Best TWAS P=3.28e-58 · Best GWAS P=1.25e-55 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ACSL6 | 0.13 | 0.07 | enet | 47 | 0.08 | 1.9e-10 | 7.2 | 6.7 | 2.0e-11 | -0.38 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | C5orf56 | 0.03 | 0.01 | lasso | 5 | 0.01 | 1.0e-02 | 3.3 | -5.8 | 4.8e-09 | 0.37 | 0.46 | 0.06 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | KIF3A | 0.05 | 0.01 | bslmm | 433 | 0.01 | 1.3e-02 | -1.9 | 5.4 | 5.7e-08 | -0.29 | 0.08 | 0.05 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | LOC553103 | 0.05 | 0.02 | bslmm | 433 | 0.03 | 3.2e-04 | 12.3 | -10.1 | 7.2e-24 | 0.44 | 0.81 | 0.01 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | PDLIM4 | 0.11 | 0.18 | lasso | 5 | 0.18 | 8.0e-21 | 12.0 | 12.3 | 9.9e-35 | -0.60 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | KIF3A | 0.08 | 0.07 | lasso | 3 | 0.07 | 1.2e-06 | 4.5 | -5.1 | 2.7e-07 | 0.23 | 0.95 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | HINT1 | 0.10 | 0.07 | enet | 16 | 0.06 | 8.8e-06 | 2.8 | 5.3 | 1.3e-07 | -0.38 | 0.80 | 0.02 | FALSE |
8 | GTEx | Adipose Subcutaneous | SLC22A5 | 0.05 | 0.04 | lasso | 4 | 0.04 | 4.2e-04 | -15.7 | 13.9 | 9.0e-44 | -0.88 | 0.01 | 0.99 | FALSE |
9 | GTEx | Adipose Subcutaneous | AC034220.3 | 0.11 | 0.11 | lasso | 10 | 0.09 | 4.8e-08 | 12.9 | -12.8 | 1.2e-37 | 0.78 | 0.97 | 0.03 | FALSE |
10 | GTEx | Adipose Visceral Omentum | AC034220.3 | 0.10 | 0.09 | lasso | 7 | 0.08 | 7.3e-05 | 12.9 | -12.9 | 3.9e-38 | 0.78 | 0.41 | 0.33 | FALSE |
11 | GTEx | Adrenal Gland | AC034220.3 | 0.12 | 0.11 | lasso | 16 | 0.08 | 7.7e-04 | 12.9 | -13.1 | 1.7e-39 | 0.78 | 0.55 | 0.28 | FALSE |
12 | GTEx | Artery Aorta | P4HA2 | 0.12 | 0.14 | lasso | 2 | 0.11 | 1.2e-06 | -14.8 | -14.8 | 1.9e-49 | 0.91 | 0.28 | 0.70 | FALSE |
13 | GTEx | Artery Aorta | KIF3A | 0.13 | 0.07 | enet | 7 | 0.07 | 6.3e-05 | 5.0 | -5.3 | 1.3e-07 | 0.25 | 0.93 | 0.00 | FALSE |
14 | GTEx | Artery Aorta | AC034220.3 | 0.08 | 0.06 | lasso | 3 | 0.05 | 1.1e-03 | 12.7 | -14.4 | 7.4e-47 | 0.78 | 0.32 | 0.51 | FALSE |
15 | GTEx | Artery Aorta | P4HA2-AS1 | 0.08 | 0.03 | lasso | 3 | 0.01 | 6.6e-02 | -14.4 | -14.7 | 6.0e-49 | 0.92 | 0.12 | 0.76 | FALSE |
16 | GTEx | Artery Tibial | P4HA2 | 0.12 | 0.15 | lasso | 6 | 0.14 | 3.2e-11 | -14.3 | -14.5 | 2.2e-47 | 0.92 | 0.69 | 0.31 | FALSE |
