Best TWAS P=3.15e-21 · Best GWAS P=1.16e-23 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | LIN52 | 0.06 | 0.03 | blup | 456 | 0.05 | 2.0e-06 | -6.404 | -7.3 | 2.0e-13 | 0.01 | 0.87 | 0.01 | FALSE |
2 | GTEx | Adipose Subcutaneous | DCAF4 | 0.20 | 0.05 | lasso | 7 | 0.18 | 1.1e-14 | 6.110 | 8.6 | 9.7e-18 | -0.66 | 0.60 | 0.40 | FALSE |
3 | GTEx | Adipose Subcutaneous | COQ6 | 0.07 | 0.04 | lasso | 7 | 0.03 | 8.0e-04 | -5.948 | -5.5 | 3.0e-08 | 0.08 | 0.63 | 0.02 | FALSE |
4 | GTEx | Adipose Subcutaneous | ACOT1 | 0.33 | 0.04 | lasso | 8 | 0.05 | 8.2e-05 | 4.157 | 5.4 | 6.2e-08 | -0.30 | 0.75 | 0.09 | FALSE |
5 | GTEx | Adipose Subcutaneous | LIN52 | 0.14 | 0.20 | lasso | 4 | 0.19 | 2.8e-15 | -6.468 | -6.2 | 5.2e-10 | -0.04 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Visceral Omentum | PSEN1 | 0.11 | 0.02 | enet | 16 | 0.00 | 2.3e-01 | -4.822 | 6.7 | 2.1e-11 | -0.40 | 0.14 | 0.16 | FALSE |
7 | GTEx | Adipose Visceral Omentum | DCAF4 | 0.23 | 0.07 | enet | 30 | 0.13 | 4.3e-07 | 5.506 | 8.6 | 6.0e-18 | -0.48 | 0.37 | 0.58 | FALSE |
8 | GTEx | Adipose Visceral Omentum | ACOT1 | 0.18 | 0.07 | lasso | 6 | 0.06 | 3.8e-04 | 4.157 | 6.0 | 2.1e-09 | -0.41 | 0.06 | 0.91 | FALSE |
9 | GTEx | Adipose Visceral Omentum | LIN52 | 0.20 | 0.18 | lasso | 3 | 0.17 | 4.0e-09 | -6.402 | -6.4 | 1.6e-10 | -0.02 | 1.00 | 0.00 | FALSE |
10 | GTEx | Adipose Visceral Omentum | RP11-109N23.6 | 0.14 | 0.11 | enet | 15 | 0.13 | 2.2e-07 | -10.027 | 7.7 | 1.0e-14 | -0.81 | 0.00 | 1.00 | FALSE |
11 | GTEx | Adrenal Gland | ACOT1 | 0.30 | 0.04 | lasso | 7 | 0.10 | 2.7e-04 | 5.931 | 6.1 | 1.1e-09 | -0.33 | 0.17 | 0.22 | FALSE |
12 | GTEx | Adrenal Gland | LIN52 | 0.17 | 0.08 | enet | 15 | 0.10 | 1.3e-04 | -6.402 | -5.4 | 7.6e-08 | 0.01 | 0.71 | 0.02 | FALSE |
13 | GTEx | Adrenal Gland | RP11-109N23.6 | 0.18 | 0.06 | enet | 8 | 0.05 | 7.7e-03 | 5.192 | 5.3 | 9.1e-08 | -0.38 | 0.30 | 0.28 | FALSE |
14 | GTEx | Artery Aorta | DCAF4 | 0.22 | 0.06 | lasso | 9 | 0.24 | 3.9e-13 | 4.034 | 7.5 | 8.8e-14 | -0.59 | 0.38 | 0.50 | FALSE |
15 | GTEx | Artery Aorta | ACOT4 | 0.17 | 0.14 | lasso | 4 | 0.13 | 1.5e-07 | 5.468 | 6.2 | 4.8e-10 | -0.18 | 0.21 | 0.78 | FALSE |
16 | GTEx | Artery Aorta | LIN52 | 0.32 | 0.21 | lasso | 7 | 0.21 | 9.8e-12 | -6.352 | -6.6 | 3.5e-11 | 0.00 | 1.00 | 0.00 | FALSE |
17 | GTEx | Artery Tibial | DCAF4 | 0.23 | 0.10 | lasso | 9 | 0.24 | 5.1e-19 | 4.034 | 7.9 | 2.3e-15 | -0.57 | 0.98 | 0.02 | FALSE |
18 | GTEx | Artery Tibial | LIN52 | 0.19 | 0.21 | lasso | 6 | 0.19 | 5.5e-15 | -6.402 | -6.3 | 4.0e-10 | -0.04 | 1.00 | 0.00 | FALSE |
19 | GTEx | Artery Tibial | RP11-109N23.6 | 0.10 | 0.00 | enet | 11 | 0.01 | 1.0e-01 | 5.105 | 5.7 | 9.7e-09 | -0.27 | 0.08 | 0.33 | FALSE |
