Best TWAS P=3.53e-41 · Best GWAS P=1.01e-38 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CBY1 | 0.04 | 0.02 | blup | 377 | 0.03 | 1.5e-04 | -12.58 | 11.7 | 1.1e-31 | -0.87 | 0.07 | 0.92 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | DDX17 | 0.04 | 0.02 | lasso | 6 | 0.03 | 1.2e-04 | -11.18 | -13.4 | 6.8e-41 | 0.91 | 0.04 | 0.95 | TRUE |
3 | CommonMind | Brain Pre-frontal Cortex | FOXRED2 | 0.23 | 0.12 | lasso | 4 | 0.21 | 5.9e-25 | 7.87 | 5.4 | 5.4e-08 | 0.03 | 0.00 | 1.00 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | JOSD1 | 0.06 | 0.06 | lasso | 2 | 0.07 | 1.3e-08 | -12.82 | 13.0 | 9.9e-39 | -0.94 | 0.04 | 0.96 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | MICALL1 | 0.10 | 0.04 | blup | 388 | 0.05 | 6.2e-07 | 6.15 | -7.1 | 1.5e-12 | -0.03 | 0.77 | 0.23 | FALSE |
6 | CommonMind | Brain Pre-frontal Cortex | POLR2F | 0.06 | 0.05 | blup | 389 | 0.05 | 5.5e-07 | 6.05 | -7.2 | 6.4e-13 | 0.01 | 0.99 | 0.00 | FALSE |
7 | CommonMind | Brain Pre-frontal Cortex | TOMM22 | 0.15 | 0.26 | lasso | 7 | 0.27 | 4.0e-33 | -12.38 | 12.7 | 9.8e-37 | -0.93 | 0.78 | 0.22 | FALSE |
8 | CommonMind | Brain Pre-frontal Cortex | TRIOBP | 0.20 | 0.20 | bslmm | 501 | 0.21 | 4.3e-25 | 6.85 | -6.8 | 1.1e-11 | -0.03 | 1.00 | 0.00 | FALSE |
9 | GTEx | Adipose Subcutaneous | TRIOBP | 0.13 | 0.14 | lasso | 7 | 0.14 | 3.9e-11 | 6.97 | -7.3 | 3.8e-13 | -0.01 | 0.96 | 0.04 | FALSE |
10 | GTEx | Adipose Subcutaneous | GCAT | 0.16 | 0.12 | lasso | 5 | 0.12 | 9.2e-10 | 7.02 | 7.1 | 9.7e-13 | -0.01 | 0.98 | 0.02 | FALSE |
11 | GTEx | Adipose Subcutaneous | CBY1 | 0.21 | 0.22 | lasso | 5 | 0.23 | 1.5e-18 | -12.46 | 12.7 | 5.8e-37 | -0.95 | 0.04 | 0.96 | FALSE |
12 | GTEx | Adipose Subcutaneous | TOMM22 | 0.11 | 0.02 | lasso | 5 | 0.01 | 6.5e-02 | -12.38 | 12.9 | 3.3e-38 | -0.91 | 0.08 | 0.36 | FALSE |
13 | GTEx | Adipose Subcutaneous | RP3-508I15.9 | 0.16 | 0.23 | lasso | 3 | 0.22 | 3.5e-18 | -12.43 | 12.5 | 4.7e-36 | -0.93 | 0.10 | 0.90 | FALSE |
14 | GTEx | Adipose Visceral Omentum | TRIOBP | 0.16 | 0.14 | enet | 28 | 0.12 | 5.6e-07 | 6.72 | -6.5 | 9.2e-11 | 0.01 | 0.91 | 0.07 | FALSE |
15 | GTEx | Adipose Visceral Omentum | GCAT | 0.14 | 0.02 | lasso | 6 | 0.03 | 7.2e-03 | -2.51 | 5.2 | 2.1e-07 | 0.04 | 0.08 | 0.30 | FALSE |
16 | GTEx | Adipose Visceral Omentum | CBY1 | 0.15 | 0.22 | lasso | 4 | 0.21 | 3.4e-11 | -12.46 | 12.6 | 3.3e-36 | -0.93 | 0.08 | 0.92 | FALSE |
17 | GTEx | Adipose Visceral Omentum | RP3-508I15.9 | 0.15 | 0.14 | lasso | 4 | 0.14 | 1.5e-07 | -12.46 | 12.7 | 4.8e-37 | -0.95 | 0.05 | 0.95 | FALSE |
18 | GTEx | Artery Aorta | TRIOBP | 0.13 | 0.10 | lasso | 8 | 0.11 | 1.1e-06 | 6.72 | -7.2 | 5.7e-13 | -0.02 | 0.90 | 0.09 | FALSE |
19 | GTEx | Artery Aorta | GCAT | 0.16 | 0.15 | lasso | 2 | 0.14 | 5.4e-08 | 6.97 | 7.0 | 3.3e-12 | 0.00 | 0.16 | 0.84 | FALSE |
20 | GTEx | Artery Aorta | MICALL1 | 0.11 | 0.06 | lasso | 2 | 0.02 | 1.5e-02 | 6.57 | 6.7 | 2.3e-11 | 0.06 | 0.14 | 0.79 | FALSE |
21 | GTEx | Artery Aorta | DDX17 | 0.07 | 0.03 | lasso | 4 | 0.04 | 2.1e-03 | -13.01 | -12.8 | 1.8e-37 | 0.98 | 0.03 | 0.94 | FALSE |
22 | GTEx | Artery Aorta | CBY1 | 0.30 | 0.24 | lasso | 5 | 0.25 | 4.8e-14 | -12.88 | 13.0 | 1.2e-38 | -0.96 | 0.04 | 0.96 | FALSE |
23 | GTEx | Artery Aorta | C22orf23 | 0.10 | 0.01 | enet | 24 | 0.02 | 1.6e-02 | 6.47 | 5.4 | 5.8e-08 | 0.07 | 0.09 | 0.67 | FALSE |
