Best TWAS P=2.2e-72 · Best GWAS P=6.5e-73 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ARHGAP1 | 0.16 | 0.04 | enet | 18 | 0.04 | 2.3e-05 | -3.7725 | -6.2 | 7.6e-10 | -0.27 | 0.67 | 0.02 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | C11orf49 | 0.40 | 0.19 | bslmm | 329 | 0.20 | 2.9e-23 | -5.7438 | -5.3 | 1.4e-07 | -0.17 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | LRP4 | 0.04 | 0.05 | lasso | 4 | 0.04 | 6.6e-06 | 14.7794 | 15.5 | 2.1e-54 | 0.69 | 0.88 | 0.10 | FALSE |
4 | GTEx | Adipose Subcutaneous | ACP2 | 0.08 | 0.03 | enet | 18 | 0.03 | 3.5e-03 | 8.4531 | -10.3 | 4.9e-25 | -0.50 | 0.35 | 0.05 | FALSE |
5 | GTEx | Adipose Subcutaneous | PACSIN3 | 0.17 | 0.11 | lasso | 3 | 0.10 | 1.1e-08 | 7.1222 | 6.8 | 1.5e-11 | 0.41 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | ARHGAP1 | 0.08 | 0.03 | lasso | 6 | 0.05 | 3.4e-05 | 14.5046 | -16.3 | 1.7e-59 | -0.80 | 0.50 | 0.39 | FALSE |
7 | GTEx | Adipose Subcutaneous | ATG13 | 0.06 | 0.02 | lasso | 3 | 0.00 | 1.5e-01 | 5.4047 | -5.7 | 1.0e-08 | -0.39 | 0.10 | 0.03 | FALSE |
8 | GTEx | Adipose Visceral Omentum | ACP2 | 0.08 | 0.05 | lasso | 5 | 0.05 | 1.4e-03 | 8.6314 | -8.9 | 3.5e-19 | -0.39 | 0.40 | 0.06 | FALSE |
9 | GTEx | Adipose Visceral Omentum | ARHGAP1 | 0.12 | 0.02 | enet | 15 | 0.04 | 3.8e-03 | 14.2821 | -13.8 | 1.5e-43 | -0.71 | 0.08 | 0.37 | FALSE |
10 | GTEx | Adipose Visceral Omentum | ATG13 | 0.09 | 0.06 | lasso | 2 | 0.06 | 5.8e-04 | 5.1436 | -6.9 | 5.2e-12 | -0.45 | 0.25 | 0.12 | FALSE |
11 | GTEx | Artery Aorta | PACSIN3 | 0.10 | 0.04 | lasso | 4 | 0.03 | 1.1e-02 | 7.3930 | 8.7 | 2.3e-18 | 0.62 | 0.32 | 0.18 | FALSE |
12 | GTEx | Artery Aorta | CKAP5 | 0.09 | 0.12 | lasso | 1 | 0.07 | 1.2e-04 | 14.7172 | 14.7 | 5.0e-49 | 0.76 | 0.48 | 0.50 | FALSE |
13 | GTEx | Artery Tibial | LRP4 | 0.06 | 0.00 | lasso | 5 | 0.00 | 6.4e-01 | -3.3233 | -8.1 | 5.5e-16 | -0.26 | 0.06 | 0.04 | FALSE |
14 | GTEx | Artery Tibial | ZNF408 | 0.10 | 0.00 | lasso | 6 | 0.04 | 2.0e-04 | 16.5087 | -15.9 | 3.2e-57 | -0.71 | 0.14 | 0.63 | FALSE |
15 | GTEx | Brain Cerebellar Hemisphere | MADD | 0.44 | 0.14 | lasso | 7 | 0.21 | 4.0e-06 | 8.4531 | -6.7 | 1.6e-11 | -0.39 | 0.39 | 0.05 | FALSE |
16 | GTEx | Brain Cerebellar Hemisphere | ACP2 | 0.29 | 0.05 | enet | 16 | 0.12 | 5.9e-04 | 10.4227 | -11.7 | 1.2e-31 | -0.62 | 0.07 | 0.24 | FALSE |
