Best TWAS P=5.85e-23 · Best GWAS P=1.14e-21 conditioned to 0.0974
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | DOC2A | 0.08 | 0.01 | bslmm | 213 | 0.05 | 2.4e-06 | -2.0 | -5.2 | 1.5e-07 | -0.58 | 0.26 | 0.71 | FALSE |
2 | GTEx | Adipose Subcutaneous | YPEL3 | 0.20 | 0.29 | lasso | 9 | 0.30 | 3.8e-25 | 7.9 | 8.4 | 4.2e-17 | 0.86 | 0.96 | 0.04 | FALSE |
3 | GTEx | Adipose Subcutaneous | RP11-231C14.4 | 0.06 | 0.07 | enet | 5 | 0.07 | 4.7e-06 | -6.3 | 6.8 | 1.4e-11 | 0.69 | 0.20 | 0.77 | FALSE |
4 | GTEx | Adipose Subcutaneous | INO80E | 0.10 | 0.16 | enet | 19 | 0.15 | 4.5e-12 | 8.7 | -7.8 | 5.5e-15 | -0.84 | 0.54 | 0.46 | FALSE |
5 | GTEx | Adipose Subcutaneous | TUFM | 0.12 | 0.09 | enet | 10 | 0.10 | 1.5e-08 | 4.7 | 5.1 | 2.7e-07 | 0.05 | 0.04 | 0.94 | FALSE |
6 | GTEx | Adipose Visceral Omentum | YPEL3 | 0.13 | 0.16 | lasso | 4 | 0.14 | 6.8e-08 | 7.9 | 8.6 | 5.6e-18 | 0.86 | 0.10 | 0.90 | FALSE |
7 | GTEx | Adipose Visceral Omentum | RP11-231C14.4 | 0.07 | 0.01 | enet | 18 | 0.03 | 1.2e-02 | -6.2 | 7.6 | 3.3e-14 | 0.66 | 0.03 | 0.85 | FALSE |
8 | GTEx | Adipose Visceral Omentum | INO80E | 0.14 | 0.14 | enet | 17 | 0.19 | 3.7e-10 | 8.9 | -8.3 | 1.1e-16 | -0.79 | 0.57 | 0.43 | FALSE |
9 | GTEx | Adipose Visceral Omentum | SEZ6L2 | 0.05 | 0.01 | enet | 10 | 0.01 | 9.4e-02 | -6.6 | 6.5 | 6.9e-11 | 0.69 | 0.08 | 0.50 | FALSE |
10 | GTEx | Adipose Visceral Omentum | AC009133.12 | 0.05 | 0.01 | lasso | 2 | 0.00 | 2.3e-01 | 8.8 | 8.3 | 7.6e-17 | 0.76 | 0.06 | 0.35 | FALSE |
11 | GTEx | Artery Aorta | YPEL3 | 0.27 | 0.25 | lasso | 9 | 0.26 | 9.1e-15 | 7.9 | 7.9 | 2.1e-15 | 0.79 | 0.99 | 0.01 | FALSE |
12 | GTEx | Artery Aorta | CDIPT | 0.09 | 0.04 | lasso | 3 | 0.02 | 3.6e-02 | 5.6 | 5.8 | 5.2e-09 | 0.45 | 0.06 | 0.29 | FALSE |
13 | GTEx | Artery Aorta | TBX6 | 0.14 | 0.02 | lasso | 7 | 0.03 | 1.2e-02 | 8.3 | 8.0 | 1.7e-15 | 0.75 | 0.18 | 0.58 | FALSE |
14 | GTEx | Artery Aorta | INO80E | 0.12 | 0.17 | enet | 11 | 0.17 | 1.9e-09 | -7.3 | -8.5 | 2.4e-17 | -0.83 | 0.24 | 0.76 | FALSE |
15 | GTEx | Artery Aorta | TUFM | 0.12 | 0.12 | enet | 8 | 0.17 | 1.1e-09 | 4.8 | 5.2 | 2.6e-07 | 0.07 | 0.04 | 0.96 | FALSE |
16 | GTEx | Artery Aorta | SLX1A-SULT1A3 | 0.07 | 0.00 | enet | 17 | 0.00 | 2.6e-01 | 2.1 | 6.6 | 3.1e-11 | 0.70 | 0.08 | 0.39 | FALSE |
17 | GTEx | Artery Coronary | TBX6 | 0.22 | 0.00 | enet | 17 | 0.02 | 6.7e-02 | -6.2 | 6.8 | 1.2e-11 | 0.74 | 0.07 | 0.29 | FALSE |
