SNTB2	0.10	0.09	lasso	6	0.07	9.7e-07	-6.42	6.2	4.8e-10	-0.06	0.99	0.00	FALSE
47	GTEx	Skin Sun Exposed Lower leg	PDF	0.05	0.05	enet	5	0.05	4.2e-05	-6.59	6.8	1.3e-11	-0.12	0.62	0.01	FALSE
48	GTEx	Spleen	TMED6	0.17	0.00	lasso	7	0.07	8.7e-03	-6.92	-5.4	8.2e-08	0.06	0.09	0.05	FALSE
49	GTEx	Stomach	TMED6	0.54	0.42	lasso	5	0.41	4.7e-21	5.79	-5.9	3.3e-09	0.16	1.00	0.00	FALSE
50	GTEx	Testis	TMED6	0.19	0.08	lasso	4	0.05	4.2e-03	4.55	-5.3	1.2e-07	0.16	0.32	0.04	FALSE
51	GTEx	Testis	WWP2	0.30	0.10	lasso	5	0.16	9.2e-08	-5.94	-9.1	8.6e-20	0.68	0.51	0.25	TRUE
52	GTEx	Thyroid	NIP7	0.11	0.12	lasso	4	0.13	2.9e-10	-6.88	7.2	7.0e-13	-0.10	1.00	0.00	FALSE
53	GTEx	Thyroid	TERF2	0.12	0.12	lasso	5	0.14	1.6e-10	-6.89	7.1	1.6e-12	-0.10	1.00	0.00	FALSE
54	GTEx	Thyroid	GFOD2	0.18	0.01	enet	16	0.02	1.1e-02	-0.72	-5.2	1.5e-07	-0.02	0.03	0.63	FALSE
55	GTEx	Thyroid	NOB1	0.03	0.01	enet	6	0.02	7.7e-03	-6.97	7.4	1.6e-13	-0.76	0.26	0.18	FALSE
56	GTEx	Thyroid	SNTB2	0.12	0.15	lasso	6	0.16	1.8e-12	-7.65	7.5	7.5e-14	-0.09	1.00	0.00	FALSE
57	GTEx	Thyroid	CTD-2033A16.3	0.03	0.02	enet	7	0.02	6.7e-03	-6.63	7.6	3.0e-14	-0.72	0.21	0.27	FALSE
58	METSIM	Adipose	NOB1	0.03	0.03	lasso	2	0.03	2.8e-05	-3.86	5.2	1.8e-07	-0.57	0.28	0.67	FALSE
59	YFS	Blood	SNTB2	0.10	0.09	blup	354	0.11	6.9e-34	-5.76	-5.3	1.4e-07	0.10	1.00	0.00	FALSE
60	YFS	Blood	TERF2	0.02	0.02	lasso	7	0.02	1.5e-07	-6.38	6.5	7.4e-11	-0.12	1.00	0.00	FALSE
61	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	PDF	0.03	0.02	blup	37	0.03	1.5e-03	-6.59	6.5	6.0e-11	-0.08	0.03	0.88	FALSE
62	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	TMED6	0.07	0.01	enet	4	0.04	3.7e-04	-6.49	-6.2	4.8e-10	0.08	0.02	0.89	FALSE
63	The Cancer Genome Atlas	Breast Invasive Carcinoma	KCTD19	0.02	0.02	blup	29	0.03	3.5e-06	-5.93	-6.1	8.3e-10	0.01	0.08	0.91	FALSE
64	The Cancer Genome Atlas	Breast Invasive Carcinoma	LRRC36	0.04	0.04	enet	8	0.05	5.8e-10	-5.93	-6.0	2.6e-09	0.03	0.10	0.90	FALSE
65	The Cancer Genome Atlas	Breast Invasive Carcinoma	NFAT5	0.02	0.01	enet	5	0.01	6.6e-04	-4.38	-9.2	2.1e-20	0.76	0.04	0.07	TRUE
66	The Cancer Genome Atlas	Breast Invasive Carcinoma	NIP7	0.01	0.01	lasso	3	0.01	2.2e-03	-7.17	7.0	3.0e-12	-0.09	0.01	0.96	FALSE
67	The Cancer Genome Atlas	Breast Invasive Carcinoma	NQO1	0.02	0.01	blup	39	0.01	4.3e-03	-7.04	-10.1	8.5e-24	0.73	0.04	0.51	TRUE
68	The Cancer Genome Atlas	Breast Invasive Carcinoma	PDF	0.05	0.03	enet	10	0.04	2.4e-08	-6.91	5.5	4.0e-08	-0.06	0.01	0.99	FALSE
69	The Cancer Genome Atlas	Breast Invasive Carcinoma	SLC9A5	0.01	0.00	blup	30	0.01	1.1e-02	-5.16	-5.1	2.8e-07	-0.05	0.02	0.45	FALSE
