Best TWAS P=3.32e-38 · Best GWAS P=1.66e-63 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ALDH2 | 0.05 | 0.11 | blup | 223 | 0.10 | 1.8e-12 | -7.74 | 8.3 | 1.1e-16 | 0.42 | 1.00 | 0.00 | TRUE |
2 | CommonMind | Brain Pre-frontal Cortex | ATXN2 | 0.02 | 0.03 | enet | 8 | 0.02 | 4.8e-04 | -7.25 | 10.0 | 1.7e-23 | 0.56 | 0.28 | 0.62 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | NAA25 | 0.03 | 0.02 | blup | 213 | 0.03 | 1.1e-04 | -5.25 | -6.2 | 5.4e-10 | -0.33 | 0.74 | 0.02 | FALSE |
4 | GTEx | Adipose Subcutaneous | HECTD4 | 0.06 | 0.00 | enet | 15 | 0.02 | 1.0e-02 | -7.65 | 11.7 | 1.6e-31 | 0.65 | 0.06 | 0.84 | TRUE |
5 | GTEx | Adipose Subcutaneous | TMEM116 | 0.16 | 0.09 | lasso | 2 | 0.10 | 1.5e-08 | -5.25 | -5.2 | 2.4e-07 | -0.27 | 1.00 | 0.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | MAPKAPK5-AS1 | 0.08 | 0.01 | enet | 26 | 0.03 | 2.1e-03 | -8.58 | -8.5 | 1.5e-17 | -0.44 | 0.98 | 0.01 | FALSE |
7 | GTEx | Adipose Subcutaneous | AC003029.1 | 0.08 | 0.07 | enet | 30 | 0.05 | 1.2e-04 | -7.66 | -9.0 | 1.7e-19 | -0.47 | 1.00 | 0.00 | FALSE |
8 | GTEx | Adipose Visceral Omentum | TMEM116 | 0.21 | 0.14 | lasso | 11 | 0.14 | 1.1e-07 | -5.27 | -5.6 | 1.9e-08 | -0.29 | 1.00 | 0.00 | FALSE |
9 | GTEx | Adipose Visceral Omentum | RP3-462E2.5 | 0.15 | 0.07 | enet | 8 | 0.07 | 1.0e-04 | -5.05 | 5.5 | 3.0e-08 | 0.28 | 0.62 | 0.12 | FALSE |
10 | GTEx | Adrenal Gland | TMEM116 | 0.09 | 0.05 | lasso | 12 | 0.03 | 4.2e-02 | -5.35 | -5.3 | 1.3e-07 | -0.27 | 0.28 | 0.04 | FALSE |
11 | GTEx | Adrenal Gland | MAPKAPK5-AS1 | 0.10 | 0.08 | lasso | 12 | 0.03 | 3.0e-02 | -7.63 | -7.6 | 2.1e-14 | -0.39 | 0.56 | 0.06 | FALSE |
12 | GTEx | Adrenal Gland | AC003029.1 | 0.12 | 0.10 | lasso | 13 | 0.07 | 2.0e-03 | -7.63 | -7.7 | 1.1e-14 | -0.39 | 0.80 | 0.04 | FALSE |
13 | GTEx | Artery Aorta | ALDH2 | 0.05 | 0.04 | enet | 33 | 0.05 | 1.3e-03 | -5.61 | 7.3 | 2.0e-13 | 0.38 | 0.59 | 0.10 | FALSE |
14 | GTEx | Artery Aorta | TMEM116 | 0.27 | 0.21 | lasso | 16 | 0.20 | 1.9e-11 | -4.70 | -5.2 | 2.4e-07 | -0.26 | 1.00 | 0.00 | FALSE |
15 | GTEx | Artery Aorta | AC003029.1 | 0.07 | 0.01 | lasso | 7 | 0.01 | 5.4e-02 | -8.50 | -8.2 | 1.7e-16 | -0.43 | 0.20 | 0.26 | FALSE |