18 | GTEx | Artery Tibial | YPEL3 | 0.19 | 0.29 | lasso | 5 | 0.27 | 1.5e-21 | 7.9 | 8.1 | 5.9e-16 | 0.80 | 1.00 | 0.00 | FALSE |
19 | GTEx | Artery Tibial | GDPD3 | 0.08 | 0.05 | enet | 5 | 0.05 | 1.5e-04 | -5.5 | -5.3 | 1.1e-07 | -0.32 | 0.67 | 0.09 | FALSE |
20 | GTEx | Artery Tibial | TBX6 | 0.21 | 0.13 | lasso | 4 | 0.18 | 3.5e-14 | 8.3 | 6.5 | 1.2e-10 | 0.74 | 0.50 | 0.50 | FALSE |
21 | GTEx | Artery Tibial | RP11-231C14.4 | 0.04 | 0.04 | enet | 4 | 0.02 | 9.2e-03 | -6.6 | 6.7 | 2.8e-11 | 0.71 | 0.05 | 0.77 | FALSE |
22 | GTEx | Artery Tibial | INO80E | 0.23 | 0.15 | enet | 21 | 0.19 | 6.7e-15 | 8.7 | -7.5 | 7.6e-14 | -0.86 | 0.05 | 0.95 | FALSE |
23 | GTEx | Artery Tibial | KCTD13 | 0.06 | 0.01 | lasso | 2 | 0.02 | 8.0e-03 | -4.4 | 7.6 | 2.5e-14 | 0.46 | 0.06 | 0.50 | FALSE |
24 | GTEx | Artery Tibial | CTD-2574D22.4 | 0.05 | 0.02 | enet | 9 | 0.03 | 1.2e-03 | -6.0 | -7.2 | 4.1e-13 | -0.54 | 0.18 | 0.40 | FALSE |
25 | GTEx | Brain Cerebellar Hemisphere | YPEL3 | 0.15 | 0.13 | lasso | 6 | 0.11 | 8.1e-04 | 8.5 | 8.8 | 2.1e-18 | 0.86 | 0.06 | 0.82 | FALSE |
26 | GTEx | Brain Cerebellum | YPEL3 | 0.16 | 0.17 | lasso | 2 | 0.16 | 1.7e-05 | 7.9 | 7.9 | 2.1e-15 | 0.78 | 0.14 | 0.65 | FALSE |
27 | GTEx | Brain Cerebellum | INO80E | 0.23 | 0.10 | enet | 8 | 0.14 | 5.7e-05 | -7.3 | -7.5 | 8.6e-14 | -0.71 | 0.19 | 0.69 | FALSE |
28 | GTEx | Brain Putamen basal ganglia | LAT | 0.15 | 0.04 | lasso | 4 | 0.08 | 6.7e-03 | 4.6 | 5.4 | 6.1e-08 | 0.08 | 0.03 | 0.69 | FALSE |
29 | GTEx | Breast Mammary Tissue | MVP | 0.18 | 0.08 | enet | 13 | 0.06 | 6.0e-04 | 3.9 | 5.8 | 8.4e-09 | 0.43 | 0.22 | 0.27 | FALSE |
30 | GTEx | Breast Mammary Tissue | YPEL3 | 0.16 | 0.25 | lasso | 2 | 0.24 | 1.3e-12 | 7.9 | 7.9 | 3.2e-15 | 0.78 | 0.77 | 0.23 | FALSE |
31 | GTEx | Breast Mammary Tissue | INO80E | 0.17 | 0.12 | enet | 14 | 0.13 | 2.3e-07 | -7.3 | -7.5 | 7.1e-14 | -0.80 | 0.42 | 0.57 | FALSE |
32 | GTEx | Breast Mammary Tissue | RP11-1348G14.4 | 0.13 | 0.17 | lasso | 6 | 0.16 | 2.3e-08 | 4.8 | -5.1 | 2.8e-07 | -0.07 | 0.04 | 0.96 | FALSE |
33 | GTEx | Breast Mammary Tissue (Male) | YPEL3 | 0.30 | 0.16 | lasso | 3 | 0.18 | 6.2e-05 | 8.1 | 8.5 | 2.7e-17 | 0.85 | 0.07 | 0.86 | FALSE |
34 | GTEx | Breast Mammary Tissue (Male) | RP11-1348G14.4 | 0.17 | 0.08 | enet | 31 | 0.07 | 9.4e-03 | 4.7 | -5.5 | 5.1e-08 | -0.06 | 0.04 | 0.80 | FALSE |
