Best TWAS P=1.23e-22 · Best GWAS P=7.33e-22 conditioned to 0
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | DIP2B | 0.11 | 0.10 | enet | 16 | 0.13 | 2.6e-15 | 9.12 | 8.9 | 4.6e-19 | 0.07 | 0.01 | 0.99 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | RHEBL1 | 0.03 | 0.01 | blup | 315 | 0.02 | 4.4e-03 | -6.76 | -5.3 | 1.3e-07 | 0.15 | 0.01 | 0.95 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | TMEM106C | 0.13 | 0.06 | enet | 21 | 0.11 | 3.2e-13 | 7.89 | 5.2 | 2.2e-07 | -0.05 | 0.82 | 0.18 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | TUBA1A | 0.08 | 0.06 | lasso | 4 | 0.06 | 1.8e-07 | -6.16 | 6.2 | 5.8e-10 | -0.05 | 0.59 | 0.41 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | TUBA1B | 0.08 | 0.06 | lasso | 7 | 0.06 | 4.6e-08 | -5.40 | 5.7 | 1.0e-08 | -0.04 | 0.73 | 0.27 | FALSE |
6 | CommonMind | Brain Pre-frontal Cortex | TUBA1C | 0.41 | 0.54 | lasso | 5 | 0.54 | 3.0e-77 | -5.71 | -5.7 | 1.3e-08 | 0.02 | 0.85 | 0.15 | FALSE |
7 | GTEx | Adipose Subcutaneous | ATF1 | 0.07 | 0.05 | enet | 14 | 0.04 | 3.1e-04 | -5.57 | -6.6 | 3.9e-11 | -0.03 | 0.63 | 0.33 | FALSE |
8 | GTEx | Adipose Subcutaneous | LMBR1L | 0.12 | 0.09 | lasso | 6 | 0.08 | 1.9e-07 | -6.32 | 5.9 | 4.1e-09 | -0.05 | 0.12 | 0.88 | FALSE |
9 | GTEx | Adipose Subcutaneous | ZNF641 | 0.10 | 0.10 | lasso | 4 | 0.10 | 2.8e-08 | 6.10 | 6.1 | 8.1e-10 | -0.06 | 0.98 | 0.02 | FALSE |
10 | GTEx | Adipose Subcutaneous | RP1-228P16.1 | 0.20 | 0.20 | lasso | 8 | 0.22 | 4.7e-18 | 6.62 | -7.8 | 4.4e-15 | 0.06 | 0.32 | 0.68 | FALSE |
11 | GTEx | Adipose Visceral Omentum | CERS5 | 0.10 | 0.01 | enet | 11 | 0.01 | 1.3e-01 | -6.44 | 6.4 | 2.0e-10 | -0.06 | 0.15 | 0.07 | FALSE |
12 | GTEx | Adipose Visceral Omentum | LMBR1L | 0.09 | 0.03 | lasso | 6 | 0.01 | 7.4e-02 | -6.50 | 6.3 | 3.2e-10 | -0.03 | 0.08 | 0.66 | FALSE |
13 | GTEx | Adipose Visceral Omentum | ZNF641 | 0.14 | 0.09 | lasso | 4 | 0.08 | 3.7e-05 | 6.17 | 7.1 | 9.0e-13 | -0.06 | 0.31 | 0.55 | FALSE |
14 | GTEx | Adipose Visceral Omentum | ASB8 | 0.10 | 0.00 | lasso | 6 | 0.00 | 6.8e-01 | 9.58 | 8.8 | 1.9e-18 | -0.09 | 0.02 | 0.95 | FALSE |
15 | GTEx | Adipose Visceral Omentum | RP1-228P16.1 | 0.18 | 0.13 | lasso | 4 | 0.15 | 2.3e-08 | 6.75 | -6.4 | 1.9e-10 | 0.03 | 0.53 | 0.47 | FALSE |
16 | GTEx | Adrenal Gland | DIP2B | 0.16 | 0.05 | lasso | 9 | 0.07 | 2.1e-03 | -5.70 | -5.4 | 7.0e-08 | -0.02 | 0.25 | 0.04 | FALSE |
17 | GTEx | Adrenal Gland | CCDC65 | 0.13 | 0.00 | enet | 26 | 0.01 | 1.8e-01 | 6.45 | -5.4 | 5.8e-08 | 0.05 | 0.10 | 0.41 | FALSE |
18 | GTEx | Adrenal Gland | ZNF641 | 0.31 | 0.18 | lasso | 3 | 0.21 | 4.2e-08 | 5.21 | 7.3 | 2.5e-13 | -0.04 | 0.16 | 0.80 | FALSE |
19 | GTEx | Adrenal Gland | RP1-228P16.1 | 0.19 | 0.20 | lasso | 5 | 0.15 | 4.4e-06 | 6.53 | -6.5 | 9.5e-11 | 0.04 | 0.17 | 0.82 | FALSE |
20 | GTEx | Artery Aorta | ATF1 | 0.26 | 0.29 | lasso | 2 | 0.28 | 1.5e-15 | -5.63 | -5.8 | 8.1e-09 | -0.04 | 1.00 | 0.00 | FALSE |
