Best TWAS P=7.5e-33 · Best GWAS P=4.17e-31 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CCDC57 | 0.27 | 0.27 | lasso | 4 | 0.26 | 1.6e-31 | 7.331 | -7.3 | 3.5e-13 | 0.01 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | FN3KRP | 0.49 | 0.28 | bslmm | 365 | 0.41 | 5.6e-54 | -6.839 | -6.5 | 7.6e-11 | -0.04 | 0.96 | 0.04 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | LRRC45 | 0.09 | 0.10 | enet | 7 | 0.10 | 1.2e-11 | -11.506 | 11.6 | 2.9e-31 | -0.86 | 0.00 | 1.00 | TRUE |
4 | CommonMind | Brain Pre-frontal Cortex | MYADML2 | 0.52 | 0.43 | enet | 15 | 0.45 | 3.6e-60 | -7.659 | -7.4 | 1.2e-13 | 0.36 | 1.00 | 0.00 | TRUE |
5 | CommonMind | Brain Pre-frontal Cortex | STRA13 | 0.45 | 0.38 | lasso | 4 | 0.40 | 1.6e-51 | -10.928 | 11.2 | 4.3e-29 | -0.95 | 0.19 | 0.81 | FALSE |
6 | GTEx | Adipose Subcutaneous | TBCD | 0.12 | 0.05 | lasso | 4 | 0.06 | 6.7e-06 | -4.769 | 5.2 | 2.4e-07 | -0.08 | 0.96 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | FN3KRP | 0.56 | 0.23 | lasso | 11 | 0.48 | 1.2e-44 | 6.922 | -6.9 | 5.4e-12 | 0.00 | 0.93 | 0.07 | FALSE |
8 | GTEx | Adipose Subcutaneous | LRRC45 | 0.23 | 0.06 | lasso | 3 | 0.05 | 1.0e-04 | -11.503 | 10.8 | 4.3e-27 | -0.72 | 0.00 | 0.99 | FALSE |
9 | GTEx | Adipose Subcutaneous | STRA13 | 0.28 | 0.26 | lasso | 3 | 0.26 | 5.0e-21 | -10.928 | 10.9 | 1.1e-27 | -0.92 | 0.78 | 0.22 | FALSE |
10 | GTEx | Adipose Subcutaneous | CCDC57 | 0.15 | 0.14 | enet | 9 | 0.16 | 3.2e-13 | 7.229 | 7.4 | 1.1e-13 | -0.04 | 1.00 | 0.00 | FALSE |
11 | GTEx | Adipose Subcutaneous | RP11-1055B8.4 | 0.33 | 0.12 | lasso | 7 | 0.14 | 3.2e-11 | 10.909 | -10.3 | 4.7e-25 | 0.05 | 0.00 | 1.00 | FALSE |
12 | GTEx | Adipose Subcutaneous | RP11-1376P16.2 | 0.06 | 0.04 | enet | 10 | 0.03 | 3.5e-03 | -6.074 | 6.4 | 1.2e-10 | -0.05 | 0.86 | 0.01 | FALSE |
13 | GTEx | Adipose Visceral Omentum | FN3KRP | 0.52 | 0.40 | enet | 26 | 0.47 | 3.5e-27 | 6.922 | -8.1 | 7.3e-16 | 0.00 | 0.93 | 0.07 | TRUE |
14 | GTEx | Adipose Visceral Omentum | LRRC45 | 0.18 | 0.03 | enet | 12 | 0.10 | 9.0e-06 | -11.452 | 10.8 | 5.0e-27 | -0.85 | 0.01 | 0.99 | FALSE |
15 | GTEx | Adipose Visceral Omentum | STRA13 | 0.18 | 0.15 | lasso | 4 | 0.14 | 8.0e-08 | -10.928 | -11.3 | 1.1e-29 | 0.91 | 0.20 | 0.78 | FALSE |
16 | GTEx | Adipose Visceral Omentum | CCDC57 | 0.29 | 0.16 | enet | 26 | 0.13 | 3.0e-07 | 7.229 | 6.2 | 4.6e-10 | -0.02 | 0.98 | 0.00 | TRUE |
17 | GTEx | Adrenal Gland | FN3KRP | 0.41 | 0.35 | enet | 33 | 0.36 | 8.7e-14 | 6.922 | -7.0 | 1.9e-12 | 0.00 | 0.93 | 0.07 | FALSE |
18 | GTEx | Artery Aorta | FN3KRP | 0.60 | 0.33 | lasso | 14 | 0.52 | 1.4e-32 | 6.922 | -6.8 | 7.8e-12 | 0.00 | 0.92 | 0.08 | FALSE |
19 | GTEx | Artery Aorta | STRA13 | 0.20 | 0.14 | enet | 16 | 0.11 | 7.9e-07 | -10.928 | 10.4 | 2.4e-25 | -0.81 | 0.13 | 0.85 | FALSE |
20 | GTEx | Artery Aorta | CCDC57 | 0.07 | 0.04 | lasso | 5 | 0.05 | 1.5e-03 | 7.050 | 6.4 | 1.8e-10 | 0.03 | 0.42 | 0.04 | FALSE |
21 | GTEx | Artery Coronary | FN3KRP | 0.60 | 0.29 | enet | 72 | 0.33 | 9.0e-12 | 6.922 | -6.1 | 1.2e-09 | -0.04 | 0.92 | 0.07 | FALSE |
22 | GTEx | Artery Coronary | LRRC45 | 0.18 | 0.00 | enet | 22 | 0.00 | 3.8e-01 | -10.347 | 8.0 | 1.2e-15 | -0.50 | 0.03 | 0.42 | FALSE |