17 | GTEx | Brain Cerebellum | MADD | 0.21 | 0.00 | enet | 13 | 0.11 | 3.3e-04 | 8.6314 | -6.0 | 2.4e-09 | -0.35 | 0.21 | 0.05 | FALSE |
18 | GTEx | Brain Cerebellum | PACSIN3 | 0.27 | 0.00 | lasso | 12 | 0.01 | 2.2e-01 | 7.1583 | 11.6 | 2.3e-31 | 0.65 | 0.09 | 0.09 | FALSE |
19 | GTEx | Brain Hypothalamus | NR1H3 | 0.25 | 0.18 | lasso | 5 | 0.10 | 2.7e-03 | 8.4569 | 8.3 | 1.4e-16 | 0.47 | 0.13 | 0.18 | FALSE |
20 | GTEx | Brain Putamen basal ganglia | CKAP5 | 0.25 | 0.07 | lasso | 3 | 0.14 | 4.4e-04 | 8.7215 | 11.2 | 5.1e-29 | 0.53 | 0.06 | 0.07 | FALSE |
21 | GTEx | Breast Mammary Tissue | ACP2 | 0.18 | 0.00 | enet | 33 | 0.00 | 2.0e-01 | -6.4031 | -7.6 | 2.2e-14 | -0.48 | 0.05 | 0.19 | FALSE |
22 | GTEx | Breast Mammary Tissue | CKAP5 | 0.09 | 0.05 | enet | 16 | 0.03 | 1.3e-02 | 14.7010 | 9.1 | 1.2e-19 | 0.46 | 0.60 | 0.08 | FALSE |
23 | GTEx | Breast Mammary Tissue | ARHGAP1 | 0.05 | 0.00 | enet | 14 | 0.01 | 1.3e-01 | 16.5087 | -15.7 | 7.9e-56 | -0.79 | 0.03 | 0.82 | FALSE |
24 | GTEx | Breast Mammary Tissue | ATG13 | 0.10 | 0.00 | lasso | 3 | 0.00 | 3.7e-01 | 10.1120 | -10.4 | 2.1e-25 | -0.61 | 0.08 | 0.10 | FALSE |
25 | GTEx | Breast Mammary Tissue (Female) | NR1H3 | 0.30 | -0.01 | enet | 7 | 0.00 | 3.9e-01 | -9.1277 | 10.8 | 2.5e-27 | 0.46 | 0.03 | 0.05 | FALSE |
26 | GTEx | Breast Mammary Tissue (Female) | ACP2 | 0.03 | 0.00 | lasso | 1 | 0.02 | 1.0e-01 | 5.1451 | -5.2 | 2.0e-07 | -0.25 | 0.03 | 0.10 | FALSE |
27 | GTEx | Cells EBV-transformed lymphocytes | LRP4 | 0.68 | 0.00 | lasso | 10 | 0.00 | 5.0e-01 | -9.3979 | -8.7 | 3.8e-18 | -0.45 | 0.03 | 0.08 | FALSE |
28 | GTEx | Cells EBV-transformed lymphocytes | ACP2 | 0.17 | 0.03 | lasso | 6 | 0.03 | 4.2e-02 | 9.5647 | -8.9 | 4.4e-19 | -0.43 | 0.34 | 0.03 | FALSE |
29 | GTEx | Cells EBV-transformed lymphocytes | ATG13 | 0.13 | 0.07 | enet | 16 | 0.07 | 2.1e-03 | 10.4698 | -5.8 | 6.2e-09 | -0.39 | 0.16 | 0.05 | FALSE |
30 | GTEx | Cells Transformed fibroblasts | PACSIN3 | 0.07 | 0.00 | enet | 7 | 0.01 | 1.2e-01 | 14.4274 | -8.7 | 4.1e-18 | -0.25 | 0.12 | 0.04 | FALSE |
31 | GTEx | Esophagus Gastroesophageal Junction | NUP160 | 0.18 | 0.02 | enet | 18 | 0.11 | 7.1e-05 | -3.7470 | 5.6 | 2.4e-08 | 0.06 | 0.27 | 0.05 | FALSE |
32 | GTEx | Esophagus Gastroesophageal Junction | CKAP5 | 0.11 | 0.04 | lasso | 3 | 0.03 | 2.1e-02 | 17.2729 | 15.5 | 3.2e-54 | 0.76 | 0.10 | 0.68 | FALSE |
