[Hub]/) : Traits : Height :

chr1:225,576,058-231,834,901

Best TWAS P=1.78e-76 · Best GWAS P=8.33e-80 conditioned to NaN

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex JMJD4 0.10 0.05 bslmm 381 0.04 6.8e-06 -18.82 -14.2 1.4e-45 0.85 0.01 0.99 TRUE
2 CommonMind Brain Pre-frontal Cortex LOC100130093 0.09 0.07 enet 30 0.10 5.6e-12 12.18 9.2 3.7e-20 -0.20 1.00 0.00 FALSE
3 CommonMind Brain Pre-frontal Cortex SNAP47 0.23 0.19 lasso 7 0.19 5.7e-23 -14.45 14.4 7.7e-47 -0.62 1.00 0.00 FALSE
4 GTEx Adipose Subcutaneous SNAP47 0.06 0.06 lasso 3 0.05 4.5e-05 -12.58 13.7 1.4e-42 -0.51 0.36 0.22 FALSE
5 GTEx Adipose Subcutaneous RP11-396C23.2 0.09 0.00 enet 14 0.00 7.9e-01 -4.23 -5.3 1.1e-07 -0.01 0.02 0.89 FALSE
6 GTEx Adipose Subcutaneous RP5-1139B12.2 0.08 0.02 enet 17 0.03 2.2e-03 5.67 5.9 4.0e-09 -0.07 0.21 0.05 FALSE
7 GTEx Adipose Visceral Omentum ADCK3 0.11 0.00 enet 36 0.03 1.7e-02 6.04 -5.9 4.0e-09 0.14 0.23 0.03 TRUE
8 GTEx Artery Coronary ARV1 0.19 0.15 lasso 4 0.07 1.7e-03 -5.93 5.9 3.7e-09 0.01 0.08 0.77 TRUE
9 GTEx Artery Tibial RP5-1139B12.2 0.09 0.05 lasso 5 0.05 4.5e-05 5.91 5.4 8.5e-08 -0.10 0.92 0.00 FALSE
10 GTEx Brain Cortex SNAP47 0.21 0.05 lasso 9 0.04 2.2e-02 -13.91 18.5 1.8e-76 -0.88 0.04 0.67 TRUE
11 GTEx Brain Frontal Cortex BA9 OBSCN 0.27 0.00 lasso 5 0.00 2.9e-01 3.84 5.6 2.3e-08 -0.02 0.06 0.07 TRUE
12 GTEx Brain Nucleus accumbens basal ganglia SNAP47 0.38 0.05 lasso 6 0.07 4.9e-03 2.20 6.1 1.4e-09 -0.15 0.16 0.22 TRUE
13 GTEx Breast Mammary Tissue (Male) CDC42BPA 0.03 0.01 enet 1 0.00 3.0e-01 10.79 -10.8 3.9e-27 0.18 0.05 0.06 TRUE
14 GTEx Cells EBV-transformed lymphocytes JMJD4 0.13 0.06 lasso 4 0.03 2.9e-02 -16.92 -14.6 3.7e-48 0.51 0.05 0.45 FALSE
15 GTEx Cells Transformed fibroblasts SNAP47 0.17 0.12 enet 18 0.12 1.9e-09 -13.91 9.3 1.7e-20 -0.41 0.98 0.01 FALSE
16 GTEx Colon Transverse TTC13 0.11 0.08 enet 11 0.11 8.3e-06 -5.68 5.4 7.4e-08 -0.01 0.18 0.79 FALSE
17 GTEx Colon Transverse ARV1 0.34 0.25 enet 25 0.28 6.1e-14 -5.91 5.6 1.8e-08 -0.02 0.13 0.87 FALSE
18 GTEx Esophagus Mucosa IBA57 0.08 0.02 enet 12 0.07 1.8e-05 5.58 -5.2 1.9e-07 0.00 0.27 0.04 FALSE
19 GTEx Esophagus Mucosa ACBD3 0.14 0.07 lasso 3 0.08 8.3e-06 -4.23 5.1 2.8e-07 -0.04 0.22 0.69 FALSE
20 GTEx Esophagus Muscularis ADCK3 0.07 0.02 lasso 5 0.01 4.1e-02 4.54 -6.2 4.2e-10 0.18 0.27 0.05 TRUE