23 | GTEx | Artery Tibial | SLC16A3 | 0.08 | 0.06 | lasso | 2 | 0.04 | 4.9e-04 | -6.074 | 6.5 | 5.9e-11 | -0.03 | 0.30 | 0.05 | FALSE |
24 | GTEx | Artery Tibial | FN3KRP | 0.51 | 0.36 | enet | 32 | 0.61 | 3.7e-59 | 6.922 | -7.2 | 7.7e-13 | 0.02 | 0.93 | 0.07 | FALSE |
25 | GTEx | Artery Tibial | LRRC45 | 0.09 | 0.07 | lasso | 4 | 0.04 | 2.0e-04 | -11.503 | 11.7 | 1.9e-31 | -0.75 | 0.01 | 0.99 | FALSE |
26 | GTEx | Artery Tibial | STRA13 | 0.37 | 0.22 | enet | 14 | 0.22 | 1.6e-17 | -10.928 | 9.1 | 1.2e-19 | -0.89 | 0.70 | 0.30 | FALSE |
27 | GTEx | Artery Tibial | CCDC57 | 0.08 | 0.03 | enet | 7 | 0.05 | 5.8e-05 | -6.074 | 8.4 | 4.6e-17 | -0.18 | 0.71 | 0.05 | FALSE |
28 | GTEx | Brain Caudate basal ganglia | CCDC57 | 0.14 | 0.16 | lasso | 5 | 0.10 | 8.3e-04 | 5.684 | 5.9 | 4.6e-09 | -0.09 | 0.57 | 0.02 | FALSE |
29 | GTEx | Brain Cerebellar Hemisphere | CCDC57 | 0.36 | 0.35 | lasso | 2 | 0.34 | 1.9e-09 | -6.682 | 6.5 | 5.7e-11 | -0.09 | 0.99 | 0.00 | FALSE |
30 | GTEx | Brain Cerebellum | CCDC57 | 0.40 | 0.44 | lasso | 21 | 0.42 | 7.1e-14 | -6.678 | 6.6 | 3.9e-11 | -0.10 | 1.00 | 0.00 | FALSE |
31 | GTEx | Brain Cerebellum | RP11-1055B8.4 | 0.25 | 0.27 | lasso | 2 | 0.27 | 1.3e-08 | 10.909 | -10.8 | 3.1e-27 | 0.06 | 0.00 | 1.00 | TRUE |
32 | GTEx | Brain Cerebellum | RP11-1376P16.2 | 0.15 | 0.19 | lasso | 2 | 0.16 | 2.3e-05 | -6.689 | 6.6 | 3.6e-11 | -0.10 | 0.70 | 0.03 | FALSE |
33 | GTEx | Brain Frontal Cortex BA9 | FN3KRP | 0.24 | 0.04 | enet | 28 | 0.10 | 1.4e-03 | 6.983 | -5.2 | 1.6e-07 | 0.01 | 0.10 | 0.05 | TRUE |
34 | GTEx | Brain Hippocampus | FN3KRP | 0.26 | -0.01 | lasso | 2 | -0.01 | 4.6e-01 | 6.922 | -6.5 | 8.4e-11 | 0.00 | 0.06 | 0.06 | FALSE |
35 | GTEx | Brain Hypothalamus | FOXK2 | 0.35 | -0.01 | enet | 7 | 0.04 | 3.4e-02 | 1.005 | 5.9 | 4.0e-09 | -0.02 | 0.07 | 0.11 | FALSE |
36 | GTEx | Breast Mammary Tissue | FN3KRP | 0.54 | 0.26 | lasso | 10 | 0.41 | 1.3e-22 | -4.564 | -6.5 | 7.6e-11 | -0.03 | 0.95 | 0.05 | FALSE |
37 | GTEx | Breast Mammary Tissue | CCDC57 | 0.14 | 0.07 | lasso | 6 | 0.07 | 2.6e-04 | 7.211 | 8.2 | 3.5e-16 | -0.05 | 0.75 | 0.02 | TRUE |
38 | GTEx | Breast Mammary Tissue (Male) | CCDC57 | 0.16 | 0.21 | lasso | 3 | 0.14 | 3.2e-04 | 7.331 | 7.3 | 2.3e-13 | -0.01 | 0.14 | 0.05 | FALSE |
39 | GTEx | Breast Mammary Tissue (Female) | FN3KRP | 0.45 | 0.25 | lasso | 3 | 0.32 | 3.6e-10 | -4.564 | -6.5 | 8.4e-11 | -0.03 | 0.90 | 0.05 | FALSE |
40 | GTEx | Cells EBV-transformed lymphocytes | FN3KRP | 0.26 | 0.14 | lasso | 2 | 0.18 | 1.9e-06 | -4.564 | -5.8 | 5.9e-09 | -0.04 | 0.33 | 0.06 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | FN3KRP | 0.30 | 0.14 | enet | 23 | 0.28 | 7.6e-21 | 7.013 | -7.3 | 2.9e-13 | 0.00 | 0.92 | 0.08 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | LRRC45 | 0.08 | 0.08 | enet | 3 | 0.08 | 2.6e-06 | -11.503 | 11.7 | 8.1e-32 | -0.84 | 0.00 | 1.00 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | STRA13 | 0.19 | 0.23 | lasso | 1 | 0.22 | 4.9e-16 | -10.928 | 10.9 | 8.5e-28 | -0.92 | 0.73 | 0.27 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | DUS1L | 0.05 | 0.00 | enet | 11 | 0.01 | 9.7e-02 | -0.916 | 5.4 | 6.9e-08 | -0.09 | 0.08 | 0.09 | TRUE |