16 | GTEx | Artery Coronary | TMEM116 | 0.20 | 0.09 | lasso | 4 | 0.11 | 1.4e-04 | -5.35 | -5.3 | 1.1e-07 | -0.27 | 0.80 | 0.01 | FALSE |
17 | GTEx | Artery Coronary | MAPKAPK5-AS1 | 0.16 | 0.10 | lasso | 13 | 0.06 | 5.7e-03 | -7.60 | -7.6 | 3.0e-14 | -0.38 | 0.39 | 0.07 | FALSE |
18 | GTEx | Artery Coronary | AC003029.1 | 0.14 | 0.12 | enet | 39 | 0.07 | 1.8e-03 | -7.60 | -7.2 | 4.9e-13 | -0.34 | 0.61 | 0.04 | FALSE |
19 | GTEx | Artery Tibial | ALDH2 | 0.08 | 0.09 | lasso | 2 | 0.07 | 2.7e-06 | -7.65 | 8.1 | 5.1e-16 | 0.41 | 0.95 | 0.02 | FALSE |
20 | GTEx | Artery Tibial | HECTD4 | 0.05 | 0.02 | lasso | 3 | 0.01 | 3.1e-02 | 13.38 | 12.9 | 3.3e-38 | 0.78 | 0.02 | 0.92 | TRUE |
21 | GTEx | Artery Tibial | TMEM116 | 0.19 | 0.25 | lasso | 8 | 0.21 | 1.1e-16 | -5.25 | -5.6 | 2.2e-08 | -0.29 | 1.00 | 0.00 | FALSE |
22 | GTEx | Artery Tibial | MAPKAPK5-AS1 | 0.07 | 0.05 | lasso | 11 | 0.05 | 9.7e-05 | -5.28 | -6.5 | 9.0e-11 | -0.33 | 0.76 | 0.02 | FALSE |
23 | GTEx | Artery Tibial | AC003029.1 | 0.05 | 0.04 | lasso | 12 | 0.03 | 3.6e-03 | -7.60 | -7.5 | 7.3e-14 | -0.38 | 0.58 | 0.04 | FALSE |
24 | GTEx | Brain Cerebellar Hemisphere | NAA25 | 0.11 | 0.02 | enet | 10 | 0.00 | 2.5e-01 | -4.66 | -6.0 | 2.2e-09 | -0.33 | 0.14 | 0.06 | FALSE |
25 | GTEx | Brain Cerebellar Hemisphere | ADAM1A | 0.21 | 0.01 | enet | 29 | 0.03 | 6.8e-02 | -5.05 | 7.2 | 4.8e-13 | 0.39 | 0.04 | 0.16 | TRUE |
26 | GTEx | Brain Cerebellum | NAA25 | 0.12 | -0.01 | lasso | 12 | 0.00 | 3.0e-01 | -4.67 | -6.4 | 1.4e-10 | -0.34 | 0.12 | 0.07 | FALSE |
27 | GTEx | Brain Cerebellum | HECTD4 | 0.25 | -0.01 | enet | 24 | 0.06 | 7.7e-03 | -2.44 | 7.3 | 3.9e-13 | 0.42 | 0.06 | 0.72 | FALSE |
28 | GTEx | Brain Cerebellum | ADAM1A | 0.13 | 0.13 | lasso | 1 | 0.12 | 2.4e-04 | -5.28 | 5.3 | 1.3e-07 | 0.27 | 0.30 | 0.09 | FALSE |
29 | GTEx | Brain Frontal Cortex BA9 | ALDH2 | 0.33 | 0.04 | enet | 24 | 0.09 | 2.0e-03 | -6.43 | 6.8 | 1.0e-11 | 0.33 | 0.09 | 0.08 | FALSE |
30 | GTEx | Brain Frontal Cortex BA9 | TMEM116 | 0.10 | 0.09 | lasso | 7 | 0.18 | 1.9e-05 | -7.73 | -7.0 | 2.4e-12 | -0.36 | 0.38 | 0.04 | FALSE |
31 | GTEx | Brain Frontal Cortex BA9 | RP3-462E2.5 | 0.08 | 0.03 | enet | 27 | 0.02 | 1.0e-01 | -7.60 | 5.3 | 9.2e-08 | 0.25 | 0.15 | 0.05 | FALSE |