20 | GTEx | Brain Cerebellum | AC005484.5 | 0.16 | 0.18 | lasso | 6 | 0.17 | 1.2e-05 | -6.352 | -6.4 | 1.8e-10 | -0.03 | 0.29 | 0.05 | FALSE |
21 | GTEx | Brain Cortex | CCDC176 | 0.19 | -0.01 | enet | 9 | 0.02 | 1.1e-01 | -6.352 | -6.5 | 8.3e-11 | 0.02 | 0.08 | 0.05 | FALSE |
22 | GTEx | Brain Cortex | ZFYVE1 | 0.24 | 0.05 | lasso | 6 | 0.02 | 7.1e-02 | -5.732 | -6.4 | 1.9e-10 | 0.33 | 0.10 | 0.24 | FALSE |
23 | GTEx | Brain Cortex | ACOT4 | 0.27 | 0.08 | lasso | 5 | 0.14 | 1.2e-04 | 5.468 | 5.4 | 5.5e-08 | -0.19 | 0.08 | 0.53 | FALSE |
24 | GTEx | Brain Cortex | LIN52 | 0.22 | 0.03 | lasso | 1 | 0.05 | 1.9e-02 | -6.468 | -6.5 | 9.9e-11 | -0.03 | 0.20 | 0.06 | FALSE |
25 | GTEx | Brain Cortex | AC005484.5 | 0.16 | 0.02 | lasso | 7 | 0.01 | 2.0e-01 | -6.352 | -6.3 | 3.9e-10 | -0.01 | 0.09 | 0.06 | FALSE |
26 | GTEx | Brain Frontal Cortex BA9 | ACOT1 | 0.53 | 0.01 | enet | 31 | 0.17 | 3.2e-05 | -5.651 | 5.5 | 4.6e-08 | -0.31 | 0.10 | 0.12 | FALSE |
27 | GTEx | Brain Hypothalamus | ACOT4 | 0.20 | 0.01 | enet | 46 | 0.15 | 2.3e-04 | 2.862 | 6.6 | 5.7e-11 | -0.10 | 0.05 | 0.26 | TRUE |
28 | GTEx | Brain Hypothalamus | LIN52 | 0.21 | 0.04 | lasso | 7 | 0.06 | 1.5e-02 | -6.352 | -6.2 | 5.1e-10 | -0.02 | 0.09 | 0.05 | FALSE |
29 | GTEx | Brain Nucleus accumbens basal ganglia | ACOT4 | 0.17 | 0.02 | enet | 12 | 0.05 | 1.7e-02 | 7.087 | 6.4 | 1.5e-10 | -0.35 | 0.04 | 0.55 | FALSE |
30 | GTEx | Breast Mammary Tissue | DCAF4 | 0.24 | 0.10 | lasso | 6 | 0.18 | 1.2e-09 | 6.100 | 9.5 | 3.2e-21 | -0.63 | 0.77 | 0.17 | TRUE |
31 | GTEx | Breast Mammary Tissue | PTGR2 | 0.21 | 0.02 | enet | 26 | 0.02 | 5.1e-02 | 0.888 | 5.1 | 3.0e-07 | -0.07 | 0.13 | 0.05 | FALSE |
32 | GTEx | Breast Mammary Tissue | LIN52 | 0.15 | 0.09 | lasso | 7 | 0.06 | 3.9e-04 | -6.402 | -5.3 | 1.1e-07 | -0.02 | 0.82 | 0.01 | FALSE |
33 | GTEx | Breast Mammary Tissue | RP11-109N23.6 | 0.11 | 0.01 | enet | 26 | 0.05 | 1.7e-03 | 3.913 | 7.3 | 2.2e-13 | -0.38 | 0.45 | 0.30 | FALSE |
34 | GTEx | Breast Mammary Tissue (Female) | DCAF4 | 0.16 | 0.07 | lasso | 4 | 0.03 | 4.4e-02 | -5.979 | 6.3 | 3.5e-10 | -0.41 | 0.07 | 0.37 | FALSE |
35 | GTEx | Breast Mammary Tissue (Female) | LIN52 | 0.06 | 0.00 | lasso | 5 | 0.00 | 3.2e-01 | -6.404 | -6.4 | 1.5e-10 | -0.01 | 0.06 | 0.05 | FALSE |
36 | GTEx | Breast Mammary Tissue (Female) | RP11-109N23.6 | 0.18 | -0.01 | lasso | 7 | 0.00 | 3.9e-01 | -7.288 | 8.1 | 4.3e-16 | -0.67 | 0.07 | 0.49 | FALSE |
37 | GTEx | Cells EBV-transformed lymphocytes | DCAF4 | 0.23 | 0.03 | enet | 18 | 0.05 | 7.4e-03 | 4.037 | 7.4 | 9.7e-14 | -0.55 | 0.07 | 0.20 | FALSE |
38 | GTEx | Cells EBV-transformed lymphocytes | ACOT4 | 0.17 | 0.19 | enet | 10 | 0.12 | 1.1e-04 | 7.087 | 7.7 | 1.8e-14 | -0.29 | 0.02 | 0.95 | FALSE |