35 | GTEx | Breast Mammary Tissue (Female) | YPEL3 | 0.12 | 0.20 | lasso | 2 | 0.16 | 1.5e-05 | 7.9 | 7.9 | 2.2e-15 | 0.78 | 0.14 | 0.46 | FALSE |
36 | GTEx | Breast Mammary Tissue (Female) | INO80E | 0.20 | 0.13 | lasso | 7 | 0.06 | 7.3e-03 | -7.3 | -6.9 | 5.8e-12 | -0.67 | 0.05 | 0.60 | FALSE |
37 | GTEx | Cells EBV-transformed lymphocytes | MAPK3 | 0.23 | 0.12 | enet | 8 | 0.08 | 1.5e-03 | -6.2 | -5.4 | 6.6e-08 | -0.71 | 0.53 | 0.35 | FALSE |
38 | GTEx | Cells EBV-transformed lymphocytes | TBX6 | 0.19 | 0.17 | lasso | 4 | 0.17 | 4.1e-06 | -5.8 | 6.7 | 2.9e-11 | 0.71 | 0.17 | 0.74 | FALSE |
39 | GTEx | Cells Transformed fibroblasts | YPEL3 | 0.09 | 0.09 | enet | 2 | 0.09 | 3.2e-07 | 7.9 | 7.9 | 2.2e-15 | 0.77 | 0.82 | 0.17 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | MAPK3 | 0.12 | 0.05 | lasso | 10 | 0.04 | 3.7e-04 | -6.2 | -6.4 | 1.7e-10 | -0.76 | 0.21 | 0.77 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | TBX6 | 0.06 | 0.04 | enet | 21 | 0.05 | 9.3e-05 | 8.3 | 7.1 | 1.0e-12 | 0.71 | 0.13 | 0.78 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | PPP4C | 0.04 | 0.06 | lasso | 1 | 0.05 | 8.0e-05 | 8.7 | -8.8 | 2.2e-18 | -0.87 | 0.07 | 0.90 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | TMEM219 | 0.10 | 0.05 | enet | 28 | 0.06 | 1.6e-05 | 8.7 | -6.9 | 5.7e-12 | -0.84 | 0.08 | 0.92 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | RP11-231C14.4 | 0.04 | 0.01 | enet | 11 | 0.01 | 6.1e-02 | 1.7 | 5.6 | 2.2e-08 | 0.50 | 0.03 | 0.45 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | INO80E | 0.04 | 0.03 | enet | 5 | 0.06 | 5.5e-05 | 8.7 | -8.0 | 1.2e-15 | -0.77 | 0.14 | 0.76 | FALSE |
46 | GTEx | Cells Transformed fibroblasts | RP11-455F5.3 | 0.05 | 0.07 | lasso | 2 | 0.06 | 1.7e-05 | 7.9 | 7.9 | 2.3e-15 | 0.77 | 0.39 | 0.37 | FALSE |
47 | GTEx | Colon Sigmoid | YPEL3 | 0.22 | 0.08 | lasso | 7 | 0.07 | 1.4e-03 | -5.8 | 6.3 | 2.7e-10 | 0.50 | 0.09 | 0.23 | FALSE |
48 | GTEx | Colon Transverse | YPEL3 | 0.27 | 0.26 | lasso | 4 | 0.25 | 2.7e-12 | 7.9 | 8.0 | 1.4e-15 | 0.78 | 0.94 | 0.06 | FALSE |
49 | GTEx | Colon Transverse | RP11-231C14.4 | 0.07 | 0.04 | enet | 8 | 0.06 | 8.0e-04 | 8.8 | 8.7 | 2.6e-18 | 0.81 | 0.02 | 0.93 | FALSE |
50 | GTEx | Colon Transverse | INO80E | 0.14 | 0.17 | enet | 16 | 0.19 | 3.3e-09 | -7.3 | -8.4 | 3.5e-17 | -0.85 | 0.28 | 0.72 | FALSE |