45 | GTEx | Cells Transformed fibroblasts | RP11-1376P16.2 | 0.09 | 0.06 | lasso | 4 | 0.07 | 8.1e-06 | 6.019 | 6.6 | 3.6e-11 | -0.14 | 0.98 | 0.00 | FALSE |
46 | GTEx | Colon Sigmoid | FN3KRP | 0.47 | 0.33 | enet | 22 | 0.35 | 4.5e-13 | 6.922 | -7.2 | 6.2e-13 | -0.01 | 0.93 | 0.07 | FALSE |
47 | GTEx | Colon Sigmoid | STRA13 | 0.36 | 0.26 | enet | 16 | 0.24 | 3.9e-09 | -10.928 | 9.3 | 1.3e-20 | -0.89 | 0.03 | 0.97 | FALSE |
48 | GTEx | Colon Transverse | FN3KRP | 0.48 | 0.36 | enet | 47 | 0.41 | 9.0e-21 | 6.922 | -7.2 | 8.9e-13 | 0.00 | 0.93 | 0.07 | FALSE |
49 | GTEx | Colon Transverse | STRA13 | 0.26 | 0.08 | enet | 18 | 0.05 | 1.6e-03 | -10.928 | 6.9 | 4.5e-12 | -0.74 | 0.28 | 0.59 | FALSE |
50 | GTEx | Colon Transverse | CCDC57 | 0.11 | 0.09 | enet | 8 | 0.08 | 8.2e-05 | 7.050 | 7.5 | 7.4e-14 | -0.04 | 0.64 | 0.02 | FALSE |
51 | GTEx | Esophagus Gastroesophageal Junction | FN3KRP | 0.34 | 0.29 | lasso | 5 | 0.33 | 8.0e-13 | 6.983 | -6.8 | 7.3e-12 | -0.02 | 0.91 | 0.08 | FALSE |
52 | GTEx | Esophagus Gastroesophageal Junction | STRA13 | 0.20 | 0.14 | enet | 4 | 0.16 | 3.1e-06 | -10.598 | 11.3 | 1.6e-29 | -0.91 | 0.06 | 0.91 | FALSE |
53 | GTEx | Esophagus Mucosa | FN3KRP | 0.39 | 0.33 | lasso | 5 | 0.35 | 1.6e-24 | -4.564 | -5.9 | 2.8e-09 | -0.04 | 1.00 | 0.00 | FALSE |
54 | GTEx | Esophagus Mucosa | STRA13 | 0.19 | 0.14 | lasso | 2 | 0.12 | 2.8e-08 | -10.928 | 11.1 | 2.0e-28 | -0.91 | 0.11 | 0.89 | FALSE |
55 | GTEx | Esophagus Mucosa | CCDC57 | 0.13 | 0.10 | lasso | 2 | 0.08 | 2.9e-06 | -6.671 | 7.2 | 4.6e-13 | -0.09 | 0.98 | 0.00 | FALSE |
56 | GTEx | Esophagus Mucosa | RP11-1376P16.2 | 0.06 | 0.04 | lasso | 9 | 0.00 | 1.5e-01 | -6.681 | 6.7 | 2.3e-11 | -0.10 | 0.34 | 0.03 | FALSE |
57 | GTEx | Esophagus Muscularis | FN3KRP | 0.66 | 0.34 | enet | 47 | 0.48 | 5.6e-33 | 7.013 | -7.2 | 5.7e-13 | 0.02 | 0.91 | 0.09 | FALSE |
58 | GTEx | Esophagus Muscularis | STRA13 | 0.40 | 0.33 | lasso | 2 | 0.32 | 4.2e-20 | -10.928 | 10.9 | 9.0e-28 | -0.92 | 0.78 | 0.22 | FALSE |
59 | GTEx | Esophagus Muscularis | CCDC57 | 0.13 | 0.09 | lasso | 2 | 0.06 | 1.1e-04 | 7.331 | 7.3 | 2.4e-13 | -0.01 | 0.87 | 0.01 | FALSE |
60 | GTEx | Heart Atrial Appendage | FN3KRP | 0.30 | 0.17 | lasso | 5 | 0.24 | 3.1e-11 | 4.133 | -6.4 | 1.4e-10 | 0.07 | 0.96 | 0.02 | FALSE |
61 | GTEx | Heart Atrial Appendage | LRRC45 | 0.19 | 0.06 | enet | 9 | 0.12 | 6.7e-06 | -6.167 | 10.5 | 9.7e-26 | -0.70 | 0.02 | 0.98 | FALSE |
62 | GTEx | Heart Atrial Appendage | STRA13 | 0.25 | 0.15 | enet | 4 | 0.16 | 1.2e-07 | -10.598 | 11.8 | 5.5e-32 | -0.95 | 0.01 | 0.99 | FALSE |
63 | GTEx | Heart Atrial Appendage | CCDC57 | 0.20 | 0.14 | enet | 23 | 0.14 | 5.5e-07 | -6.673 | 6.9 | 3.8e-12 | -0.08 | 0.99 | 0.00 | FALSE |
64 | GTEx | Liver | FN3KRP | 0.36 | 0.32 | enet | 8 | 0.23 | 4.1e-07 | 6.922 | -7.1 | 1.1e-12 | -0.03 | 0.81 | 0.08 | FALSE |
65 | GTEx | Lung | FN3KRP | 0.38 | 0.30 | enet | 19 | 0.36 | 5.1e-29 | 6.922 | -6.8 | 1.1e-11 | -0.01 | 0.92 | 0.08 | FALSE |
66 | GTEx | Lung | AZI1 | 0.11 | 0.01 | lasso | 4 | 0.01 | 5.9e-02 | -6.250 | -6.0 | 1.9e-09 | -0.06 | 0.42 | 0.02 | FALSE |
67 | GTEx | Lung | STRA13 | 0.16 | 0.16 | lasso | 3 | 0.15 | 1.2e-11 | -10.928 | 11.2 | 3.3e-29 | -0.95 | 0.05 | 0.95 | FALSE |