17 | GTEx | Artery Tibial | HINT1 | 0.11 | 0.04 | enet | 18 | 0.06 | 1.0e-05 | 3.3 | 7.6 | 3.2e-14 | -0.49 | 0.52 | 0.12 | FALSE |
18 | GTEx | Artery Tibial | SLC22A5 | 0.18 | 0.12 | enet | 8 | 0.12 | 2.5e-09 | -15.7 | 14.7 | 6.5e-49 | -0.92 | 0.00 | 1.00 | FALSE |
19 | GTEx | Artery Tibial | P4HA2-AS1 | 0.10 | 0.09 | lasso | 4 | 0.11 | 1.0e-08 | -14.2 | -14.9 | 4.0e-50 | 0.90 | 0.42 | 0.58 | FALSE |
20 | GTEx | Brain Caudate basal ganglia | AC034220.3 | 0.41 | 0.45 | enet | 19 | 0.46 | 8.8e-15 | 12.9 | -13.0 | 2.3e-38 | 0.79 | 0.99 | 0.01 | FALSE |
21 | GTEx | Brain Cerebellar Hemisphere | AC116366.6 | 0.21 | 0.24 | lasso | 5 | 0.24 | 9.9e-07 | 4.5 | -5.5 | 3.5e-08 | 0.46 | 0.51 | 0.06 | FALSE |
22 | GTEx | Brain Cortex | AC034220.3 | 0.43 | 0.39 | lasso | 15 | 0.17 | 2.4e-05 | 12.9 | -12.6 | 1.2e-36 | 0.76 | 0.96 | 0.03 | FALSE |
23 | GTEx | Brain Frontal Cortex BA9 | AC034220.3 | 0.31 | 0.20 | lasso | 14 | 0.21 | 3.3e-06 | 12.4 | -10.9 | 7.4e-28 | 0.70 | 0.64 | 0.22 | FALSE |
24 | GTEx | Brain Hippocampus | AC034220.3 | 0.21 | 0.15 | lasso | 14 | 0.18 | 5.8e-05 | 12.4 | -12.3 | 1.4e-34 | 0.85 | 0.09 | 0.83 | FALSE |
25 | GTEx | Brain Hypothalamus | AC034220.3 | 0.38 | 0.14 | enet | 33 | 0.28 | 3.2e-07 | 7.5 | -8.2 | 2.7e-16 | 0.45 | 0.47 | 0.19 | FALSE |
26 | GTEx | Brain Nucleus accumbens basal ganglia | SLC22A5 | 0.15 | 0.00 | enet | 24 | 0.05 | 1.4e-02 | 12.7 | -5.5 | 4.3e-08 | 0.48 | 0.11 | 0.10 | FALSE |
27 | GTEx | Brain Nucleus accumbens basal ganglia | AC034220.3 | 0.24 | 0.24 | enet | 34 | 0.24 | 3.7e-07 | 12.9 | -13.1 | 5.4e-39 | 0.77 | 0.65 | 0.31 | FALSE |
28 | GTEx | Breast Mammary Tissue | SLC22A5 | 0.10 | 0.02 | enet | 16 | 0.06 | 4.5e-04 | -15.7 | 9.7 | 3.0e-22 | -0.74 | 0.02 | 0.97 | FALSE |
29 | GTEx | Breast Mammary Tissue (Female) | SLC22A5 | 0.04 | -0.01 | lasso | 3 | 0.01 | 1.3e-01 | 2.3 | 7.0 | 2.7e-12 | -0.54 | 0.04 | 0.28 | FALSE |
30 | GTEx | Cells EBV-transformed lymphocytes | SLC22A5 | 0.37 | 0.05 | lasso | 13 | 0.10 | 2.8e-04 | -15.7 | 12.2 | 5.1e-34 | -0.85 | 0.01 | 0.98 | FALSE |
31 | GTEx | Cells Transformed fibroblasts | PDLIM4 | 0.08 | 0.09 | lasso | 1 | 0.07 | 6.4e-06 | 12.2 | 12.2 | 5.3e-34 | -0.60 | 0.79 | 0.08 | FALSE |