70	The Cancer Genome Atlas	Breast Invasive Carcinoma	SNTB2	0.02	0.02	lasso	3	0.01	1.0e-03	-6.44	6.0	1.6e-09	-0.06	0.11	0.78	FALSE
71	The Cancer Genome Atlas	Cervical Squamous Cell Carcinoma	PDXDC2	0.20	0.02	blup	26	0.07	1.8e-04	4.07	6.0	2.0e-09	-0.35	0.06	0.34	FALSE
72	The Cancer Genome Atlas	Colon Adenocarcinoma	NQO1	0.06	0.04	lasso	3	0.01	5.3e-02	-7.04	-7.0	3.7e-12	0.53	0.03	0.32	FALSE
73	The Cancer Genome Atlas	Colon Adenocarcinoma	PDF	0.07	0.09	blup	36	0.09	9.9e-06	-6.99	7.0	1.8e-12	-0.11	0.03	0.97	FALSE
74	The Cancer Genome Atlas	Colon Adenocarcinoma	TERF2	0.05	0.03	blup	46	0.02	1.9e-02	-6.42	5.4	6.9e-08	-0.09	0.02	0.68	FALSE
75	The Cancer Genome Atlas	Colon Adenocarcinoma	TMED6	0.37	0.29	lasso	4	0.28	3.1e-16	5.79	-6.2	7.2e-10	0.15	0.95	0.05	FALSE
76	The Cancer Genome Atlas	Esophageal Carcinoma	PDF	0.12	0.00	blup	37	0.05	1.2e-02	-6.88	6.6	4.2e-11	-0.10	0.01	0.78	FALSE
77	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	PDF	0.06	0.06	enet	13	0.06	1.6e-07	-6.91	7.3	2.8e-13	-0.15	0.02	0.98	FALSE
78	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	NIP7	0.02	0.02	lasso	2	0.01	2.4e-02	-6.59	6.9	6.4e-12	-0.12	0.02	0.74	FALSE
79	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	PDF	0.04	0.05	blup	37	0.06	3.6e-07	-6.59	7.3	2.8e-13	-0.12	0.02	0.98	FALSE
80	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	TMED6	0.47	0.31	lasso	3	0.37	3.6e-43	5.79	-6.0	2.3e-09	0.15	0.95	0.05	FALSE
81	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	NIP7	0.06	0.05	enet	6	0.04	3.4e-03	-6.33	6.6	4.1e-11	-0.12	0.04	0.42	FALSE
82	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	TMED6	0.31	0.19	lasso	4	0.20	1.5e-11	5.79	-5.8	5.3e-09	0.15	0.95	0.05	FALSE
83	The Cancer Genome Atlas	Brain Lower Grade Glioma	NIP7	0.05	0.05	blup	39	0.04	9.2e-06	-7.17	5.2	1.9e-07	-0.03	0.00	0.99	FALSE
84	The Cancer Genome Atlas	Brain Lower Grade Glioma	PDF	0.07	0.07	blup	37	0.08	2.8e-09	-7.17	6.5	7.3e-11	-0.09	0.00	1.00	FALSE
85	The Cancer Genome Atlas	Brain Lower Grade Glioma	TERF2	0.02	0.03	lasso	4	0.03	6.6e-04	-6.92	7.0	1.9e-12	-0.12	0.02	0.92	FALSE
86	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	TMED6	0.21	0.06	enet	11	0.14	2.5e-07	4.38	-6.3	3.3e-10	0.16	0.07	0.83	FALSE
87	The Cancer Genome Atlas	Lung Adenocarcinoma	COG4	0.03	0.00	blup	30	0.01	9.7e-03	-4.82	5.2	1.7e-07	-0.19	0.02	0.73	FALSE
88	The Cancer Genome Atlas	Lung Adenocarcinoma	PDF	0.03	0.02	enet	6	0.03	7.5e-05	-6.99	7.2	4.1e-13	-0.11	0.01	0.99	FALSE
89	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	PDF	0.06	0.07	lasso	5	0.07	3.5e-08	-6.88	7.0	2.3e-12	-0.10	0.01	0.99	FALSE
