Best TWAS P=1.72e-24 · Best GWAS P=2.65e-23 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | DTX2P1-UPK3BP1-PMS2P11 | 0.18 | 0.09 | enet | 21 | 0.12 | 6.1e-15 | 6.6 | 7.9 | 3.5e-15 | -0.10 | 0.00 | 1.00 | TRUE |
2 | CommonMind | Brain Pre-frontal Cortex | POM121C | 0.08 | 0.05 | lasso | 2 | 0.04 | 1.1e-05 | -9.9 | -9.8 | 1.1e-22 | 0.99 | 0.00 | 1.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | STAG3L1 | 0.23 | 0.14 | enet | 13 | 0.17 | 1.0e-19 | -9.9 | -9.2 | 3.9e-20 | 0.91 | 0.00 | 1.00 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | STAG3L2 | 0.33 | 0.09 | enet | 3 | 0.18 | 7.3e-21 | 2.9 | -5.4 | 5.4e-08 | 0.19 | 0.98 | 0.02 | FALSE |
5 | GTEx | Adipose Subcutaneous | PMS2P3 | 0.15 | 0.12 | lasso | 3 | 0.10 | 9.8e-09 | -9.1 | -9.4 | 5.1e-21 | 0.96 | 0.00 | 1.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | POM121C | 0.20 | 0.11 | enet | 18 | 0.12 | 1.2e-09 | -9.9 | -8.2 | 1.6e-16 | 0.80 | 0.00 | 1.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | STAG3L2 | 0.16 | 0.03 | enet | 11 | 0.09 | 1.0e-07 | 5.4 | -6.0 | 2.5e-09 | 0.22 | 0.22 | 0.74 | FALSE |
8 | GTEx | Adipose Subcutaneous | TRIM73 | 0.20 | 0.12 | enet | 26 | 0.12 | 2.0e-10 | -9.9 | -8.2 | 3.4e-16 | 0.82 | 0.00 | 1.00 | FALSE |
9 | GTEx | Adipose Subcutaneous | STAG3L1 | 0.30 | 0.24 | enet | 24 | 0.27 | 2.4e-22 | -9.9 | -9.8 | 1.5e-22 | 0.92 | 0.00 | 1.00 | FALSE |
10 | GTEx | Adipose Visceral Omentum | POM121C | 0.16 | 0.10 | lasso | 5 | 0.12 | 7.2e-07 | 6.1 | -7.8 | 7.9e-15 | 0.80 | 0.02 | 0.98 | FALSE |
11 | GTEx | Adipose Visceral Omentum | TRIM73 | 0.17 | 0.19 | lasso | 3 | 0.22 | 1.4e-11 | -9.1 | -8.1 | 6.2e-16 | 0.92 | 0.00 | 1.00 | FALSE |
12 | GTEx | Adipose Visceral Omentum | STAG3L1 | 0.20 | 0.19 | lasso | 3 | 0.17 | 2.3e-09 | -9.9 | -9.9 | 6.4e-23 | 1.00 | 0.00 | 1.00 | FALSE |
13 | GTEx | Adrenal Gland | STAG3L2 | 0.14 | 0.07 | enet | 3 | 0.11 | 1.2e-04 | 5.7 | -6.1 | 1.3e-09 | 0.13 | 0.03 | 0.70 | FALSE |
14 | GTEx | Artery Aorta | PMS2P5 | 0.33 | 0.10 | lasso | 6 | 0.17 | 1.3e-09 | 5.4 | -5.5 | 2.9e-08 | 0.17 | 0.48 | 0.49 | FALSE |
15 | GTEx | Artery Aorta | STAG3L2 | 0.18 | 0.18 | lasso | 6 | 0.16 | 3.0e-09 | 5.4 | -5.5 | 4.0e-08 | 0.13 | 0.51 | 0.49 | FALSE |