21 | GTEx | Artery Aorta | ZNF641 | 0.22 | 0.13 | enet | 30 | 0.18 | 4.9e-10 | 6.36 | 5.7 | 1.5e-08 | -0.04 | 0.96 | 0.04 | FALSE |
22 | GTEx | Artery Aorta | RP11-302B13.1 | 0.16 | 0.04 | enet | 13 | 0.08 | 2.9e-05 | -1.05 | 5.4 | 5.1e-08 | -0.02 | 0.16 | 0.62 | FALSE |
23 | GTEx | Artery Aorta | RP1-228P16.1 | 0.16 | 0.05 | enet | 28 | 0.11 | 1.7e-06 | 6.36 | -5.7 | 1.1e-08 | 0.05 | 0.74 | 0.25 | FALSE |
24 | GTEx | Artery Aorta | RP11-302B13.5 | 0.13 | 0.07 | lasso | 6 | 0.06 | 2.0e-04 | -5.69 | 6.1 | 1.1e-09 | -0.03 | 0.11 | 0.70 | FALSE |
25 | GTEx | Artery Coronary | ATF1 | 0.20 | 0.09 | lasso | 4 | 0.05 | 1.2e-02 | -5.57 | -5.9 | 4.2e-09 | -0.03 | 0.24 | 0.11 | FALSE |
26 | GTEx | Artery Coronary | RP1-228P16.1 | 0.12 | 0.06 | lasso | 2 | 0.03 | 2.6e-02 | 6.58 | -6.6 | 3.8e-11 | 0.05 | 0.21 | 0.60 | FALSE |
27 | GTEx | Artery Tibial | ATF1 | 0.24 | 0.26 | lasso | 7 | 0.25 | 2.7e-19 | -5.62 | -5.7 | 1.5e-08 | -0.03 | 1.00 | 0.00 | FALSE |
28 | GTEx | Artery Tibial | CCDC65 | 0.14 | 0.08 | enet | 39 | 0.11 | 7.9e-09 | -6.13 | -5.5 | 3.6e-08 | 0.08 | 0.57 | 0.42 | FALSE |
29 | GTEx | Artery Tibial | LMBR1L | 0.07 | 0.04 | enet | 13 | 0.03 | 1.7e-03 | -6.38 | 5.9 | 3.0e-09 | -0.02 | 0.24 | 0.72 | FALSE |
30 | GTEx | Artery Tibial | ZNF641 | 0.19 | 0.16 | lasso | 5 | 0.16 | 1.6e-12 | 6.17 | 6.5 | 1.1e-10 | -0.06 | 0.97 | 0.03 | FALSE |
31 | GTEx | Artery Tibial | RP1-228P16.1 | 0.16 | 0.14 | lasso | 14 | 0.15 | 5.9e-12 | 6.59 | -7.0 | 2.6e-12 | 0.06 | 0.97 | 0.03 | FALSE |
32 | GTEx | Artery Tibial | RP4-605O3.4 | 0.04 | 0.01 | lasso | 4 | 0.00 | 3.2e-01 | 7.93 | 7.7 | 1.7e-14 | 0.00 | 0.24 | 0.04 | FALSE |
33 | GTEx | Brain Caudate basal ganglia | LIMA1 | 0.18 | 0.12 | lasso | 5 | 0.07 | 3.9e-03 | 7.78 | 7.3 | 3.1e-13 | -0.01 | 0.14 | 0.12 | FALSE |
34 | GTEx | Brain Caudate basal ganglia | ASB8 | 0.18 | 0.02 | lasso | 4 | 0.04 | 2.1e-02 | 6.88 | 6.2 | 6.1e-10 | -0.03 | 0.10 | 0.27 | TRUE |
35 | GTEx | Brain Caudate basal ganglia | RP1-228P16.1 | 0.14 | 0.12 | lasso | 4 | 0.11 | 5.7e-04 | 6.75 | -6.7 | 2.6e-11 | 0.04 | 0.09 | 0.69 | FALSE |
36 | GTEx | Brain Cerebellar Hemisphere | RP1-228P16.1 | 0.30 | 0.21 | lasso | 7 | 0.28 | 6.5e-08 | 6.62 | -6.7 | 1.5e-11 | 0.04 | 0.57 | 0.41 | FALSE |
37 | GTEx | Brain Cerebellar Hemisphere | RP4-605O3.4 | 0.18 | 0.12 | enet | 14 | 0.10 | 1.5e-03 | 8.11 | 7.2 | 7.2e-13 | 0.08 | 0.14 | 0.11 | FALSE |
38 | GTEx | Brain Cerebellum | CERS5 | 0.53 | 0.65 | enet | 19 | 0.65 | 6.0e-25 | -4.76 | 5.2 | 2.4e-07 | 0.02 | 1.00 | 0.00 | TRUE |
39 | GTEx | Brain Cerebellum | LMBR1L | 0.18 | 0.15 | lasso | 1 | 0.12 | 1.9e-04 | -6.32 | 6.3 | 2.5e-10 | -0.02 | 0.05 | 0.82 | FALSE |
40 | GTEx | Brain Cortex | TMEM106C | 0.21 | 0.04 | enet | 20 | 0.10 | 1.0e-03 | 6.62 | 5.9 | 3.4e-09 | -0.02 | 0.04 | 0.79 | FALSE |
41 | GTEx | Brain Cortex | CERS5 | 0.26 | 0.09 | enet | 30 | 0.11 | 5.9e-04 | -4.27 | 6.4 | 1.7e-10 | -0.28 | 0.28 | 0.05 | FALSE |