33 | GTEx | Esophagus Mucosa | ACP2 | 0.07 | 0.04 | enet | 11 | 0.04 | 6.2e-04 | 7.3553 | -9.3 | 1.4e-20 | -0.43 | 0.75 | 0.09 | FALSE |
34 | GTEx | Esophagus Mucosa | ARFGAP2 | 0.05 | 0.06 | lasso | 4 | 0.05 | 4.4e-04 | 17.2729 | 17.6 | 5.3e-69 | 0.83 | 0.18 | 0.47 | FALSE |
35 | GTEx | Esophagus Mucosa | PACSIN3 | 0.24 | 0.19 | lasso | 8 | 0.21 | 7.5e-14 | 6.6770 | 7.6 | 3.6e-14 | 0.52 | 1.00 | 0.00 | FALSE |
36 | GTEx | Esophagus Mucosa | ATG13 | 0.12 | 0.03 | enet | 3 | 0.04 | 1.0e-03 | 5.4047 | -8.0 | 1.5e-15 | -0.49 | 0.18 | 0.03 | FALSE |
37 | GTEx | Esophagus Muscularis | PACSIN3 | 0.15 | 0.06 | lasso | 2 | 0.04 | 2.0e-03 | 7.0579 | 7.0 | 2.8e-12 | 0.43 | 0.34 | 0.03 | FALSE |
38 | GTEx | Esophagus Muscularis | CKAP5 | 0.05 | 0.03 | lasso | 4 | 0.04 | 3.3e-03 | 14.7172 | 14.7 | 7.4e-49 | 0.71 | 0.27 | 0.38 | FALSE |
39 | GTEx | Esophagus Muscularis | ARHGAP1 | 0.07 | 0.08 | lasso | 3 | 0.07 | 6.1e-05 | 14.7172 | -15.7 | 1.5e-55 | -0.82 | 0.10 | 0.89 | FALSE |
40 | GTEx | Esophagus Muscularis | ATG13 | 0.12 | 0.08 | enet | 16 | 0.04 | 1.2e-03 | 10.1423 | -9.7 | 2.4e-22 | -0.56 | 0.77 | 0.12 | FALSE |
41 | GTEx | Heart Atrial Appendage | ACP2 | 0.10 | 0.12 | enet | 7 | 0.10 | 2.7e-05 | 5.6713 | -7.9 | 3.8e-15 | -0.36 | 0.34 | 0.03 | FALSE |
42 | GTEx | Heart Left Ventricle | MADD | 0.14 | 0.01 | enet | 17 | 0.05 | 7.0e-04 | 8.9207 | -6.6 | 4.2e-11 | -0.30 | 0.47 | 0.02 | FALSE |
43 | GTEx | Heart Left Ventricle | ACP2 | 0.11 | 0.06 | enet | 18 | 0.10 | 9.2e-06 | 8.9207 | -12.7 | 6.0e-37 | -0.60 | 0.72 | 0.12 | FALSE |
44 | GTEx | Heart Left Ventricle | ARHGAP1 | 0.06 | 0.03 | lasso | 2 | 0.02 | 2.1e-02 | 10.7147 | -12.9 | 3.0e-38 | -0.68 | 0.12 | 0.51 | FALSE |
45 | GTEx | Liver | PSMC3 | 0.15 | 0.09 | lasso | 4 | 0.07 | 5.9e-03 | -6.4031 | -6.3 | 3.3e-10 | -0.37 | 0.09 | 0.11 | FALSE |
46 | GTEx | Liver | ZNF408 | 0.10 | 0.09 | lasso | 3 | 0.08 | 3.5e-03 | 14.2821 | -14.3 | 2.1e-46 | -0.81 | 0.07 | 0.42 | FALSE |
47 | GTEx | Liver | ARHGAP1 | 0.12 | 0.05 | enet | 4 | 0.05 | 1.5e-02 | 8.9990 | -12.4 | 4.6e-35 | -0.62 | 0.06 | 0.43 | FALSE |
48 | GTEx | Lung | ACP2 | 0.04 | 0.03 | lasso | 2 | 0.04 | 4.3e-04 | 9.4900 | -10.3 | 1.1e-24 | -0.51 | 0.55 | 0.03 | FALSE |
49 | GTEx | Lung | ATG13 | 0.10 | 0.02 | enet | 15 | 0.02 | 1.6e-02 | 7.1257 | -9.1 | 1.3e-19 | -0.56 | 0.22 | 0.10 | FALSE |