32 | GTEx | Cells Transformed fibroblasts | SLC22A5 | 0.32 | 0.28 | lasso | 7 | 0.35 | 1.6e-27 | 14.4 | 15.3 | 5.4e-53 | -0.91 | 0.03 | 0.97 | FALSE |
33 | GTEx | Colon Sigmoid | AC034220.3 | 0.18 | 0.11 | lasso | 12 | 0.06 | 3.7e-03 | 12.4 | -12.8 | 2.0e-37 | 0.77 | 0.22 | 0.26 | FALSE |
34 | GTEx | Colon Transverse | SLC22A5 | 0.12 | 0.07 | enet | 8 | 0.07 | 2.5e-04 | -15.7 | 13.4 | 9.6e-41 | -0.86 | 0.01 | 0.98 | FALSE |
35 | GTEx | Colon Transverse | AC034220.3 | 0.30 | 0.15 | lasso | 3 | 0.11 | 8.4e-06 | 12.7 | -13.2 | 6.9e-40 | 0.79 | 0.92 | 0.04 | FALSE |
36 | GTEx | Esophagus Gastroesophageal Junction | SEPT8 | 0.22 | 0.08 | lasso | 12 | 0.10 | 2.2e-04 | 12.5 | -13.2 | 9.8e-40 | 0.67 | 0.23 | 0.66 | FALSE |
37 | GTEx | Esophagus Gastroesophageal Junction | UQCRQ | 0.21 | 0.01 | enet | 30 | 0.04 | 2.0e-02 | 9.4 | 8.3 | 6.6e-17 | -0.39 | 0.09 | 0.16 | TRUE |
38 | GTEx | Esophagus Mucosa | P4HA2 | 0.23 | 0.10 | lasso | 6 | 0.14 | 6.1e-10 | -14.8 | -14.7 | 5.6e-49 | 0.87 | 0.02 | 0.98 | FALSE |
39 | GTEx | Esophagus Mucosa | SLC22A5 | 0.16 | 0.16 | enet | 8 | 0.16 | 6.3e-11 | -15.7 | 13.9 | 7.3e-44 | -0.94 | 0.01 | 0.99 | FALSE |
40 | GTEx | Esophagus Mucosa | AC034220.3 | 0.08 | 0.03 | lasso | 3 | 0.05 | 4.7e-04 | 12.4 | -12.8 | 1.2e-37 | 0.78 | 0.89 | 0.09 | FALSE |
41 | GTEx | Esophagus Mucosa | P4HA2-AS1 | 0.09 | 0.06 | lasso | 6 | 0.08 | 5.4e-06 | -14.8 | -14.1 | 2.7e-45 | 0.89 | 0.02 | 0.98 | FALSE |
42 | GTEx | Esophagus Muscularis | AC034220.3 | 0.12 | 0.08 | enet | 20 | 0.07 | 3.8e-05 | 12.7 | -11.7 | 1.9e-31 | 0.67 | 0.83 | 0.08 | FALSE |
43 | GTEx | Heart Atrial Appendage | KIF3A | 0.11 | 0.00 | enet | 18 | 0.01 | 1.8e-01 | 6.0 | -7.8 | 4.8e-15 | 0.45 | 0.13 | 0.10 | FALSE |
44 | GTEx | Heart Atrial Appendage | AC034220.3 | 0.16 | 0.09 | enet | 17 | 0.18 | 1.7e-08 | 12.8 | -12.9 | 3.4e-38 | 0.81 | 0.39 | 0.61 | FALSE |
45 | GTEx | Heart Left Ventricle | AC034220.3 | 0.25 | 0.22 | lasso | 6 | 0.25 | 8.6e-14 | 12.7 | -13.6 | 5.0e-42 | 0.77 | 0.95 | 0.05 | FALSE |
46 | GTEx | Liver | AC034220.3 | 0.30 | 0.16 | lasso | 6 | 0.16 | 3.9e-05 | 12.8 | -10.4 | 3.0e-25 | 0.62 | 0.57 | 0.08 | TRUE |
47 | GTEx | Lung | RAD50 | 0.12 | 0.09 | lasso | 11 | 0.08 | 1.3e-06 | 7.8 | 5.5 | 3.3e-08 | -0.26 | 0.93 | 0.00 | FALSE |
48 | GTEx | Lung | SLC22A5 | 0.10 | 0.15 | enet | 11 | 0.13 | 3.4e-10 | -15.7 | 14.4 | 1.0e-46 | -0.96 | 0.00 | 1.00 | FALSE |