51 | GTEx | Colon Transverse | RP11-347C12.1 | 0.15 | 0.06 | enet | 11 | 0.11 | 9.4e-06 | -2.5 | 5.3 | 1.4e-07 | 0.56 | 0.31 | 0.29 | FALSE |
52 | GTEx | Esophagus Gastroesophageal Junction | INO80E | 0.15 | 0.00 | lasso | 6 | 0.02 | 4.3e-02 | 8.8 | -6.7 | 2.0e-11 | -0.83 | 0.03 | 0.86 | FALSE |
53 | GTEx | Esophagus Mucosa | YPEL3 | 0.11 | 0.21 | lasso | 3 | 0.20 | 8.8e-14 | 7.9 | 8.1 | 7.3e-16 | 0.78 | 0.81 | 0.19 | FALSE |
54 | GTEx | Esophagus Mucosa | TBX6 | 0.21 | 0.07 | lasso | 6 | 0.05 | 1.9e-04 | 5.6 | 5.9 | 4.3e-09 | 0.40 | 0.74 | 0.02 | FALSE |
55 | GTEx | Esophagus Mucosa | RP11-231C14.4 | 0.07 | 0.00 | enet | 11 | 0.00 | 4.9e-01 | 8.7 | 6.6 | 5.0e-11 | 0.75 | 0.03 | 0.67 | FALSE |
56 | GTEx | Esophagus Mucosa | CD2BP2 | 0.14 | 0.03 | enet | 13 | 0.04 | 1.0e-03 | 4.7 | -5.7 | 1.1e-08 | -0.07 | 0.36 | 0.03 | TRUE |
57 | GTEx | Esophagus Mucosa | INO80E | 0.12 | 0.16 | enet | 14 | 0.20 | 4.6e-13 | -7.3 | -8.4 | 2.8e-17 | -0.88 | 0.23 | 0.77 | FALSE |
58 | GTEx | Esophagus Mucosa | TUFM | 0.12 | 0.05 | lasso | 5 | 0.04 | 6.8e-04 | 4.7 | 5.2 | 2.5e-07 | 0.04 | 0.04 | 0.88 | FALSE |
59 | GTEx | Esophagus Muscularis | YPEL3 | 0.24 | 0.29 | lasso | 5 | 0.27 | 1.1e-16 | 8.3 | 8.3 | 7.6e-17 | 0.80 | 1.00 | 0.00 | FALSE |
60 | GTEx | Esophagus Muscularis | CDIPT | 0.06 | 0.04 | lasso | 4 | 0.05 | 8.8e-04 | -4.3 | 6.3 | 3.6e-10 | 0.66 | 0.28 | 0.11 | FALSE |
61 | GTEx | Esophagus Muscularis | TBX6 | 0.18 | 0.14 | enet | 13 | 0.22 | 1.3e-13 | -4.3 | 5.7 | 1.4e-08 | 0.65 | 0.70 | 0.30 | FALSE |
62 | GTEx | Esophagus Muscularis | INO80E | 0.10 | 0.11 | enet | 20 | 0.07 | 4.6e-05 | 8.9 | -8.0 | 1.9e-15 | -0.87 | 0.07 | 0.93 | FALSE |
63 | GTEx | Esophagus Muscularis | RP11-1348G14.4 | 0.16 | 0.17 | enet | 18 | 0.17 | 2.0e-10 | 4.8 | -5.2 | 2.4e-07 | -0.07 | 0.04 | 0.95 | FALSE |
64 | GTEx | Heart Atrial Appendage | INO80E | 0.14 | 0.17 | lasso | 3 | 0.19 | 5.7e-09 | 8.9 | -8.7 | 4.0e-18 | -0.84 | 0.18 | 0.81 | FALSE |
65 | GTEx | Heart Atrial Appendage | RP11-347C12.1 | 0.07 | 0.04 | lasso | 3 | 0.02 | 3.1e-02 | -4.4 | 5.5 | 3.5e-08 | 0.77 | 0.03 | 0.80 | FALSE |
66 | GTEx | Heart Left Ventricle | YPEL3 | 0.12 | 0.02 | lasso | 7 | 0.02 | 4.7e-02 | 8.5 | 8.1 | 5.3e-16 | 0.74 | 0.07 | 0.60 | FALSE |