42 | GTEx | Brain Cortex | ASB8 | 0.28 | 0.19 | lasso | 7 | 0.20 | 3.3e-06 | 6.88 | 7.4 | 1.9e-13 | -0.05 | 0.43 | 0.39 | FALSE |
43 | GTEx | Brain Frontal Cortex BA9 | TMEM106C | 0.35 | 0.01 | lasso | 8 | -0.01 | 6.8e-01 | -5.51 | 9.5 | 2.5e-21 | -0.06 | 0.03 | 0.73 | TRUE |
44 | GTEx | Brain Frontal Cortex BA9 | ASB8 | 0.24 | 0.16 | lasso | 6 | 0.07 | 7.1e-03 | 6.88 | 6.9 | 3.9e-12 | -0.04 | 0.30 | 0.19 | FALSE |
45 | GTEx | Brain Hippocampus | CERS5 | 0.31 | 0.21 | lasso | 4 | 0.22 | 5.9e-06 | -5.22 | 6.1 | 1.1e-09 | -0.13 | 0.33 | 0.08 | FALSE |
46 | GTEx | Brain Hippocampus | RP4-605O3.4 | 0.21 | 0.04 | lasso | 18 | 0.05 | 3.3e-02 | -1.94 | 5.1 | 2.8e-07 | 0.05 | 0.09 | 0.09 | FALSE |
47 | GTEx | Brain Nucleus accumbens basal ganglia | ASB8 | 0.20 | 0.04 | lasso | 4 | 0.02 | 7.7e-02 | 6.07 | 5.9 | 4.6e-09 | -0.01 | 0.11 | 0.28 | FALSE |
48 | GTEx | Brain Putamen basal ganglia | CERS5 | 0.29 | 0.12 | enet | 36 | 0.21 | 1.2e-05 | 7.96 | 7.4 | 1.9e-13 | -0.01 | 0.49 | 0.04 | FALSE |
49 | GTEx | Brain Putamen basal ganglia | RP1-228P16.1 | 0.21 | 0.24 | lasso | 6 | 0.24 | 2.1e-06 | 6.17 | -6.8 | 9.0e-12 | 0.06 | 0.16 | 0.70 | FALSE |
50 | GTEx | Breast Mammary Tissue | ATF1 | 0.07 | 0.07 | lasso | 5 | 0.04 | 2.9e-03 | -5.86 | -5.9 | 4.0e-09 | -0.01 | 0.16 | 0.13 | FALSE |
51 | GTEx | Breast Mammary Tissue | CERS5 | 0.05 | 0.06 | lasso | 2 | 0.04 | 6.1e-03 | -5.22 | 5.3 | 1.3e-07 | -0.02 | 0.29 | 0.04 | FALSE |
52 | GTEx | Breast Mammary Tissue | RP1-228P16.1 | 0.22 | 0.14 | lasso | 8 | 0.20 | 1.3e-10 | 4.67 | -5.9 | 4.1e-09 | 0.05 | 0.81 | 0.19 | FALSE |
53 | GTEx | Breast Mammary Tissue (Male) | RP1-228P16.1 | 0.13 | 0.00 | lasso | 6 | 0.01 | 1.8e-01 | 4.90 | -6.0 | 2.5e-09 | 0.05 | 0.06 | 0.38 | FALSE |
54 | GTEx | Breast Mammary Tissue (Female) | ATF1 | 0.04 | 0.03 | enet | 7 | 0.00 | 2.7e-01 | -5.86 | -6.3 | 2.6e-10 | 0.00 | 0.04 | 0.24 | FALSE |
55 | GTEx | Breast Mammary Tissue (Female) | CERS5 | 0.09 | 0.03 | lasso | 3 | 0.05 | 1.8e-02 | -5.22 | 9.8 | 1.2e-22 | -0.53 | 0.05 | 0.24 | TRUE |
56 | GTEx | Breast Mammary Tissue (Female) | RP1-228P16.1 | 0.07 | -0.01 | enet | 2 | -0.01 | 5.9e-01 | 6.62 | -6.4 | 1.5e-10 | 0.03 | 0.05 | 0.32 | FALSE |
57 | GTEx | Cells EBV-transformed lymphocytes | RP1-228P16.1 | 0.33 | 0.20 | lasso | 9 | 0.29 | 6.3e-10 | 6.01 | -8.4 | 4.3e-17 | 0.08 | 0.01 | 0.99 | TRUE |
58 | GTEx | Cells Transformed fibroblasts | LIMA1 | 0.17 | 0.01 | lasso | 6 | 0.02 | 8.8e-03 | -3.43 | -6.8 | 7.9e-12 | 0.21 | 0.14 | 0.08 | FALSE |
59 | GTEx | Cells Transformed fibroblasts | DIP2B | 0.16 | 0.08 | lasso | 3 | 0.08 | 6.2e-07 | -6.10 | -6.5 | 7.4e-11 | 0.00 | 0.93 | 0.01 | FALSE |
60 | GTEx | Cells Transformed fibroblasts | SMARCD1 | 0.08 | 0.07 | enet | 5 | 0.07 | 9.3e-06 | 7.45 | -7.7 | 1.8e-14 | 0.01 | 0.99 | 0.00 | FALSE |