49 | GTEx | Lung | AC004041.2 | 0.13 | 0.08 | lasso | 9 | 0.08 | 8.8e-07 | 7.8 | 6.3 | 3.9e-10 | -0.30 | 0.97 | 0.00 | TRUE |
50 | GTEx | Muscle Skeletal | SLC22A5 | 0.10 | 0.01 | lasso | 3 | 0.02 | 6.6e-03 | 3.8 | 5.8 | 4.8e-09 | -0.30 | 0.25 | 0.10 | FALSE |
51 | GTEx | Muscle Skeletal | AC034220.3 | 0.27 | 0.23 | lasso | 9 | 0.24 | 9.1e-24 | 12.9 | -13.9 | 8.4e-44 | 0.79 | 1.00 | 0.00 | FALSE |
52 | GTEx | Muscle Skeletal | MIR3936 | 0.04 | 0.01 | lasso | 4 | 0.00 | 9.9e-02 | 12.2 | -14.4 | 2.6e-47 | 0.80 | 0.07 | 0.72 | FALSE |
53 | GTEx | Nerve Tibial | P4HA2 | 0.19 | 0.12 | enet | 26 | 0.14 | 6.2e-10 | 12.8 | -13.0 | 1.5e-38 | 0.81 | 0.78 | 0.22 | FALSE |
54 | GTEx | Nerve Tibial | AC034220.3 | 0.15 | 0.11 | lasso | 5 | 0.10 | 1.9e-07 | 12.9 | -12.5 | 4.5e-36 | 0.78 | 1.00 | 0.00 | FALSE |
55 | GTEx | Nerve Tibial | P4HA2-AS1 | 0.14 | 0.05 | lasso | 8 | 0.08 | 3.8e-06 | -13.0 | -13.2 | 5.0e-40 | 0.84 | 0.46 | 0.53 | FALSE |
56 | GTEx | Ovary | PDLIM4 | 0.25 | 0.22 | enet | 10 | 0.05 | 2.1e-02 | 4.7 | -8.3 | 1.2e-16 | 0.59 | 0.19 | 0.58 | TRUE |
57 | GTEx | Ovary | AC004041.2 | 0.21 | -0.01 | lasso | 2 | -0.01 | 7.7e-01 | 11.5 | -13.2 | 6.0e-40 | 0.54 | 0.07 | 0.22 | FALSE |
58 | GTEx | Pancreas | P4HA2 | 0.22 | 0.21 | lasso | 13 | 0.20 | 5.3e-09 | 3.2 | -6.2 | 6.7e-10 | 0.54 | 0.86 | 0.12 | FALSE |
59 | GTEx | Pancreas | P4HA2-AS1 | 0.16 | 0.16 | lasso | 5 | 0.16 | 3.2e-07 | 3.2 | -5.2 | 1.7e-07 | 0.46 | 0.71 | 0.18 | FALSE |
60 | GTEx | Pituitary | AC034220.3 | 0.25 | 0.22 | lasso | 12 | 0.18 | 3.1e-05 | 12.3 | -13.2 | 8.7e-40 | 0.73 | 0.68 | 0.07 | FALSE |
61 | GTEx | Prostate | AC034220.3 | 0.38 | 0.37 | lasso | 5 | 0.37 | 3.0e-10 | 12.7 | -12.2 | 2.3e-34 | 0.76 | 0.61 | 0.38 | FALSE |
62 | GTEx | Skin Not Sun Exposed Suprapubic | PDLIM4 | 0.13 | 0.08 | lasso | 2 | 0.06 | 2.6e-04 | -15.7 | 13.6 | 2.8e-42 | -0.89 | 0.01 | 0.98 | FALSE |
63 | GTEx | Skin Not Sun Exposed Suprapubic | SLC22A4 | 0.13 | 0.00 | lasso | 4 | 0.01 | 7.1e-02 | 5.3 | 10.0 | 2.2e-23 | -0.68 | 0.15 | 0.10 | FALSE |
64 | GTEx | Skin Not Sun Exposed Suprapubic | SLC22A5 | 0.13 | 0.05 | lasso | 8 | 0.05 | 8.3e-04 | 12.9 | 14.9 | 5.6e-50 | -0.90 | 0.03 | 0.97 | FALSE |
65 | GTEx | Skin Sun Exposed Lower leg | PDLIM4 | 0.09 | 0.08 | lasso | 8 | 0.09 | 1.0e-07 | -14.8 | 16.1 | 3.3e-58 | -0.95 | 0.01 | 0.99 | TRUE |