16 | GTEx | Artery Aorta | GSAP | 0.19 | 0.07 | lasso | 2 | 0.04 | 2.8e-03 | 5.3 | -5.9 | 3.1e-09 | -0.01 | 0.26 | 0.03 | TRUE |
17 | GTEx | Artery Aorta | STAG3L1 | 0.18 | 0.03 | lasso | 4 | 0.08 | 3.9e-05 | -9.9 | -9.7 | 2.1e-22 | 1.00 | 0.00 | 1.00 | FALSE |
18 | GTEx | Artery Coronary | PMS2P5 | 0.15 | -0.01 | enet | 13 | 0.08 | 1.4e-03 | 5.4 | -6.4 | 1.5e-10 | 0.20 | 0.01 | 0.72 | FALSE |
19 | GTEx | Artery Coronary | STAG3L2 | 0.16 | 0.10 | lasso | 3 | 0.11 | 1.5e-04 | 5.4 | -5.7 | 9.2e-09 | 0.11 | 0.03 | 0.83 | FALSE |
20 | GTEx | Artery Coronary | STAG3L1 | 0.28 | 0.13 | lasso | 4 | 0.17 | 1.8e-06 | -9.1 | -9.3 | 1.1e-20 | 0.86 | 0.01 | 0.99 | FALSE |
21 | GTEx | Artery Tibial | PMS2P5 | 0.21 | 0.08 | lasso | 5 | 0.07 | 1.9e-06 | 5.4 | -6.3 | 4.0e-10 | 0.17 | 0.09 | 0.83 | FALSE |
22 | GTEx | Artery Tibial | POM121C | 0.12 | 0.10 | lasso | 1 | 0.10 | 6.8e-08 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 1.00 | FALSE |
23 | GTEx | Artery Tibial | STAG3L2 | 0.26 | 0.12 | lasso | 4 | 0.12 | 1.7e-09 | 5.4 | -5.4 | 5.5e-08 | 0.18 | 0.53 | 0.46 | FALSE |
24 | GTEx | Artery Tibial | TRIM73 | 0.10 | 0.00 | lasso | 7 | 0.02 | 5.5e-03 | -9.9 | -6.8 | 1.1e-11 | 0.82 | 0.00 | 0.96 | TRUE |
25 | GTEx | Artery Tibial | STAG3L1 | 0.25 | 0.19 | lasso | 4 | 0.19 | 8.3e-15 | -9.9 | -10.0 | 2.0e-23 | 1.00 | 0.00 | 1.00 | FALSE |
26 | GTEx | Artery Tibial | FAM185BP | 0.11 | 0.02 | enet | 22 | 0.02 | 1.1e-02 | 6.1 | 6.3 | 3.5e-10 | -0.04 | 0.06 | 0.42 | FALSE |
27 | GTEx | Brain Cerebellar Hemisphere | POM121C | 0.33 | 0.32 | lasso | 3 | 0.30 | 1.4e-08 | -9.9 | -9.8 | 8.9e-23 | 1.00 | 0.00 | 1.00 | FALSE |
28 | GTEx | Brain Cerebellar Hemisphere | TRIM73 | 0.35 | 0.28 | enet | 25 | 0.25 | 3.6e-07 | -9.9 | -7.9 | 3.3e-15 | 0.84 | 0.00 | 1.00 | TRUE |
29 | GTEx | Brain Cerebellum | PMS2P5 | 0.62 | 0.08 | lasso | 6 | 0.22 | 3.3e-07 | 5.4 | -6.0 | 2.7e-09 | 0.13 | 0.04 | 0.74 | FALSE |
30 | GTEx | Brain Cerebellum | POM121C | 0.30 | 0.15 | lasso | 8 | 0.08 | 2.4e-03 | -9.9 | -8.8 | 2.1e-18 | 0.90 | 0.00 | 0.97 | FALSE |
31 | GTEx | Brain Cerebellum | TRIM73 | 0.24 | 0.06 | enet | 12 | 0.14 | 8.2e-05 | -9.1 | -6.7 | 2.2e-11 | 0.83 | 0.00 | 0.98 | FALSE |
32 | GTEx | Brain Cerebellum | GSAP | 0.38 | 0.30 | lasso | 4 | 0.31 | 6.4e-10 | 5.2 | -5.5 | 3.2e-08 | -0.03 | 0.92 | 0.01 | FALSE |