61 | GTEx | Cells Transformed fibroblasts | RP1-228P16.1 | 0.09 | 0.03 | lasso | 3 | 0.04 | 8.1e-04 | 6.01 | -5.9 | 3.2e-09 | 0.06 | 0.27 | 0.64 | FALSE |
62 | GTEx | Colon Sigmoid | RP1-228P16.1 | 0.16 | 0.18 | lasso | 6 | 0.13 | 2.6e-05 | 4.67 | -5.4 | 5.9e-08 | 0.02 | 0.44 | 0.19 | FALSE |
63 | GTEx | Colon Transverse | RP1-228P16.1 | 0.24 | 0.18 | lasso | 5 | 0.18 | 4.9e-09 | 6.76 | -6.5 | 6.2e-11 | 0.04 | 0.74 | 0.25 | FALSE |
64 | GTEx | Esophagus Gastroesophageal Junction | ATF1 | 0.15 | 0.15 | lasso | 4 | 0.14 | 7.8e-06 | -6.08 | -6.4 | 2.1e-10 | -0.05 | 0.61 | 0.13 | FALSE |
65 | GTEx | Esophagus Gastroesophageal Junction | RP1-228P16.1 | 0.23 | 0.25 | enet | 17 | 0.23 | 6.8e-09 | 6.75 | -7.1 | 1.0e-12 | 0.06 | 0.77 | 0.22 | FALSE |
66 | GTEx | Esophagus Mucosa | TUBA1B | 0.08 | 0.02 | enet | 24 | 0.04 | 1.1e-03 | -5.81 | 5.5 | 3.7e-08 | 0.05 | 0.17 | 0.22 | FALSE |
67 | GTEx | Esophagus Mucosa | LMBR1L | 0.07 | 0.03 | lasso | 5 | 0.04 | 1.8e-03 | -6.64 | 7.4 | 1.9e-13 | -0.09 | 0.03 | 0.93 | FALSE |
68 | GTEx | Esophagus Mucosa | ZNF641 | 0.08 | 0.00 | enet | 23 | 0.01 | 1.0e-01 | 6.17 | 5.2 | 1.6e-07 | -0.02 | 0.10 | 0.80 | FALSE |
69 | GTEx | Esophagus Mucosa | RP1-228P16.1 | 0.19 | 0.18 | lasso | 4 | 0.21 | 8.7e-14 | 6.75 | -6.8 | 1.5e-11 | 0.04 | 1.00 | 0.00 | FALSE |
70 | GTEx | Esophagus Mucosa | RP11-386G11.10 | 0.10 | 0.02 | enet | 23 | 0.05 | 2.0e-04 | -5.81 | 5.7 | 9.8e-09 | 0.05 | 0.36 | 0.28 | FALSE |
71 | GTEx | Esophagus Muscularis | ATF1 | 0.15 | 0.17 | lasso | 2 | 0.16 | 7.5e-10 | -5.63 | -5.9 | 4.7e-09 | -0.04 | 0.99 | 0.01 | FALSE |
72 | GTEx | Esophagus Muscularis | TUBA1B | 0.08 | 0.04 | lasso | 7 | 0.06 | 1.9e-04 | -5.40 | 5.6 | 2.0e-08 | -0.05 | 0.28 | 0.31 | FALSE |
73 | GTEx | Esophagus Muscularis | CERS5 | 0.15 | 0.07 | enet | 18 | 0.09 | 2.7e-06 | -6.45 | 7.0 | 1.9e-12 | -0.03 | 0.98 | 0.01 | FALSE |
74 | GTEx | Esophagus Muscularis | RP1-228P16.1 | 0.20 | 0.17 | enet | 14 | 0.17 | 1.2e-10 | 6.75 | -6.4 | 2.1e-10 | 0.07 | 0.22 | 0.78 | FALSE |
75 | GTEx | Esophagus Muscularis | RP11-386G11.10 | 0.10 | 0.11 | lasso | 7 | 0.10 | 1.0e-06 | -5.40 | 5.6 | 2.6e-08 | -0.04 | 0.54 | 0.40 | FALSE |
76 | GTEx | Heart Atrial Appendage | CERS5 | 0.14 | 0.03 | lasso | 6 | 0.02 | 4.2e-02 | 8.11 | 7.9 | 3.1e-15 | -0.02 | 0.55 | 0.05 | FALSE |
77 | GTEx | Heart Atrial Appendage | RP1-228P16.1 | 0.16 | 0.02 | enet | 14 | 0.02 | 3.2e-02 | 4.90 | -5.9 | 4.3e-09 | 0.03 | 0.21 | 0.35 | FALSE |
78 | GTEx | Heart Left Ventricle | RP1-228P16.1 | 0.26 | 0.14 | lasso | 16 | 0.17 | 1.9e-09 | 6.76 | -8.0 | 1.1e-15 | 0.09 | 0.02 | 0.98 | TRUE |
79 | GTEx | Liver | RP1-228P16.1 | 0.19 | 0.08 | lasso | 7 | 0.06 | 7.1e-03 | 8.00 | -8.9 | 5.6e-19 | 0.09 | 0.05 | 0.79 | TRUE |
80 | GTEx | Lung | LMBR1L | 0.05 | 0.02 | lasso | 2 | 0.00 | 1.5e-01 | -6.64 | 7.1 | 1.5e-12 | -0.07 | 0.04 | 0.79 | FALSE |
81 | GTEx | Lung | ZNF641 | 0.08 | 0.10 | lasso | 2 | 0.08 | 8.0e-07 | 6.21 | 6.2 | 5.7e-10 | -0.05 | 0.97 | 0.03 | FALSE |