24 | GTEx | Artery Aorta | RP3-508I15.9 | 0.24 | 0.20 | enet | 33 | 0.20 | 3.0e-11 | -12.88 | 10.9 | 1.5e-27 | -0.86 | 0.04 | 0.96 | FALSE |
25 | GTEx | Artery Aorta | AL021977.1 | 0.13 | 0.00 | enet | 17 | 0.01 | 8.7e-02 | -2.21 | 5.6 | 2.4e-08 | -0.34 | 0.08 | 0.34 | FALSE |
26 | GTEx | Artery Aorta | RP5-1039K5.17 | 0.07 | 0.04 | lasso | 2 | 0.04 | 3.0e-03 | 6.29 | 6.3 | 2.5e-10 | 0.06 | 0.11 | 0.62 | FALSE |
27 | GTEx | Artery Coronary | TRIOBP | 0.27 | 0.14 | lasso | 4 | 0.14 | 2.2e-05 | 6.80 | -6.8 | 1.0e-11 | -0.04 | 0.10 | 0.69 | FALSE |
28 | GTEx | Artery Coronary | CBY1 | 0.26 | 0.20 | lasso | 4 | 0.22 | 8.3e-08 | -12.43 | 12.7 | 3.7e-37 | -0.94 | 0.05 | 0.95 | FALSE |
29 | GTEx | Artery Coronary | RP3-508I15.9 | 0.22 | 0.24 | lasso | 4 | 0.24 | 1.6e-08 | -12.88 | 12.9 | 4.8e-38 | -0.96 | 0.03 | 0.97 | FALSE |
30 | GTEx | Artery Tibial | TRIOBP | 0.07 | 0.07 | lasso | 2 | 0.05 | 1.0e-04 | 6.85 | -6.9 | 5.6e-12 | -0.01 | 0.65 | 0.24 | FALSE |
31 | GTEx | Artery Tibial | GCAT | 0.09 | 0.09 | lasso | 2 | 0.08 | 3.5e-07 | 6.07 | 6.3 | 3.2e-10 | 0.04 | 0.40 | 0.60 | FALSE |
32 | GTEx | Artery Tibial | MICALL1 | 0.11 | 0.04 | lasso | 4 | 0.05 | 8.4e-05 | 6.60 | 6.9 | 3.9e-12 | 0.07 | 0.17 | 0.74 | FALSE |
33 | GTEx | Artery Tibial | CBY1 | 0.23 | 0.28 | lasso | 6 | 0.26 | 1.9e-20 | -12.46 | 12.5 | 4.4e-36 | -0.94 | 0.21 | 0.79 | FALSE |
34 | GTEx | Artery Tibial | TOMM22 | 0.07 | 0.10 | lasso | 3 | 0.09 | 8.2e-08 | -12.48 | 12.6 | 2.0e-36 | -0.83 | 0.07 | 0.93 | FALSE |
35 | GTEx | Artery Tibial | C22orf23 | 0.08 | 0.05 | lasso | 2 | 0.05 | 4.2e-05 | 6.58 | 6.7 | 1.6e-11 | 0.07 | 0.50 | 0.50 | FALSE |
36 | GTEx | Artery Tibial | RP3-508I15.9 | 0.18 | 0.21 | lasso | 8 | 0.21 | 1.3e-16 | -12.46 | 12.8 | 2.1e-37 | -0.95 | 0.06 | 0.94 | FALSE |
37 | GTEx | Artery Tibial | RP3-508I15.22 | 0.06 | 0.00 | enet | 23 | 0.00 | 6.5e-01 | -12.80 | -10.9 | 1.1e-27 | 0.74 | 0.05 | 0.84 | FALSE |
38 | GTEx | Brain Cerebellar Hemisphere | TOMM22 | 0.37 | -0.01 | lasso | 11 | -0.01 | 6.5e-01 | -11.07 | 9.6 | 8.3e-22 | -0.60 | 0.05 | 0.26 | FALSE |
39 | GTEx | Brain Cortex | RP3-508I15.9 | 0.21 | 0.12 | lasso | 7 | 0.10 | 1.1e-03 | -13.01 | 13.3 | 1.5e-40 | -0.99 | 0.02 | 0.96 | FALSE |
40 | GTEx | Brain Hippocampus | PICK1 | 0.30 | 0.06 | lasso | 6 | 0.03 | 6.4e-02 | 5.04 | 5.7 | 1.0e-08 | 0.02 | 0.06 | 0.05 | FALSE |
41 | GTEx | Brain Nucleus accumbens basal ganglia | PICK1 | 0.22 | -0.01 | enet | 12 | 0.01 | 2.0e-01 | 4.54 | 6.1 | 9.2e-10 | -0.26 | 0.05 | 0.10 | FALSE |
42 | GTEx | Brain Nucleus accumbens basal ganglia | CTA-228A9.3 | 0.29 | 0.01 | enet | 24 | 0.14 | 1.1e-04 | -1.66 | 5.4 | 7.8e-08 | -0.24 | 0.04 | 0.14 | TRUE |
43 | GTEx | Brain Putamen basal ganglia | RP3-508I15.9 | 0.23 | 0.00 | enet | 9 | 0.05 | 2.6e-02 | -12.29 | 8.1 | 6.2e-16 | -0.68 | 0.04 | 0.56 | FALSE |
44 | GTEx | Brain Putamen basal ganglia | RP5-1039K5.13 | 0.13 | 0.08 | lasso | 3 | 0.03 | 6.8e-02 | 6.27 | 5.8 | 7.4e-09 | 0.05 | 0.13 | 0.05 | FALSE |
45 | GTEx | Breast Mammary Tissue | TRIOBP | 0.11 | 0.10 | enet | 13 | 0.09 | 3.3e-05 | 7.04 | -6.3 | 3.6e-10 | -0.01 | 0.66 | 0.23 | FALSE |
46 | GTEx | Breast Mammary Tissue | CBY1 | 0.11 | 0.08 | lasso | 6 | 0.07 | 1.5e-04 | -12.53 | 12.7 | 3.4e-37 | -0.95 | 0.05 | 0.95 | FALSE |
47 | GTEx | Breast Mammary Tissue | RP3-508I15.9 | 0.11 | 0.14 | lasso | 3 | 0.13 | 3.6e-07 | -12.45 | 12.6 | 2.1e-36 | -0.98 | 0.03 | 0.97 | FALSE |
48 | GTEx | Breast Mammary Tissue (Male) | TRIOBP | 0.16 | 0.06 | lasso | 6 | 0.06 | 1.8e-02 | 6.72 | -6.2 | 7.7e-10 | 0.00 | 0.06 | 0.18 | FALSE |