39 | GTEx | Cells EBV-transformed lymphocytes | LIN52 | 0.33 | 0.31 | lasso | 7 | 0.30 | 2.1e-10 | -4.726 | -5.3 | 1.3e-07 | -0.02 | 1.00 | 0.00 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | DNAL1 | 0.11 | 0.00 | enet | 15 | 0.01 | 6.0e-02 | 0.069 | -6.8 | 1.1e-11 | 0.29 | 0.04 | 0.92 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | LIN52 | 0.08 | 0.07 | lasso | 4 | 0.07 | 4.6e-06 | -6.468 | -6.0 | 2.0e-09 | -0.03 | 0.94 | 0.00 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | RP5-1021I20.5 | 0.07 | 0.01 | lasso | 4 | 0.02 | 1.2e-02 | -6.259 | -6.8 | 1.1e-11 | 0.01 | 0.15 | 0.03 | TRUE |
43 | GTEx | Colon Sigmoid | DCAF4 | 0.30 | 0.10 | lasso | 9 | 0.11 | 1.3e-04 | 6.235 | 7.2 | 8.3e-13 | -0.39 | 0.11 | 0.39 | FALSE |
44 | GTEx | Colon Transverse | DCAF4 | 0.26 | 0.27 | lasso | 10 | 0.27 | 2.7e-13 | 6.110 | 7.2 | 6.9e-13 | -0.49 | 1.00 | 0.00 | FALSE |
45 | GTEx | Colon Transverse | ZNF410 | 0.19 | 0.15 | enet | 33 | 0.17 | 1.6e-08 | 4.526 | 6.1 | 1.4e-09 | -0.14 | 0.98 | 0.01 | FALSE |
46 | GTEx | Colon Transverse | RP11-109N23.6 | 0.16 | 0.01 | enet | 19 | 0.02 | 5.6e-02 | 3.965 | 7.8 | 5.5e-15 | -0.68 | 0.06 | 0.88 | FALSE |
47 | GTEx | Esophagus Gastroesophageal Junction | DCAF4 | 0.18 | 0.01 | enet | 10 | 0.06 | 3.0e-03 | 6.235 | 8.2 | 2.7e-16 | -0.46 | 0.05 | 0.63 | FALSE |
48 | GTEx | Esophagus Gastroesophageal Junction | ACOT1 | 0.35 | 0.08 | lasso | 5 | 0.14 | 1.0e-05 | 4.157 | 5.5 | 4.9e-08 | -0.29 | 0.14 | 0.17 | FALSE |
49 | GTEx | Esophagus Gastroesophageal Junction | RP11-109N23.6 | 0.17 | 0.01 | lasso | 12 | 0.00 | 2.6e-01 | -6.425 | 8.8 | 1.6e-18 | -0.58 | 0.05 | 0.58 | FALSE |
50 | GTEx | Esophagus Mucosa | DCAF4 | 0.30 | 0.19 | enet | 35 | 0.23 | 1.3e-15 | 6.235 | 9.1 | 1.3e-19 | -0.51 | 0.99 | 0.01 | FALSE |
51 | GTEx | Esophagus Mucosa | ZFYVE1 | 0.10 | 0.00 | lasso | 7 | 0.00 | 2.0e-01 | 6.235 | 8.8 | 1.2e-18 | -0.67 | 0.10 | 0.68 | FALSE |
52 | GTEx | Esophagus Mucosa | ACOT4 | 0.13 | 0.04 | lasso | 6 | 0.03 | 5.2e-03 | -3.981 | 6.1 | 1.2e-09 | -0.26 | 0.10 | 0.62 | FALSE |
53 | GTEx | Esophagus Mucosa | ACOT1 | 0.24 | 0.14 | lasso | 6 | 0.10 | 4.7e-07 | 6.206 | 6.5 | 1.0e-10 | -0.36 | 0.92 | 0.07 | FALSE |
54 | GTEx | Esophagus Mucosa | LIN52 | 0.13 | 0.07 | lasso | 3 | 0.07 | 1.6e-05 | -6.352 | -6.4 | 2.0e-10 | -0.01 | 0.96 | 0.00 | FALSE |
55 | GTEx | Esophagus Mucosa | RP11-109N23.6 | 0.22 | 0.11 | lasso | 4 | 0.15 | 5.1e-10 | 3.978 | 6.0 | 2.7e-09 | -0.51 | 0.89 | 0.11 | FALSE |
56 | GTEx | Esophagus Muscularis | ACOT1 | 0.32 | 0.08 | lasso | 8 | 0.11 | 3.3e-07 | 6.206 | 5.6 | 2.0e-08 | -0.42 | 0.90 | 0.07 | FALSE |
57 | GTEx | Esophagus Muscularis | LIN52 | 0.08 | 0.00 | lasso | 4 | 0.00 | 6.3e-01 | -6.483 | -7.1 | 1.4e-12 | 0.00 | 0.15 | 0.04 | FALSE |
58 | GTEx | Heart Atrial Appendage | ACOT1 | 0.55 | 0.22 | enet | 36 | 0.25 | 1.9e-11 | -5.092 | 5.4 | 6.0e-08 | -0.31 | 0.03 | 0.97 | FALSE |