67 | GTEx | Heart Left Ventricle | TBX6 | 0.16 | 0.14 | enet | 10 | 0.12 | 7.8e-07 | -4.3 | 5.8 | 8.8e-09 | 0.63 | 0.34 | 0.60 | FALSE |
68 | GTEx | Heart Left Ventricle | INO80E | 0.06 | 0.07 | lasso | 7 | 0.08 | 6.1e-05 | 8.8 | -8.6 | 7.4e-18 | -0.89 | 0.04 | 0.93 | FALSE |
69 | GTEx | Lung | YPEL3 | 0.10 | 0.16 | lasso | 4 | 0.16 | 3.2e-12 | 7.9 | 8.6 | 1.1e-17 | 0.85 | 0.81 | 0.19 | FALSE |
70 | GTEx | Lung | INO80E | 0.18 | 0.17 | lasso | 8 | 0.19 | 1.0e-14 | -7.3 | -8.2 | 2.3e-16 | -0.80 | 0.81 | 0.19 | FALSE |
71 | GTEx | Lung | RP11-347C12.2 | 0.04 | 0.03 | enet | 11 | 0.04 | 8.8e-04 | -3.9 | 5.9 | 3.8e-09 | 0.72 | 0.11 | 0.75 | FALSE |
72 | GTEx | Muscle Skeletal | TBX6 | 0.09 | 0.09 | lasso | 8 | 0.09 | 8.6e-09 | 7.9 | 7.9 | 2.8e-15 | 0.81 | 0.72 | 0.28 | FALSE |
73 | GTEx | Muscle Skeletal | AC009133.12 | 0.04 | 0.00 | lasso | 4 | 0.00 | 5.3e-01 | 4.0 | 5.1 | 2.9e-07 | 0.39 | 0.04 | 0.07 | FALSE |
74 | GTEx | Nerve Tibial | YPEL3 | 0.23 | 0.33 | lasso | 5 | 0.34 | 1.1e-24 | 7.9 | 8.1 | 6.8e-16 | 0.81 | 0.94 | 0.06 | FALSE |
75 | GTEx | Nerve Tibial | TBX6 | 0.20 | 0.24 | lasso | 7 | 0.24 | 1.2e-16 | 9.5 | 8.8 | 9.9e-19 | 0.95 | 0.02 | 0.98 | FALSE |
76 | GTEx | Nerve Tibial | INO80E | 0.26 | 0.34 | enet | 30 | 0.38 | 3.5e-28 | 8.8 | -8.2 | 3.4e-16 | -0.84 | 0.75 | 0.25 | FALSE |
77 | GTEx | Nerve Tibial | SH2B1 | 0.06 | 0.03 | lasso | 9 | 0.03 | 6.3e-03 | 4.8 | -5.2 | 2.4e-07 | -0.07 | 0.05 | 0.88 | FALSE |
78 | GTEx | Ovary | RP11-231C14.4 | 0.22 | 0.12 | lasso | 5 | 0.11 | 1.1e-03 | -6.3 | 5.5 | 3.0e-08 | 0.71 | 0.02 | 0.75 | FALSE |
79 | GTEx | Ovary | INO80E | 0.16 | 0.06 | lasso | 14 | 0.13 | 5.1e-04 | 8.8 | -8.6 | 9.7e-18 | -0.73 | 0.08 | 0.69 | FALSE |
80 | GTEx | Ovary | TUFM | 0.37 | 0.32 | lasso | 7 | 0.31 | 2.0e-08 | 4.8 | 5.3 | 9.9e-08 | 0.05 | 0.03 | 0.96 | FALSE |
81 | GTEx | Pancreas | YPEL3 | 0.19 | 0.14 | lasso | 6 | 0.18 | 5.7e-08 | 7.9 | 8.1 | 6.3e-16 | 0.70 | 0.49 | 0.44 | FALSE |
82 | GTEx | Pituitary | YPEL3 | 0.12 | 0.04 | lasso | 4 | 0.05 | 2.5e-02 | 8.3 | 7.8 | 7.3e-15 | 0.89 | 0.03 | 0.79 | FALSE |
83 | GTEx | Pituitary | INO80E | 0.27 | 0.29 | lasso | 8 | 0.27 | 1.9e-07 | 8.8 | -8.9 | 6.0e-19 | -0.87 | 0.07 | 0.92 | FALSE |
84 | GTEx | Prostate | INO80E | 0.18 | 0.23 | lasso | 2 | 0.23 | 1.6e-06 | 8.8 | -8.8 | 1.8e-18 | -0.85 | 0.05 | 0.93 | FALSE |
85 | GTEx | Skin Not Sun Exposed Suprapubic | YPEL3 | 0.22 | 0.27 | lasso | 6 | 0.25 | 8.1e-14 | 7.9 | 8.1 | 3.9e-16 | 0.78 | 1.00 | 0.00 | FALSE |
