[Hub]/) : Traits : Height :

chr3:54,846,329-59,191,320

Best TWAS P=2.3e-48 · Best GWAS P=3.4e-44 conditioned to NaN

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex DNAH12 0.07 0.07 lasso 3 0.07 2.1e-09 -5.71 -6.2 5.6e-10 0.08 1.00 0.00 FALSE
2 CommonMind Brain Pre-frontal Cortex ERC2 0.12 0.00 bslmm 972 0.04 1.8e-05 -6.67 -7.8 5.4e-15 0.34 0.56 0.08 FALSE
3 CommonMind Brain Pre-frontal Cortex KCTD6 0.05 0.02 lasso 9 0.01 8.1e-03 7.35 7.6 2.1e-14 -0.06 0.40 0.02 FALSE
4 CommonMind Brain Pre-frontal Cortex PXK 0.12 0.00 bslmm 473 0.03 1.9e-04 7.90 5.6 1.8e-08 0.01 0.33 0.02 FALSE
5 CommonMind Brain Pre-frontal Cortex RPP14 0.08 0.05 lasso 4 0.08 1.3e-09 7.77 6.1 1.1e-09 -0.06 1.00 0.00 FALSE
6 GTEx Adipose Subcutaneous FAM208A 0.12 0.09 enet 11 0.12 1.1e-09 -7.78 11.1 1.7e-28 -0.86 0.02 0.98 FALSE
7 GTEx Adipose Subcutaneous CCDC66 0.23 0.07 lasso 2 0.12 7.0e-10 -6.18 5.3 1.1e-07 -0.58 0.98 0.02 FALSE
8 GTEx Adipose Visceral Omentum ABHD6 0.15 0.00 lasso 7 0.00 2.6e-01 -5.30 -5.5 4.5e-08 0.03 0.08 0.21 TRUE
9 GTEx Adrenal Gland RP11-755B10.4 0.11 0.06 lasso 11 0.04 1.4e-02 5.41 -5.4 7.1e-08 0.00 0.28 0.07 TRUE
10 GTEx Artery Aorta CCDC66 0.21 0.22 lasso 3 0.20 4.1e-11 -6.18 6.1 9.5e-10 -0.63 1.00 0.00 FALSE
11 GTEx Artery Tibial CCDC66 0.32 0.22 lasso 5 0.25 1.6e-19 -6.18 5.3 1.5e-07 -0.56 1.00 0.00 FALSE
12 GTEx Artery Tibial RP11-755B10.4 0.11 0.06 enet 13 0.04 2.1e-04 5.49 -6.0 2.4e-09 -0.05 0.55 0.03 TRUE
13 GTEx Brain Caudate basal ganglia CCDC66 0.18 0.16 lasso 5 0.16 3.3e-05 -6.18 5.6 2.0e-08 -0.58 0.26 0.19 FALSE
14 GTEx Brain Cerebellar Hemisphere PDHB 0.21 0.13 lasso 4 0.07 7.6e-03 7.88 8.0 1.5e-15 -0.05 0.22 0.05 TRUE
15 GTEx Brain Cerebellum PDHB 0.20 0.03 enet 20 0.10 5.8e-04 7.86 5.6 1.7e-08 -0.03 0.09 0.05 TRUE
16 GTEx Brain Cortex CCDC66 0.18 0.24 lasso 1 0.20 3.8e-06 -6.18 6.2 6.3e-10 -0.63 0.07 0.74 FALSE
17 GTEx Brain Cortex RP11-802O23.3 0.34 0.06 lasso 7 0.05 1.8e-02 7.82 7.7 1.4e-14 -0.05 0.10 0.05 FALSE
18 GTEx Brain Frontal Cortex BA9 CCDC66 0.16 0.18 lasso 3 0.14 1.3e-04 -6.18 6.6 4.0e-11 -0.65 0.14 0.45 FALSE
19 GTEx Brain Hippocampus CCDC66 0.23 0.23 lasso 3 0.20 2.1e-05 -8.72 8.6 7.1e-18 -0.63 0.25 0.16 TRUE