59 | GTEx | Heart Atrial Appendage | LIN52 | 0.15 | 0.10 | enet | 12 | 0.12 | 4.3e-06 | -6.483 | -6.3 | 2.3e-10 | 0.01 | 0.92 | 0.01 | FALSE |
60 | GTEx | Heart Left Ventricle | LIN52 | 0.08 | 0.00 | enet | 4 | 0.01 | 8.5e-02 | 2.982 | -5.7 | 1.0e-08 | -0.01 | 0.09 | 0.05 | FALSE |
61 | GTEx | Lung | DCAF4 | 0.32 | 0.15 | lasso | 8 | 0.25 | 5.6e-19 | 6.235 | 8.0 | 1.5e-15 | -0.50 | 1.00 | 0.00 | FALSE |
62 | GTEx | Lung | COQ6 | 0.11 | 0.04 | lasso | 8 | 0.04 | 5.9e-04 | -5.948 | -5.6 | 1.9e-08 | 0.05 | 0.34 | 0.03 | FALSE |
63 | GTEx | Lung | LIN52 | 0.17 | 0.22 | lasso | 6 | 0.22 | 3.6e-17 | -6.352 | -6.2 | 4.7e-10 | -0.03 | 1.00 | 0.00 | FALSE |
64 | GTEx | Lung | RP11-109N23.6 | 0.10 | 0.02 | enet | 24 | 0.03 | 1.5e-03 | 5.192 | 6.3 | 3.9e-10 | -0.51 | 0.46 | 0.29 | FALSE |
65 | GTEx | Muscle Skeletal | ACOT2 | 0.10 | 0.07 | enet | 12 | 0.07 | 4.8e-07 | 4.157 | -5.5 | 3.9e-08 | 0.33 | 0.92 | 0.00 | FALSE |
66 | GTEx | Muscle Skeletal | LIN52 | 0.09 | 0.04 | enet | 4 | 0.01 | 1.9e-02 | -6.402 | -6.4 | 1.5e-10 | -0.03 | 0.60 | 0.01 | FALSE |
67 | GTEx | Nerve Tibial | DCAF4 | 0.29 | 0.05 | lasso | 10 | 0.19 | 1.2e-13 | 6.235 | 5.9 | 4.8e-09 | -0.33 | 0.98 | 0.01 | FALSE |
68 | GTEx | Nerve Tibial | LIN52 | 0.30 | 0.33 | lasso | 7 | 0.36 | 1.3e-26 | -6.402 | -6.4 | 1.6e-10 | -0.01 | 1.00 | 0.00 | FALSE |
69 | GTEx | Nerve Tibial | RP11-109N23.6 | 0.07 | 0.08 | lasso | 2 | 0.11 | 6.2e-08 | 4.912 | 5.4 | 6.0e-08 | -0.23 | 0.33 | 0.17 | FALSE |
70 | GTEx | Pancreas | DCAF4 | 0.20 | 0.15 | lasso | 4 | 0.14 | 2.4e-06 | 6.235 | 6.6 | 4.2e-11 | -0.32 | 0.51 | 0.04 | FALSE |
71 | GTEx | Pancreas | ACOT4 | 0.34 | 0.18 | lasso | 11 | 0.11 | 2.2e-05 | 5.468 | 5.5 | 2.9e-08 | -0.21 | 0.12 | 0.87 | FALSE |
72 | GTEx | Pancreas | LIN52 | 0.19 | 0.21 | lasso | 3 | 0.17 | 7.7e-08 | -6.468 | -6.5 | 1.0e-10 | -0.03 | 0.99 | 0.00 | FALSE |
73 | GTEx | Pituitary | ACOT4 | 0.25 | 0.02 | lasso | 4 | 0.01 | 2.1e-01 | 8.200 | 8.1 | 5.6e-16 | -0.36 | 0.02 | 0.75 | FALSE |
74 | GTEx | Pituitary | ACOT1 | 0.53 | 0.29 | lasso | 9 | 0.25 | 7.1e-07 | -3.981 | 5.5 | 3.5e-08 | -0.20 | 0.11 | 0.68 | FALSE |
75 | GTEx | Skin Not Sun Exposed Suprapubic | ZFYVE1 | 0.14 | 0.08 | lasso | 3 | 0.06 | 2.6e-04 | -6.290 | 6.8 | 9.2e-12 | -0.63 | 0.23 | 0.31 | FALSE |
76 | GTEx | Skin Not Sun Exposed Suprapubic | LIN52 | 0.15 | 0.07 | enet | 12 | 0.10 | 3.9e-06 | -6.468 | -5.4 | 7.1e-08 | -0.02 | 0.85 | 0.01 | FALSE |
77 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-109N23.6 | 0.13 | 0.06 | lasso | 5 | 0.07 | 7.3e-05 | 4.140 | 5.4 | 7.1e-08 | -0.52 | 0.39 | 0.57 | FALSE |
78 | GTEx | Skin Sun Exposed Lower leg | PAPLN | 0.30 | 0.11 | lasso | 5 | 0.17 | 5.2e-14 | 4.044 | -5.5 | 3.9e-08 | 0.51 | 0.99 | 0.01 | FALSE |