82 | GTEx | Lung | RP1-228P16.1 | 0.18 | 0.20 | enet | 21 | 0.21 | 7.0e-16 | 6.07 | -6.6 | 5.7e-11 | 0.05 | 0.99 | 0.01 | FALSE |
83 | GTEx | Muscle Skeletal | DIP2B | 0.03 | 0.04 | lasso | 6 | 0.04 | 1.1e-04 | -5.62 | -5.9 | 2.7e-09 | -0.04 | 0.88 | 0.02 | FALSE |
84 | GTEx | Muscle Skeletal | ATF1 | 0.09 | 0.06 | lasso | 5 | 0.07 | 5.0e-07 | -5.63 | -6.6 | 2.9e-11 | -0.04 | 0.78 | 0.22 | FALSE |
85 | GTEx | Muscle Skeletal | COX14 | 0.05 | 0.03 | lasso | 11 | 0.02 | 5.7e-03 | -4.76 | -6.6 | 3.8e-11 | 0.04 | 0.84 | 0.04 | FALSE |
86 | GTEx | Muscle Skeletal | RP1-228P16.1 | 0.12 | 0.10 | lasso | 9 | 0.09 | 7.4e-09 | 6.75 | -7.5 | 4.4e-14 | 0.06 | 0.41 | 0.59 | FALSE |
87 | GTEx | Muscle Skeletal | RP11-386G11.5 | 0.09 | 0.07 | enet | 17 | 0.08 | 7.4e-08 | -6.30 | 6.0 | 2.4e-09 | -0.11 | 0.09 | 0.91 | FALSE |
88 | GTEx | Nerve Tibial | CERS5 | 0.31 | 0.28 | enet | 20 | 0.36 | 2.2e-26 | 8.11 | 8.0 | 1.5e-15 | 0.01 | 1.00 | 0.00 | FALSE |
89 | GTEx | Nerve Tibial | LMBR1L | 0.08 | 0.04 | lasso | 4 | 0.06 | 3.1e-05 | -6.19 | 6.8 | 1.3e-11 | -0.05 | 0.15 | 0.81 | FALSE |
90 | GTEx | Nerve Tibial | ZNF641 | 0.14 | 0.11 | lasso | 4 | 0.08 | 2.3e-06 | 6.17 | 6.2 | 4.8e-10 | -0.07 | 0.88 | 0.12 | FALSE |
91 | GTEx | Nerve Tibial | ASB8 | 0.09 | 0.08 | lasso | 4 | 0.07 | 1.8e-05 | 6.59 | 6.6 | 4.2e-11 | -0.04 | 0.31 | 0.62 | FALSE |
92 | GTEx | Nerve Tibial | RP1-228P16.1 | 0.18 | 0.21 | enet | 22 | 0.21 | 4.9e-15 | 6.62 | -7.4 | 2.0e-13 | 0.07 | 0.72 | 0.28 | FALSE |
93 | GTEx | Nerve Tibial | RP11-386G11.10 | 0.07 | 0.05 | lasso | 2 | 0.03 | 1.8e-03 | -6.32 | 6.3 | 2.6e-10 | -0.02 | 0.12 | 0.75 | FALSE |
94 | GTEx | Nerve Tibial | RP4-605O3.4 | 0.11 | 0.00 | lasso | 3 | 0.00 | 1.7e-01 | 7.93 | 6.9 | 4.9e-12 | 0.00 | 0.16 | 0.05 | FALSE |
95 | GTEx | Ovary | CERS5 | 0.22 | 0.02 | lasso | 4 | 0.03 | 7.9e-02 | -5.22 | 5.2 | 1.7e-07 | -0.02 | 0.11 | 0.05 | FALSE |
96 | GTEx | Pancreas | RP1-228P16.1 | 0.12 | 0.05 | enet | 10 | 0.05 | 5.0e-03 | 4.66 | -7.2 | 8.2e-13 | 0.09 | 0.08 | 0.82 | FALSE |
97 | GTEx | Pituitary | RP1-228P16.1 | 0.20 | 0.15 | lasso | 6 | 0.16 | 1.1e-04 | 6.75 | -6.9 | 5.3e-12 | 0.04 | 0.21 | 0.51 | FALSE |
98 | GTEx | Pituitary | RP11-386G11.10 | 0.19 | 0.11 | lasso | 5 | 0.10 | 1.4e-03 | -5.41 | 6.5 | 8.0e-11 | -0.09 | 0.06 | 0.58 | FALSE |
99 | GTEx | Prostate | CERS5 | 0.19 | 0.08 | lasso | 4 | 0.02 | 1.2e-01 | 7.92 | 8.4 | 3.8e-17 | 0.01 | 0.08 | 0.08 | FALSE |
100 | GTEx | Skin Not Sun Exposed Suprapubic | ZNF641 | 0.15 | 0.11 | enet | 30 | 0.10 | 3.1e-06 | 6.17 | 6.4 | 1.4e-10 | -0.06 | 0.31 | 0.69 | FALSE |
101 | GTEx | Skin Not Sun Exposed Suprapubic | COX14 | 0.17 | 0.04 | lasso | 5 | 0.03 | 5.4e-03 | -4.71 | -7.0 | 2.3e-12 | 0.07 | 0.28 | 0.04 | FALSE |
102 | GTEx | Skin Not Sun Exposed Suprapubic | RP1-228P16.1 | 0.17 | 0.10 | enet | 23 | 0.16 | 4.1e-09 | 6.44 | -5.8 | 7.1e-09 | 0.05 | 0.04 | 0.96 | TRUE |