68 | GTEx | Lung | CCDC57 | 0.11 | 0.08 | enet | 18 | 0.05 | 8.4e-05 | 5.993 | 6.5 | 8.6e-11 | -0.09 | 1.00 | 0.00 | FALSE |
69 | GTEx | Lung | RP11-1055B8.4 | 0.16 | 0.01 | lasso | 5 | 0.09 | 3.5e-07 | -0.995 | -7.8 | 9.4e-15 | 0.05 | 0.01 | 0.99 | FALSE |
70 | GTEx | Lung | RP11-1376P16.2 | 0.06 | 0.02 | lasso | 5 | 0.02 | 8.4e-03 | 5.535 | 5.2 | 1.9e-07 | -0.07 | 0.24 | 0.03 | FALSE |
71 | GTEx | Muscle Skeletal | STRA13 | 0.20 | 0.09 | lasso | 6 | 0.10 | 5.4e-10 | -10.928 | 11.4 | 6.8e-30 | -0.97 | 0.00 | 1.00 | FALSE |
72 | GTEx | Muscle Skeletal | FASN | 0.04 | 0.05 | enet | 5 | 0.03 | 3.1e-04 | -6.608 | 6.5 | 8.6e-11 | -0.09 | 0.92 | 0.00 | FALSE |
73 | GTEx | Nerve Tibial | FN3KRP | 0.49 | 0.37 | enet | 36 | 0.56 | 3.5e-47 | 6.922 | -7.2 | 7.0e-13 | 0.02 | 0.93 | 0.07 | FALSE |
74 | GTEx | Nerve Tibial | FN3K | 0.18 | 0.10 | enet | 21 | 0.12 | 1.3e-08 | 6.922 | 6.3 | 2.9e-10 | -0.02 | 0.90 | 0.06 | FALSE |
75 | GTEx | Nerve Tibial | STRA13 | 0.18 | 0.17 | enet | 2 | 0.12 | 1.4e-08 | -10.928 | 10.9 | 8.1e-28 | -0.92 | 0.68 | 0.32 | FALSE |
76 | GTEx | Nerve Tibial | CCDC57 | 0.39 | 0.40 | enet | 11 | 0.40 | 2.5e-30 | 7.211 | 7.6 | 2.8e-14 | -0.04 | 1.00 | 0.00 | FALSE |
77 | GTEx | Nerve Tibial | RP11-1055B8.4 | 0.13 | 0.14 | enet | 30 | 0.19 | 1.6e-13 | 10.909 | -9.6 | 9.3e-22 | 0.05 | 0.00 | 1.00 | FALSE |
78 | GTEx | Nerve Tibial | RP11-1376P16.2 | 0.09 | 0.07 | lasso | 4 | 0.07 | 2.0e-05 | 7.211 | 7.6 | 2.1e-14 | -0.03 | 0.51 | 0.02 | FALSE |
79 | GTEx | Ovary | FN3KRP | 0.36 | 0.25 | lasso | 10 | 0.26 | 5.2e-07 | -4.473 | -6.0 | 1.9e-09 | 0.07 | 0.43 | 0.12 | FALSE |
80 | GTEx | Ovary | CCDC57 | 0.39 | 0.30 | enet | 13 | 0.42 | 2.2e-11 | 7.050 | 7.8 | 4.5e-15 | -0.05 | 0.93 | 0.01 | FALSE |
81 | GTEx | Pancreas | FN3KRP | 0.33 | 0.28 | lasso | 5 | 0.26 | 2.3e-11 | 7.013 | -7.2 | 6.3e-13 | -0.01 | 0.91 | 0.08 | FALSE |
82 | GTEx | Pituitary | RFNG | 0.21 | 0.02 | lasso | 5 | 0.05 | 2.4e-02 | -4.269 | -7.3 | 2.3e-13 | 0.17 | 0.06 | 0.07 | FALSE |
83 | GTEx | Prostate | CCDC57 | 0.20 | 0.17 | lasso | 3 | 0.15 | 1.6e-04 | 7.331 | 7.8 | 6.5e-15 | -0.06 | 0.34 | 0.15 | FALSE |
84 | GTEx | Skin Not Sun Exposed Suprapubic | FN3KRP | 0.39 | 0.32 | lasso | 3 | 0.34 | 3.4e-19 | -4.564 | -6.2 | 4.0e-10 | -0.04 | 1.00 | 0.00 | FALSE |
85 | GTEx | Skin Not Sun Exposed Suprapubic | STRA13 | 0.23 | 0.18 | enet | 5 | 0.10 | 6.6e-06 | -10.928 | 10.9 | 8.7e-28 | -0.92 | 0.16 | 0.84 | FALSE |
86 | GTEx | Skin Not Sun Exposed Suprapubic | DCXR | 0.12 | 0.00 | enet | 13 | 0.00 | 2.3e-01 | 0.448 | 6.0 | 1.8e-09 | -0.03 | 0.09 | 0.10 | FALSE |
87 | GTEx | Skin Not Sun Exposed Suprapubic | CCDC57 | 0.11 | 0.05 | enet | 6 | 0.04 | 2.3e-03 | 7.331 | 7.7 | 1.9e-14 | -0.05 | 0.49 | 0.04 | FALSE |
88 | GTEx | Skin Not Sun Exposed Suprapubic | NPLOC4 | 0.15 | 0.07 | enet | 21 | 0.10 | 6.5e-06 | 0.894 | -6.7 | 2.2e-11 | 0.04 | 0.71 | 0.01 | TRUE |
89 | GTEx | Skin Sun Exposed Lower leg | FN3KRP | 0.47 | 0.43 | enet | 37 | 0.46 | 7.8e-42 | -4.564 | -6.6 | 5.6e-11 | -0.02 | 1.00 | 0.00 | FALSE |
90 | GTEx | Skin Sun Exposed Lower leg | STRA13 | 0.12 | 0.13 | lasso | 3 | 0.12 | 7.9e-10 | -10.928 | 10.9 | 1.6e-27 | -0.92 | 0.14 | 0.86 | FALSE |