49 | GTEx | Breast Mammary Tissue (Female) | CBY1 | 0.13 | 0.03 | lasso | 2 | 0.00 | 3.0e-01 | -11.57 | 12.4 | 4.2e-35 | -0.87 | 0.05 | 0.60 | FALSE |
50 | GTEx | Breast Mammary Tissue (Female) | RP3-508I15.9 | 0.13 | 0.12 | lasso | 3 | 0.07 | 3.6e-03 | -12.49 | 12.5 | 8.4e-36 | -0.91 | 0.04 | 0.78 | FALSE |
51 | GTEx | Cells EBV-transformed lymphocytes | JOSD1 | 0.12 | 0.12 | lasso | 7 | 0.07 | 2.0e-03 | -12.06 | 12.0 | 3.2e-33 | -0.91 | 0.04 | 0.91 | FALSE |
52 | GTEx | Cells Transformed fibroblasts | TRIOBP | 0.08 | 0.03 | enet | 11 | 0.09 | 3.0e-07 | 6.85 | -7.3 | 3.1e-13 | -0.04 | 0.66 | 0.31 | FALSE |
53 | GTEx | Cells Transformed fibroblasts | CBY1 | 0.30 | 0.47 | lasso | 2 | 0.47 | 7.7e-39 | -12.88 | 12.8 | 1.2e-37 | -0.96 | 0.03 | 0.97 | FALSE |
54 | GTEx | Cells Transformed fibroblasts | JOSD1 | 0.07 | 0.02 | enet | 4 | 0.03 | 3.1e-03 | -6.34 | 7.5 | 5.1e-14 | -0.48 | 0.06 | 0.71 | FALSE |
55 | GTEx | Cells Transformed fibroblasts | RP3-508I15.9 | 0.31 | 0.43 | lasso | 15 | 0.43 | 6.2e-35 | -12.88 | 12.9 | 3.2e-38 | -0.96 | 0.03 | 0.97 | FALSE |
56 | GTEx | Colon Sigmoid | TRIOBP | 0.28 | 0.22 | lasso | 6 | 0.22 | 2.7e-08 | 7.02 | -6.4 | 1.9e-10 | 0.01 | 0.76 | 0.19 | FALSE |
57 | GTEx | Colon Sigmoid | RP3-508I15.9 | 0.10 | 0.11 | lasso | 15 | 0.09 | 5.8e-04 | -12.46 | 12.8 | 2.1e-37 | -0.95 | 0.04 | 0.95 | FALSE |
58 | GTEx | Esophagus Gastroesophageal Junction | TRIOBP | 0.20 | -0.01 | lasso | 7 | 0.00 | 2.0e-01 | 6.72 | -5.7 | 1.0e-08 | -0.05 | 0.08 | 0.53 | FALSE |
59 | GTEx | Esophagus Gastroesophageal Junction | CBY1 | 0.14 | 0.03 | lasso | 2 | 0.05 | 8.4e-03 | 7.26 | 10.8 | 4.4e-27 | -0.63 | 0.09 | 0.46 | FALSE |
60 | GTEx | Esophagus Gastroesophageal Junction | RP3-508I15.9 | 0.12 | 0.12 | lasso | 2 | 0.09 | 3.2e-04 | -12.58 | 12.5 | 5.1e-36 | -0.94 | 0.05 | 0.85 | FALSE |
61 | GTEx | Esophagus Mucosa | TOMM22 | 0.10 | 0.02 | enet | 20 | 0.02 | 3.2e-02 | -12.21 | 8.4 | 6.3e-17 | -0.47 | 0.06 | 0.44 | FALSE |
62 | GTEx | Esophagus Mucosa | JOSD1 | 0.16 | 0.24 | lasso | 2 | 0.25 | 1.3e-16 | -12.58 | 12.9 | 2.4e-38 | -0.98 | 0.01 | 0.99 | FALSE |
63 | GTEx | Esophagus Mucosa | SUN2 | 0.12 | 0.14 | lasso | 3 | 0.14 | 1.3e-09 | -12.58 | 13.3 | 1.3e-40 | -0.95 | 0.04 | 0.96 | FALSE |
64 | GTEx | Esophagus Mucosa | RP3-508I15.14 | 0.11 | 0.08 | lasso | 7 | 0.07 | 2.1e-05 | -12.74 | 12.8 | 2.5e-37 | -0.97 | 0.03 | 0.97 | FALSE |
65 | GTEx | Esophagus Mucosa | RP3-508I15.19 | 0.08 | 0.06 | lasso | 1 | 0.06 | 1.1e-04 | -12.58 | 12.6 | 2.6e-36 | -0.94 | 0.03 | 0.96 | FALSE |
66 | GTEx | Esophagus Muscularis | TRIOBP | 0.07 | 0.06 | lasso | 3 | 0.06 | 1.7e-04 | 6.54 | -7.7 | 2.0e-14 | -0.04 | 0.04 | 0.94 | FALSE |
67 | GTEx | Esophagus Muscularis | GCAT | 0.11 | 0.12 | lasso | 3 | 0.12 | 1.1e-07 | 6.97 | 7.2 | 5.2e-13 | 0.01 | 0.04 | 0.96 | FALSE |
68 | GTEx | Esophagus Muscularis | DDX17 | 0.08 | 0.10 | lasso | 1 | 0.07 | 3.9e-05 | -12.06 | -12.1 | 1.8e-33 | 0.91 | 0.05 | 0.94 | TRUE |
69 | GTEx | Esophagus Muscularis | CBY1 | 0.15 | 0.16 | lasso | 2 | 0.14 | 1.2e-08 | -12.46 | 12.5 | 1.2e-35 | -0.92 | 0.18 | 0.82 | FALSE |
70 | GTEx | Esophagus Muscularis | RP3-508I15.9 | 0.13 | 0.12 | enet | 23 | 0.10 | 1.1e-06 | -12.43 | 12.8 | 1.6e-37 | -0.94 | 0.05 | 0.95 | FALSE |
71 | GTEx | Heart Atrial Appendage | TRIOBP | 0.15 | 0.13 | lasso | 6 | 0.11 | 1.3e-05 | 6.85 | -7.0 | 2.0e-12 | -0.02 | 0.70 | 0.21 | FALSE |