86 | GTEx | Skin Not Sun Exposed Suprapubic | CORO1A | 0.06 | 0.02 | lasso | 4 | 0.00 | 2.0e-01 | -4.1 | -6.0 | 2.5e-09 | -0.78 | 0.04 | 0.82 | FALSE |
87 | GTEx | Skin Not Sun Exposed Suprapubic | RP11-231C14.4 | 0.07 | 0.01 | enet | 11 | 0.03 | 1.1e-02 | 1.5 | 6.1 | 1.1e-09 | 0.49 | 0.05 | 0.52 | FALSE |
88 | GTEx | Skin Not Sun Exposed Suprapubic | INO80E | 0.23 | 0.20 | enet | 34 | 0.14 | 2.9e-08 | -7.3 | -8.2 | 2.2e-16 | -0.62 | 0.94 | 0.06 | FALSE |
89 | GTEx | Skin Sun Exposed Lower leg | YPEL3 | 0.20 | 0.26 | lasso | 4 | 0.27 | 2.2e-22 | 7.9 | 8.0 | 1.2e-15 | 0.78 | 1.00 | 0.00 | FALSE |
90 | GTEx | Skin Sun Exposed Lower leg | RP11-231C14.4 | 0.06 | 0.05 | enet | 17 | 0.03 | 9.6e-04 | 8.8 | 7.8 | 9.0e-15 | 0.75 | 0.04 | 0.94 | FALSE |
91 | GTEx | Skin Sun Exposed Lower leg | INO80E | 0.11 | 0.10 | lasso | 5 | 0.10 | 1.4e-08 | 8.7 | -8.6 | 9.1e-18 | -0.82 | 0.39 | 0.61 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | RP11-455F5.3 | 0.06 | 0.05 | lasso | 6 | 0.05 | 9.6e-05 | -5.8 | 7.2 | 4.1e-13 | 0.73 | 0.12 | 0.86 | FALSE |
93 | GTEx | Skin Sun Exposed Lower leg | RP11-1348G14.4 | 0.18 | 0.15 | lasso | 9 | 0.18 | 4.5e-15 | 4.7 | -5.3 | 1.1e-07 | -0.06 | 0.03 | 0.96 | FALSE |
94 | GTEx | Small Intestine Terminal Ileum | MAPK3 | 0.17 | 0.01 | lasso | 5 | 0.04 | 5.4e-02 | 8.8 | -7.6 | 2.1e-14 | -0.73 | 0.07 | 0.36 | FALSE |
95 | GTEx | Small Intestine Terminal Ileum | INO80E | 0.20 | 0.14 | lasso | 17 | 0.08 | 6.2e-03 | 9.5 | -9.0 | 2.8e-19 | -0.94 | 0.04 | 0.88 | FALSE |
96 | GTEx | Spleen | YPEL3 | 0.18 | 0.24 | enet | 5 | 0.18 | 2.3e-05 | 8.3 | 8.3 | 1.3e-16 | 0.81 | 0.42 | 0.15 | FALSE |
97 | GTEx | Spleen | INO80E | 0.23 | 0.20 | enet | 13 | 0.26 | 2.6e-07 | -7.8 | -7.4 | 1.1e-13 | -0.80 | 0.15 | 0.82 | FALSE |
98 | GTEx | Stomach | YPEL3 | 0.12 | 0.09 | lasso | 1 | 0.07 | 2.2e-04 | 8.3 | 8.2 | 1.5e-16 | 0.79 | 0.46 | 0.31 | FALSE |
99 | GTEx | Stomach | RP11-231C14.4 | 0.09 | 0.09 | enet | 7 | 0.05 | 1.5e-03 | -6.7 | 6.7 | 1.8e-11 | 0.72 | 0.09 | 0.44 | FALSE |
100 | GTEx | Stomach | INO80E | 0.09 | 0.07 | enet | 6 | 0.02 | 3.4e-02 | -7.3 | -7.4 | 1.3e-13 | -0.72 | 0.15 | 0.55 | FALSE |
101 | GTEx | Testis | YPEL3 | 0.15 | 0.11 | lasso | 2 | 0.11 | 1.5e-05 | 8.3 | 7.6 | 2.1e-14 | 0.75 | 0.49 | 0.35 | FALSE |