91 | GTEx | Skin Sun Exposed Lower leg | CCDC57 | 0.18 | 0.15 | lasso | 5 | 0.22 | 3.0e-18 | 7.331 | 7.8 | 7.5e-15 | -0.06 | 1.00 | 0.00 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | RP11-1055B8.4 | 0.21 | 0.10 | lasso | 3 | 0.10 | 7.4e-09 | 10.909 | -10.5 | 1.1e-25 | 0.05 | 0.00 | 1.00 | FALSE |
93 | GTEx | Spleen | FN3KRP | 0.59 | 0.40 | enet | 19 | 0.32 | 4.4e-09 | 6.922 | -7.1 | 1.7e-12 | -0.09 | 0.90 | 0.07 | FALSE |
94 | GTEx | Stomach | FN3KRP | 0.49 | 0.12 | enet | 37 | 0.29 | 1.7e-14 | 6.922 | -6.3 | 4.0e-10 | 0.02 | 0.96 | 0.03 | FALSE |
95 | GTEx | Stomach | CCDC57 | 0.11 | 0.09 | lasso | 3 | 0.10 | 2.0e-05 | 6.019 | 6.7 | 1.8e-11 | -0.08 | 0.80 | 0.01 | FALSE |
96 | GTEx | Testis | FN3KRP | 0.49 | 0.38 | lasso | 3 | 0.42 | 3.4e-20 | -4.564 | -6.3 | 2.1e-10 | -0.03 | 0.98 | 0.02 | FALSE |
97 | GTEx | Thyroid | SLC16A3 | 0.18 | 0.20 | enet | 6 | 0.19 | 1.1e-14 | 7.229 | 7.1 | 1.3e-12 | 0.02 | 1.00 | 0.00 | FALSE |
98 | GTEx | Thyroid | TBCD | 0.20 | 0.04 | lasso | 7 | 0.05 | 7.9e-05 | 4.507 | 5.5 | 4.5e-08 | -0.10 | 0.97 | 0.00 | FALSE |
99 | GTEx | Thyroid | FN3KRP | 0.43 | 0.15 | enet | 24 | 0.43 | 1.8e-35 | 6.922 | -6.7 | 1.6e-11 | 0.04 | 0.93 | 0.07 | FALSE |
100 | GTEx | Thyroid | STRA13 | 0.40 | 0.34 | lasso | 5 | 0.34 | 2.3e-26 | -10.928 | 10.9 | 1.7e-27 | -0.92 | 0.78 | 0.22 | FALSE |
101 | GTEx | Thyroid | ASPSCR1 | 0.23 | 0.15 | enet | 19 | 0.09 | 1.2e-07 | -7.192 | 7.4 | 1.8e-13 | -0.41 | 1.00 | 0.00 | FALSE |
102 | GTEx | Thyroid | DUS1L | 0.07 | 0.05 | lasso | 5 | 0.02 | 7.1e-03 | 6.019 | 8.1 | 6.7e-16 | -0.25 | 0.44 | 0.38 | FALSE |
103 | GTEx | Thyroid | RAC3 | 0.17 | 0.12 | enet | 41 | 0.12 | 1.8e-09 | -7.338 | 7.7 | 1.8e-14 | -0.47 | 1.00 | 0.00 | FALSE |
104 | GTEx | Thyroid | BAIAP2 | 0.20 | 0.03 | lasso | 6 | 0.09 | 3.7e-07 | 2.245 | -5.3 | 1.3e-07 | -0.09 | 0.94 | 0.00 | FALSE |
105 | GTEx | Thyroid | CCDC57 | 0.36 | 0.36 | lasso | 5 | 0.37 | 1.8e-29 | 7.211 | 7.5 | 9.5e-14 | -0.02 | 1.00 | 0.00 | FALSE |
106 | GTEx | Thyroid | RP11-1376P16.2 | 0.13 | 0.10 | enet | 20 | 0.09 | 1.7e-07 | 7.229 | 6.1 | 1.2e-09 | 0.00 | 1.00 | 0.00 | FALSE |
107 | GTEx | Uterus | FN3KRP | 0.34 | 0.26 | lasso | 8 | 0.23 | 1.7e-05 | -6.839 | -6.8 | 7.8e-12 | -0.04 | 0.18 | 0.06 | FALSE |
108 | GTEx | Uterus | CCDC57 | 0.32 | 0.10 | lasso | 6 | 0.09 | 7.7e-03 | 7.229 | 6.4 | 1.3e-10 | -0.05 | 0.08 | 0.38 | FALSE |
109 | GTEx | Vagina | FN3KRP | 0.36 | 0.12 | lasso | 4 | 0.28 | 3.9e-07 | 6.922 | -7.0 | 2.9e-12 | -0.03 | 0.24 | 0.17 | FALSE |
110 | GTEx | Whole Blood | FN3KRP | 0.20 | 0.14 | lasso | 2 | 0.17 | 2.9e-15 | 7.013 | -6.9 | 7.0e-12 | -0.04 | 0.90 | 0.10 | FALSE |
111 | GTEx | Whole Blood | FASN | 0.06 | 0.00 | enet | 30 | 0.01 | 4.0e-02 | 7.211 | -5.7 | 1.0e-08 | 0.01 | 0.24 | 0.04 | FALSE |
112 | NTR | Blood | AATK | 0.06 | 0.06 | lasso | 2 | 0.06 | 1.7e-17 | -6.250 | 6.2 | 5.4e-10 | 0.06 | 1.00 | 0.00 | FALSE |
113 | NTR | Blood | ACTG1 | 0.04 | 0.00 | blup | 260 | 0.02 | 4.2e-06 | -3.532 | 6.9 | 6.1e-12 | 0.01 | 0.06 | 0.05 | FALSE |
114 | NTR | Blood | FN3K | 0.04 | 0.02 | bslmm | 354 | 0.02 | 1.4e-07 | 4.390 | -6.0 | 2.2e-09 | -0.05 | 0.97 | 0.03 | TRUE |
115 | NTR | Blood | FN3KRP | 0.04 | 0.04 | bslmm | 362 | 0.04 | 1.3e-13 | -4.564 | -6.5 | 7.7e-11 | 0.03 | 1.00 | 0.00 | FALSE |