72 | GTEx | Heart Left Ventricle | TRIOBP | 0.16 | 0.04 | lasso | 4 | 0.08 | 6.2e-05 | 6.85 | -6.9 | 7.1e-12 | -0.03 | 0.07 | 0.92 | FALSE |
73 | GTEx | Lung | TRIOBP | 0.16 | 0.10 | enet | 10 | 0.12 | 8.7e-10 | 6.85 | -6.6 | 4.6e-11 | -0.01 | 0.99 | 0.00 | FALSE |
74 | GTEx | Lung | GCAT | 0.10 | 0.09 | lasso | 2 | 0.07 | 9.7e-06 | 7.04 | 7.1 | 1.2e-12 | 0.00 | 0.58 | 0.42 | FALSE |
75 | GTEx | Lung | TOMM22 | 0.05 | 0.04 | enet | 11 | 0.04 | 3.8e-04 | -12.06 | 13.3 | 3.2e-40 | -0.89 | 0.04 | 0.95 | FALSE |
76 | GTEx | Lung | RP3-508I15.9 | 0.10 | 0.15 | lasso | 2 | 0.14 | 1.5e-10 | -12.46 | 12.5 | 5.4e-36 | -0.93 | 0.10 | 0.90 | FALSE |
77 | GTEx | Lung | RP3-508I15.22 | 0.05 | 0.04 | lasso | 1 | 0.03 | 1.8e-03 | -11.57 | -11.6 | 5.8e-31 | 0.79 | 0.22 | 0.30 | FALSE |
78 | GTEx | Muscle Skeletal | GCAT | 0.13 | 0.10 | enet | 17 | 0.10 | 3.9e-10 | 6.97 | 6.6 | 3.1e-11 | 0.00 | 0.99 | 0.01 | FALSE |
79 | GTEx | Muscle Skeletal | TOMM22 | 0.03 | 0.02 | lasso | 4 | 0.01 | 2.2e-02 | -12.48 | 13.0 | 8.3e-39 | -0.94 | 0.04 | 0.93 | FALSE |
80 | GTEx | Nerve Tibial | TRIOBP | 0.20 | 0.18 | lasso | 7 | 0.22 | 9.1e-16 | 6.72 | -7.3 | 3.7e-13 | -0.03 | 0.85 | 0.15 | FALSE |
81 | GTEx | Nerve Tibial | SLC16A8 | 0.16 | 0.21 | enet | 7 | 0.21 | 8.3e-15 | 4.61 | 5.1 | 2.8e-07 | 0.03 | 1.00 | 0.00 | FALSE |
82 | GTEx | Nerve Tibial | DDX17 | 0.10 | 0.09 | lasso | 5 | 0.07 | 1.2e-05 | -12.53 | -12.5 | 4.0e-36 | 0.95 | 0.19 | 0.80 | FALSE |
83 | GTEx | Nerve Tibial | CBY1 | 0.22 | 0.32 | lasso | 11 | 0.34 | 1.0e-24 | -12.43 | 12.8 | 1.6e-37 | -0.95 | 0.04 | 0.96 | FALSE |
84 | GTEx | Nerve Tibial | TOMM22 | 0.11 | 0.08 | lasso | 4 | 0.08 | 5.2e-06 | -12.53 | 12.9 | 3.3e-38 | -0.92 | 0.08 | 0.89 | TRUE |
85 | GTEx | Nerve Tibial | FOXRED2 | 0.26 | 0.16 | lasso | 5 | 0.16 | 4.3e-11 | 7.13 | 6.5 | 6.5e-11 | 0.00 | 0.20 | 0.80 | FALSE |
86 | GTEx | Nerve Tibial | RP3-508I15.9 | 0.26 | 0.38 | lasso | 10 | 0.40 | 5.6e-30 | -12.84 | 12.8 | 1.2e-37 | -0.95 | 0.04 | 0.96 | FALSE |
87 | GTEx | Nerve Tibial | CTA-228A9.3 | 0.08 | 0.07 | enet | 13 | 0.09 | 1.0e-06 | 4.61 | 6.0 | 2.6e-09 | 0.03 | 0.57 | 0.02 | FALSE |
88 | GTEx | Ovary | CBY1 | 0.23 | 0.22 | lasso | 13 | 0.20 | 9.9e-06 | -11.54 | 12.4 | 3.7e-35 | -0.87 | 0.05 | 0.92 | FALSE |
89 | GTEx | Ovary | RP3-508I15.9 | 0.19 | 0.28 | lasso | 2 | 0.24 | 1.1e-06 | -11.54 | 11.5 | 7.6e-31 | -0.82 | 0.06 | 0.92 | FALSE |
90 | GTEx | Pancreas | GCAT | 0.32 | 0.23 | lasso | 6 | 0.26 | 2.4e-11 | 8.27 | -8.6 | 8.3e-18 | -0.03 | 0.01 | 0.99 | TRUE |
91 | GTEx | Pancreas | CBY1 | 0.14 | 0.00 | enet | 11 | -0.01 | 7.1e-01 | -2.16 | -9.4 | 4.3e-21 | 0.61 | 0.03 | 0.62 | FALSE |
92 | GTEx | Pancreas | TOMM22 | 0.10 | 0.08 | lasso | 6 | 0.09 | 1.4e-04 | -12.38 | 12.1 | 1.1e-33 | -0.92 | 0.08 | 0.90 | FALSE |
93 | GTEx | Pituitary | FOXRED2 | 0.43 | 0.32 | lasso | 6 | 0.33 | 3.5e-09 | 7.87 | 8.1 | 5.5e-16 | -0.01 | 0.00 | 1.00 | FALSE |
94 | GTEx | Pituitary | RP3-508I15.9 | 0.20 | -0.01 | lasso | 5 | -0.01 | 4.8e-01 | -4.00 | 5.6 | 1.9e-08 | -0.29 | 0.06 | 0.14 | FALSE |
95 | GTEx | Skin Not Sun Exposed Suprapubic | TRIOBP | 0.12 | 0.04 | lasso | 3 | 0.05 | 7.0e-04 | 6.80 | -6.7 | 1.9e-11 | -0.02 | 0.48 | 0.21 | FALSE |
96 | GTEx | Skin Not Sun Exposed Suprapubic | TOMM22 | 0.13 | 0.11 | lasso | 6 | 0.11 | 7.9e-07 | -12.58 | 13.1 | 2.3e-39 | -0.96 | 0.06 | 0.93 | FALSE |