103 | GTEx | Skin Sun Exposed Lower leg | SMARCD1 | 0.07 | 0.02 | lasso | 2 | 0.03 | 1.4e-03 | -3.77 | -5.8 | 5.8e-09 | 0.01 | 0.30 | 0.04 | FALSE |
104 | GTEx | Skin Sun Exposed Lower leg | ATF1 | 0.07 | 0.07 | lasso | 4 | 0.08 | 6.1e-07 | -5.82 | -6.3 | 3.5e-10 | -0.01 | 0.97 | 0.02 | FALSE |
105 | GTEx | Skin Sun Exposed Lower leg | CERS5 | 0.09 | 0.06 | lasso | 4 | 0.07 | 9.4e-07 | -5.22 | 6.0 | 2.0e-09 | 0.00 | 1.00 | 0.00 | FALSE |
106 | GTEx | Skin Sun Exposed Lower leg | LMBR1L | 0.15 | 0.10 | lasso | 3 | 0.09 | 3.1e-08 | -6.36 | 6.4 | 1.2e-10 | -0.03 | 0.10 | 0.90 | FALSE |
107 | GTEx | Skin Sun Exposed Lower leg | ZNF641 | 0.21 | 0.03 | enet | 17 | 0.08 | 6.5e-07 | -1.83 | 6.4 | 2.0e-10 | -0.01 | 0.52 | 0.46 | FALSE |
108 | GTEx | Skin Sun Exposed Lower leg | RP1-228P16.1 | 0.29 | 0.24 | enet | 28 | 0.26 | 2.0e-21 | 6.56 | -7.8 | 6.2e-15 | 0.05 | 0.90 | 0.10 | FALSE |
109 | GTEx | Spleen | LMBR1L | 0.30 | 0.30 | enet | 11 | 0.30 | 2.4e-08 | -6.50 | 6.3 | 2.7e-10 | -0.09 | 0.08 | 0.88 | FALSE |
110 | GTEx | Spleen | RP1-228P16.1 | 0.35 | 0.23 | lasso | 7 | 0.19 | 1.6e-05 | 6.62 | -7.0 | 2.2e-12 | 0.04 | 0.03 | 0.97 | FALSE |
111 | GTEx | Stomach | DIP2B | 0.09 | 0.09 | lasso | 5 | 0.07 | 4.1e-04 | -6.10 | -6.2 | 4.5e-10 | -0.01 | 0.19 | 0.08 | FALSE |
112 | GTEx | Stomach | RP1-228P16.1 | 0.12 | 0.03 | lasso | 7 | 0.05 | 1.9e-03 | 6.75 | -7.0 | 2.9e-12 | 0.06 | 0.03 | 0.96 | FALSE |
113 | GTEx | Testis | SMARCD1 | 0.22 | 0.10 | enet | 22 | 0.10 | 2.6e-05 | 8.24 | -7.9 | 2.8e-15 | 0.09 | 0.73 | 0.03 | FALSE |
114 | GTEx | Testis | SENP1 | 0.20 | 0.13 | lasso | 5 | 0.10 | 2.7e-05 | 4.64 | 5.5 | 4.7e-08 | -0.03 | 0.70 | 0.12 | FALSE |
115 | GTEx | Testis | TUBA1B | 0.21 | 0.28 | lasso | 9 | 0.26 | 7.0e-12 | -6.38 | 6.4 | 1.1e-10 | -0.03 | 0.20 | 0.80 | FALSE |
116 | GTEx | Testis | FAIM2 | 0.27 | 0.09 | lasso | 5 | 0.06 | 9.3e-04 | -9.18 | 8.2 | 2.9e-16 | -0.77 | 0.04 | 0.88 | FALSE |
117 | GTEx | Testis | CERS5 | 0.12 | 0.06 | lasso | 6 | 0.07 | 4.0e-04 | 8.11 | 8.5 | 1.3e-17 | 0.02 | 0.19 | 0.08 | FALSE |
118 | GTEx | Testis | LMBR1L | 0.13 | 0.11 | lasso | 3 | 0.12 | 4.1e-06 | -5.81 | 6.2 | 5.3e-10 | -0.01 | 0.15 | 0.82 | FALSE |
119 | GTEx | Testis | ASB8 | 0.17 | 0.15 | lasso | 3 | 0.13 | 1.8e-06 | 8.62 | 8.3 | 7.7e-17 | -0.06 | 0.14 | 0.79 | FALSE |
120 | GTEx | Testis | PRKAG1 | 0.17 | 0.11 | lasso | 5 | 0.09 | 1.2e-04 | -6.64 | 7.2 | 6.0e-13 | -0.06 | 0.02 | 0.97 | FALSE |
121 | GTEx | Testis | RP1-228P16.1 | 0.38 | 0.28 | lasso | 6 | 0.31 | 4.0e-14 | 6.62 | -5.6 | 1.7e-08 | 0.04 | 0.83 | 0.17 | FALSE |
122 | GTEx | Testis | RP11-386G11.10 | 0.25 | 0.33 | lasso | 9 | 0.32 | 1.3e-14 | -6.38 | 6.3 | 2.7e-10 | -0.02 | 0.19 | 0.81 | FALSE |
123 | GTEx | Thyroid | LIMA1 | 0.08 | 0.06 | enet | 18 | 0.06 | 1.7e-05 | 8.57 | 6.9 | 5.5e-12 | -0.14 | 0.31 | 0.09 | FALSE |