32 | GTEx | Brain Hippocampus | RP3-462E2.5 | 0.15 | 0.11 | lasso | 12 | 0.10 | 2.0e-03 | -5.29 | 5.3 | 9.6e-08 | 0.28 | 0.36 | 0.04 | FALSE |
33 | GTEx | Brain Putamen basal ganglia | ALDH2 | 0.12 | 0.00 | lasso | 14 | 0.02 | 1.3e-01 | -6.16 | 7.7 | 1.4e-14 | 0.39 | 0.17 | 0.13 | FALSE |
34 | GTEx | Breast Mammary Tissue | VPS29 | 0.20 | 0.03 | enet | 33 | 0.08 | 5.2e-05 | 8.14 | -5.5 | 3.9e-08 | -0.25 | 0.04 | 0.80 | FALSE |
35 | GTEx | Breast Mammary Tissue | HECTD4 | 0.06 | 0.08 | lasso | 1 | 0.07 | 1.6e-04 | -7.60 | 7.6 | 3.0e-14 | 0.38 | 0.32 | 0.19 | FALSE |
36 | GTEx | Breast Mammary Tissue (Male) | RP3-462E2.3 | 0.12 | 0.03 | lasso | 7 | 0.04 | 4.0e-02 | -2.63 | -6.0 | 2.7e-09 | -0.39 | 0.02 | 0.06 | TRUE |
37 | GTEx | Breast Mammary Tissue (Female) | VPS29 | 0.10 | -0.01 | lasso | 2 | 0.02 | 1.0e-01 | 8.14 | -6.6 | 3.7e-11 | -0.34 | 0.03 | 0.26 | TRUE |
38 | GTEx | Breast Mammary Tissue (Female) | RP3-462E2.3 | 0.13 | 0.00 | lasso | 5 | -0.01 | 7.8e-01 | -5.05 | -5.1 | 3.1e-07 | -0.24 | 0.04 | 0.05 | FALSE |
39 | GTEx | Cells Transformed fibroblasts | HECTD4 | 0.04 | 0.01 | lasso | 5 | 0.00 | 4.5e-01 | -4.70 | 6.8 | 1.3e-11 | 0.35 | 0.22 | 0.04 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | MAPKAPK5-AS1 | 0.06 | 0.04 | lasso | 12 | 0.02 | 9.5e-03 | -7.60 | -7.6 | 3.4e-14 | -0.38 | 0.53 | 0.03 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | AC003029.1 | 0.06 | 0.05 | lasso | 1 | 0.03 | 2.1e-03 | -7.60 | -7.6 | 3.0e-14 | -0.38 | 0.66 | 0.02 | FALSE |
42 | GTEx | Colon Sigmoid | MAPKAPK5-AS1 | 0.17 | 0.05 | lasso | 15 | 0.07 | 1.5e-03 | -7.60 | -7.2 | 4.4e-13 | -0.37 | 0.51 | 0.06 | FALSE |
43 | GTEx | Colon Sigmoid | AC003029.1 | 0.17 | 0.08 | lasso | 14 | 0.09 | 3.8e-04 | -7.60 | -6.8 | 8.8e-12 | -0.35 | 0.60 | 0.07 | FALSE |
44 | GTEx | Colon Transverse | VPS29 | 0.13 | 0.01 | enet | 41 | 0.10 | 2.0e-05 | -0.79 | -5.5 | 4.2e-08 | -0.12 | 0.08 | 0.20 | FALSE |
45 | GTEx | Colon Transverse | TMEM116 | 0.09 | 0.05 | lasso | 13 | 0.02 | 2.5e-02 | -5.25 | -5.2 | 1.7e-07 | -0.27 | 0.20 | 0.04 | FALSE |
46 | GTEx | Colon Transverse | FAM109A | 0.21 | 0.00 | lasso | 4 | 0.01 | 1.3e-01 | -7.69 | 6.8 | 7.7e-12 | 0.41 | 0.06 | 0.06 | FALSE |