116 | NTR | Blood | RPTOR | 0.04 | 0.00 | blup | 642 | 0.01 | 3.0e-04 | -0.041 | -5.7 | 1.4e-08 | -0.02 | 0.04 | 0.58 | FALSE |
117 | YFS | Blood | AATK | 0.06 | 0.04 | lasso | 1 | 0.03 | 8.6e-11 | -6.250 | 6.2 | 4.1e-10 | 0.06 | 1.00 | 0.00 | TRUE |
118 | YFS | Blood | ASPSCR1 | 0.11 | 0.07 | lasso | 9 | 0.06 | 7.9e-20 | -8.694 | 9.0 | 2.4e-19 | -0.55 | 0.01 | 0.99 | FALSE |
119 | YFS | Blood | CD7 | 0.04 | 0.02 | enet | 24 | 0.03 | 7.9e-09 | 6.175 | -6.7 | 2.6e-11 | -0.16 | 1.00 | 0.00 | TRUE |
120 | YFS | Blood | FASN | 0.08 | 0.09 | lasso | 10 | 0.13 | 4.8e-41 | 7.144 | -7.5 | 8.9e-14 | 0.05 | 1.00 | 0.00 | TRUE |
121 | YFS | Blood | FN3KRP | 0.77 | 0.61 | enet | 49 | 0.75 | 0.0e+00 | -4.564 | -6.8 | 1.3e-11 | -0.01 | 1.00 | 0.00 | FALSE |
122 | YFS | Blood | STRA13 | 0.41 | 0.05 | enet | 56 | 0.16 | 2.2e-48 | -8.948 | 5.5 | 4.1e-08 | -0.53 | 0.00 | 1.00 | TRUE |
123 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | BAIAP2 | 0.09 | 0.04 | blup | 70 | 0.06 | 5.5e-06 | -7.290 | -5.4 | 5.9e-08 | -0.08 | 0.11 | 0.06 | FALSE |
124 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | FN3K | 0.03 | 0.01 | blup | 32 | 0.03 | 3.0e-03 | -4.856 | -6.0 | 2.2e-09 | 0.02 | 0.01 | 0.84 | FALSE |
125 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | FN3KRP | 0.26 | 0.12 | enet | 10 | 0.18 | 6.3e-15 | 7.013 | -6.9 | 6.5e-12 | 0.04 | 0.00 | 1.00 | FALSE |
126 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FN3K | 0.02 | 0.01 | blup | 32 | 0.03 | 3.9e-06 | 6.922 | -5.8 | 5.4e-09 | -0.03 | 0.00 | 0.99 | FALSE |
127 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FN3KRP | 0.46 | 0.23 | enet | 15 | 0.33 | 2.7e-70 | 7.013 | -6.9 | 3.8e-12 | 0.02 | 0.00 | 1.00 | FALSE |
128 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | FN3KRP | 0.25 | 0.05 | blup | 33 | 0.17 | 8.0e-09 | 6.983 | -7.4 | 1.1e-13 | 0.03 | 0.00 | 0.99 | FALSE |
129 | The Cancer Genome Atlas | Colon Adenocarcinoma | FN3K | 0.21 | 0.16 | lasso | 4 | 0.15 | 3.3e-09 | -6.839 | -6.9 | 6.6e-12 | -0.05 | 0.00 | 1.00 | FALSE |
130 | The Cancer Genome Atlas | Colon Adenocarcinoma | FN3KRP | 0.37 | 0.19 | enet | 9 | 0.30 | 1.9e-17 | -6.839 | -6.9 | 5.1e-12 | -0.02 | 0.00 | 1.00 | FALSE |
131 | The Cancer Genome Atlas | Colon Adenocarcinoma | LRRC45 | 0.08 | 0.07 | lasso | 3 | 0.04 | 1.4e-03 | -10.598 | 10.7 | 6.1e-27 | -0.89 | 0.02 | 0.92 | FALSE |
132 | The Cancer Genome Atlas | Glioblastoma Multiforme | FN3KRP | 0.27 | 0.19 | lasso | 4 | 0.18 | 5.3e-06 | 6.983 | -7.1 | 1.2e-12 | -0.01 | 0.00 | 0.99 | FALSE |
133 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CCDC57 | 0.12 | 0.06 | lasso | 2 | 0.05 | 2.6e-06 | 7.331 | -7.2 | 5.9e-13 | -0.01 | 0.01 | 0.99 | FALSE |
134 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | FN3KRP | 0.45 | 0.26 | enet | 12 | 0.30 | 1.5e-33 | -4.564 | -6.8 | 1.1e-11 | -0.01 | 1.00 | 0.00 | TRUE |
135 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | LRRC45 | 0.02 | 0.03 | blup | 36 | 0.02 | 1.5e-03 | -11.506 | 11.3 | 1.1e-29 | -0.73 | 0.01 | 0.88 | FALSE |
136 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PYCR1 | 0.02 | 0.01 | blup | 9 | 0.01 | 1.1e-02 | -7.659 | 8.0 | 1.3e-15 | -0.42 | 0.00 | 0.69 | FALSE |