79 | GTEx | Skin Sun Exposed Lower leg | DCAF4 | 0.29 | 0.12 | enet | 32 | 0.25 | 1.9e-20 | 6.235 | 7.1 | 1.0e-12 | -0.46 | 1.00 | 0.00 | FALSE |
80 | GTEx | Skin Sun Exposed Lower leg | ACOT2 | 0.23 | 0.09 | lasso | 9 | 0.10 | 1.4e-08 | -3.981 | -5.7 | 1.2e-08 | 0.14 | 0.83 | 0.08 | FALSE |
81 | GTEx | Skin Sun Exposed Lower leg | LIN52 | 0.17 | 0.22 | lasso | 8 | 0.21 | 4.1e-17 | -6.352 | -6.4 | 1.7e-10 | -0.02 | 1.00 | 0.00 | FALSE |
82 | GTEx | Skin Sun Exposed Lower leg | RP4-647C14.3 | 0.25 | 0.11 | lasso | 6 | 0.13 | 7.3e-11 | 3.959 | -5.7 | 1.4e-08 | 0.52 | 0.88 | 0.12 | FALSE |
83 | GTEx | Skin Sun Exposed Lower leg | RP11-109N23.6 | 0.12 | 0.07 | enet | 19 | 0.12 | 4.7e-10 | 5.192 | 7.5 | 5.6e-14 | -0.62 | 0.24 | 0.76 | FALSE |
84 | GTEx | Spleen | DCAF4 | 0.47 | 0.12 | enet | 10 | 0.19 | 1.5e-05 | 6.110 | 9.0 | 3.3e-19 | -0.55 | 0.37 | 0.48 | FALSE |
85 | GTEx | Spleen | NUMB | 0.46 | -0.01 | enet | 28 | 0.09 | 3.2e-03 | 5.345 | 8.0 | 1.2e-15 | -0.32 | 0.10 | 0.13 | FALSE |
86 | GTEx | Stomach | DCAF4 | 0.22 | 0.07 | enet | 27 | 0.14 | 4.7e-07 | 6.235 | 6.6 | 4.7e-11 | -0.45 | 0.47 | 0.06 | FALSE |
87 | GTEx | Stomach | LIN52 | 0.11 | 0.08 | lasso | 5 | 0.12 | 3.9e-06 | -6.468 | -7.3 | 3.0e-13 | 0.04 | 0.64 | 0.02 | FALSE |
88 | GTEx | Stomach | RP11-109N23.6 | 0.09 | 0.00 | enet | 15 | 0.00 | 6.7e-01 | -7.298 | 8.8 | 9.0e-19 | -0.78 | 0.08 | 0.62 | FALSE |
89 | GTEx | Testis | CCDC176 | 0.15 | 0.07 | lasso | 12 | 0.05 | 1.9e-03 | -6.584 | -6.6 | 5.2e-11 | -0.04 | 0.71 | 0.03 | FALSE |
90 | GTEx | Testis | ACOT4 | 0.12 | 0.12 | lasso | 2 | 0.09 | 5.5e-05 | 5.402 | 5.5 | 3.9e-08 | -0.22 | 0.30 | 0.55 | FALSE |
91 | GTEx | Testis | ACOT1 | 0.65 | 0.04 | lasso | 15 | 0.01 | 8.1e-02 | 4.157 | 6.8 | 8.4e-12 | -0.36 | 0.09 | 0.24 | FALSE |
92 | GTEx | Testis | LIN52 | 0.53 | 0.51 | lasso | 13 | 0.48 | 6.7e-24 | -6.468 | -6.5 | 1.1e-10 | -0.02 | 1.00 | 0.00 | FALSE |
93 | GTEx | Testis | AC005484.5 | 0.16 | 0.09 | lasso | 10 | 0.08 | 1.8e-04 | -6.484 | -6.3 | 2.8e-10 | -0.05 | 0.81 | 0.02 | FALSE |
94 | GTEx | Thyroid | CCDC176 | 0.14 | 0.05 | enet | 35 | 0.09 | 1.2e-07 | -6.586 | -6.1 | 1.3e-09 | -0.03 | 0.99 | 0.00 | FALSE |
95 | GTEx | Thyroid | COQ6 | 0.16 | 0.16 | lasso | 9 | 0.14 | 6.6e-11 | 4.664 | -5.1 | 2.6e-07 | 0.08 | 1.00 | 0.00 | FALSE |
96 | GTEx | Thyroid | ACOT4 | 0.19 | 0.18 | lasso | 3 | 0.18 | 2.3e-13 | 5.468 | 5.5 | 4.6e-08 | -0.21 | 1.00 | 0.00 | FALSE |
97 | GTEx | Thyroid | ENTPD5 | 0.06 | 0.05 | lasso | 5 | 0.04 | 4.0e-04 | -4.666 | -5.6 | 2.8e-08 | 0.07 | 0.36 | 0.05 | FALSE |
98 | GTEx | Thyroid | RP4-647C14.3 | 0.10 | 0.04 | enet | 31 | 0.03 | 1.1e-03 | 4.098 | 5.9 | 4.2e-09 | -0.26 | 0.66 | 0.07 | FALSE |
99 | GTEx | Thyroid | RP11-109N23.6 | 0.10 | 0.15 | lasso | 1 | 0.14 | 5.3e-11 | 5.192 | 5.2 | 2.1e-07 | -0.48 | 1.00 | 0.00 | TRUE |