102 | GTEx | Testis | INO80E | 0.15 | 0.20 | lasso | 3 | 0.19 | 8.3e-09 | 8.7 | -8.8 | 1.8e-18 | -0.87 | 0.12 | 0.88 | FALSE |
103 | GTEx | Thyroid | YPEL3 | 0.07 | 0.11 | lasso | 4 | 0.10 | 2.6e-08 | 8.3 | 8.2 | 3.2e-16 | 0.80 | 0.56 | 0.44 | FALSE |
104 | GTEx | Thyroid | RP11-231C14.4 | 0.06 | 0.00 | lasso | 3 | 0.02 | 1.9e-02 | -6.3 | 5.7 | 1.2e-08 | 0.67 | 0.04 | 0.41 | FALSE |
105 | GTEx | Thyroid | INO80E | 0.15 | 0.25 | lasso | 3 | 0.25 | 2.0e-19 | -7.3 | -7.9 | 2.0e-15 | -0.76 | 0.96 | 0.04 | FALSE |
106 | GTEx | Thyroid | RP11-1348G14.4 | 0.15 | 0.08 | enet | 11 | 0.12 | 1.5e-09 | 5.0 | -5.8 | 8.7e-09 | -0.05 | 0.02 | 0.97 | TRUE |
107 | GTEx | Uterus | TBX6 | 0.29 | 0.04 | lasso | 6 | 0.10 | 4.5e-03 | 8.1 | 9.9 | 5.8e-23 | 0.77 | 0.03 | 0.68 | TRUE |
108 | GTEx | Vagina | YPEL3 | 0.12 | 0.08 | lasso | 2 | 0.06 | 2.1e-02 | 7.9 | 7.9 | 2.6e-15 | 0.78 | 0.05 | 0.57 | FALSE |
109 | GTEx | Vagina | INO80E | 0.24 | 0.23 | lasso | 6 | 0.27 | 7.0e-07 | -7.8 | -8.2 | 2.1e-16 | -0.77 | 0.08 | 0.90 | FALSE |
110 | GTEx | Whole Blood | YPEL3 | 0.09 | 0.06 | lasso | 3 | 0.06 | 5.8e-06 | 7.9 | 7.8 | 6.0e-15 | 0.78 | 0.71 | 0.23 | FALSE |
111 | GTEx | Whole Blood | MAPK3 | 0.09 | 0.05 | enet | 30 | 0.09 | 7.8e-09 | -6.3 | -5.4 | 7.5e-08 | -0.66 | 0.33 | 0.66 | FALSE |
112 | GTEx | Whole Blood | GDPD3 | 0.23 | 0.01 | enet | 40 | 0.10 | 3.2e-09 | -5.3 | -5.2 | 2.2e-07 | -0.40 | 0.09 | 0.85 | FALSE |
113 | METSIM | Adipose | PPP4C | 0.02 | 0.00 | bslmm | 222 | 0.00 | 1.1e-01 | -4.1 | -6.3 | 2.6e-10 | -0.74 | 0.07 | 0.53 | FALSE |
114 | METSIM | Adipose | TBX6 | 0.16 | 0.02 | bslmm | 221 | 0.07 | 4.6e-11 | -6.0 | 5.5 | 2.9e-08 | 0.54 | 0.32 | 0.68 | FALSE |
115 | METSIM | Adipose | YPEL3 | 0.16 | 0.21 | enet | 12 | 0.22 | 9.5e-33 | 8.3 | 9.2 | 4.0e-20 | 0.87 | 1.00 | 0.00 | FALSE |
116 | ROSMAP | Brain Pre-frontal Cortex | YPEL3 | 0.06 | 0.03 | blup | 209 | 0.04 | 1.9e-05 | 8.4 | 9.2 | 3.4e-20 | 0.71 | 0.12 | 0.88 | FALSE |
117 | ROSMAP | Brain Pre-frontal Cortex | TBX6 | 0.21 | 0.06 | enet | 29 | 0.14 | 9.3e-18 | 8.3 | 5.8 | 5.7e-09 | 0.54 | 0.95 | 0.05 | TRUE |
118 | ROSMAP | Brain Pre-frontal Cortex | PPP4C | 0.15 | 0.30 | lasso | 4 | 0.31 | 3.1e-40 | 8.3 | -8.4 | 3.8e-17 | -0.81 | 0.99 | 0.01 | FALSE |
119 | ROSMAP | Brain Pre-frontal Cortex | DOC2A | 0.03 | 0.00 | blup | 199 | 0.01 | 1.8e-02 | 8.8 | -8.7 | 3.9e-18 | -0.86 | 0.03 | 0.76 | FALSE |