33 | GTEx | Brain Frontal Cortex BA9 | PMS2P5 | 0.53 | 0.18 | lasso | 7 | 0.28 | 4.0e-08 | 4.7 | -5.2 | 2.6e-07 | 0.05 | 0.04 | 0.45 | FALSE |
34 | GTEx | Brain Frontal Cortex BA9 | POM121C | 0.43 | 0.16 | enet | 24 | 0.17 | 3.4e-05 | -9.9 | -7.1 | 1.3e-12 | 0.81 | 0.00 | 0.98 | FALSE |
35 | GTEx | Brain Frontal Cortex BA9 | STAG3L2 | 0.28 | 0.07 | lasso | 4 | 0.11 | 9.7e-04 | 4.7 | -5.7 | 1.0e-08 | 0.11 | 0.03 | 0.52 | FALSE |
36 | GTEx | Brain Frontal Cortex BA9 | GSAP | 0.38 | 0.22 | lasso | 6 | 0.21 | 3.0e-06 | 5.2 | -5.8 | 6.0e-09 | -0.01 | 0.14 | 0.20 | TRUE |
37 | GTEx | Brain Hippocampus | PMS2P5 | 0.37 | 0.03 | enet | 12 | 0.05 | 2.9e-02 | 5.6 | -6.5 | 7.7e-11 | 0.13 | 0.01 | 0.48 | TRUE |
38 | GTEx | Brain Nucleus accumbens basal ganglia | PMS2P5 | 0.27 | 0.00 | enet | 20 | 0.03 | 6.6e-02 | 5.4 | -6.3 | 3.0e-10 | 0.18 | 0.02 | 0.32 | FALSE |
39 | GTEx | Brain Nucleus accumbens basal ganglia | POM121C | 0.33 | 0.27 | enet | 11 | 0.25 | 2.7e-07 | 6.1 | -6.4 | 1.3e-10 | 0.59 | 0.04 | 0.86 | FALSE |
40 | GTEx | Brain Nucleus accumbens basal ganglia | TRIM73 | 0.34 | 0.16 | enet | 11 | 0.29 | 1.5e-08 | 6.1 | -8.0 | 1.0e-15 | 0.82 | 0.00 | 1.00 | TRUE |
41 | GTEx | Brain Nucleus accumbens basal ganglia | STAG3L1 | 0.29 | 0.09 | enet | 13 | 0.18 | 1.9e-05 | -9.9 | -8.2 | 2.9e-16 | 0.79 | 0.00 | 0.97 | FALSE |
42 | GTEx | Brain Putamen basal ganglia | PMS2P3 | 0.37 | 0.13 | lasso | 6 | 0.18 | 6.0e-05 | -9.1 | -8.3 | 1.2e-16 | 0.73 | 0.01 | 0.85 | FALSE |
43 | GTEx | Breast Mammary Tissue | PMS2P3 | 0.19 | 0.14 | lasso | 4 | 0.19 | 3.5e-10 | -9.1 | -9.1 | 8.3e-20 | 0.88 | 0.00 | 1.00 | TRUE |
44 | GTEx | Breast Mammary Tissue | STAG3L2 | 0.14 | 0.08 | lasso | 2 | 0.11 | 4.0e-06 | 5.4 | -5.7 | 1.0e-08 | 0.10 | 0.21 | 0.72 | FALSE |
45 | GTEx | Breast Mammary Tissue | STAG3L1 | 0.16 | 0.15 | lasso | 2 | 0.14 | 8.7e-08 | -9.9 | -9.9 | 4.4e-23 | 0.98 | 0.00 | 1.00 | FALSE |
46 | GTEx | Breast Mammary Tissue (Female) | PMS2P3 | 0.31 | 0.05 | enet | 8 | 0.10 | 6.2e-04 | -9.1 | -7.5 | 7.1e-14 | 0.69 | 0.02 | 0.79 | FALSE |
47 | GTEx | Breast Mammary Tissue (Female) | POM121C | 0.17 | -0.01 | lasso | 3 | 0.02 | 6.3e-02 | -9.9 | -9.3 | 1.1e-20 | 0.90 | 0.01 | 0.63 | FALSE |
