[Hub]/) : Traits : Trunk fat-free mass : ← →

chr7:149,577,591-151,668,435

Best TWAS P=1.2e-24 · Best GWAS P=2.28e-36 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	TMEM176A	0.07	0.04	lasso	8	0.03	7.0e-05	7.60	7.8	8.4e-15	-0.18	0.68	0.03	FALSE
2	GTEx	Artery Coronary	RP11-148K1.12	0.31	-0.01	enet	16	0.00	2.2e-01	6.72	-8.0	1.3e-15	0.17	0.07	0.11	FALSE
3	GTEx	Brain Cerebellar Hemisphere	KCNH2	0.34	0.09	lasso	5	0.12	5.0e-04	4.93	-6.9	5.1e-12	0.67	0.02	0.83	TRUE
4	GTEx	Brain Cerebellum	KCNH2	0.35	0.20	enet	24	0.28	4.8e-09	-12.03	-10.2	1.2e-24	0.83	0.00	1.00	TRUE
5	GTEx	Colon Transverse	ABCB8	0.17	0.12	lasso	2	0.07	4.8e-04	5.82	5.7	1.2e-08	-0.10	0.36	0.03	TRUE
6	GTEx	Esophagus Mucosa	SLC4A2	0.11	0.03	enet	8	0.06	5.1e-05	6.16	6.7	2.0e-11	-0.23	0.86	0.02	FALSE
7	GTEx	Esophagus Mucosa	ABCB8	0.15	0.10	lasso	6	0.07	1.0e-05	4.82	5.2	1.6e-07	-0.14	0.94	0.01	FALSE
8	GTEx	Heart Atrial Appendage	TMEM176B	0.37	0.06	enet	15	0.23	1.1e-10	-0.88	-7.1	1.3e-12	0.34	0.55	0.10	FALSE
9	GTEx	Heart Left Ventricle	TMEM176A	0.16	0.10	enet	9	0.16	6.4e-09	-6.38	-5.4	8.1e-08	0.41	0.96	0.01	FALSE
10	GTEx	Heart Left Ventricle	TMEM176B	0.19	0.09	enet	10	0.14	3.9e-08	-6.38	-5.8	5.5e-09	0.38	0.98	0.00	FALSE
11	GTEx	Muscle Skeletal	AGAP3	0.10	0.04	lasso	5	0.03	8.5e-04	5.61	-5.2	1.6e-07	0.13	0.66	0.03	FALSE
12	GTEx	Thyroid	SMARCD3	0.10	0.01	lasso	3	0.01	3.5e-02	5.23	5.2	1.5e-07	-0.13	0.23	0.03	FALSE
13	GTEx	Uterus	GIMAP4	0.32	-0.01	enet	42	0.02	1.4e-01	-0.73	-8.3	8.0e-17	0.48	0.05	0.20	FALSE
14	METSIM	Adipose	AOC1	0.17	0.08	enet	26	0.11	3.2e-16	7.09	8.4	3.4e-17	-0.30	1.00	0.00	FALSE
15	ROSMAP	Brain Pre-frontal Cortex	TMEM176A	0.25	0.17	enet	19	0.20	1.5e-25	4.90	7.7	1.8e-14	-0.09	1.00	0.00	FALSE
16	ROSMAP	Brain Pre-frontal Cortex	RP11-148K1.12	0.17	0.16	lasso	4	0.16	5.2e-20	5.10	5.6	1.9e-08	-0.26	1.00	0.00	FALSE
17	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	TMEM176A	0.06	0.01	blup	60	0.03	1.0e-03	6.73	7.5	4.3e-14	-0.17	0.06	0.20	TRUE
18	The Cancer Genome Atlas	Breast Invasive Carcinoma	TMEM176A	0.04	0.01	blup	60	0.04	4.0e-08	6.73	5.4	5.9e-08	-0.19	0.12	0.19	FALSE
19	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	ABP1	0.16	0.19	lasso	4	0.20	9.3e-22	-8.32	7.9	2.5e-15	-0.25	1.00	0.00	TRUE
20	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	TMEM176A	0.19	0.05	lasso	6	0.13	2.6e-14	-8.32	8.5	2.1e-17	-0.11	0.06	0.94	TRUE
21	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	TMEM176B	0.04	0.02	lasso	2	0.02	1.5e-03	4.37	5.9	3.2e-09	-0.19	0.05	0.51	TRUE
22	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	TMEM176A	0.17	0.05	blup	60	0.07	5.1e-05	-2.70	6.2	8.0e-10	-0.02	0.35	0.30	FALSE
23	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	ABP1	0.26	0.20	enet	10	0.17	1.4e-08	-8.05	-9.4	5.3e-21	0.39	0.92	0.08	TRUE
24	The Cancer Genome Atlas	Lung Adenocarcinoma	ABCB8	0.07	0.04	enet	11	0.05	1.3e-06	-1.40	5.2	1.5e-07	-0.03	0.28	0.02	FALSE
25	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	ATG9B	0.08	0.03	lasso	3	0.03	2.5e-03	0.81	-6.3	3.3e-10	0.49	0.02	0.69	FALSE
26	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	ABP1	0.13	0.03	blup	102	0.05	4.4e-03	11.89	-5.3	1.3e-07	0.12	0.00	0.94	FALSE
27	The Cancer Genome Atlas	Prostate Adenocarcinoma	TMEM176A	0.15	0.01	blup	60	0.04	6.1e-05	10.61	7.2	7.3e-13	-0.17	0.07	0.68	FALSE
28	The Cancer Genome Atlas	Testicular Germ Cell Tumors	TMEM176A	0.15	0.00	lasso	10	0.02	5.7e-02	10.61	8.9	5.6e-19	-0.24	0.01	0.31	TRUE
29	The Cancer Genome Atlas	Thyroid Carcinoma	TMEM176A	0.32	0.09	blup	60	0.11	6.7e-11	-0.88	6.0	2.1e-09	-0.19	1.00	0.00	FALSE