20 GTEx Brain Hypothalamus CCDC66 0.18 0.26 lasso 3 0.22 5.6e-06 -6.18 5.8 7.3e-09 -0.63 0.13 0.25 FALSE
21 GTEx Brain Putamen basal ganglia CCDC66 0.36 0.28 lasso 3 0.25 1.3e-06 -6.18 5.8 6.6e-09 -0.59 0.13 0.31 FALSE
22 GTEx Breast Mammary Tissue CCDC66 0.19 0.21 lasso 3 0.19 5.7e-10 -6.18 6.0 1.6e-09 -0.64 0.47 0.53 FALSE
23 GTEx Breast Mammary Tissue (Male) CCDC66 0.05 0.03 lasso 3 0.04 5.1e-02 -8.77 7.3 3.2e-13 -0.61 0.04 0.13 FALSE
24 GTEx Breast Mammary Tissue (Female) CCDC66 0.16 0.06 enet 10 0.14 4.3e-05 -6.18 5.4 7.1e-08 -0.68 0.03 0.83 FALSE
25 GTEx Cells EBV-transformed lymphocytes CCDC66 0.45 0.27 enet 37 0.29 3.7e-10 -10.65 -9.3 1.3e-20 0.34 0.99 0.00 TRUE
26 GTEx Cells Transformed fibroblasts FAM208A 0.10 0.00 lasso 4 0.00 1.3e-01 -13.78 12.1 6.8e-34 -0.94 0.01 0.98 FALSE
27 GTEx Cells Transformed fibroblasts PXK 0.12 0.13 lasso 9 0.12 2.6e-09 -5.94 -6.0 1.7e-09 0.05 1.00 0.00 FALSE
28 GTEx Cells Transformed fibroblasts ARF4 0.18 0.17 lasso 9 0.16 9.1e-12 7.82 -8.1 4.0e-16 -0.01 1.00 0.00 FALSE
29 GTEx Colon Transverse ARF4 0.20 0.10 lasso 10 0.12 1.7e-06 7.82 -7.8 4.3e-15 -0.03 0.80 0.02 FALSE
30 GTEx Esophagus Mucosa ARHGEF3 0.12 0.06 enet 13 0.03 2.7e-03 -10.57 -7.4 1.9e-13 0.20 0.15 0.09 FALSE
31 GTEx Esophagus Mucosa CCDC66 0.23 0.14 lasso 3 0.17 2.9e-11 -6.18 5.8 5.1e-09 -0.64 0.96 0.03 FALSE
32 GTEx Esophagus Muscularis CCDC66 0.27 0.25 lasso 6 0.26 8.0e-16 -6.18 6.3 2.7e-10 -0.63 1.00 0.00 FALSE
33 GTEx Heart Atrial Appendage ACOX2 0.13 0.00 enet 11 0.02 5.9e-02 -4.61 6.2 5.4e-10 -0.06 0.14 0.04 FALSE
34 GTEx Heart Left Ventricle FLNB-AS1 0.11 0.00 lasso 4 0.00 2.0e-01 7.57 6.6 5.3e-11 0.00 0.07 0.20 FALSE
35 GTEx Liver PDE12 0.23 0.00 enet 20 0.03 6.6e-02 3.34 -7.0 2.0e-12 0.03 0.05 0.40 FALSE
36 GTEx Lung CCDC66 0.13 0.15 lasso 2 0.15 1.4e-11 -6.18 6.2 6.3e-10 -0.63 1.00 0.00 FALSE
37 GTEx Nerve Tibial CCDC66 0.30 0.27 lasso 4 0.27 2.1e-19 -6.18 6.9 5.9e-12 -0.66 1.00 0.00 FALSE
38 GTEx Ovary CCDC66 0.47 0.22 lasso 7 0.14 2.5e-04 -6.18 6.4 1.8e-10 -0.64 0.07 0.18 FALSE
39 GTEx Ovary RP11-755B10.4 0.24 0.21 lasso 8 0.19 2.4e-05 4.19 -5.4 6.0e-08 0.07 0.12 0.06 TRUE
40 GTEx Pancreas CCDC66 0.19 0.16 lasso 3 0.15 9.1e-07 -6.18 6.1 1.1e-09 -0.63 0.45 0.05 FALSE