48 | GTEx | Breast Mammary Tissue (Female) | STAG3L1 | 0.04 | 0.12 | lasso | 1 | 0.04 | 2.9e-02 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 0.96 | FALSE |
49 | GTEx | Cells EBV-transformed lymphocytes | PMS2P5 | 0.16 | 0.06 | lasso | 3 | 0.04 | 1.7e-02 | 4.7 | -5.8 | 7.1e-09 | 0.11 | 0.01 | 0.77 | FALSE |
50 | GTEx | Cells EBV-transformed lymphocytes | STAG3L1 | 0.43 | 0.21 | enet | 21 | 0.23 | 3.8e-08 | -9.9 | -9.4 | 4.5e-21 | 0.86 | 0.00 | 1.00 | FALSE |
51 | GTEx | Cells Transformed fibroblasts | PMS2P5 | 0.31 | 0.16 | lasso | 5 | 0.18 | 2.1e-13 | 5.4 | -6.3 | 2.8e-10 | 0.15 | 0.44 | 0.56 | FALSE |
52 | GTEx | Cells Transformed fibroblasts | PMS2P3 | 0.23 | 0.15 | lasso | 6 | 0.15 | 1.4e-11 | -9.1 | -9.3 | 1.1e-20 | 0.94 | 0.00 | 1.00 | FALSE |
53 | GTEx | Cells Transformed fibroblasts | POM121C | 0.15 | 0.06 | lasso | 5 | 0.07 | 1.2e-05 | -9.9 | -9.9 | 3.4e-23 | 0.99 | 0.00 | 1.00 | FALSE |
54 | GTEx | Cells Transformed fibroblasts | STAG3L2 | 0.18 | 0.16 | lasso | 5 | 0.16 | 7.5e-12 | 5.4 | -5.7 | 9.8e-09 | 0.13 | 0.47 | 0.53 | FALSE |
55 | GTEx | Cells Transformed fibroblasts | STAG3L1 | 0.22 | 0.17 | lasso | 4 | 0.18 | 2.6e-13 | -9.9 | -10.0 | 2.4e-23 | 0.96 | 0.00 | 1.00 | FALSE |
56 | GTEx | Colon Sigmoid | STAG3L1 | 0.30 | 0.18 | lasso | 4 | 0.18 | 8.5e-07 | -9.9 | -9.7 | 4.5e-22 | 0.97 | 0.00 | 1.00 | FALSE |
57 | GTEx | Colon Transverse | STAG3L1 | 0.22 | 0.18 | lasso | 1 | 0.16 | 4.0e-08 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 1.00 | FALSE |
58 | GTEx | Esophagus Gastroesophageal Junction | PMS2P5 | 0.23 | 0.19 | lasso | 2 | 0.18 | 5.4e-07 | 4.7 | -5.3 | 1.0e-07 | 0.09 | 0.03 | 0.93 | FALSE |
59 | GTEx | Esophagus Gastroesophageal Junction | STAG3L1 | 0.36 | 0.16 | lasso | 5 | 0.16 | 1.7e-06 | -9.9 | -9.3 | 9.0e-21 | 0.93 | 0.00 | 1.00 | FALSE |
60 | GTEx | Esophagus Mucosa | PMS2P5 | 0.14 | 0.03 | lasso | 4 | 0.04 | 1.7e-03 | 4.7 | -6.1 | 1.2e-09 | 0.14 | 0.03 | 0.67 | FALSE |
61 | GTEx | Esophagus Mucosa | PMS2P3 | 0.14 | 0.15 | lasso | 2 | 0.14 | 9.7e-10 | -9.9 | -10.1 | 5.8e-24 | 1.00 | 0.00 | 1.00 | FALSE |
62 | GTEx | Esophagus Mucosa | POM121C | 0.13 | 0.10 | lasso | 1 | 0.07 | 1.0e-05 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 1.00 | FALSE |