97 | GTEx | Skin Not Sun Exposed Suprapubic | JOSD1 | 0.12 | 0.13 | lasso | 4 | 0.12 | 4.9e-07 | -12.88 | 12.8 | 1.2e-37 | -0.96 | 0.03 | 0.97 | FALSE |
98 | GTEx | Skin Not Sun Exposed Suprapubic | SUN2 | 0.13 | 0.00 | enet | 36 | 0.02 | 2.9e-02 | -12.75 | 10.7 | 8.5e-27 | -0.76 | 0.03 | 0.93 | FALSE |
99 | GTEx | Skin Not Sun Exposed Suprapubic | RP3-508I15.9 | 0.17 | 0.17 | lasso | 3 | 0.17 | 1.4e-09 | -12.82 | 12.8 | 1.1e-37 | -0.96 | 0.03 | 0.97 | FALSE |
100 | GTEx | Skin Not Sun Exposed Suprapubic | RP3-508I15.19 | 0.14 | 0.06 | enet | 39 | 0.03 | 7.8e-03 | -12.75 | 11.7 | 1.9e-31 | -0.81 | 0.03 | 0.95 | FALSE |
101 | GTEx | Skin Not Sun Exposed Suprapubic | RP3-508I15.22 | 0.08 | 0.00 | lasso | 5 | 0.01 | 6.0e-02 | -5.55 | -10.0 | 1.0e-23 | 0.80 | 0.09 | 0.69 | FALSE |
102 | GTEx | Skin Sun Exposed Lower leg | TRIOBP | 0.06 | 0.06 | lasso | 4 | 0.06 | 1.7e-05 | 6.80 | -7.0 | 2.6e-12 | -0.02 | 0.76 | 0.17 | FALSE |
103 | GTEx | Skin Sun Exposed Lower leg | DDX17 | 0.05 | 0.04 | lasso | 4 | 0.02 | 4.7e-03 | -12.49 | -12.8 | 1.5e-37 | 0.93 | 0.04 | 0.96 | FALSE |
104 | GTEx | Skin Sun Exposed Lower leg | CBY1 | 0.11 | 0.13 | enet | 22 | 0.12 | 2.1e-10 | -12.43 | 12.4 | 2.1e-35 | -0.89 | 0.29 | 0.71 | FALSE |
105 | GTEx | Skin Sun Exposed Lower leg | TOMM22 | 0.07 | 0.07 | lasso | 4 | 0.07 | 3.2e-06 | -12.38 | 12.4 | 3.3e-35 | -0.92 | 0.19 | 0.80 | FALSE |
106 | GTEx | Skin Sun Exposed Lower leg | JOSD1 | 0.09 | 0.15 | lasso | 2 | 0.14 | 1.7e-11 | -12.74 | 12.7 | 3.2e-37 | -0.96 | 0.04 | 0.96 | FALSE |
107 | GTEx | Skin Sun Exposed Lower leg | SUN2 | 0.06 | 0.06 | lasso | 3 | 0.05 | 5.3e-05 | -12.58 | 12.6 | 2.3e-36 | -0.93 | 0.05 | 0.94 | FALSE |
108 | GTEx | Skin Sun Exposed Lower leg | RP3-508I15.14 | 0.06 | 0.06 | lasso | 3 | 0.04 | 3.3e-04 | -12.58 | 12.7 | 4.1e-37 | -0.96 | 0.02 | 0.98 | FALSE |
109 | GTEx | Skin Sun Exposed Lower leg | RP3-508I15.9 | 0.22 | 0.28 | lasso | 10 | 0.30 | 1.6e-25 | -12.75 | 12.9 | 4.8e-38 | -0.95 | 0.04 | 0.96 | FALSE |
110 | GTEx | Skin Sun Exposed Lower leg | RP3-508I15.19 | 0.05 | 0.04 | lasso | 2 | 0.04 | 4.9e-04 | -12.58 | 12.3 | 7.3e-35 | -0.90 | 0.06 | 0.88 | FALSE |
111 | GTEx | Spleen | RP3-508I15.9 | 0.18 | 0.03 | lasso | 4 | 0.03 | 7.4e-02 | -5.55 | 7.0 | 3.4e-12 | -0.61 | 0.05 | 0.72 | FALSE |
112 | GTEx | Stomach | TRIOBP | 0.10 | 0.03 | lasso | 5 | 0.03 | 1.9e-02 | 6.72 | -7.3 | 3.3e-13 | -0.01 | 0.11 | 0.50 | FALSE |
113 | GTEx | Testis | TOMM22 | 0.10 | 0.00 | enet | 23 | 0.01 | 8.4e-02 | -11.57 | 9.2 | 2.5e-20 | -0.53 | 0.06 | 0.46 | FALSE |
114 | GTEx | Testis | GTPBP1 | 0.13 | 0.12 | lasso | 8 | 0.17 | 4.3e-08 | -12.53 | 11.7 | 1.0e-31 | -0.92 | 0.05 | 0.95 | TRUE |
115 | GTEx | Testis | AL021707.1 | 0.12 | 0.02 | lasso | 4 | 0.05 | 3.4e-03 | -12.88 | 11.5 | 1.3e-30 | -0.91 | 0.04 | 0.81 | FALSE |
116 | GTEx | Testis | RP3-508I15.9 | 0.13 | 0.11 | lasso | 4 | 0.13 | 1.6e-06 | -12.58 | 12.8 | 1.0e-37 | -0.96 | 0.03 | 0.97 | FALSE |
117 | GTEx | Thyroid | TOMM22 | 0.06 | 0.09 | lasso | 1 | 0.07 | 9.8e-06 | -12.30 | 12.3 | 8.5e-35 | -0.85 | 0.39 | 0.56 | FALSE |
118 | GTEx | Thyroid | FOXRED2 | 0.26 | 0.10 | lasso | 9 | 0.08 | 7.6e-07 | 7.13 | 6.3 | 2.2e-10 | 0.00 | 0.21 | 0.78 | FALSE |
119 | GTEx | Thyroid | RP3-508I15.22 | 0.09 | 0.09 | lasso | 6 | 0.09 | 4.1e-07 | -11.50 | -10.4 | 3.0e-25 | 0.70 | 0.83 | 0.08 | FALSE |
120 | GTEx | Uterus | RP3-508I15.9 | 0.15 | 0.09 | lasso | 4 | 0.09 | 8.2e-03 | -12.38 | 12.5 | 9.2e-36 | -0.92 | 0.06 | 0.74 | FALSE |