41 GTEx Pituitary CCDC66 0.16 0.16 enet 31 0.12 6.8e-04 -6.18 10.8 2.3e-27 -0.78 0.02 0.94 FALSE
42 GTEx Skin Sun Exposed Lower leg FAM208A 0.06 0.04 lasso 2 0.03 2.0e-03 -8.95 8.9 4.4e-19 -0.61 0.23 0.41 TRUE
43 GTEx Skin Sun Exposed Lower leg CCDC66 0.09 0.09 lasso 5 0.05 8.1e-05 -6.18 5.9 3.8e-09 -0.61 0.94 0.00 FALSE
44 GTEx Stomach CCDC66 0.16 0.06 lasso 4 0.06 8.5e-04 -6.18 6.5 8.6e-11 -0.66 0.07 0.64 FALSE
45 GTEx Thyroid FLNB 0.10 0.08 lasso 8 0.08 1.1e-06 -2.48 5.4 5.2e-08 0.05 0.80 0.02 TRUE
46 GTEx Thyroid CCDC66 0.22 0.26 lasso 4 0.26 5.9e-20 -6.18 6.8 8.9e-12 -0.67 1.00 0.00 FALSE
47 GTEx Thyroid FLNB-AS1 0.10 0.08 lasso 3 0.05 1.5e-04 7.30 7.5 8.7e-14 0.03 0.87 0.00 FALSE
48 GTEx Thyroid RP11-802O23.3 0.06 0.05 lasso 4 0.04 9.9e-04 7.77 7.7 1.1e-14 -0.05 0.50 0.03 FALSE
49 GTEx Whole Blood PXK 0.06 0.06 lasso 1 0.06 2.3e-06 -5.51 5.5 3.6e-08 -0.04 0.92 0.00 FALSE
50 METSIM Adipose ACOX2 0.06 0.02 bslmm 419 0.02 1.3e-04 0.19 6.7 2.4e-11 0.02 0.33 0.10 FALSE
51 METSIM Adipose DNASE1L3 0.09 0.01 enet 14 0.06 4.1e-09 -4.97 6.0 2.1e-09 -0.01 0.99 0.00 FALSE
52 NTR Blood DNASE1L3 0.03 0.02 lasso 4 0.03 3.2e-09 -5.29 5.8 8.8e-09 -0.01 1.00 0.00 FALSE
53 NTR Blood PDHB 0.02 0.01 bslmm 434 0.01 1.1e-03 -6.09 -5.5 3.0e-08 0.00 0.74 0.01 FALSE
54 NTR Blood RPP14 0.01 0.01 lasso 1 0.01 2.2e-03 -5.22 -5.2 1.8e-07 0.01 0.82 0.00 FALSE
55 ROSMAP Brain Pre-frontal Cortex PDHB 0.21 0.24 lasso 4 0.30 1.1e-38 7.34 6.3 4.0e-10 -0.06 1.00 0.00 FALSE
56 ROSMAP Brain Pre-frontal Cortex ARF4 0.12 0.15 lasso 7 0.16 1.4e-19 7.86 9.2 3.3e-20 -0.02 1.00 0.00 TRUE
57 ROSMAP Brain Pre-frontal Cortex CCDC66 0.24 0.24 lasso 6 0.25 1.0e-31 -6.18 5.6 2.7e-08 -0.57 1.00 0.00 FALSE
58 YFS Blood ABHD6 0.02 0.02 lasso 4 0.02 8.4e-07 6.25 6.1 1.3e-09 -0.02 0.97 0.00 TRUE
59 YFS Blood CCDC66 0.11 0.09 lasso 8 0.11 6.0e-34 -10.46 -11.2 5.3e-29 0.50 1.00 0.00 FALSE
60 The Cancer Genome Atlas Breast Invasive Carcinoma CCDC66 0.09 0.03 lasso 8 0.05 4.2e-11 -9.38 -12.4 3.9e-35 0.65 0.19 0.81 FALSE
61 The Cancer Genome Atlas Colon Adenocarcinoma CCDC66 0.14 0.12 lasso 2 0.10 1.2e-06 -9.29 -9.2 2.4e-20 0.43 0.64 0.14 FALSE
62 The Cancer Genome Atlas Glioblastoma Multiforme CCDC66 0.19 0.02 enet 14 0.12 1.7e-04 2.41 -8.3 8.0e-17 0.24 0.04 0.07 TRUE