50 | GTEx | Muscle Skeletal | FNBP4 | 0.05 | 0.03 | lasso | 5 | 0.04 | 5.0e-05 | 5.2109 | 5.5 | 4.8e-08 | 0.19 | 0.55 | 0.18 | TRUE |
51 | GTEx | Muscle Skeletal | ARHGAP1 | 0.03 | 0.05 | lasso | 2 | 0.04 | 1.2e-04 | 16.5087 | -16.5 | 3.2e-61 | -0.89 | 0.03 | 0.95 | FALSE |
52 | GTEx | Nerve Tibial | LRP4 | 0.28 | 0.24 | enet | 24 | 0.30 | 3.5e-21 | -9.3979 | 13.5 | 2.7e-41 | 0.69 | 0.97 | 0.03 | FALSE |
53 | GTEx | Nerve Tibial | C11orf49 | 0.17 | 0.01 | enet | 21 | 0.05 | 9.5e-05 | 8.7836 | 8.1 | 6.1e-16 | 0.43 | 0.41 | 0.11 | FALSE |
54 | GTEx | Nerve Tibial | PACSIN3 | 0.09 | 0.08 | lasso | 4 | 0.07 | 1.1e-05 | 7.1193 | 7.4 | 1.3e-13 | 0.45 | 0.80 | 0.01 | FALSE |
55 | GTEx | Nerve Tibial | SLC39A13 | 0.07 | 0.01 | enet | 14 | 0.02 | 7.6e-03 | 0.1447 | -5.6 | 2.7e-08 | -0.49 | 0.16 | 0.16 | FALSE |
56 | GTEx | Nerve Tibial | ARHGAP1 | 0.10 | 0.03 | enet | 14 | 0.05 | 9.7e-05 | 14.2821 | -16.7 | 7.6e-63 | -0.88 | 0.02 | 0.98 | FALSE |
57 | GTEx | Nerve Tibial | LRP4-AS1 | 0.23 | 0.16 | enet | 15 | 0.24 | 1.1e-16 | -9.3979 | 13.6 | 2.6e-42 | 0.65 | 0.99 | 0.01 | FALSE |
58 | GTEx | Ovary | PACSIN3 | 0.23 | 0.13 | lasso | 11 | 0.16 | 8.3e-05 | 7.1193 | 8.5 | 2.6e-17 | 0.42 | 0.08 | 0.06 | FALSE |
59 | GTEx | Ovary | ARHGAP1 | 0.25 | 0.09 | lasso | 16 | 0.18 | 3.8e-05 | 10.3093 | -15.5 | 3.0e-54 | -0.79 | 0.15 | 0.51 | FALSE |
60 | GTEx | Pancreas | LRP4 | 0.11 | 0.10 | enet | 16 | 0.14 | 1.8e-06 | 17.2729 | -17.2 | 1.3e-66 | -0.83 | 0.03 | 0.97 | FALSE |
61 | GTEx | Pancreas | ARHGAP1 | 0.09 | 0.06 | lasso | 7 | 0.04 | 6.4e-03 | 16.5087 | -16.0 | 2.8e-57 | -0.87 | 0.04 | 0.81 | FALSE |
62 | GTEx | Pancreas | LRP4-AS1 | 0.10 | 0.08 | lasso | 6 | 0.12 | 1.4e-05 | 17.2729 | -17.0 | 6.8e-65 | -0.87 | 0.03 | 0.96 | TRUE |
63 | GTEx | Pituitary | MADD | 0.42 | 0.32 | lasso | 6 | 0.39 | 8.9e-11 | -6.7596 | 5.5 | 4.7e-08 | 0.15 | 0.64 | 0.04 | FALSE |
64 | GTEx | Prostate | CELF1 | 0.17 | 0.16 | lasso | 2 | 0.12 | 6.2e-04 | 14.8000 | 14.8 | 1.5e-49 | 0.63 | 0.08 | 0.61 | FALSE |
65 | GTEx | Prostate | ZNF408 | 0.19 | 0.10 | lasso | 2 | 0.10 | 1.6e-03 | 14.7305 | -15.1 | 1.5e-51 | -0.70 | 0.14 | 0.08 | FALSE |
66 | GTEx | Skin Not Sun Exposed Suprapubic | LRP4 | 0.13 | 0.00 | lasso | 7 | 0.02 | 3.5e-02 | 17.0247 | 8.2 | 2.9e-16 | 0.61 | 0.13 | 0.06 | FALSE |