100 | GTEx | Thyroid | AC005484.5 | 0.11 | 0.06 | enet | 23 | 0.09 | 2.2e-07 | -6.352 | -7.8 | 4.9e-15 | -0.01 | 0.97 | 0.00 | TRUE |
101 | GTEx | Whole Blood | DCAF4 | 0.08 | 0.04 | enet | 12 | 0.06 | 5.0e-06 | 6.235 | 7.5 | 7.1e-14 | -0.53 | 0.57 | 0.18 | FALSE |
102 | GTEx | Whole Blood | RP5-1021I20.4 | 0.08 | 0.01 | lasso | 6 | 0.00 | 1.4e-01 | 6.356 | 6.2 | 6.3e-10 | -0.14 | 0.07 | 0.46 | FALSE |
103 | METSIM | Adipose | DCAF4 | 0.21 | 0.15 | bslmm | 452 | 0.21 | 3.0e-30 | 6.100 | 8.5 | 2.1e-17 | -0.59 | 1.00 | 0.00 | FALSE |
104 | METSIM | Adipose | HEATR4 | 0.11 | 0.02 | bslmm | 373 | 0.07 | 3.9e-10 | 4.157 | -5.4 | 7.0e-08 | 0.37 | 0.60 | 0.28 | FALSE |
105 | METSIM | Adipose | LIN52 | 0.08 | 0.08 | lasso | 3 | 0.08 | 1.5e-11 | -6.352 | -6.3 | 2.9e-10 | -0.03 | 1.00 | 0.00 | FALSE |
106 | NTR | Blood | DCAF4 | 0.04 | 0.03 | lasso | 6 | 0.03 | 6.5e-09 | 6.235 | 6.3 | 3.0e-10 | -0.34 | 1.00 | 0.00 | FALSE |
107 | NTR | Blood | HEATR4 | 0.02 | 0.00 | bslmm | 374 | 0.01 | 4.7e-04 | -5.303 | 6.1 | 1.4e-09 | -0.29 | 0.22 | 0.04 | FALSE |
108 | YFS | Blood | ACOT4 | 0.41 | 0.34 | enet | 30 | 0.37 | 8.2e-131 | 5.402 | 6.2 | 7.5e-10 | -0.23 | 1.00 | 0.00 | FALSE |
109 | YFS | Blood | LIN52 | 0.03 | 0.03 | lasso | 6 | 0.02 | 3.2e-08 | -6.352 | -6.4 | 2.1e-10 | -0.03 | 1.00 | 0.00 | FALSE |
110 | YFS | Blood | NUMB | 0.04 | 0.02 | blup | 461 | 0.03 | 3.9e-09 | -5.651 | 8.5 | 2.5e-17 | -0.26 | 1.00 | 0.00 | FALSE |
111 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ACOT4 | 0.04 | 0.02 | enet | 6 | 0.02 | 4.0e-03 | -8.373 | 7.6 | 4.0e-14 | -0.33 | 0.00 | 0.94 | FALSE |
112 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | LIN52 | 0.20 | 0.18 | blup | 103 | 0.18 | 8.5e-15 | -6.468 | -5.8 | 6.9e-09 | 0.00 | 0.12 | 0.88 | FALSE |
113 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ACOT4 | 0.05 | 0.05 | lasso | 3 | 0.05 | 5.0e-10 | 5.468 | 5.4 | 6.4e-08 | -0.22 | 0.98 | 0.02 | FALSE |
114 | The Cancer Genome Atlas | Breast Invasive Carcinoma | DCAF4 | 0.03 | 0.01 | enet | 5 | 0.02 | 3.0e-04 | 6.269 | 5.8 | 7.9e-09 | -0.21 | 0.08 | 0.04 | FALSE |
115 | The Cancer Genome Atlas | Breast Invasive Carcinoma | LIN52 | 0.10 | 0.14 | enet | 22 | 0.14 | 3.5e-28 | -6.404 | -5.8 | 8.3e-09 | -0.01 | 0.12 | 0.88 | FALSE |
116 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | ACOT4 | 0.08 | 0.04 | blup | 33 | 0.04 | 5.9e-03 | 5.468 | 5.3 | 1.3e-07 | -0.23 | 0.03 | 0.51 | FALSE |
117 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | LIN52 | 0.12 | 0.08 | blup | 101 | 0.12 | 1.0e-06 | -6.485 | -6.8 | 8.1e-12 | -0.03 | 0.07 | 0.93 | FALSE |
118 | The Cancer Genome Atlas | Colon Adenocarcinoma | ACOT1 | 0.07 | 0.02 | blup | 52 | 0.02 | 1.7e-02 | 7.087 | 8.5 | 2.9e-17 | -0.41 | 0.01 | 0.75 | TRUE |