63 | GTEx | Esophagus Mucosa | STAG3L2 | 0.23 | 0.16 | lasso | 3 | 0.16 | 1.0e-10 | 5.4 | -5.9 | 4.3e-09 | 0.13 | 0.52 | 0.48 | FALSE |
64 | GTEx | Esophagus Mucosa | STAG3L1 | 0.19 | 0.19 | lasso | 1 | 0.18 | 2.4e-12 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 1.00 | FALSE |
65 | GTEx | Esophagus Muscularis | PMS2P3 | 0.19 | 0.01 | enet | 42 | 0.06 | 2.1e-04 | 1.1 | -5.5 | 2.8e-08 | 0.27 | 0.03 | 0.40 | TRUE |
66 | GTEx | Esophagus Muscularis | STAG3L2 | 0.23 | 0.09 | enet | 33 | 0.15 | 1.9e-09 | 5.4 | -6.4 | 1.5e-10 | 0.26 | 0.02 | 0.98 | FALSE |
67 | GTEx | Esophagus Muscularis | TRIM73 | 0.12 | 0.07 | lasso | 2 | 0.05 | 3.5e-04 | -9.1 | -9.1 | 1.0e-19 | 0.96 | 0.00 | 0.98 | TRUE |
68 | GTEx | Esophagus Muscularis | STAG3L1 | 0.30 | 0.15 | lasso | 4 | 0.16 | 4.3e-10 | -9.9 | -9.3 | 1.1e-20 | 0.94 | 0.00 | 1.00 | TRUE |
69 | GTEx | Heart Atrial Appendage | STAG3L1 | 0.14 | 0.04 | enet | 12 | 0.04 | 5.0e-03 | -9.1 | -8.4 | 3.7e-17 | 0.76 | 0.00 | 0.95 | FALSE |
70 | GTEx | Heart Left Ventricle | POM121C | 0.13 | 0.12 | lasso | 1 | 0.09 | 2.2e-05 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 1.00 | FALSE |
71 | GTEx | Heart Left Ventricle | STAG3L2 | 0.20 | 0.12 | lasso | 3 | 0.09 | 1.9e-05 | 5.4 | -5.9 | 4.4e-09 | 0.15 | 0.12 | 0.71 | FALSE |
72 | GTEx | Lung | POM121C | 0.13 | 0.10 | lasso | 3 | 0.10 | 7.8e-08 | -9.9 | -9.9 | 2.5e-23 | 0.98 | 0.00 | 1.00 | FALSE |
73 | GTEx | Lung | STAG3L2 | 0.13 | 0.11 | enet | 11 | 0.09 | 1.4e-07 | 5.4 | -5.9 | 4.5e-09 | 0.15 | 0.33 | 0.66 | FALSE |
74 | GTEx | Lung | TRIM73 | 0.14 | 0.03 | enet | 8 | 0.06 | 2.9e-05 | -9.1 | -7.8 | 7.2e-15 | 0.79 | 0.00 | 0.99 | FALSE |
75 | GTEx | Lung | STAG3L1 | 0.28 | 0.12 | enet | 35 | 0.16 | 3.3e-12 | -9.9 | -8.7 | 4.4e-18 | 0.79 | 0.00 | 1.00 | FALSE |
76 | GTEx | Muscle Skeletal | PMS2P3 | 0.07 | 0.07 | lasso | 2 | 0.06 | 3.8e-06 | -9.9 | -9.9 | 2.6e-23 | 1.00 | 0.00 | 1.00 | FALSE |
77 | GTEx | Muscle Skeletal | STAG3L2 | 0.17 | 0.12 | lasso | 4 | 0.12 | 9.0e-12 | 5.4 | -5.8 | 6.3e-09 | 0.16 | 0.53 | 0.47 | FALSE |
78 | GTEx | Muscle Skeletal | TRIM73 | 0.08 | 0.05 | enet | 11 | 0.06 | 3.4e-06 | -9.9 | -9.6 | 5.7e-22 | 0.88 | 0.00 | 1.00 | FALSE |