66 | GTEx | Skin Sun Exposed Lower leg | KIF3A | 0.11 | 0.04 | lasso | 4 | 0.04 | 6.2e-04 | 4.5 | -5.2 | 2.2e-07 | 0.24 | 0.61 | 0.05 | FALSE |
67 | GTEx | Skin Sun Exposed Lower leg | SLC22A5 | 0.25 | 0.21 | lasso | 3 | 0.20 | 1.4e-16 | -15.7 | 15.5 | 3.5e-54 | -0.99 | 0.00 | 1.00 | FALSE |
68 | GTEx | Skin Sun Exposed Lower leg | AC034220.3 | 0.12 | 0.03 | enet | 22 | 0.07 | 3.5e-06 | -1.9 | -6.0 | 1.5e-09 | 0.24 | 0.57 | 0.02 | FALSE |
69 | GTEx | Spleen | SLC22A5 | 0.26 | 0.28 | lasso | 4 | 0.28 | 6.6e-08 | -15.7 | -15.2 | 4.5e-52 | 0.97 | 0.01 | 0.98 | FALSE |
70 | GTEx | Stomach | SLC22A5 | 0.09 | 0.04 | lasso | 4 | 0.01 | 9.0e-02 | 14.8 | 15.5 | 4.9e-54 | -0.78 | 0.04 | 0.78 | FALSE |
71 | GTEx | Stomach | AC034220.3 | 0.17 | 0.15 | enet | 21 | 0.16 | 4.2e-08 | 12.3 | -13.4 | 6.1e-41 | 0.72 | 0.98 | 0.02 | FALSE |
72 | GTEx | Testis | P4HA2 | 0.14 | 0.13 | lasso | 5 | 0.11 | 1.4e-05 | -14.8 | -15.4 | 2.3e-53 | 0.95 | 0.01 | 0.99 | FALSE |
73 | GTEx | Testis | PDLIM4 | 0.15 | 0.07 | enet | 8 | 0.05 | 2.5e-03 | 12.4 | -11.7 | 1.8e-31 | 0.77 | 0.23 | 0.20 | FALSE |
74 | GTEx | Testis | AC034220.3 | 0.15 | 0.12 | lasso | 9 | 0.12 | 4.4e-06 | 12.9 | -12.9 | 4.8e-38 | 0.78 | 0.75 | 0.17 | FALSE |
75 | GTEx | Thyroid | P4HA2 | 0.08 | 0.07 | enet | 9 | 0.06 | 3.5e-05 | -14.3 | -13.9 | 4.0e-44 | 0.89 | 0.27 | 0.66 | FALSE |
76 | GTEx | Thyroid | PDLIM4 | 0.05 | 0.02 | enet | 5 | 0.01 | 3.1e-02 | -13.0 | 14.8 | 1.1e-49 | -0.87 | 0.02 | 0.96 | FALSE |
77 | GTEx | Thyroid | SLC22A4 | 0.06 | 0.02 | lasso | 4 | 0.02 | 2.3e-02 | 12.3 | -9.8 | 1.8e-22 | 0.50 | 0.38 | 0.10 | FALSE |
78 | GTEx | Thyroid | SLC22A5 | 0.17 | 0.07 | lasso | 5 | 0.13 | 4.8e-10 | 2.9 | 11.3 | 1.8e-29 | -0.75 | 0.01 | 0.99 | FALSE |
79 | GTEx | Thyroid | AC034220.3 | 0.29 | 0.29 | lasso | 5 | 0.31 | 4.8e-24 | 12.3 | -10.4 | 1.9e-25 | 0.51 | 1.00 | 0.00 | FALSE |
80 | GTEx | Thyroid | P4HA2-AS1 | 0.08 | 0.06 | enet | 14 | 0.05 | 1.6e-04 | -14.3 | -14.6 | 1.4e-48 | 0.86 | 0.11 | 0.85 | FALSE |
81 | GTEx | Uterus | P4HA2 | 0.58 | -0.01 | lasso | 5 | 0.02 | 1.6e-01 | 4.5 | -10.4 | 2.7e-25 | 0.42 | 0.04 | 0.49 | FALSE |
82 | GTEx | Whole Blood | SLC22A4 | 0.07 | 0.05 | enet | 16 | 0.05 | 4.6e-05 | 14.4 | 13.8 | 4.8e-43 | -0.75 | 0.02 | 0.97 | FALSE |