63 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma CCDC66 0.05 0.05 blup 56 0.06 1.0e-07 -13.93 -14.4 4.4e-47 0.81 0.00 1.00 FALSE
64 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C3orf63 0.03 0.01 enet 4 0.01 1.3e-02 -13.77 12.7 1.0e-36 -0.93 0.01 0.82 FALSE
65 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma CCDC66 0.09 0.05 blup 56 0.06 5.3e-07 -10.62 -11.9 1.1e-32 0.60 0.90 0.10 FALSE
66 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma ABHD6 0.09 0.07 lasso 3 0.03 4.3e-03 7.77 7.7 1.7e-14 -0.04 0.00 0.98 TRUE
67 The Cancer Genome Atlas Brain Lower Grade Glioma CCDC66 0.16 0.13 enet 12 0.16 3.1e-17 -10.46 -9.8 9.4e-23 0.29 1.00 0.00 FALSE
68 The Cancer Genome Atlas Lung Adenocarcinoma CCDC66 0.05 0.06 blup 56 0.05 9.7e-07 -13.91 -14.6 2.3e-48 0.80 0.00 1.00 TRUE
69 The Cancer Genome Atlas Lung Squamous Cell Carcinoma CCDC66 0.03 0.03 blup 56 0.03 9.6e-05 -9.29 -11.9 1.1e-32 0.57 0.34 0.26 FALSE
70 The Cancer Genome Atlas Lung Squamous Cell Carcinoma DNASE1L3 0.05 0.05 blup 58 0.06 2.5e-07 -5.92 7.2 4.5e-13 -0.01 0.98 0.01 FALSE
71 The Cancer Genome Atlas Pancreatic Adenocarcinoma FAM116A 0.17 0.11 enet 3 0.10 6.7e-05 -5.63 -5.3 1.1e-07 -0.13 0.10 0.04 FALSE
72 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma CCDC66 0.08 0.01 blup 56 0.07 7.2e-04 -10.46 -9.8 1.0e-22 0.36 0.12 0.07 FALSE
73 The Cancer Genome Atlas Prostate Adenocarcinoma CCDC66 0.15 0.10 enet 11 0.13 7.3e-14 -9.29 -9.7 2.1e-22 0.39 1.00 0.00 TRUE
74 The Cancer Genome Atlas Prostate Adenocarcinoma RPP14 0.04 0.03 lasso 2 0.02 1.9e-03 6.98 -6.8 1.3e-11 0.04 0.10 0.44 FALSE
75 The Cancer Genome Atlas Prostate Adenocarcinoma WNT5A 0.06 0.05 enet 5 0.05 1.0e-05 10.95 11.7 1.7e-31 -0.04 0.12 0.87 TRUE
76 The Cancer Genome Atlas Rectum Adenocarcinoma CCDC66 0.20 -0.01 lasso 3 0.00 3.0e-01 -9.29 -9.1 7.1e-20 0.49 0.03 0.19 FALSE
77 The Cancer Genome Atlas Stomach Adenocarcinoma CCDC66 0.05 0.01 blup 57 0.02 8.4e-03 -9.38 -11.8 3.5e-32 0.64 0.06 0.58 FALSE
78 The Cancer Genome Atlas Testicular Germ Cell Tumors RPP14 0.10 0.06 lasso 8 0.08 1.2e-03 -5.22 -5.2 1.6e-07 0.03 0.03 0.22 FALSE
79 The Cancer Genome Atlas Thyroid Carcinoma CCDC66 0.14 0.05 blup 56 0.08 2.3e-08 -6.18 -6.8 1.2e-11 0.04 0.92 0.00 FALSE