67 | GTEx | Skin Not Sun Exposed Suprapubic | DDB2 | 0.07 | 0.02 | enet | 13 | 0.04 | 3.5e-03 | 9.4900 | 14.3 | 2.9e-46 | 0.74 | 0.13 | 0.20 | FALSE |
68 | GTEx | Skin Not Sun Exposed Suprapubic | PACSIN3 | 0.11 | 0.05 | lasso | 3 | 0.10 | 3.4e-06 | 7.1193 | 12.4 | 1.9e-35 | 0.67 | 0.56 | 0.14 | FALSE |
69 | GTEx | Skin Not Sun Exposed Suprapubic | SLC39A13 | 0.07 | 0.11 | lasso | 2 | 0.10 | 5.2e-06 | 5.2109 | 5.3 | 1.1e-07 | 0.27 | 0.35 | 0.09 | FALSE |
70 | GTEx | Skin Not Sun Exposed Suprapubic | C1QTNF4 | 0.32 | 0.18 | enet | 33 | 0.20 | 5.2e-11 | -0.6182 | -5.2 | 2.2e-07 | -0.04 | 1.00 | 0.00 | FALSE |
71 | GTEx | Skin Not Sun Exposed Suprapubic | ARHGAP1 | 0.06 | 0.01 | lasso | 9 | 0.00 | 2.8e-01 | 14.7538 | -17.0 | 1.0e-64 | -0.84 | 0.13 | 0.28 | FALSE |
72 | GTEx | Skin Not Sun Exposed Suprapubic | ATG13 | 0.12 | 0.07 | lasso | 5 | 0.06 | 3.3e-04 | 10.3522 | -10.4 | 1.6e-25 | -0.54 | 0.89 | 0.01 | FALSE |
73 | GTEx | Skin Sun Exposed Lower leg | DDB2 | 0.08 | 0.10 | lasso | 4 | 0.10 | 5.8e-09 | 17.0287 | 16.9 | 1.9e-64 | 0.77 | 0.88 | 0.11 | FALSE |
74 | GTEx | Skin Sun Exposed Lower leg | ACP2 | 0.16 | 0.14 | enet | 15 | 0.15 | 1.8e-12 | 8.3771 | -9.9 | 3.5e-23 | -0.58 | 1.00 | 0.00 | FALSE |
75 | GTEx | Skin Sun Exposed Lower leg | PACSIN3 | 0.17 | 0.11 | lasso | 4 | 0.12 | 5.5e-10 | 7.1193 | 12.5 | 7.4e-36 | 0.67 | 0.98 | 0.02 | FALSE |
76 | GTEx | Skin Sun Exposed Lower leg | ARHGAP1 | 0.08 | 0.01 | lasso | 5 | 0.02 | 1.4e-02 | 16.5087 | -18.0 | 2.2e-72 | -0.91 | 0.03 | 0.90 | TRUE |
77 | GTEx | Skin Sun Exposed Lower leg | ATG13 | 0.08 | 0.05 | lasso | 4 | 0.05 | 5.1e-05 | 10.1000 | -9.6 | 5.7e-22 | -0.56 | 0.89 | 0.02 | FALSE |
78 | GTEx | Spleen | LRP4 | 0.15 | 0.14 | lasso | 5 | 0.12 | 6.5e-04 | 9.0414 | -9.1 | 1.4e-19 | -0.40 | 0.15 | 0.15 | FALSE |
79 | GTEx | Spleen | ACP2 | 0.19 | -0.01 | lasso | 5 | 0.04 | 4.1e-02 | 11.1403 | -12.1 | 1.8e-33 | -0.58 | 0.11 | 0.14 | FALSE |
80 | GTEx | Spleen | PTPRJ | 0.22 | 0.05 | lasso | 5 | 0.03 | 7.5e-02 | -6.0819 | -5.9 | 3.8e-09 | 0.01 | 0.07 | 0.07 | FALSE |
81 | GTEx | Spleen | PACSIN3 | 0.54 | 0.47 | lasso | 1 | 0.45 | 7.2e-13 | 6.6770 | 6.7 | 2.4e-11 | 0.42 | 1.00 | 0.00 | FALSE |
82 | GTEx | Testis | NR1H3 | 0.10 | 0.10 | lasso | 6 | 0.08 | 2.9e-04 | 10.7470 | -10.3 | 8.9e-25 | -0.53 | 0.61 | 0.03 | FALSE |