121 | GTEx | Vagina | RP3-508I15.14 | 0.33 | -0.01 | lasso | 5 | 0.02 | 1.4e-01 | 0.58 | 8.2 | 1.8e-16 | -0.57 | 0.04 | 0.36 | FALSE |
122 | GTEx | Vagina | RP3-508I15.9 | 0.29 | 0.21 | lasso | 4 | 0.14 | 3.8e-04 | -12.46 | 12.7 | 3.3e-37 | -0.94 | 0.04 | 0.92 | FALSE |
123 | GTEx | Whole Blood | TRIOBP | 0.18 | 0.05 | enet | 29 | 0.14 | 1.7e-12 | 6.72 | -6.1 | 8.9e-10 | -0.02 | 0.83 | 0.16 | FALSE |
124 | GTEx | Whole Blood | DDX17 | 0.05 | 0.00 | lasso | 4 | 0.00 | 4.1e-01 | -12.29 | -13.4 | 3.5e-41 | 0.93 | 0.04 | 0.75 | FALSE |
125 | NTR | Blood | DDX17 | 0.02 | 0.03 | lasso | 3 | 0.03 | 8.8e-10 | -11.85 | -12.5 | 7.9e-36 | 0.89 | 0.12 | 0.88 | FALSE |
126 | NTR | Blood | SH3BP1 | 0.02 | 0.00 | blup | 497 | 0.01 | 5.0e-03 | 4.49 | 6.3 | 2.4e-10 | 0.05 | 0.05 | 0.46 | FALSE |
127 | NTR | Blood | SUN2 | 0.03 | 0.02 | bslmm | 388 | 0.03 | 4.3e-09 | -11.28 | -11.8 | 6.5e-32 | 0.71 | 0.99 | 0.00 | FALSE |
128 | ROSMAP | Brain Pre-frontal Cortex | ANKRD54 | 0.03 | 0.00 | blup | 397 | 0.01 | 2.2e-02 | 6.28 | -5.9 | 4.7e-09 | -0.02 | 0.09 | 0.54 | FALSE |
129 | YFS | Blood | FOXRED2 | 0.21 | 0.15 | enet | 67 | 0.18 | 2.8e-56 | 5.98 | 8.4 | 5.2e-17 | 0.03 | 1.00 | 0.00 | TRUE |
130 | YFS | Blood | JOSD1 | 0.03 | 0.03 | bslmm | 347 | 0.03 | 1.9e-10 | -12.84 | 8.9 | 4.6e-19 | -0.80 | 0.04 | 0.96 | FALSE |
131 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | JOSD1 | 0.02 | 0.01 | blup | 49 | 0.02 | 1.4e-02 | -12.74 | 12.7 | 9.3e-37 | -0.97 | 0.02 | 0.71 | FALSE |
132 | The Cancer Genome Atlas | Breast Invasive Carcinoma | DDX17 | 0.03 | 0.01 | enet | 9 | 0.01 | 5.3e-03 | -11.85 | 7.8 | 7.5e-15 | -0.58 | 0.01 | 0.58 | FALSE |
133 | The Cancer Genome Atlas | Breast Invasive Carcinoma | DNAL4 | 0.03 | 0.01 | blup | 46 | 0.01 | 1.6e-03 | 6.73 | 8.8 | 1.6e-18 | -0.43 | 0.30 | 0.06 | FALSE |
134 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FOXRED2 | 0.03 | 0.02 | enet | 5 | 0.02 | 3.0e-05 | 6.88 | 7.6 | 4.0e-14 | -0.01 | 0.00 | 0.99 | FALSE |
135 | The Cancer Genome Atlas | Breast Invasive Carcinoma | JOSD1 | 0.02 | 0.01 | lasso | 3 | 0.02 | 2.0e-05 | 7.98 | 11.5 | 1.6e-30 | -0.86 | 0.03 | 0.97 | FALSE |
136 | The Cancer Genome Atlas | Breast Invasive Carcinoma | NPTXR | 0.02 | 0.01 | blup | 37 | 0.01 | 2.6e-02 | -6.22 | 5.8 | 6.8e-09 | -0.26 | 0.04 | 0.08 | TRUE |
137 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SUN2 | 0.01 | 0.00 | blup | 60 | 0.00 | 1.4e-01 | 6.73 | 11.9 | 9.3e-33 | -0.75 | 0.01 | 0.30 | FALSE |
138 | The Cancer Genome Atlas | Breast Invasive Carcinoma | TOMM22 | 0.02 | 0.01 | enet | 11 | 0.01 | 1.1e-03 | -12.35 | 11.2 | 2.4e-29 | -0.85 | 0.05 | 0.87 | FALSE |
139 | The Cancer Genome Atlas | Breast Invasive Carcinoma | TRIOBP | 0.04 | 0.05 | enet | 16 | 0.06 | 3.0e-13 | 6.74 | -7.2 | 4.2e-13 | -0.03 | 0.87 | 0.13 | FALSE |
140 | The Cancer Genome Atlas | Colon Adenocarcinoma | CBY1 | 0.07 | 0.11 | enet | 18 | 0.10 | 1.2e-06 | -12.83 | -12.8 | 1.5e-37 | 0.96 | 0.02 | 0.98 | FALSE |
141 | The Cancer Genome Atlas | Colon Adenocarcinoma | GCAT | 0.09 | 0.08 | enet | 6 | 0.08 | 3.1e-05 | 7.02 | 6.3 | 2.4e-10 | -0.02 | 0.15 | 0.53 | FALSE |
142 | The Cancer Genome Atlas | Colon Adenocarcinoma | JOSD1 | 0.05 | 0.02 | blup | 50 | 0.04 | 2.7e-03 | -12.30 | 13.1 | 2.9e-39 | -0.94 | 0.05 | 0.78 | FALSE |
143 | The Cancer Genome Atlas | Glioblastoma Multiforme | GALR3 | 0.09 | 0.04 | blup | 27 | 0.06 | 8.8e-03 | 6.07 | 7.5 | 6.9e-14 | 0.04 | 0.02 | 0.56 | FALSE |