137 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FN3KRP | 0.67 | 0.28 | lasso | 10 | 0.48 | 1.3e-60 | 6.983 | -7.0 | 2.7e-12 | 0.02 | 0.00 | 1.00 | FALSE |
138 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | STRA13 | 0.05 | 0.04 | blup | 33 | 0.05 | 5.0e-06 | -11.506 | 11.7 | 1.1e-31 | -0.94 | 0.00 | 1.00 | FALSE |
139 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FN3KRP | 0.68 | 0.16 | lasso | 9 | 0.41 | 5.8e-25 | 6.922 | -6.9 | 6.3e-12 | 0.03 | 0.00 | 1.00 | FALSE |
140 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FN3KRP | 0.55 | 0.30 | lasso | 8 | 0.44 | 6.8e-55 | 7.013 | -7.4 | 1.5e-13 | 0.02 | 0.00 | 1.00 | FALSE |
141 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LRRC45 | 0.05 | 0.07 | lasso | 6 | 0.06 | 9.5e-08 | -11.506 | 11.8 | 3.7e-32 | -0.87 | 0.01 | 0.99 | FALSE |
142 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MYADML2 | 0.03 | 0.03 | blup | 10 | 0.03 | 1.1e-04 | -7.920 | -7.4 | 1.1e-13 | 0.42 | 0.02 | 0.89 | FALSE |
143 | The Cancer Genome Atlas | Brain Lower Grade Glioma | NOTUM | 0.06 | 0.02 | enet | 2 | 0.02 | 4.7e-03 | -5.782 | -7.2 | 4.8e-13 | 0.39 | 0.01 | 0.56 | FALSE |
144 | The Cancer Genome Atlas | Brain Lower Grade Glioma | RFNG | 0.06 | 0.04 | lasso | 5 | 0.03 | 1.1e-04 | -6.074 | -6.0 | 1.7e-09 | 0.07 | 0.25 | 0.03 | FALSE |
145 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SLC16A3 | 0.02 | 0.01 | enet | 18 | 0.02 | 2.5e-03 | -6.590 | -5.3 | 1.2e-07 | 0.14 | 0.04 | 0.26 | FALSE |
146 | The Cancer Genome Atlas | Brain Lower Grade Glioma | STRA13 | 0.06 | 0.07 | blup | 33 | 0.07 | 3.3e-08 | -10.928 | 10.7 | 9.2e-27 | -0.85 | 0.01 | 0.99 | FALSE |
147 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | FN3KRP | 0.50 | 0.11 | enet | 13 | 0.27 | 4.4e-13 | 6.922 | -6.7 | 2.6e-11 | 0.06 | 0.00 | 1.00 | FALSE |
148 | The Cancer Genome Atlas | Lung Adenocarcinoma | FN3K | 0.07 | 0.03 | blup | 32 | 0.05 | 1.7e-06 | -6.839 | -7.0 | 2.9e-12 | -0.06 | 0.00 | 1.00 | FALSE |
149 | The Cancer Genome Atlas | Lung Adenocarcinoma | FN3KRP | 0.53 | 0.21 | blup | 33 | 0.35 | 1.9e-42 | 7.013 | -7.3 | 3.3e-13 | 0.01 | 0.00 | 1.00 | FALSE |
150 | The Cancer Genome Atlas | Lung Adenocarcinoma | NPB | 0.03 | 0.01 | enet | 3 | 0.01 | 1.1e-02 | -6.176 | 5.6 | 2.0e-08 | -0.36 | 0.01 | 0.67 | TRUE |
151 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FN3K | 0.04 | 0.01 | blup | 32 | 0.03 | 1.4e-04 | 6.983 | -5.4 | 7.4e-08 | -0.08 | 0.00 | 0.87 | FALSE |
152 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FN3KRP | 0.26 | 0.16 | enet | 13 | 0.16 | 4.0e-18 | -4.564 | -5.5 | 2.9e-08 | -0.03 | 1.00 | 0.00 | FALSE |
153 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | TBCD | 0.07 | 0.00 | blup | 141 | 0.01 | 7.0e-03 | 4.133 | 5.3 | 1.2e-07 | -0.10 | 0.02 | 0.86 | FALSE |
154 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | FN3KRP | 0.17 | 0.08 | blup | 33 | 0.09 | 1.7e-06 | -6.839 | -7.0 | 2.5e-12 | 0.01 | 0.00 | 1.00 | FALSE |
155 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | FN3KRP | 0.52 | 0.26 | enet | 14 | 0.37 | 1.1e-16 | 7.013 | -6.8 | 1.4e-11 | 0.02 | 0.00 | 1.00 | FALSE |