83 | GTEx | Testis | LRP4 | 0.17 | 0.00 | lasso | 3 | -0.01 | 7.8e-01 | 14.5437 | -11.6 | 5.6e-31 | -0.61 | 0.04 | 0.10 | FALSE |
84 | GTEx | Testis | C11orf49 | 0.57 | 0.45 | enet | 15 | 0.46 | 8.1e-23 | -9.3981 | -7.5 | 7.2e-14 | -0.40 | 1.00 | 0.00 | FALSE |
85 | GTEx | Testis | C1QTNF4 | 0.14 | 0.12 | lasso | 4 | 0.11 | 1.6e-05 | -3.0839 | -5.4 | 7.6e-08 | -0.12 | 0.81 | 0.04 | FALSE |
86 | GTEx | Thyroid | ACP2 | 0.19 | 0.14 | lasso | 4 | 0.12 | 3.0e-09 | 8.6314 | -9.2 | 2.9e-20 | -0.40 | 1.00 | 0.00 | FALSE |
87 | GTEx | Thyroid | C11orf49 | 0.09 | 0.05 | lasso | 3 | 0.04 | 3.0e-04 | 9.0414 | -9.0 | 2.6e-19 | -0.40 | 0.90 | 0.01 | FALSE |
88 | GTEx | Thyroid | PACSIN3 | 0.14 | 0.09 | lasso | 3 | 0.09 | 2.9e-07 | 7.1193 | 10.8 | 2.2e-27 | 0.60 | 0.95 | 0.03 | FALSE |
89 | GTEx | Uterus | C11orf49 | 0.24 | 0.24 | lasso | 13 | 0.24 | 1.3e-05 | 8.7029 | -8.8 | 9.0e-19 | -0.40 | 0.14 | 0.06 | FALSE |
90 | METSIM | Adipose | ACP2 | 0.05 | 0.04 | blup | 302 | 0.06 | 1.7e-09 | 0.0947 | -8.5 | 1.5e-17 | -0.52 | 0.98 | 0.02 | FALSE |
91 | METSIM | Adipose | ARHGAP1 | 0.08 | 0.02 | enet | 23 | 0.06 | 3.6e-09 | 18.0607 | -12.9 | 5.1e-38 | -0.76 | 0.00 | 1.00 | FALSE |
92 | METSIM | Adipose | DDB2 | 0.03 | 0.03 | lasso | 2 | 0.02 | 1.9e-04 | 12.7364 | -13.3 | 1.5e-40 | -0.57 | 0.64 | 0.24 | FALSE |
93 | METSIM | Adipose | MADD | 0.05 | 0.02 | bslmm | 315 | 0.02 | 8.3e-04 | 1.6189 | 6.0 | 2.4e-09 | 0.52 | 0.23 | 0.13 | FALSE |
94 | METSIM | Adipose | NR1H3 | 0.03 | 0.03 | lasso | 6 | 0.04 | 4.7e-06 | -3.3474 | 7.8 | 8.8e-15 | 0.37 | 0.58 | 0.20 | FALSE |
95 | METSIM | Adipose | RAPSN | 0.11 | 0.01 | enet | 21 | 0.06 | 7.9e-09 | 15.3750 | 10.5 | 7.3e-26 | 0.52 | 0.27 | 0.73 | FALSE |
96 | NTR | Blood | ACP2 | 0.01 | 0.00 | enet | 7 | 0.01 | 2.5e-03 | 7.3553 | -7.9 | 2.7e-15 | -0.39 | 0.48 | 0.01 | FALSE |
97 | NTR | Blood | DDB2 | 0.01 | 0.00 | lasso | 7 | 0.01 | 2.2e-03 | 11.1403 | -11.6 | 2.7e-31 | -0.50 | 0.32 | 0.03 | FALSE |
98 | NTR | Blood | MADD | 0.01 | 0.01 | enet | 8 | 0.01 | 4.7e-03 | 2.9690 | 8.6 | 9.4e-18 | 0.48 | 0.16 | 0.11 | FALSE |
99 | ROSMAP | Brain Pre-frontal Cortex | NR1H3 | 0.06 | 0.01 | blup | 302 | 0.04 | 1.5e-05 | 7.3553 | 10.6 | 2.1e-26 | 0.61 | 0.33 | 0.62 | FALSE |
100 | ROSMAP | Brain Pre-frontal Cortex | PTPMT1 | 0.03 | 0.02 | blup | 270 | 0.02 | 3.8e-04 | 5.2109 | 6.3 | 2.2e-10 | 0.37 | 0.60 | 0.05 | FALSE |