83 | GTEx | Whole Blood | SLC22A5 | 0.09 | 0.12 | lasso | 2 | 0.10 | 1.7e-09 | -15.7 | 15.7 | 2.4e-55 | -0.99 | 0.00 | 1.00 | FALSE |
84 | GTEx | Whole Blood | AC034220.3 | 0.08 | 0.05 | enet | 31 | 0.06 | 4.0e-06 | -15.7 | 15.2 | 6.5e-52 | -0.86 | 0.01 | 0.99 | FALSE |
85 | GTEx | Whole Blood | AC116366.6 | 0.05 | 0.04 | lasso | 17 | 0.03 | 5.7e-04 | 7.8 | -10.5 | 1.4e-25 | 0.52 | 0.22 | 0.62 | FALSE |
86 | METSIM | Adipose | P4HA2 | 0.09 | 0.08 | lasso | 12 | 0.09 | 2.4e-13 | -14.2 | -11.9 | 6.8e-33 | 0.81 | 0.77 | 0.23 | FALSE |
87 | METSIM | Adipose | PDLIM4 | 0.05 | 0.04 | lasso | 4 | 0.02 | 2.8e-04 | -13.0 | 13.1 | 2.0e-39 | -0.78 | 0.82 | 0.12 | FALSE |
88 | METSIM | Adipose | SLC22A4 | 0.05 | 0.02 | lasso | 3 | 0.03 | 8.4e-06 | -8.9 | 9.9 | 3.1e-23 | -0.56 | 0.89 | 0.07 | TRUE |
89 | METSIM | Adipose | SLC22A5 | 0.05 | 0.08 | lasso | 1 | 0.08 | 1.0e-11 | -15.7 | 15.7 | 2.3e-55 | -0.99 | 0.00 | 1.00 | FALSE |
90 | NTR | Blood | C5orf56 | 0.01 | 0.01 | blup | 439 | 0.01 | 1.7e-03 | 10.2 | 6.6 | 4.8e-11 | -0.43 | 0.21 | 0.25 | FALSE |
91 | NTR | Blood | IRF1 | 0.03 | 0.02 | blup | 424 | 0.01 | 5.7e-05 | 7.8 | -9.1 | 7.6e-20 | 0.54 | 1.00 | 0.00 | FALSE |
92 | NTR | Blood | SLC22A4 | 0.02 | 0.00 | blup | 423 | 0.01 | 5.2e-04 | -8.9 | 10.6 | 5.0e-26 | -0.70 | 0.02 | 0.97 | FALSE |
93 | NTR | Blood | SLC22A5 | 0.02 | 0.01 | lasso | 5 | 0.02 | 2.3e-06 | -11.4 | 6.4 | 1.8e-10 | -0.54 | 0.36 | 0.51 | FALSE |
94 | ROSMAP | Brain Pre-frontal Cortex | PDLIM4 | 0.25 | 0.27 | lasso | 4 | 0.26 | 2.7e-33 | 12.2 | 12.9 | 7.5e-38 | -0.66 | 1.00 | 0.00 | FALSE |
95 | ROSMAP | Brain Pre-frontal Cortex | SLC22A4 | 0.03 | 0.05 | lasso | 2 | 0.04 | 1.2e-05 | 13.7 | 13.7 | 7.4e-43 | -0.78 | 0.28 | 0.68 | FALSE |
96 | ROSMAP | Brain Pre-frontal Cortex | AC034220.3 | 0.04 | 0.02 | blup | 415 | 0.04 | 1.3e-05 | 8.8 | -10.6 | 1.9e-26 | 0.67 | 0.93 | 0.05 | FALSE |
97 | YFS | Blood | SLC22A4 | 0.10 | 0.12 | enet | 47 | 0.14 | 5.1e-42 | 12.8 | 13.0 | 1.8e-38 | -0.81 | 1.00 | 0.00 | FALSE |
98 | YFS | Blood | SLC22A5 | 0.38 | 0.36 | bslmm | 430 | 0.37 | 3.0e-128 | -15.7 | 15.3 | 3.6e-53 | -0.97 | 0.00 | 1.00 | FALSE |
99 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | PDLIM4 | 0.05 | 0.01 | enet | 4 | 0.02 | 1.2e-02 | 11.5 | 10.5 | 1.1e-25 | -0.47 | 0.08 | 0.03 | FALSE |