156 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | FN3KRP | 0.87 | 0.40 | lasso | 10 | 0.50 | 1.2e-22 | 7.013 | -7.0 | 2.5e-12 | 0.03 | 0.00 | 1.00 | FALSE |
157 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | LRRC45 | 0.10 | 0.02 | blup | 35 | 0.04 | 8.0e-03 | -8.948 | 10.6 | 1.9e-26 | -0.71 | 0.01 | 0.42 | FALSE |
158 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CCDC57 | 0.21 | 0.02 | blup | 73 | 0.06 | 3.3e-07 | -6.658 | -5.6 | 2.1e-08 | 0.18 | 0.17 | 0.81 | FALSE |
159 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FN3K | 0.11 | 0.11 | lasso | 5 | 0.12 | 1.2e-12 | 7.013 | -6.8 | 9.5e-12 | -0.03 | 0.00 | 1.00 | FALSE |
160 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FN3KRP | 0.78 | 0.46 | enet | 14 | 0.64 | 1.9e-86 | 7.013 | -6.9 | 4.7e-12 | 0.02 | 0.00 | 1.00 | FALSE |
161 | The Cancer Genome Atlas | Prostate Adenocarcinoma | STRA13 | 0.05 | 0.03 | lasso | 3 | 0.02 | 1.8e-03 | -11.506 | 11.5 | 1.2e-30 | -0.82 | 0.00 | 0.96 | FALSE |
162 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TBCD | 0.09 | 0.04 | blup | 143 | 0.03 | 5.7e-04 | -5.481 | -5.3 | 9.3e-08 | -0.10 | 0.33 | 0.30 | FALSE |
163 | The Cancer Genome Atlas | Rectum Adenocarcinoma | FN3KRP | 0.39 | 0.29 | enet | 15 | 0.36 | 2.2e-09 | 7.013 | -6.9 | 4.4e-12 | -0.03 | 0.00 | 0.99 | TRUE |
164 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FN3KRP | 0.37 | 0.14 | enet | 8 | 0.25 | 8.5e-15 | -4.564 | -6.9 | 6.4e-12 | 0.00 | 0.02 | 0.98 | FALSE |
165 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | FN3KRP | 0.67 | 0.26 | enet | 14 | 0.40 | 8.5e-12 | -4.564 | -7.0 | 2.1e-12 | 0.00 | 0.01 | 0.99 | FALSE |
166 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FN3KRP | 0.65 | 0.24 | lasso | 6 | 0.33 | 2.1e-24 | -4.564 | -6.6 | 4.9e-11 | 0.01 | 0.18 | 0.82 | FALSE |
167 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | AATK | 0.29 | 0.15 | lasso | 4 | 0.11 | 1.2e-04 | 6.401 | 6.7 | 2.1e-11 | 0.04 | 0.18 | 0.06 | FALSE |
168 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | CCDC57 | 0.34 | 0.04 | enet | 20 | 0.17 | 1.6e-06 | -1.167 | 5.3 | 1.5e-07 | -0.34 | 0.06 | 0.84 | FALSE |
169 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | FN3KRP | 0.44 | 0.14 | enet | 15 | 0.25 | 2.7e-09 | 7.013 | -7.8 | 6.7e-15 | -0.02 | 0.00 | 1.00 | FALSE |
170 | The Cancer Genome Atlas | Thyroid Carcinoma | BAIAP2 | 0.17 | 0.06 | lasso | 6 | 0.14 | 2.9e-13 | 3.724 | -8.7 | 3.0e-18 | -0.05 | 0.90 | 0.09 | TRUE |
171 | The Cancer Genome Atlas | Thyroid Carcinoma | CCDC57 | 0.08 | 0.02 | blup | 73 | 0.03 | 9.9e-04 | -6.657 | -6.2 | 5.0e-10 | 0.12 | 0.16 | 0.65 | FALSE |
172 | The Cancer Genome Atlas | Thyroid Carcinoma | FN3KRP | 0.75 | 0.37 | lasso | 10 | 0.56 | 7.5e-65 | 7.013 | -7.1 | 1.2e-12 | 0.01 | 0.00 | 1.00 | FALSE |
173 | The Cancer Genome Atlas | Thyroid Carcinoma | SLC16A3 | 0.12 | 0.07 | enet | 11 | 0.08 | 2.2e-08 | 7.211 | 6.1 | 9.2e-10 | 0.03 | 0.00 | 1.00 | TRUE |
174 | The Cancer Genome Atlas | Thyroid Carcinoma | STRA13 | 0.07 | 0.12 | lasso | 6 | 0.10 | 3.2e-10 | -11.599 | 11.9 | 7.5e-33 | -0.99 | 0.00 | 1.00 | TRUE |
175 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | FN3KRP | 0.20 | 0.06 | enet | 8 | 0.09 | 1.9e-03 | -6.839 | -6.6 | 5.4e-11 | 0.01 | 0.00 | 0.92 | FALSE |