101 | ROSMAP | Brain Pre-frontal Cortex | LRP4 | 0.04 | 0.06 | blup | 286 | 0.05 | 3.5e-07 | 10.4227 | 13.6 | 5.1e-42 | 0.64 | 0.86 | 0.13 | FALSE |
102 | ROSMAP | Brain Pre-frontal Cortex | DDB2 | 0.04 | 0.03 | enet | 15 | 0.03 | 7.1e-05 | 14.7721 | -12.4 | 3.4e-35 | -0.46 | 0.91 | 0.02 | FALSE |
103 | ROSMAP | Brain Pre-frontal Cortex | ACP2 | 0.03 | 0.00 | blup | 295 | 0.02 | 1.5e-03 | -0.0864 | -10.0 | 1.3e-23 | -0.57 | 0.38 | 0.11 | FALSE |
104 | ROSMAP | Brain Pre-frontal Cortex | C11orf49 | 0.02 | 0.02 | blup | 322 | 0.02 | 3.3e-04 | 17.5366 | 16.9 | 2.9e-64 | 0.83 | 0.12 | 0.87 | FALSE |
105 | ROSMAP | Brain Pre-frontal Cortex | PACSIN3 | 0.11 | 0.00 | bslmm | 292 | 0.04 | 1.8e-06 | -9.4397 | 9.3 | 8.8e-21 | 0.43 | 0.14 | 0.16 | FALSE |
106 | ROSMAP | Brain Pre-frontal Cortex | ZNF408 | 0.04 | 0.02 | blup | 243 | 0.03 | 5.0e-05 | 14.8103 | -11.5 | 1.2e-30 | -0.52 | 0.83 | 0.09 | FALSE |
107 | ROSMAP | Brain Pre-frontal Cortex | ATG13 | 0.05 | 0.02 | bslmm | 266 | 0.03 | 1.3e-04 | 10.0346 | -7.4 | 1.4e-13 | -0.38 | 0.45 | 0.05 | FALSE |
108 | YFS | Blood | CKAP5 | 0.01 | 0.01 | bslmm | 291 | 0.01 | 3.6e-03 | 12.0505 | -7.2 | 4.7e-13 | -0.49 | 0.03 | 0.18 | FALSE |
109 | YFS | Blood | PHF21A | 0.01 | 0.01 | bslmm | 385 | 0.00 | 1.9e-02 | 3.9584 | 6.4 | 1.4e-10 | 0.27 | 0.65 | 0.06 | FALSE |
110 | YFS | Blood | PSMC3 | 0.02 | 0.01 | blup | 289 | 0.01 | 2.8e-05 | -0.5165 | -6.5 | 7.3e-11 | -0.48 | 0.54 | 0.21 | FALSE |
111 | YFS | Blood | PTPMT1 | 0.03 | 0.01 | lasso | 5 | 0.01 | 3.2e-04 | -3.0829 | -5.6 | 2.0e-08 | -0.02 | 0.70 | 0.01 | TRUE |
112 | YFS | Blood | SPI1 | 0.65 | 0.18 | enet | 75 | 0.27 | 1.6e-87 | 0.0002 | -5.3 | 8.6e-08 | 0.00 | 1.00 | 0.00 | FALSE |
113 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ARHGAP1 | 0.02 | 0.01 | blup | 26 | 0.02 | 2.7e-04 | 16.5087 | -15.1 | 2.2e-51 | -0.82 | 0.00 | 0.95 | FALSE |
114 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C11orf49 | 0.05 | 0.00 | blup | 90 | 0.02 | 3.0e-04 | 10.8748 | 11.4 | 3.5e-30 | 0.56 | 0.14 | 0.45 | TRUE |
115 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ACP2 | 0.02 | 0.03 | lasso | 1 | 0.02 | 1.5e-03 | 8.6314 | -8.6 | 6.1e-18 | -0.36 | 0.08 | 0.07 | FALSE |
116 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ACP2 | 0.03 | 0.03 | blup | 44 | 0.04 | 3.5e-05 | 10.7470 | -11.5 | 8.7e-31 | -0.57 | 0.40 | 0.49 | FALSE |