47 | GTEx | Colon Transverse | MAPKAPK5-AS1 | 0.16 | 0.09 | lasso | 13 | 0.06 | 7.1e-04 | -7.60 | -7.4 | 1.2e-13 | -0.39 | 0.82 | 0.02 | FALSE |
48 | GTEx | Colon Transverse | AC003029.1 | 0.15 | 0.09 | lasso | 12 | 0.07 | 2.1e-04 | -7.60 | -7.5 | 7.0e-14 | -0.39 | 0.81 | 0.02 | FALSE |
49 | GTEx | Esophagus Gastroesophageal Junction | TMEM116 | 0.37 | 0.36 | lasso | 7 | 0.33 | 8.0e-13 | -5.29 | -5.8 | 7.3e-09 | -0.30 | 1.00 | 0.00 | FALSE |
50 | GTEx | Esophagus Gastroesophageal Junction | AC003029.1 | 0.06 | 0.03 | lasso | 3 | 0.04 | 1.9e-02 | -6.80 | -7.2 | 7.6e-13 | -0.38 | 0.15 | 0.09 | FALSE |
51 | GTEx | Esophagus Gastroesophageal Junction | RP3-462E2.5 | 0.12 | 0.09 | lasso | 5 | 0.09 | 3.5e-04 | -5.29 | 5.5 | 5.2e-08 | 0.28 | 0.20 | 0.05 | FALSE |
52 | GTEx | Esophagus Mucosa | ALDH2 | 0.05 | 0.06 | lasso | 6 | 0.07 | 1.7e-05 | -7.63 | 8.3 | 8.6e-17 | 0.43 | 0.92 | 0.04 | FALSE |
53 | GTEx | Esophagus Mucosa | TMEM116 | 0.09 | 0.02 | lasso | 2 | 0.03 | 7.3e-03 | -5.27 | -5.2 | 2.0e-07 | -0.27 | 0.61 | 0.02 | FALSE |
54 | GTEx | Esophagus Muscularis | HECTD4 | 0.06 | 0.03 | lasso | 4 | 0.02 | 1.8e-02 | -7.63 | 8.0 | 9.8e-16 | 0.41 | 0.57 | 0.07 | FALSE |
55 | GTEx | Esophagus Muscularis | MAPKAPK5-AS1 | 0.04 | 0.02 | enet | 7 | 0.02 | 2.7e-02 | -7.67 | -7.8 | 8.6e-15 | -0.39 | 0.35 | 0.03 | FALSE |
56 | GTEx | Esophagus Muscularis | AC003029.1 | 0.07 | 0.01 | enet | 14 | 0.02 | 1.4e-02 | -7.67 | -5.5 | 2.9e-08 | -0.23 | 0.73 | 0.01 | FALSE |
57 | GTEx | Esophagus Muscularis | RP3-462E2.5 | 0.06 | 0.04 | lasso | 14 | 0.03 | 4.6e-03 | -5.25 | 6.2 | 5.5e-10 | 0.32 | 0.75 | 0.02 | FALSE |
58 | GTEx | Heart Atrial Appendage | ALDH2 | 0.16 | 0.14 | lasso | 3 | 0.10 | 2.4e-05 | -5.22 | 5.9 | 4.7e-09 | 0.28 | 0.52 | 0.04 | FALSE |
59 | GTEx | Heart Atrial Appendage | TMEM116 | 0.47 | 0.49 | lasso | 11 | 0.49 | 1.3e-24 | -5.25 | -5.2 | 1.7e-07 | -0.27 | 1.00 | 0.00 | FALSE |
60 | GTEx | Heart Left Ventricle | TMEM116 | 0.06 | 0.05 | lasso | 4 | 0.03 | 8.1e-03 | -5.38 | -5.4 | 8.2e-08 | -0.28 | 0.30 | 0.29 | FALSE |
61 | GTEx | Heart Left Ventricle | ADAM1A | 0.20 | 0.07 | enet | 22 | 0.10 | 4.3e-06 | -4.70 | -5.5 | 4.3e-08 | -0.34 | 0.35 | 0.14 | TRUE |