21 GTEx Muscle Skeletal SNAP47 0.09 0.08 lasso 10 0.08 7.7e-08 -14.45 16.0 1.4e-57 -0.61 0.94 0.06 FALSE
22 GTEx Muscle Skeletal CDC42BPA 0.12 0.06 enet 28 0.11 8.2e-11 -5.07 -6.8 9.9e-12 0.31 1.00 0.00 FALSE
23 GTEx Nerve Tibial SNAP47 0.06 0.01 enet 16 0.03 6.5e-03 -17.57 13.7 5.9e-43 -0.64 0.05 0.86 TRUE
24 GTEx Nerve Tibial ACBD3 0.11 0.03 lasso 3 0.02 7.3e-03 -4.14 5.1 2.9e-07 -0.01 0.07 0.76 FALSE
25 GTEx Skin Not Sun Exposed Suprapubic CDC42BPA 0.13 0.00 enet 30 0.03 8.6e-03 -13.91 -13.0 6.8e-39 0.48 0.08 0.70 FALSE
26 GTEx Skin Sun Exposed Lower leg CDC42BPA 0.10 0.00 enet 32 0.02 1.3e-02 1.19 -8.4 6.0e-17 0.31 0.20 0.24 FALSE
27 GTEx Testis SNAP47 0.23 0.21 enet 15 0.21 7.5e-10 -13.97 12.2 4.9e-34 -0.47 0.98 0.01 FALSE
28 GTEx Thyroid C1orf35 0.10 0.00 lasso 6 0.01 4.1e-02 6.52 -11.0 6.4e-28 0.37 0.05 0.07 FALSE
29 METSIM Adipose RNF187 0.07 0.02 lasso 5 0.03 2.2e-05 3.95 6.3 2.6e-10 -0.26 0.13 0.77 FALSE
30 METSIM Adipose SNAP47 0.06 0.06 lasso 6 0.08 2.0e-11 -17.57 16.6 7.2e-62 -0.77 0.94 0.06 FALSE
31 METSIM Adipose TTC13 0.08 0.06 enet 27 0.06 4.9e-09 -5.91 5.8 7.7e-09 0.01 0.16 0.84 FALSE
32 NTR Blood C1orf69 0.02 0.01 bslmm 343 0.01 1.4e-05 -0.34 -6.3 3.5e-10 0.08 0.83 0.00 FALSE
33 ROSMAP Brain Pre-frontal Cortex OBSCN 0.32 0.18 lasso 19 0.27 3.5e-34 2.20 5.2 1.8e-07 -0.11 1.00 0.00 FALSE
34 YFS Blood JMJD4 0.11 0.12 lasso 4 0.12 3.7e-36 -17.57 -17.7 4.1e-70 0.82 1.00 0.00 FALSE
35 YFS Blood SNAP47 0.02 0.00 bslmm 403 0.01 6.4e-04 -12.27 12.6 2.4e-36 -0.48 0.09 0.32 FALSE
36 YFS Blood TTC13 0.02 0.00 bslmm 627 0.00 1.8e-02 -5.90 5.8 5.3e-09 0.04 0.19 0.74 FALSE
37 YFS Blood URB2 0.10 0.11 bslmm 414 0.12 2.7e-37 5.67 5.9 4.0e-09 0.03 0.01 0.99 FALSE
38 The Cancer Genome Atlas Bladder Urothelial Carcinoma ACBD3 0.04 0.04 blup 42 0.02 4.6e-03 -4.34 5.8 6.7e-09 -0.02 0.03 0.33 TRUE
39 The Cancer Genome Atlas Breast Invasive Carcinoma LOC100130093 0.02 0.01 lasso 4 0.01 4.0e-03 12.71 9.4 4.2e-21 -0.29 0.10 0.02 FALSE
40 The Cancer Genome Atlas Breast Invasive Carcinoma TAF5L 0.09 0.02 lasso 2 0.02 2.2e-05 5.67 5.7 1.2e-08 0.02 0.00 1.00 FALSE
41 The Cancer Genome Atlas Breast Invasive Carcinoma URB2 0.05 0.01 blup 85 0.02 1.6e-04 6.02 6.5 8.9e-11 0.03 0.00 0.99 TRUE
42 The Cancer Genome Atlas Colon Adenocarcinoma SNAP47 0.05 0.05 lasso 3 0.06 2.4e-04 -13.91 18.0 4.7e-72 -0.83 0.01 0.90 FALSE