119 | The Cancer Genome Atlas | Colon Adenocarcinoma | LIN52 | 0.16 | 0.06 | enet | 10 | 0.12 | 1.7e-07 | -4.780 | -6.1 | 9.5e-10 | -0.03 | 0.14 | 0.84 | FALSE |
120 | The Cancer Genome Atlas | Esophageal Carcinoma | LIN52 | 0.18 | 0.11 | blup | 103 | 0.11 | 2.0e-04 | -6.444 | -6.2 | 6.3e-10 | -0.05 | 0.14 | 0.55 | FALSE |
121 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ACOT1 | 0.06 | 0.05 | enet | 13 | 0.06 | 8.3e-08 | 5.402 | 6.7 | 2.1e-11 | -0.29 | 0.10 | 0.90 | FALSE |
122 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | DCAF4 | 0.04 | 0.02 | blup | 83 | 0.03 | 1.2e-04 | 3.523 | 7.5 | 6.9e-14 | -0.64 | 0.43 | 0.12 | FALSE |
123 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | LIN52 | 0.11 | 0.16 | lasso | 3 | 0.15 | 8.8e-17 | -6.404 | -6.9 | 5.7e-12 | -0.03 | 0.13 | 0.87 | FALSE |
124 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ACOT4 | 0.03 | 0.02 | blup | 33 | 0.01 | 8.7e-03 | 7.087 | 6.7 | 2.6e-11 | -0.27 | 0.00 | 0.93 | FALSE |
125 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DCAF4 | 0.32 | 0.11 | enet | 25 | 0.12 | 1.1e-13 | 6.269 | 5.5 | 4.3e-08 | -0.20 | 1.00 | 0.00 | FALSE |
126 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LIN52 | 0.17 | 0.17 | lasso | 6 | 0.16 | 1.3e-17 | -6.404 | -6.5 | 9.2e-11 | -0.03 | 0.12 | 0.88 | FALSE |
127 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | LIN52 | 0.11 | 0.13 | lasso | 5 | 0.13 | 1.1e-07 | -6.352 | -6.2 | 7.6e-10 | -0.03 | 0.13 | 0.86 | FALSE |
128 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ACOT1 | 0.04 | 0.01 | blup | 51 | 0.01 | 7.4e-02 | -5.131 | 5.6 | 2.5e-08 | -0.16 | 0.05 | 0.11 | FALSE |
129 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ACOT6 | 0.05 | 0.04 | blup | 35 | 0.04 | 1.5e-05 | 7.193 | -6.6 | 3.7e-11 | 0.27 | 0.05 | 0.90 | FALSE |
130 | The Cancer Genome Atlas | Brain Lower Grade Glioma | DCAF4 | 0.26 | 0.09 | enet | 13 | 0.13 | 2.1e-14 | 6.110 | 7.3 | 3.3e-13 | -0.49 | 1.00 | 0.00 | FALSE |
131 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LIN52 | 0.19 | 0.25 | lasso | 8 | 0.25 | 6.6e-28 | -6.468 | -6.3 | 3.6e-10 | -0.03 | 0.12 | 0.88 | FALSE |
132 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | HEATR4 | 0.18 | 0.04 | lasso | 4 | 0.09 | 6.1e-05 | 6.206 | 5.5 | 3.4e-08 | -0.37 | 0.11 | 0.11 | FALSE |
133 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | LIN52 | 0.23 | 0.20 | enet | 10 | 0.20 | 9.4e-10 | -6.468 | -7.2 | 5.9e-13 | 0.01 | 0.12 | 0.88 | FALSE |
134 | The Cancer Genome Atlas | Lung Adenocarcinoma | LIN52 | 0.15 | 0.17 | enet | 13 | 0.18 | 1.4e-20 | -6.352 | -6.2 | 5.2e-10 | -0.03 | 0.13 | 0.87 | FALSE |
135 | The Cancer Genome Atlas | Lung Adenocarcinoma | PAPLN | 0.03 | 0.03 | blup | 63 | 0.02 | 3.1e-03 | 6.574 | 5.8 | 8.6e-09 | -0.18 | 0.01 | 0.94 | FALSE |