79 | GTEx | Muscle Skeletal | GSAP | 0.20 | 0.12 | lasso | 2 | 0.12 | 1.8e-11 | 5.2 | -5.2 | 2.6e-07 | -0.01 | 1.00 | 0.00 | FALSE |
80 | GTEx | Muscle Skeletal | STAG3L1 | 0.16 | 0.10 | enet | 24 | 0.10 | 3.7e-10 | -9.9 | -8.7 | 4.9e-18 | 0.85 | 0.00 | 1.00 | FALSE |
81 | GTEx | Nerve Tibial | PMS2P5 | 0.16 | 0.04 | enet | 34 | 0.08 | 3.5e-06 | 5.4 | -6.5 | 9.7e-11 | 0.22 | 0.02 | 0.96 | FALSE |
82 | GTEx | Nerve Tibial | PMS2P3 | 0.29 | 0.13 | enet | 4 | 0.18 | 1.1e-12 | -9.1 | -8.8 | 1.1e-18 | 0.87 | 0.03 | 0.97 | TRUE |
83 | GTEx | Nerve Tibial | POM121C | 0.22 | 0.14 | lasso | 5 | 0.14 | 6.9e-10 | -9.9 | -9.7 | 3.5e-22 | 0.97 | 0.00 | 1.00 | FALSE |
84 | GTEx | Nerve Tibial | STAG3L2 | 0.36 | 0.09 | enet | 13 | 0.24 | 9.5e-17 | 5.4 | -6.9 | 4.0e-12 | 0.25 | 0.06 | 0.94 | FALSE |
85 | GTEx | Nerve Tibial | TRIM73 | 0.19 | 0.20 | enet | 6 | 0.20 | 6.3e-14 | -9.9 | -9.0 | 2.9e-19 | 0.96 | 0.00 | 1.00 | FALSE |
86 | GTEx | Nerve Tibial | GTF2IRD2 | 0.08 | 0.09 | lasso | 2 | 0.08 | 5.4e-06 | 5.4 | 5.7 | 1.6e-08 | -0.11 | 0.39 | 0.45 | FALSE |
87 | GTEx | Nerve Tibial | STAG3L1 | 0.37 | 0.21 | enet | 34 | 0.22 | 1.2e-15 | -9.9 | -7.7 | 1.6e-14 | 0.83 | 0.00 | 1.00 | TRUE |
88 | GTEx | Ovary | RHBDD2 | 0.55 | 0.00 | enet | 24 | 0.07 | 7.6e-03 | -9.1 | 6.8 | 1.4e-11 | -0.56 | 0.03 | 0.29 | FALSE |
89 | GTEx | Skin Not Sun Exposed Suprapubic | PMS2P3 | 0.26 | 0.19 | lasso | 3 | 0.17 | 1.3e-09 | -9.9 | -9.8 | 1.6e-22 | 0.99 | 0.00 | 1.00 | FALSE |
90 | GTEx | Skin Not Sun Exposed Suprapubic | STAG3L1 | 0.13 | 0.19 | lasso | 1 | 0.18 | 2.6e-10 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 1.00 | FALSE |
91 | GTEx | Skin Sun Exposed Lower leg | PMS2P3 | 0.38 | 0.30 | lasso | 3 | 0.29 | 1.9e-24 | -9.9 | -10.0 | 1.1e-23 | 1.00 | 0.00 | 1.00 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | STAG3L2 | 0.15 | 0.05 | enet | 8 | 0.08 | 2.8e-07 | 5.4 | -6.7 | 2.3e-11 | 0.24 | 0.21 | 0.54 | FALSE |
93 | GTEx | Skin Sun Exposed Lower leg | TRIM73 | 0.13 | 0.08 | enet | 10 | 0.14 | 1.6e-11 | -9.1 | -7.3 | 2.9e-13 | 0.85 | 0.01 | 0.99 | FALSE |
94 | GTEx | Skin Sun Exposed Lower leg | STAG3L1 | 0.27 | 0.15 | lasso | 5 | 0.15 | 1.3e-12 | -9.9 | -10.0 | 1.8e-23 | 0.98 | 0.00 | 1.00 | FALSE |