62 | GTEx | Lung | ALDH2 | 0.07 | 0.01 | lasso | 10 | 0.02 | 5.9e-03 | -7.73 | 7.8 | 5.4e-15 | 0.39 | 0.38 | 0.04 | FALSE |
63 | GTEx | Lung | TMEM116 | 0.11 | 0.04 | lasso | 13 | 0.03 | 2.7e-03 | -5.25 | -5.3 | 1.4e-07 | -0.27 | 0.24 | 0.04 | FALSE |
64 | GTEx | Lung | RP3-462E2.3 | 0.11 | 0.10 | lasso | 6 | 0.09 | 2.2e-07 | -5.61 | -6.0 | 1.7e-09 | -0.29 | 1.00 | 0.00 | FALSE |
65 | GTEx | Lung | RP3-462E2.5 | 0.07 | 0.03 | enet | 13 | 0.03 | 3.1e-03 | -4.67 | 5.2 | 2.0e-07 | 0.26 | 0.72 | 0.02 | FALSE |
66 | GTEx | Muscle Skeletal | MAPKAPK5 | 0.08 | 0.04 | lasso | 7 | 0.02 | 3.6e-03 | -5.05 | 5.8 | 7.2e-09 | 0.28 | 0.79 | 0.01 | FALSE |
67 | GTEx | Muscle Skeletal | TMEM116 | 0.11 | 0.09 | lasso | 2 | 0.07 | 2.5e-07 | -5.30 | -5.3 | 1.3e-07 | -0.27 | 1.00 | 0.00 | FALSE |
68 | GTEx | Nerve Tibial | ALDH2 | 0.05 | 0.04 | lasso | 3 | 0.05 | 2.4e-04 | -7.63 | 7.8 | 9.5e-15 | 0.39 | 0.76 | 0.02 | FALSE |
69 | GTEx | Nerve Tibial | HECTD4 | 0.05 | 0.01 | enet | 6 | 0.01 | 3.6e-02 | -7.93 | 7.9 | 3.2e-15 | 0.41 | 0.22 | 0.46 | FALSE |
70 | GTEx | Nerve Tibial | MAPKAPK5-AS1 | 0.05 | 0.00 | lasso | 19 | 0.00 | 1.4e-01 | -5.25 | -5.7 | 1.2e-08 | -0.30 | 0.18 | 0.05 | FALSE |
71 | GTEx | Nerve Tibial | AC003029.1 | 0.04 | 0.00 | lasso | 23 | 0.00 | 4.2e-01 | -5.27 | -7.5 | 5.4e-14 | -0.38 | 0.18 | 0.05 | FALSE |
72 | GTEx | Nerve Tibial | RP3-462E2.3 | 0.12 | 0.03 | lasso | 7 | 0.03 | 2.7e-03 | -5.05 | -6.2 | 5.2e-10 | -0.32 | 0.93 | 0.00 | FALSE |
73 | GTEx | Pituitary | ADAM1A | 0.18 | 0.22 | enet | 42 | 0.20 | 9.6e-06 | -4.60 | 6.7 | 1.6e-11 | 0.35 | 0.80 | 0.03 | FALSE |
74 | GTEx | Pituitary | RP3-462E2.5 | 0.15 | 0.12 | lasso | 3 | 0.14 | 2.3e-04 | -7.65 | 8.5 | 2.0e-17 | 0.43 | 0.23 | 0.05 | FALSE |
75 | GTEx | Prostate | ADAM1A | 0.30 | 0.11 | lasso | 16 | 0.12 | 5.4e-04 | -5.37 | 6.2 | 4.1e-10 | 0.34 | 0.49 | 0.22 | FALSE |
76 | GTEx | Skin Not Sun Exposed Suprapubic | ALDH2 | 0.13 | 0.18 | lasso | 9 | 0.16 | 5.0e-09 | -7.60 | 8.0 | 1.3e-15 | 0.40 | 1.00 | 0.00 | FALSE |
77 | GTEx | Skin Not Sun Exposed Suprapubic | MAPKAPK5-AS1 | 0.04 | 0.00 | enet | 30 | 0.00 | 7.0e-01 | -7.60 | -9.8 | 1.5e-22 | -0.53 | 0.21 | 0.17 | FALSE |
78 | GTEx | Skin Not Sun Exposed Suprapubic | RP3-462E2.5 | 0.10 | 0.10 | enet | 17 | 0.11 | 1.2e-06 | -5.25 | 5.8 | 6.2e-09 | 0.29 | 0.99 | 0.00 | FALSE |