100 | The Cancer Genome Atlas | Breast Invasive Carcinoma | P4HA2 | 0.03 | 0.02 | blup | 47 | 0.03 | 3.1e-06 | -14.2 | -11.3 | 1.0e-29 | 0.78 | 0.01 | 0.99 | FALSE |
101 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PDLIM4 | 0.05 | 0.05 | lasso | 4 | 0.05 | 9.0e-11 | 12.2 | 12.3 | 1.3e-34 | -0.63 | 1.00 | 0.00 | FALSE |
102 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SLC22A4 | 0.05 | 0.01 | enet | 7 | 0.02 | 1.6e-05 | -15.7 | 13.9 | 1.1e-43 | -0.87 | 0.01 | 0.98 | FALSE |
103 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SLC22A5 | 0.05 | 0.07 | enet | 11 | 0.09 | 5.3e-17 | 12.3 | 13.7 | 9.9e-43 | -0.74 | 1.00 | 0.00 | FALSE |
104 | The Cancer Genome Atlas | Colon Adenocarcinoma | PDLIM4 | 0.14 | 0.04 | enet | 9 | 0.09 | 6.8e-06 | 11.9 | 9.0 | 2.2e-19 | -0.56 | 0.54 | 0.09 | FALSE |
105 | The Cancer Genome Atlas | Colon Adenocarcinoma | SLC22A5 | 0.08 | 0.04 | blup | 92 | 0.07 | 1.2e-04 | 14.4 | 14.3 | 2.4e-46 | -0.84 | 0.03 | 0.91 | FALSE |
106 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SLC22A4 | 0.02 | 0.02 | lasso | 1 | 0.02 | 3.0e-03 | 12.5 | 12.5 | 1.1e-35 | -0.64 | 0.14 | 0.47 | FALSE |
107 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SLC22A5 | 0.06 | 0.05 | blup | 93 | 0.08 | 1.2e-09 | 12.8 | 14.8 | 1.3e-49 | -0.84 | 0.07 | 0.93 | FALSE |
108 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PDLIM4 | 0.09 | 0.02 | lasso | 6 | 0.05 | 4.5e-06 | 11.5 | 12.0 | 2.6e-33 | -0.62 | 0.15 | 0.72 | FALSE |
109 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SLC22A4 | 0.03 | 0.03 | lasso | 1 | 0.02 | 3.5e-03 | 12.9 | 12.9 | 7.5e-38 | -0.78 | 0.30 | 0.38 | FALSE |
110 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SLC22A4 | 0.04 | 0.03 | blup | 108 | 0.01 | 7.1e-02 | 12.4 | 13.0 | 1.4e-38 | -0.66 | 0.10 | 0.25 | FALSE |
111 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C5orf56 | 0.03 | 0.01 | blup | 98 | 0.02 | 4.2e-03 | 7.8 | -6.5 | 1.0e-10 | 0.48 | 0.14 | 0.10 | FALSE |
112 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | PDLIM4 | 0.08 | 0.03 | blup | 67 | 0.05 | 2.4e-03 | 12.3 | 11.7 | 9.1e-32 | -0.60 | 0.04 | 0.38 | FALSE |
113 | The Cancer Genome Atlas | Lung Adenocarcinoma | SLC22A5 | 0.06 | 0.03 | lasso | 4 | 0.02 | 9.3e-04 | 14.4 | 13.7 | 8.8e-43 | -0.75 | 0.06 | 0.74 | FALSE |