95 | GTEx | Stomach | PMS2P3 | 0.16 | 0.07 | lasso | 5 | 0.09 | 3.7e-05 | -9.1 | -9.4 | 3.5e-21 | 0.91 | 0.00 | 0.99 | FALSE |
96 | GTEx | Stomach | TRIM73 | 0.23 | 0.09 | lasso | 5 | 0.09 | 3.2e-05 | -9.9 | -9.5 | 2.0e-21 | 0.96 | 0.00 | 0.99 | FALSE |
97 | GTEx | Stomach | STAG3L1 | 0.35 | 0.20 | lasso | 5 | 0.18 | 4.2e-09 | -9.1 | -9.2 | 2.4e-20 | 0.86 | 0.01 | 0.99 | FALSE |
98 | GTEx | Testis | STAG3L2 | 0.26 | 0.13 | lasso | 4 | 0.22 | 4.0e-10 | 3.9 | -5.6 | 2.5e-08 | 0.07 | 0.21 | 0.79 | FALSE |
99 | GTEx | Testis | TRIM73 | 0.20 | 0.21 | lasso | 2 | 0.19 | 6.2e-09 | -9.9 | -9.9 | 5.4e-23 | 1.00 | 0.00 | 1.00 | FALSE |
100 | GTEx | Testis | STAG3L1 | 0.24 | 0.24 | enet | 14 | 0.27 | 1.4e-12 | -9.9 | -9.5 | 1.9e-21 | 0.88 | 0.00 | 1.00 | FALSE |
101 | GTEx | Testis | NSUN5P1 | 0.17 | 0.02 | enet | 10 | 0.05 | 4.2e-03 | 2.9 | -5.4 | 7.1e-08 | 0.69 | 0.01 | 0.76 | FALSE |
102 | GTEx | Thyroid | POM121C | 0.14 | 0.08 | lasso | 3 | 0.07 | 3.4e-06 | -9.9 | -9.5 | 1.5e-21 | 0.96 | 0.00 | 1.00 | FALSE |
103 | GTEx | Thyroid | STAG3L2 | 0.26 | 0.13 | enet | 20 | 0.16 | 1.4e-12 | 5.4 | -6.0 | 2.5e-09 | 0.24 | 0.52 | 0.48 | FALSE |
104 | GTEx | Thyroid | GTF2IRD2B | 0.03 | 0.04 | lasso | 1 | 0.03 | 1.9e-03 | 6.3 | 6.3 | 2.4e-10 | -0.17 | 0.01 | 0.88 | FALSE |
105 | GTEx | Thyroid | TRIM73 | 0.21 | 0.17 | lasso | 4 | 0.18 | 1.6e-13 | -9.9 | -9.0 | 2.3e-19 | 0.97 | 0.00 | 1.00 | FALSE |
106 | GTEx | Thyroid | GSAP | 0.19 | 0.08 | lasso | 3 | 0.07 | 3.3e-06 | 5.3 | -5.3 | 1.4e-07 | -0.03 | 0.89 | 0.01 | FALSE |
107 | GTEx | Thyroid | GTF2IRD2 | 0.08 | 0.07 | lasso | 1 | 0.04 | 2.4e-04 | 5.4 | 5.4 | 5.7e-08 | -0.12 | 0.13 | 0.21 | FALSE |
108 | GTEx | Thyroid | STAG3L1 | 0.36 | 0.24 | enet | 17 | 0.27 | 8.0e-21 | -9.9 | -9.2 | 4.2e-20 | 0.92 | 0.00 | 1.00 | FALSE |
109 | GTEx | Whole Blood | STAG3L1 | 0.08 | 0.06 | lasso | 3 | 0.07 | 2.8e-07 | -9.9 | -10.0 | 2.1e-23 | 1.00 | 0.00 | 1.00 | FALSE |
110 | METSIM | Adipose | NCF1 | 0.05 | 0.03 | blup | 130 | 0.04 | 3.9e-07 | 5.8 | 6.8 | 9.0e-12 | -0.22 | 0.03 | 0.97 | FALSE |
111 | METSIM | Adipose | POM121C | 0.11 | 0.08 | lasso | 1 | 0.08 | 1.6e-11 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 1.00 | FALSE |