117 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MDK | 0.03 | 0.02 | lasso | 3 | 0.02 | 2.3e-03 | 10.1423 | -8.3 | 1.5e-16 | -0.50 | 0.05 | 0.80 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PTPMT1 | 0.07 | 0.03 | enet | 4 | 0.03 | 6.8e-04 | -7.3315 | -6.8 | 9.7e-12 | -0.08 | 0.00 | 0.98 | TRUE |
119 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CKAP5 | 0.09 | 0.01 | blup | 58 | 0.04 | 2.9e-03 | 14.8011 | 11.8 | 6.1e-32 | 0.61 | 0.08 | 0.51 | FALSE |
120 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | DDB2 | 0.02 | 0.03 | lasso | 1 | 0.02 | 1.0e-03 | 9.3868 | 9.4 | 6.2e-21 | 0.51 | 0.13 | 0.21 | FALSE |
121 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ARHGAP1 | 0.11 | 0.01 | blup | 26 | 0.03 | 2.7e-02 | 6.8366 | -13.6 | 5.3e-42 | -0.78 | 0.01 | 0.56 | FALSE |
122 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ARHGAP1 | 0.05 | 0.04 | blup | 26 | 0.05 | 1.1e-05 | 16.5087 | -15.4 | 2.6e-53 | -0.83 | 0.00 | 1.00 | FALSE |
123 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ZNF408 | 0.02 | 0.00 | blup | 27 | 0.02 | 4.3e-03 | 14.6826 | -15.9 | 1.3e-56 | -0.85 | 0.01 | 0.77 | FALSE |
124 | The Cancer Genome Atlas | Soft Tissue Sarcoma | ACP2 | 0.08 | 0.06 | enet | 7 | 0.06 | 1.6e-04 | 12.7364 | -12.6 | 2.4e-36 | -0.56 | 0.01 | 0.62 | FALSE |
125 | The Cancer Genome Atlas | Stomach Adenocarcinoma | HARBI1 | 0.05 | 0.02 | blup | 12 | 0.02 | 1.5e-02 | 10.3545 | 11.1 | 2.1e-28 | 0.58 | 0.01 | 0.77 | FALSE |
126 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | MADD | 0.21 | 0.04 | blup | 64 | 0.07 | 1.3e-03 | 8.7836 | -7.1 | 1.3e-12 | -0.17 | 0.03 | 0.59 | FALSE |
127 | The Cancer Genome Atlas | Thyroid Carcinoma | DDB2 | 0.06 | 0.04 | enet | 17 | 0.03 | 1.3e-03 | 8.9431 | 9.9 | 3.8e-23 | 0.46 | 0.52 | 0.12 | FALSE |
128 | The Cancer Genome Atlas | Thyroid Carcinoma | MADD | 0.07 | 0.00 | enet | 11 | 0.03 | 6.7e-04 | 7.3553 | -5.2 | 2.3e-07 | -0.21 | 0.04 | 0.34 | FALSE |
129 | The Cancer Genome Atlas | Thyroid Carcinoma | PACSIN3 | 0.09 | 0.01 | enet | 5 | 0.03 | 3.1e-04 | 7.8542 | 12.1 | 6.9e-34 | 0.60 | 0.03 | 0.71 | TRUE |
130 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | ZNF408 | 0.27 | 0.01 | blup | 27 | 0.09 | 1.5e-03 | 11.2657 | -12.3 | 1.6e-34 | -0.56 | 0.02 | 0.20 | FALSE |