79 | GTEx | Skin Sun Exposed Lower leg | ALDH2 | 0.10 | 0.09 | enet | 13 | 0.13 | 6.7e-11 | -7.74 | 11.3 | 9.0e-30 | 0.62 | 0.98 | 0.02 | FALSE |
80 | GTEx | Skin Sun Exposed Lower leg | MAPKAPK5-AS1 | 0.09 | 0.10 | lasso | 4 | 0.10 | 1.1e-08 | -7.66 | -7.7 | 1.2e-14 | -0.39 | 1.00 | 0.00 | FALSE |
81 | GTEx | Skin Sun Exposed Lower leg | AC003029.1 | 0.09 | 0.10 | lasso | 2 | 0.10 | 8.8e-09 | -7.75 | -7.8 | 5.9e-15 | -0.39 | 1.00 | 0.00 | FALSE |
82 | GTEx | Skin Sun Exposed Lower leg | RP3-462E2.3 | 0.06 | 0.05 | lasso | 6 | 0.05 | 1.0e-04 | -5.61 | -5.6 | 2.2e-08 | -0.27 | 0.41 | 0.02 | FALSE |
83 | GTEx | Spleen | TMEM116 | 0.37 | 0.06 | lasso | 7 | 0.05 | 1.7e-02 | -5.35 | -5.4 | 7.6e-08 | -0.27 | 0.18 | 0.05 | FALSE |
84 | GTEx | Stomach | TMEM116 | 0.13 | 0.03 | lasso | 7 | 0.03 | 1.6e-02 | -4.67 | -8.6 | 1.1e-17 | -0.46 | 0.07 | 0.15 | FALSE |
85 | GTEx | Stomach | AC003029.1 | 0.10 | 0.03 | enet | 32 | 0.02 | 2.6e-02 | -7.60 | -6.9 | 4.3e-12 | -0.34 | 0.47 | 0.08 | FALSE |
86 | GTEx | Testis | MAPKAPK5 | 0.23 | 0.12 | lasso | 5 | 0.15 | 3.1e-07 | -5.61 | 7.8 | 5.3e-15 | 0.41 | 0.72 | 0.22 | FALSE |
87 | GTEx | Testis | BRAP | 0.06 | 0.03 | enet | 13 | 0.01 | 8.7e-02 | -7.63 | -8.1 | 8.4e-16 | -0.41 | 0.43 | 0.08 | FALSE |
88 | GTEx | Testis | MAPKAPK5-AS1 | 0.07 | 0.04 | lasso | 1 | 0.03 | 1.3e-02 | -7.60 | -7.6 | 2.9e-14 | -0.38 | 0.19 | 0.13 | FALSE |
89 | GTEx | Testis | AC003029.1 | 0.10 | 0.10 | lasso | 14 | 0.09 | 5.8e-05 | -7.60 | -7.5 | 7.2e-14 | -0.38 | 0.64 | 0.12 | FALSE |
90 | GTEx | Thyroid | BRAP | 0.07 | 0.02 | lasso | 7 | 0.03 | 1.1e-03 | -8.55 | -10.1 | 5.7e-24 | -0.54 | 0.39 | 0.38 | FALSE |
91 | GTEx | Thyroid | ALDH2 | 0.06 | 0.04 | lasso | 4 | 0.05 | 9.7e-05 | -8.50 | 8.8 | 2.2e-18 | 0.47 | 0.87 | 0.07 | FALSE |
92 | GTEx | Thyroid | MAPKAPK5-AS1 | 0.04 | 0.04 | lasso | 2 | 0.03 | 1.5e-03 | -7.60 | -7.6 | 2.5e-14 | -0.38 | 0.62 | 0.02 | FALSE |
93 | GTEx | Thyroid | AC003029.1 | 0.04 | 0.05 | lasso | 3 | 0.04 | 8.3e-04 | -7.60 | -7.8 | 9.5e-15 | -0.39 | 0.81 | 0.04 | FALSE |
94 | GTEx | Whole Blood | ADAM1A | 0.08 | 0.02 | lasso | 10 | 0.01 | 2.7e-02 | -5.25 | 5.9 | 2.9e-09 | 0.31 | 0.34 | 0.34 | FALSE |