124 | GTEx | Thyroid | CERS5 | 0.09 | 0.04 | lasso | 9 | 0.04 | 3.7e-04 | -5.22 | 6.9 | 5.9e-12 | 0.00 | 0.92 | 0.03 | FALSE |
125 | GTEx | Thyroid | LMBR1L | 0.12 | 0.10 | lasso | 3 | 0.10 | 6.4e-08 | -6.36 | 6.6 | 4.5e-11 | -0.03 | 0.12 | 0.88 | FALSE |
126 | GTEx | Uterus | RP1-228P16.1 | 0.32 | 0.09 | lasso | 15 | 0.01 | 2.1e-01 | 6.07 | -6.0 | 1.7e-09 | 0.02 | 0.10 | 0.34 | FALSE |
127 | GTEx | Whole Blood | DIP2B | 0.12 | 0.08 | lasso | 4 | 0.08 | 5.7e-08 | -6.10 | -6.2 | 4.4e-10 | -0.01 | 0.97 | 0.01 | FALSE |
128 | GTEx | Whole Blood | ATF1 | 0.07 | 0.09 | lasso | 4 | 0.07 | 3.5e-07 | 5.51 | 5.6 | 2.6e-08 | 0.02 | 0.85 | 0.15 | FALSE |
129 | GTEx | Whole Blood | RP1-228P16.1 | 0.10 | 0.06 | enet | 20 | 0.09 | 4.7e-09 | 8.81 | -7.8 | 6.4e-15 | 0.09 | 0.01 | 0.99 | FALSE |
130 | GTEx | Whole Blood | RP4-605O3.4 | 0.04 | 0.04 | lasso | 4 | 0.01 | 1.5e-02 | 7.92 | 8.1 | 6.2e-16 | 0.00 | 0.27 | 0.08 | FALSE |
131 | METSIM | Adipose | ASB8 | 0.03 | 0.00 | bslmm | 526 | 0.01 | 3.8e-02 | 6.62 | 8.0 | 1.4e-15 | -0.05 | 0.18 | 0.10 | TRUE |
132 | METSIM | Adipose | LMBR1L | 0.05 | 0.03 | blup | 303 | 0.03 | 5.2e-06 | -6.36 | 7.8 | 4.5e-15 | -0.03 | 0.11 | 0.89 | TRUE |
133 | NTR | Blood | ATF1 | 0.06 | 0.07 | enet | 35 | 0.07 | 4.0e-21 | 8.25 | 8.0 | 1.4e-15 | 0.05 | 0.12 | 0.88 | FALSE |
134 | YFS | Blood | ATF1 | 0.05 | 0.07 | lasso | 9 | 0.07 | 2.0e-21 | 8.21 | 8.9 | 7.3e-19 | 0.04 | 0.10 | 0.90 | TRUE |
135 | YFS | Blood | DIP2B | 0.36 | 0.27 | bslmm | 385 | 0.28 | 2.8e-90 | -6.10 | 7.0 | 2.8e-12 | 0.01 | 1.00 | 0.00 | FALSE |
136 | YFS | Blood | LIMA1 | 0.04 | 0.06 | enet | 31 | 0.06 | 3.5e-19 | -6.11 | -8.3 | 6.9e-17 | 0.04 | 1.00 | 0.00 | FALSE |
137 | YFS | Blood | TUBA1B | 0.02 | 0.02 | lasso | 8 | 0.02 | 2.7e-08 | -5.40 | -5.9 | 4.2e-09 | 0.09 | 0.82 | 0.18 | FALSE |
138 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C12orf62 | 0.01 | 0.00 | blup | 47 | 0.00 | 4.6e-02 | -4.71 | -6.3 | 2.9e-10 | -0.01 | 0.03 | 0.44 | FALSE |
139 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FAIM2 | 0.02 | 0.00 | blup | 71 | 0.01 | 8.5e-03 | 0.19 | 5.8 | 7.6e-09 | -0.36 | 0.16 | 0.12 | FALSE |
140 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SENP1 | 0.01 | 0.00 | blup | 87 | 0.01 | 1.8e-02 | -6.04 | -7.3 | 2.6e-13 | 0.08 | 0.04 | 0.37 | FALSE |
141 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SMARCD1 | 0.02 | 0.03 | lasso | 1 | 0.03 | 3.7e-06 | 7.96 | -8.0 | 1.8e-15 | 0.02 | 0.02 | 0.98 | FALSE |
142 | The Cancer Genome Atlas | Colon Adenocarcinoma | DIP2B | 0.13 | 0.14 | lasso | 2 | 0.12 | 1.3e-07 | -6.14 | -6.3 | 2.8e-10 | -0.02 | 0.89 | 0.05 | FALSE |
143 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C12orf62 | 0.02 | 0.01 | blup | 47 | 0.01 | 1.7e-02 | -4.27 | -6.6 | 3.9e-11 | -0.01 | 0.03 | 0.42 | FALSE |
144 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ASB8 | 0.04 | 0.03 | blup | 69 | 0.03 | 4.1e-04 | 6.40 | 5.7 | 1.0e-08 | -0.01 | 0.02 | 0.91 | FALSE |