112 | METSIM | Adipose | TRIM73 | 0.11 | 0.11 | lasso | 5 | 0.12 | 8.6e-18 | -9.1 | -8.9 | 6.3e-19 | 0.95 | 0.01 | 0.99 | FALSE |
113 | ROSMAP | Brain Pre-frontal Cortex | PMS2P3 | 0.05 | 0.04 | lasso | 1 | 0.03 | 4.6e-05 | -9.9 | -9.9 | 2.7e-23 | 1.00 | 0.00 | 1.00 | FALSE |
114 | ROSMAP | Brain Pre-frontal Cortex | POM121C | 0.36 | 0.26 | lasso | 7 | 0.27 | 2.8e-34 | -9.9 | -9.8 | 1.1e-22 | 0.99 | 0.00 | 1.00 | FALSE |
115 | ROSMAP | Brain Pre-frontal Cortex | PMS2P2 | 0.17 | 0.08 | enet | 8 | 0.08 | 6.0e-10 | -9.9 | -9.3 | 1.3e-20 | 0.90 | 0.00 | 1.00 | FALSE |
116 | ROSMAP | Brain Pre-frontal Cortex | WBSCR16 | 0.04 | 0.03 | lasso | 2 | 0.03 | 4.8e-05 | 5.7 | 5.6 | 1.7e-08 | -0.14 | 0.00 | 0.99 | FALSE |
117 | ROSMAP | Brain Pre-frontal Cortex | GSAP | 0.36 | 0.27 | lasso | 7 | 0.28 | 1.5e-35 | 5.2 | -5.3 | 1.3e-07 | -0.04 | 1.00 | 0.00 | TRUE |
118 | ROSMAP | Brain Pre-frontal Cortex | RSBN1L | 0.09 | 0.07 | enet | 42 | 0.08 | 9.9e-11 | -3.8 | -5.9 | 3.1e-09 | 0.04 | 0.65 | 0.31 | TRUE |
119 | ROSMAP | Brain Pre-frontal Cortex | STAG3L1 | 0.46 | 0.32 | lasso | 4 | 0.32 | 2.2e-42 | -9.9 | -9.9 | 2.9e-23 | 1.00 | 0.00 | 1.00 | FALSE |
120 | ROSMAP | Brain Pre-frontal Cortex | GTF2IP1 | 0.09 | 0.06 | lasso | 3 | 0.05 | 1.7e-07 | -9.9 | -9.9 | 2.8e-23 | 1.00 | 0.00 | 1.00 | FALSE |
121 | The Cancer Genome Atlas | Breast Invasive Carcinoma | POM121C | 0.04 | 0.04 | lasso | 2 | 0.03 | 1.2e-07 | -9.9 | -9.9 | 3.9e-23 | 1.00 | 0.00 | 1.00 | FALSE |
122 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PMS2L11 | 0.05 | 0.01 | blup | 6 | 0.03 | 1.1e-02 | -1.4 | 5.4 | 6.9e-08 | -0.03 | 0.00 | 0.67 | FALSE |
123 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PMS2L11 | 0.02 | 0.01 | blup | 6 | 0.02 | 9.7e-04 | -1.4 | 5.3 | 1.4e-07 | -0.03 | 0.00 | 0.70 | FALSE |
124 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | POM121C | 0.07 | 0.02 | enet | 3 | 0.04 | 5.8e-03 | -9.9 | -7.7 | 1.1e-14 | 0.85 | 0.00 | 0.67 | FALSE |
125 | The Cancer Genome Atlas | Thyroid Carcinoma | POM121C | 0.08 | 0.07 | lasso | 3 | 0.07 | 3.6e-07 | -9.9 | -9.8 | 6.8e-23 | 0.99 | 0.00 | 1.00 | FALSE |
126 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | PMS2L3 | 0.23 | 0.14 | lasso | 2 | 0.14 | 1.3e-04 | -9.9 | -10.2 | 1.7e-24 | 0.98 | 0.00 | 0.92 | TRUE |