95 | METSIM | Adipose | ALDH2 | 0.07 | 0.00 | bslmm | 220 | 0.02 | 2.5e-04 | -5.61 | 6.8 | 9.1e-12 | 0.32 | 0.16 | 0.04 | FALSE |
96 | NTR | Blood | ALDH2 | 0.06 | 0.01 | blup | 222 | 0.02 | 4.3e-08 | -2.51 | -6.9 | 6.6e-12 | -0.43 | 0.99 | 0.00 | FALSE |
97 | NTR | Blood | TMEM116 | 0.01 | 0.00 | blup | 199 | 0.00 | 9.3e-03 | -7.64 | -5.7 | 1.0e-08 | -0.27 | 0.64 | 0.01 | FALSE |
98 | YFS | Blood | ACAD10 | 0.07 | 0.01 | bslmm | 241 | 0.02 | 4.3e-08 | -7.93 | -8.0 | 8.9e-16 | -0.41 | 0.09 | 0.40 | FALSE |
99 | YFS | Blood | ATXN2 | 0.05 | 0.02 | blup | 257 | 0.04 | 2.8e-12 | -5.05 | -5.2 | 2.2e-07 | -0.28 | 1.00 | 0.00 | FALSE |
100 | YFS | Blood | SH2B3 | 0.05 | 0.01 | enet | 22 | 0.02 | 3.3e-07 | -8.55 | 12.5 | 4.7e-36 | 0.64 | 0.76 | 0.24 | FALSE |
101 | YFS | Blood | TCTN1 | 0.05 | 0.00 | bslmm | 204 | 0.02 | 3.1e-06 | 0.60 | -5.3 | 1.1e-07 | -0.21 | 0.25 | 0.64 | FALSE |
102 | YFS | Blood | TRAFD1 | 0.04 | 0.02 | lasso | 2 | 0.01 | 2.9e-05 | 6.85 | 8.7 | 4.4e-18 | 0.55 | 0.09 | 0.85 | FALSE |
103 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C12orf47 | 0.01 | 0.01 | blup | 31 | 0.01 | 7.3e-03 | -7.60 | -7.4 | 1.9e-13 | -0.38 | 0.08 | 0.04 | FALSE |
104 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MAPKAPK5 | 0.04 | 0.02 | lasso | 4 | 0.02 | 5.4e-05 | -5.61 | 5.9 | 4.0e-09 | 0.28 | 0.54 | 0.26 | FALSE |
105 | The Cancer Genome Atlas | Colon Adenocarcinoma | ALDH2 | 0.07 | 0.03 | lasso | 4 | 0.06 | 3.9e-04 | -5.05 | 8.5 | 2.7e-17 | 0.44 | 0.01 | 0.91 | TRUE |
106 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C12orf47 | 0.03 | 0.03 | lasso | 3 | 0.03 | 6.3e-04 | -5.05 | -6.0 | 1.9e-09 | -0.29 | 0.16 | 0.10 | FALSE |
107 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C12orf47 | 0.07 | 0.04 | lasso | 2 | 0.03 | 1.0e-04 | -7.64 | -7.3 | 2.7e-13 | -0.36 | 0.18 | 0.77 | FALSE |
108 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MAPKAPK5 | 0.06 | 0.03 | lasso | 3 | 0.03 | 6.5e-04 | -5.61 | 5.5 | 2.9e-08 | 0.26 | 0.24 | 0.08 | FALSE |
109 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ALDH2 | 0.10 | 0.08 | blup | 30 | 0.09 | 4.5e-06 | -7.74 | 6.9 | 6.3e-12 | 0.36 | 0.72 | 0.09 | FALSE |