144 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | JOSD1 | 0.08 | 0.03 | enet | 5 | 0.04 | 3.4e-05 | -10.64 | 12.3 | 1.6e-34 | -0.87 | 0.07 | 0.90 | FALSE |
145 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CBX6 | 0.06 | 0.02 | blup | 23 | 0.04 | 8.7e-06 | -6.27 | 5.5 | 2.9e-08 | -0.24 | 0.54 | 0.13 | FALSE |
146 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DNAL4 | 0.04 | 0.02 | blup | 46 | 0.03 | 1.1e-04 | 7.26 | 9.3 | 1.3e-20 | -0.53 | 0.06 | 0.15 | FALSE |
147 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FOXRED2 | 0.07 | 0.06 | enet | 4 | 0.07 | 5.3e-08 | 6.88 | 7.1 | 1.7e-12 | 0.02 | 0.01 | 0.99 | FALSE |
148 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LOC646851 | 0.02 | 0.03 | lasso | 1 | 0.02 | 1.2e-03 | -12.75 | -12.8 | 2.9e-37 | 0.95 | 0.02 | 0.82 | FALSE |
149 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TRIOBP | 0.11 | 0.09 | enet | 10 | 0.11 | 5.5e-12 | 6.80 | -6.8 | 9.1e-12 | -0.02 | 0.96 | 0.04 | FALSE |
150 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FOXRED2 | 0.13 | 0.08 | lasso | 2 | 0.08 | 2.5e-05 | 7.13 | 7.5 | 8.4e-14 | 0.01 | 0.00 | 1.00 | FALSE |
151 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | TRIOBP | 0.12 | 0.14 | enet | 8 | 0.12 | 3.1e-07 | 6.87 | -6.1 | 1.4e-09 | -0.04 | 0.67 | 0.31 | FALSE |
152 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ANKRD54 | 0.05 | 0.01 | blup | 31 | 0.02 | 1.3e-03 | 7.04 | -6.9 | 6.4e-12 | 0.02 | 0.04 | 0.50 | FALSE |
153 | The Cancer Genome Atlas | Brain Lower Grade Glioma | GALR3 | 0.04 | 0.04 | lasso | 2 | 0.05 | 3.4e-06 | 6.54 | 6.6 | 3.1e-11 | 0.07 | 0.20 | 0.76 | FALSE |
154 | The Cancer Genome Atlas | Brain Lower Grade Glioma | GCAT | 0.07 | 0.06 | lasso | 4 | 0.06 | 2.0e-07 | 8.26 | -8.4 | 4.1e-17 | -0.02 | 0.00 | 1.00 | FALSE |
155 | The Cancer Genome Atlas | Brain Lower Grade Glioma | GTPBP1 | 0.02 | 0.02 | blup | 57 | 0.02 | 8.6e-04 | -12.06 | 12.9 | 3.5e-38 | -0.94 | 0.02 | 0.85 | FALSE |
156 | The Cancer Genome Atlas | Brain Lower Grade Glioma | KDELR3 | 0.07 | 0.03 | blup | 49 | 0.02 | 8.2e-04 | 0.03 | -6.1 | 1.2e-09 | 0.46 | 0.03 | 0.45 | FALSE |
157 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LOC646851 | 0.13 | 0.11 | enet | 18 | 0.12 | 2.9e-13 | -12.46 | -11.1 | 1.1e-28 | 0.78 | 0.38 | 0.62 | FALSE |
158 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TRIOBP | 0.08 | 0.07 | enet | 11 | 0.08 | 6.1e-09 | 6.77 | -7.1 | 1.7e-12 | -0.02 | 0.47 | 0.53 | FALSE |
159 | The Cancer Genome Atlas | Lung Adenocarcinoma | DNAL4 | 0.03 | 0.01 | blup | 46 | 0.00 | 1.6e-01 | 6.73 | 10.7 | 8.4e-27 | -0.65 | 0.02 | 0.35 | FALSE |
160 | The Cancer Genome Atlas | Lung Adenocarcinoma | GTPBP1 | 0.02 | 0.04 | lasso | 3 | 0.03 | 2.5e-04 | -12.58 | 12.6 | 1.3e-36 | -0.94 | 0.05 | 0.87 | FALSE |
161 | The Cancer Genome Atlas | Lung Adenocarcinoma | JOSD1 | 0.04 | 0.05 | lasso | 4 | 0.05 | 7.4e-07 | -12.39 | 12.7 | 8.6e-37 | -0.98 | 0.04 | 0.96 | FALSE |
162 | The Cancer Genome Atlas | Lung Adenocarcinoma | TOMM22 | 0.02 | 0.02 | blup | 43 | 0.02 | 1.7e-03 | -12.38 | 12.9 | 3.3e-38 | -0.95 | 0.03 | 0.85 | FALSE |
163 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | DNAL4 | 0.09 | 0.02 | blup | 45 | 0.04 | 6.1e-05 | 6.54 | 5.1 | 2.8e-07 | -0.14 | 0.15 | 0.02 | FALSE |
164 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | DNAL4 | 0.07 | 0.01 | blup | 46 | 0.03 | 7.4e-03 | 5.77 | 8.9 | 7.0e-19 | -0.49 | 0.04 | 0.10 | FALSE |