90	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	PDF	0.03	0.01	blup	37	0.02	2.1e-02	-6.31	6.8	9.8e-12	-0.09	0.02	0.66	FALSE
91	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	PDF	0.10	0.13	blup	37	0.12	1.1e-05	-6.88	6.6	5.1e-11	-0.07	0.01	0.98	FALSE
92	The Cancer Genome Atlas	Pheochromocytoma and Paraganglioma	COG4	0.11	0.04	lasso	3	0.06	2.3e-03	-4.79	5.5	3.4e-08	-0.23	0.02	0.92	FALSE
93	The Cancer Genome Atlas	Pheochromocytoma and Paraganglioma	PDF	0.14	0.09	lasso	2	0.08	6.4e-04	-6.99	6.9	5.5e-12	-0.09	0.01	0.94	FALSE
94	The Cancer Genome Atlas	Prostate Adenocarcinoma	FHOD1	0.08	0.08	lasso	10	0.09	2.4e-09	-5.16	-5.1	2.8e-07	-0.02	0.85	0.15	TRUE
95	The Cancer Genome Atlas	Prostate Adenocarcinoma	NIP7	0.03	0.03	lasso	2	0.03	8.9e-04	-6.99	6.9	4.7e-12	-0.11	0.02	0.92	FALSE
96	The Cancer Genome Atlas	Prostate Adenocarcinoma	NQO1	0.10	0.00	enet	21	0.02	6.8e-03	7.24	-5.2	2.5e-07	0.19	0.01	0.16	FALSE
97	The Cancer Genome Atlas	Prostate Adenocarcinoma	PDF	0.09	0.18	enet	11	0.20	2.3e-20	-6.88	7.1	1.2e-12	-0.11	0.02	0.98	FALSE
98	The Cancer Genome Atlas	Prostate Adenocarcinoma	TERF2	0.04	0.04	blup	47	0.03	2.6e-04	-6.41	7.0	2.3e-12	-0.10	0.06	0.92	FALSE
99	The Cancer Genome Atlas	Rectum Adenocarcinoma	PDF	0.14	0.07	blup	37	0.07	1.2e-02	-6.36	6.8	7.4e-12	-0.08	0.02	0.68	FALSE
100	The Cancer Genome Atlas	Rectum Adenocarcinoma	TMED6	0.55	0.07	enet	20	0.13	6.4e-04	5.79	-6.0	1.6e-09	0.12	0.01	0.44	FALSE
101	The Cancer Genome Atlas	Soft Tissue Sarcoma	PDF	0.13	0.09	blup	37	0.09	3.6e-06	-6.91	5.7	1.1e-08	-0.07	0.01	0.99	FALSE
102	The Cancer Genome Atlas	Skin Cutaneous Melanoma	COG4	0.26	-0.01	blup	30	0.02	1.1e-01	-3.26	6.9	6.9e-12	-0.27	0.01	0.48	FALSE
103	The Cancer Genome Atlas	Stomach Adenocarcinoma	PDF	0.04	0.04	blup	37	0.03	2.6e-03	-6.91	7.4	1.3e-13	-0.13	0.02	0.95	FALSE
104	The Cancer Genome Atlas	Stomach Adenocarcinoma	TMED6	0.18	0.14	enet	11	0.15	3.2e-11	5.79	-5.9	3.9e-09	0.13	0.66	0.34	FALSE
105	The Cancer Genome Atlas	Thyroid Carcinoma	C16orf48	0.04	0.02	blup	17	0.04	8.5e-05	-1.91	5.2	2.3e-07	-0.08	0.00	0.06	FALSE
106	The Cancer Genome Atlas	Thyroid Carcinoma	COG4	0.30	0.11	enet	15	0.12	3.1e-11	-4.90	5.7	1.1e-08	-0.20	0.02	0.98	FALSE
107	The Cancer Genome Atlas	Thyroid Carcinoma	NIP7	0.11	0.18	lasso	4	0.18	5.7e-17	-6.91	6.7	2.6e-11	-0.09	0.01	0.99	FALSE
108	The Cancer Genome Atlas	Thyroid Carcinoma	PDF	0.05	0.04	blup	36	0.04	9.8e-05	-7.03	7.0	1.9e-12	-0.12	0.01	0.98	FALSE
109	The Cancer Genome Atlas	Thyroid Carcinoma	SNTB2	0.05	0.01	blup	41	0.04	6.9e-05	0.95	5.5	3.8e-08	-0.05	0.06	0.71	FALSE
110	The Cancer Genome Atlas	Thyroid Carcinoma	TERF2	0.04	0.05	lasso	1	0.04	9.2e-05	-6.38	6.4	1.8e-10	-0.13	0.11	0.85	FALSE