110 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | TMEM116 | 0.04 | 0.04 | enet | 13 | 0.04 | 2.7e-03 | -4.67 | -6.0 | 1.5e-09 | -0.31 | 0.05 | 0.12 | FALSE |
111 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ACAD10 | 0.02 | 0.02 | lasso | 3 | 0.01 | 7.0e-03 | -9.20 | -9.2 | 2.2e-20 | -0.50 | 0.00 | 0.92 | FALSE |
112 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ALDH2 | 0.03 | 0.03 | lasso | 1 | 0.03 | 3.1e-04 | -7.74 | 7.7 | 1.0e-14 | 0.38 | 0.04 | 0.51 | FALSE |
113 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MAPKAPK5 | 0.03 | 0.01 | blup | 42 | 0.01 | 2.5e-02 | -5.61 | 7.5 | 4.3e-14 | 0.37 | 0.05 | 0.48 | FALSE |
114 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TMEM116 | 0.03 | 0.03 | blup | 43 | 0.03 | 8.0e-05 | -5.32 | -8.0 | 1.6e-15 | -0.43 | 0.52 | 0.21 | FALSE |
115 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | TMEM116 | 0.04 | 0.02 | blup | 43 | 0.02 | 3.5e-02 | -5.25 | -7.5 | 9.1e-14 | -0.39 | 0.03 | 0.12 | FALSE |
116 | The Cancer Genome Atlas | Lung Adenocarcinoma | C12orf47 | 0.02 | 0.01 | blup | 31 | 0.02 | 1.7e-03 | -7.60 | -7.1 | 1.6e-12 | -0.36 | 0.14 | 0.08 | FALSE |
117 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | TMEM116 | 0.12 | 0.07 | blup | 43 | 0.10 | 7.6e-05 | -5.27 | -6.8 | 1.2e-11 | -0.37 | 0.36 | 0.21 | FALSE |
118 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | ALDH2 | 0.08 | 0.08 | blup | 32 | 0.09 | 2.3e-04 | -7.60 | 7.6 | 2.9e-14 | 0.37 | 0.18 | 0.40 | FALSE |
119 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | ERP29 | 0.11 | 0.03 | blup | 25 | 0.05 | 5.0e-03 | -7.64 | -10.8 | 5.3e-27 | -0.60 | 0.01 | 0.75 | FALSE |
120 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | TMEM116 | 0.17 | 0.06 | blup | 43 | 0.05 | 5.6e-03 | -5.25 | -5.9 | 4.0e-09 | -0.34 | 0.09 | 0.20 | FALSE |
121 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ALDH2 | 0.02 | 0.02 | blup | 31 | 0.01 | 1.2e-02 | -7.67 | 7.1 | 1.2e-12 | 0.35 | 0.06 | 0.05 | FALSE |
122 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C12orf47 | 0.04 | 0.03 | blup | 31 | 0.02 | 2.8e-03 | -7.67 | -6.0 | 1.6e-09 | -0.30 | 0.13 | 0.06 | FALSE |
123 | The Cancer Genome Atlas | Thyroid Carcinoma | ALDH2 | 0.03 | 0.02 | blup | 31 | 0.02 | 6.4e-03 | -7.70 | 6.8 | 7.3e-12 | 0.32 | 0.08 | 0.12 | FALSE |