165 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | LOC646851 | 0.08 | 0.06 | blup | 47 | 0.07 | 8.1e-04 | -12.06 | -13.2 | 5.4e-40 | 0.95 | 0.03 | 0.91 | FALSE |
166 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | TOMM22 | 0.07 | 0.03 | blup | 43 | 0.04 | 8.8e-03 | -12.38 | 12.3 | 1.4e-34 | -0.92 | 0.03 | 0.73 | FALSE |
167 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CBY1 | 0.03 | 0.01 | blup | 40 | 0.02 | 4.2e-03 | -12.80 | -12.1 | 1.3e-33 | 0.94 | 0.02 | 0.86 | FALSE |
168 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FOXRED2 | 0.12 | 0.08 | enet | 12 | 0.09 | 9.1e-10 | 6.88 | 6.5 | 1.1e-10 | 0.02 | 0.00 | 1.00 | FALSE |
169 | The Cancer Genome Atlas | Prostate Adenocarcinoma | GALR3 | 0.11 | 0.16 | lasso | 4 | 0.15 | 4.9e-15 | 8.45 | 8.4 | 4.3e-17 | 0.02 | 0.00 | 1.00 | FALSE |
170 | The Cancer Genome Atlas | Prostate Adenocarcinoma | LOC646851 | 0.03 | 0.03 | blup | 48 | 0.03 | 2.7e-04 | -12.06 | -12.9 | 7.7e-38 | 0.96 | 0.02 | 0.95 | FALSE |
171 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TRIOBP | 0.07 | 0.04 | blup | 67 | 0.03 | 2.1e-04 | 5.78 | -7.1 | 1.5e-12 | -0.04 | 0.81 | 0.05 | FALSE |
172 | The Cancer Genome Atlas | Rectum Adenocarcinoma | NPTXR | 0.83 | 0.05 | enet | 16 | 0.24 | 2.2e-06 | -5.29 | 5.8 | 5.4e-09 | -0.23 | 0.00 | 0.06 | FALSE |
173 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FOXRED2 | 0.08 | 0.04 | enet | 11 | 0.05 | 1.9e-04 | 5.98 | 6.5 | 7.9e-11 | 0.01 | 0.05 | 0.93 | FALSE |
174 | The Cancer Genome Atlas | Stomach Adenocarcinoma | LOC646851 | 0.04 | 0.03 | enet | 10 | 0.04 | 1.1e-03 | -12.75 | -10.1 | 8.3e-24 | 0.75 | 0.02 | 0.73 | FALSE |
175 | The Cancer Genome Atlas | Thyroid Carcinoma | CBX6 | 0.13 | 0.02 | enet | 3 | 0.03 | 5.6e-04 | -5.53 | 5.7 | 1.5e-08 | -0.27 | 0.05 | 0.08 | FALSE |
176 | The Cancer Genome Atlas | Thyroid Carcinoma | DNAL4 | 0.43 | 0.06 | enet | 22 | 0.11 | 4.6e-11 | -4.80 | 6.5 | 9.6e-11 | -0.10 | 0.84 | 0.00 | FALSE |
177 | The Cancer Genome Atlas | Thyroid Carcinoma | FOXRED2 | 0.18 | 0.09 | enet | 23 | 0.10 | 1.3e-09 | 6.88 | 7.0 | 2.9e-12 | 0.00 | 0.00 | 1.00 | FALSE |
178 | The Cancer Genome Atlas | Thyroid Carcinoma | GCAT | 0.02 | 0.03 | blup | 29 | 0.03 | 1.4e-03 | 6.97 | 7.8 | 5.3e-15 | 0.01 | 0.02 | 0.66 | FALSE |
179 | The Cancer Genome Atlas | Thyroid Carcinoma | JOSD1 | 0.12 | 0.02 | blup | 49 | 0.05 | 5.2e-06 | -12.06 | 10.4 | 1.7e-25 | -0.78 | 0.03 | 0.96 | FALSE |
180 | The Cancer Genome Atlas | Thyroid Carcinoma | LOC646851 | 0.02 | 0.03 | lasso | 3 | 0.01 | 1.4e-02 | -12.06 | -12.1 | 7.4e-34 | 0.91 | 0.02 | 0.80 | FALSE |
181 | The Cancer Genome Atlas | Thyroid Carcinoma | POLR2F | 0.02 | 0.02 | blup | 34 | 0.02 | 9.4e-03 | 6.15 | 6.3 | 2.8e-10 | 0.05 | 0.01 | 0.76 | FALSE |
182 | The Cancer Genome Atlas | Thyroid Carcinoma | TOMM22 | 0.06 | 0.04 | lasso | 3 | 0.04 | 1.1e-04 | -12.38 | 13.1 | 2.1e-39 | -0.93 | 0.06 | 0.93 | TRUE |
183 | The Cancer Genome Atlas | Thyroid Carcinoma | TRIOBP | 0.22 | 0.25 | enet | 37 | 0.27 | 6.9e-26 | 6.69 | -6.7 | 1.8e-11 | -0.02 | 1.00 | 0.00 | FALSE |
184 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | GCAT | 0.17 | 0.05 | blup | 29 | 0.07 | 4.8e-03 | 6.07 | -5.8 | 7.4e-09 | -0.06 | 0.03 | 0.33 | FALSE |
185 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | LOC646851 | 0.16 | 0.05 | lasso | 9 | 0.04 | 2.7e-02 | -10.65 | -10.4 | 3.6e-25 | 0.76 | 0.01 | 0.24 | FALSE |