114 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C5orf56 | 0.07 | 0.01 | blup | 98 | 0.03 | 3.2e-04 | 8.0 | -7.4 | 1.5e-13 | 0.40 | 0.25 | 0.08 | FALSE |
115 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SLC22A4 | 0.04 | 0.01 | blup | 111 | 0.03 | 3.0e-04 | 6.8 | 12.5 | 1.1e-35 | -0.71 | 0.03 | 0.84 | FALSE |
116 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SLC22A5 | 0.05 | 0.03 | blup | 93 | 0.05 | 1.9e-06 | 12.4 | 15.0 | 5.5e-51 | -0.82 | 0.03 | 0.97 | FALSE |
117 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SLC22A5 | 0.12 | 0.04 | blup | 92 | 0.07 | 2.2e-05 | 14.4 | 10.1 | 7.1e-24 | -0.51 | 0.09 | 0.68 | FALSE |
118 | The Cancer Genome Atlas | Prostate Adenocarcinoma | P4HA2 | 0.04 | 0.01 | blup | 47 | 0.03 | 4.4e-04 | 3.7 | -5.2 | 2.1e-07 | 0.47 | 0.05 | 0.17 | FALSE |
119 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PDLIM4 | 0.32 | 0.36 | enet | 13 | 0.37 | 3.8e-40 | 11.5 | 13.1 | 2.8e-39 | -0.67 | 1.00 | 0.00 | FALSE |
120 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SLC22A4 | 0.09 | 0.07 | blup | 108 | 0.09 | 3.0e-09 | 12.8 | 13.7 | 8.1e-43 | -0.84 | 0.06 | 0.94 | FALSE |
121 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SLC22A5 | 0.12 | 0.05 | lasso | 4 | 0.08 | 1.8e-08 | 5.3 | 9.5 | 1.5e-21 | -0.49 | 0.96 | 0.01 | FALSE |
122 | The Cancer Genome Atlas | Rectum Adenocarcinoma | SLC22A5 | 0.27 | 0.21 | lasso | 12 | 0.24 | 2.0e-06 | 12.3 | 9.8 | 7.3e-23 | -0.47 | 0.51 | 0.22 | FALSE |
123 | The Cancer Genome Atlas | Stomach Adenocarcinoma | SLC22A5 | 0.05 | 0.01 | blup | 92 | 0.02 | 1.1e-02 | 6.7 | 11.6 | 6.9e-31 | -0.56 | 0.09 | 0.14 | FALSE |
124 | The Cancer Genome Atlas | Thyroid Carcinoma | C5orf56 | 0.06 | 0.04 | blup | 98 | 0.03 | 1.3e-03 | 8.0 | -12.8 | 2.2e-37 | 0.60 | 0.80 | 0.10 | FALSE |
125 | The Cancer Genome Atlas | Thyroid Carcinoma | IRF1 | 0.05 | 0.02 | blup | 83 | 0.03 | 1.5e-03 | -12.6 | -14.3 | 2.2e-46 | 0.88 | 0.01 | 0.80 | FALSE |
126 | The Cancer Genome Atlas | Thyroid Carcinoma | P4HA2 | 0.21 | 0.35 | enet | 10 | 0.35 | 4.7e-35 | -14.2 | -13.5 | 1.6e-41 | 0.89 | 0.00 | 1.00 | FALSE |
127 | The Cancer Genome Atlas | Thyroid Carcinoma | SLC22A5 | 0.03 | 0.02 | lasso | 1 | 0.01 | 2.6e-02 | 14.4 | 14.4 | 6.7e-47 | -0.80 | 0.02 | 0.71 | FALSE |