145 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LIMA1 | 0.08 | 0.10 | blup | 59 | 0.10 | 1.8e-11 | 8.57 | -8.8 | 1.0e-18 | -0.02 | 0.02 | 0.98 | FALSE |
146 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | C12orf62 | 0.08 | 0.01 | blup | 47 | 0.06 | 3.2e-04 | -4.71 | -6.7 | 2.2e-11 | 0.00 | 0.16 | 0.73 | FALSE |
147 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ATF1 | 0.03 | 0.04 | lasso | 1 | 0.04 | 6.3e-05 | 8.17 | -8.2 | 3.2e-16 | -0.04 | 0.05 | 0.92 | FALSE |
148 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FAM186A | 0.03 | 0.03 | lasso | 6 | 0.02 | 2.2e-03 | -6.87 | 6.7 | 1.5e-11 | 0.02 | 0.07 | 0.06 | FALSE |
149 | The Cancer Genome Atlas | Brain Lower Grade Glioma | H1FNT | 0.08 | 0.08 | enet | 3 | 0.07 | 1.5e-08 | -5.51 | 5.4 | 8.8e-08 | -0.04 | 0.21 | 0.79 | FALSE |
150 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TUBA1C | 0.12 | 0.10 | lasso | 4 | 0.10 | 1.2e-11 | -5.39 | -5.5 | 3.6e-08 | 0.00 | 0.02 | 0.98 | FALSE |
151 | The Cancer Genome Atlas | Lung Adenocarcinoma | DIP2B | 0.09 | 0.02 | enet | 9 | 0.05 | 1.3e-06 | -6.14 | -7.1 | 9.9e-13 | -0.04 | 0.20 | 0.61 | FALSE |
152 | The Cancer Genome Atlas | Lung Adenocarcinoma | PFKM | 0.03 | 0.01 | lasso | 7 | 0.01 | 5.2e-02 | 5.71 | -6.0 | 1.9e-09 | 0.08 | 0.03 | 0.30 | TRUE |
153 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | ACCN2 | 0.04 | 0.03 | enet | 7 | 0.02 | 9.8e-03 | -4.71 | 5.9 | 4.0e-09 | 0.00 | 0.02 | 0.38 | FALSE |
154 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SENP1 | 0.09 | 0.02 | enet | 10 | 0.06 | 1.1e-04 | -6.04 | -8.2 | 2.0e-16 | 0.10 | 0.04 | 0.75 | TRUE |
155 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | TMEM106C | 0.09 | 0.00 | blup | 76 | 0.04 | 1.5e-03 | -6.04 | -5.4 | 8.5e-08 | 0.07 | 0.01 | 0.09 | FALSE |
156 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | TMEM106C | 0.27 | 0.10 | lasso | 3 | 0.09 | 1.7e-04 | -4.31 | 6.4 | 1.2e-10 | -0.05 | 0.06 | 0.62 | TRUE |
157 | The Cancer Genome Atlas | Prostate Adenocarcinoma | COL2A1 | 0.03 | 0.01 | blup | 91 | 0.03 | 2.7e-04 | 6.00 | -5.4 | 7.7e-08 | 0.07 | 0.05 | 0.51 | FALSE |
158 | The Cancer Genome Atlas | Rectum Adenocarcinoma | DHH | 0.22 | 0.03 | enet | 11 | 0.08 | 7.5e-03 | -6.22 | -5.6 | 1.6e-08 | -0.03 | 0.01 | 0.31 | FALSE |
159 | The Cancer Genome Atlas | Rectum Adenocarcinoma | SMARCD1 | 0.40 | 0.04 | blup | 48 | 0.14 | 4.1e-04 | 7.78 | -5.3 | 1.1e-07 | 0.05 | 0.02 | 0.58 | FALSE |
160 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | DIP2B | 0.11 | 0.02 | blup | 79 | 0.02 | 4.5e-02 | -5.66 | -5.6 | 2.7e-08 | -0.01 | 0.05 | 0.37 | FALSE |
161 | The Cancer Genome Atlas | Thyroid Carcinoma | ASB8 | 0.04 | 0.03 | lasso | 3 | 0.03 | 2.3e-04 | 6.88 | 6.7 | 1.5e-11 | -0.04 | 0.01 | 0.99 | FALSE |
162 | The Cancer Genome Atlas | Thyroid Carcinoma | C12orf62 | 0.06 | 0.02 | blup | 47 | 0.05 | 1.8e-05 | -3.49 | -5.9 | 3.6e-09 | -0.01 | 0.04 | 0.94 | FALSE |