43 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma CABC1 0.04 0.01 blup 116 0.02 1.3e-03 2.95 -5.5 3.7e-08 0.07 0.17 0.02 TRUE
44 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma TTC13 0.07 0.01 blup 90 0.03 1.1e-02 -4.19 5.6 1.7e-08 0.02 0.02 0.59 FALSE
45 The Cancer Genome Atlas Brain Lower Grade Glioma JMJD4 0.07 0.01 enet 9 0.03 3.6e-04 -18.85 -10.0 1.0e-23 0.67 0.00 0.80 TRUE
46 The Cancer Genome Atlas Brain Lower Grade Glioma SNAP47 0.08 0.06 blup 54 0.08 1.2e-09 -13.91 13.4 9.3e-41 -0.58 0.98 0.02 FALSE
47 The Cancer Genome Atlas Liver Hepatocellular Carcinoma SNAP47 0.07 0.05 blup 54 0.05 2.9e-03 -13.91 15.6 6.0e-55 -0.66 0.02 0.37 FALSE
48 The Cancer Genome Atlas Lung Adenocarcinoma LOC100130093 0.03 0.02 enet 3 0.03 7.2e-05 12.41 7.3 3.7e-13 -0.24 0.14 0.04 FALSE
49 The Cancer Genome Atlas Lung Adenocarcinoma SNAP47 0.03 0.02 enet 4 0.02 1.5e-03 -13.97 14.2 5.8e-46 -0.54 0.41 0.15 FALSE
50 The Cancer Genome Atlas Lung Squamous Cell Carcinoma ARV1 0.04 0.03 enet 9 0.03 9.8e-05 -3.71 5.6 2.1e-08 -0.01 0.10 0.21 FALSE
51 The Cancer Genome Atlas Lung Squamous Cell Carcinoma TAF5L 0.09 0.00 blup 68 0.01 3.5e-02 4.01 5.5 3.1e-08 0.05 0.00 0.50 FALSE
52 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma TTC13 0.04 0.04 blup 90 0.03 3.0e-03 -4.26 5.5 4.9e-08 0.03 0.07 0.45 FALSE
53 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma JMJD4 0.36 0.06 blup 42 0.13 5.6e-06 -1.02 -5.4 7.3e-08 0.41 0.05 0.32 FALSE
54 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma LOC100130093 0.16 0.10 blup 42 0.05 4.7e-03 13.14 14.5 9.1e-48 -0.58 0.22 0.25 FALSE
55 The Cancer Genome Atlas Prostate Adenocarcinoma ACBD3 0.03 0.02 blup 42 0.04 7.0e-05 -4.36 5.2 1.6e-07 -0.03 0.10 0.48 FALSE
56 The Cancer Genome Atlas Prostate Adenocarcinoma ARF1 0.06 0.02 blup 31 0.03 1.0e-03 -2.29 -7.2 5.4e-13 0.16 0.19 0.68 FALSE
57 The Cancer Genome Atlas Prostate Adenocarcinoma MRPL55 0.04 0.00 enet 7 0.02 8.2e-03 -6.24 -7.4 1.7e-13 0.10 0.01 0.80 TRUE
58 The Cancer Genome Atlas Prostate Adenocarcinoma ZNF678 0.03 0.01 blup 91 0.02 2.4e-03 -14.13 -17.2 1.2e-66 0.76 0.03 0.57 TRUE
59 The Cancer Genome Atlas Soft Tissue Sarcoma MRPL55 0.05 0.02 blup 22 0.04 2.8e-03 3.92 -5.5 4.9e-08 0.12 0.02 0.16 FALSE
60 The Cancer Genome Atlas Soft Tissue Sarcoma URB2 0.11 0.05 lasso 2 0.03 3.9e-03 6.02 6.1 1.4e-09 0.01 0.00 0.92 FALSE