136 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | ACOT4 | 0.04 | 0.03 | enet | 9 | 0.04 | 2.3e-05 | 7.087 | 6.6 | 3.5e-11 | -0.26 | 0.02 | 0.97 | FALSE |
137 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | LIN52 | 0.08 | 0.10 | enet | 13 | 0.09 | 1.0e-10 | -6.444 | -6.1 | 1.0e-09 | -0.04 | 0.12 | 0.88 | FALSE |
138 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | ACOT4 | 0.21 | 0.06 | enet | 18 | 0.04 | 5.5e-04 | 5.402 | 5.2 | 1.6e-07 | -0.19 | 0.02 | 0.89 | FALSE |
139 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | HEATR4 | 0.08 | 0.02 | blup | 55 | 0.03 | 2.4e-03 | -4.092 | -5.6 | 2.1e-08 | 0.12 | 0.04 | 0.11 | FALSE |
140 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | LIN52 | 0.06 | 0.05 | lasso | 4 | 0.04 | 5.7e-04 | -6.468 | -6.1 | 1.3e-09 | -0.01 | 0.14 | 0.59 | FALSE |
141 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ACOT1 | 0.24 | 0.05 | enet | 20 | 0.06 | 1.3e-03 | -0.888 | 6.2 | 4.5e-10 | -0.24 | 0.02 | 0.09 | FALSE |
142 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ACOT4 | 0.11 | 0.04 | lasso | 3 | 0.00 | 2.0e-01 | 5.402 | 5.4 | 5.1e-08 | -0.22 | 0.01 | 0.29 | FALSE |
143 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | LIN52 | 0.13 | 0.12 | blup | 103 | 0.09 | 2.5e-04 | -6.404 | -5.8 | 6.7e-09 | -0.04 | 0.11 | 0.86 | FALSE |
144 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ACOT1 | 0.12 | 0.02 | enet | 14 | 0.06 | 2.8e-07 | 7.193 | 7.0 | 1.9e-12 | -0.22 | 0.06 | 0.65 | FALSE |
145 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ACOT4 | 0.20 | 0.17 | lasso | 5 | 0.16 | 1.2e-16 | 5.468 | 5.8 | 5.8e-09 | -0.23 | 1.00 | 0.00 | FALSE |
146 | The Cancer Genome Atlas | Prostate Adenocarcinoma | LIN52 | 0.18 | 0.20 | lasso | 4 | 0.20 | 3.8e-20 | -6.404 | -6.4 | 1.1e-10 | -0.03 | 0.12 | 0.88 | FALSE |
147 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | ACOT1 | 0.31 | 0.10 | blup | 51 | 0.13 | 2.0e-04 | -5.208 | 5.4 | 7.8e-08 | -0.16 | 0.10 | 0.18 | FALSE |
148 | The Cancer Genome Atlas | Stomach Adenocarcinoma | LIN52 | 0.10 | 0.08 | lasso | 2 | 0.10 | 1.7e-07 | -6.404 | -6.0 | 1.6e-09 | -0.01 | 0.14 | 0.86 | FALSE |
149 | The Cancer Genome Atlas | Thyroid Carcinoma | ACOT1 | 0.05 | 0.02 | blup | 50 | 0.03 | 8.2e-04 | -5.208 | 8.2 | 2.3e-16 | -0.33 | 0.02 | 0.80 | TRUE |
150 | The Cancer Genome Atlas | Thyroid Carcinoma | ACOT4 | 0.12 | 0.14 | blup | 32 | 0.14 | 3.9e-13 | 5.402 | 5.8 | 5.0e-09 | -0.24 | 0.72 | 0.28 | FALSE |
151 | The Cancer Genome Atlas | Thyroid Carcinoma | DPF3 | 0.10 | 0.02 | blup | 210 | 0.07 | 1.9e-07 | -7.035 | -7.6 | 2.1e-14 | 0.62 | 0.11 | 0.88 | FALSE |
152 | The Cancer Genome Atlas | Thyroid Carcinoma | LIN52 | 0.25 | 0.27 | lasso | 2 | 0.27 | 1.2e-26 | -6.444 | -6.6 | 4.2e-11 | -0.03 | 0.11 | 0.89 | FALSE |