120 | ROSMAP | Brain Pre-frontal Cortex | TAOK2 | 0.04 | 0.02 | blup | 188 | 0.03 | 1.7e-04 | -6.6 | -7.2 | 7.8e-13 | -0.73 | 0.46 | 0.40 | FALSE |
121 | ROSMAP | Brain Pre-frontal Cortex | INO80E | 0.08 | 0.13 | lasso | 2 | 0.12 | 1.6e-15 | 8.8 | -8.8 | 2.1e-18 | -0.87 | 0.86 | 0.14 | FALSE |
122 | ROSMAP | Brain Pre-frontal Cortex | ASPHD1 | 0.03 | 0.03 | lasso | 4 | 0.02 | 5.0e-04 | -6.2 | 6.8 | 1.3e-11 | 0.72 | 0.35 | 0.40 | FALSE |
123 | ROSMAP | Brain Pre-frontal Cortex | NUPR1 | 0.05 | 0.04 | bslmm | 200 | 0.02 | 3.1e-04 | 3.9 | 5.3 | 1.0e-07 | 0.09 | 0.06 | 0.91 | FALSE |
124 | ROSMAP | Brain Pre-frontal Cortex | RP11-345J4.8 | 0.02 | 0.00 | blup | 192 | 0.01 | 1.9e-02 | 1.8 | 8.5 | 1.7e-17 | 0.68 | 0.03 | 0.15 | FALSE |
125 | ROSMAP | Brain Pre-frontal Cortex | CDIPT-AS1 | 0.17 | 0.18 | lasso | 2 | 0.18 | 1.8e-22 | 5.6 | -5.7 | 1.6e-08 | -0.39 | 1.00 | 0.00 | FALSE |
126 | YFS | Blood | INO80E | 0.02 | 0.02 | lasso | 5 | 0.02 | 3.7e-07 | 9.6 | -9.5 | 2.3e-21 | -0.99 | 0.01 | 0.99 | FALSE |
127 | YFS | Blood | PPP4C | 0.03 | 0.05 | lasso | 4 | 0.05 | 4.0e-15 | 7.9 | -9.0 | 2.0e-19 | -0.91 | 0.05 | 0.95 | FALSE |
128 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | LOC440356 | 0.03 | 0.03 | blup | 33 | 0.03 | 1.1e-03 | 3.2 | -5.3 | 9.7e-08 | -0.37 | 0.12 | 0.18 | FALSE |
129 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ALDOA | 0.02 | 0.01 | enet | 9 | 0.02 | 9.2e-05 | 9.5 | 7.8 | 5.9e-15 | 0.91 | 0.01 | 0.98 | FALSE |
130 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FAM57B | 0.04 | 0.01 | blup | 46 | 0.03 | 2.6e-07 | 8.7 | 7.0 | 3.6e-12 | 0.79 | 0.02 | 0.97 | FALSE |
131 | The Cancer Genome Atlas | Breast Invasive Carcinoma | LOC440356 | 0.08 | 0.05 | lasso | 4 | 0.06 | 2.0e-11 | 5.6 | -5.7 | 1.0e-08 | -0.41 | 0.27 | 0.73 | FALSE |
132 | The Cancer Genome Atlas | Colon Adenocarcinoma | DOC2A | 0.30 | 0.00 | enet | 7 | 0.05 | 5.8e-04 | 9.5 | -7.2 | 6.2e-13 | -0.67 | 0.01 | 0.73 | FALSE |
133 | The Cancer Genome Atlas | Esophageal Carcinoma | PPP4C | 0.08 | 0.04 | blup | 23 | 0.05 | 8.9e-03 | 8.5 | -9.2 | 4.6e-20 | -0.90 | 0.01 | 0.79 | FALSE |
134 | The Cancer Genome Atlas | Glioblastoma Multiforme | TBX6 | 0.16 | 0.11 | enet | 7 | 0.16 | 1.1e-05 | -3.9 | 6.9 | 6.7e-12 | 0.81 | 0.01 | 0.83 | FALSE |
135 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | FAM57B | 0.65 | 0.02 | lasso | 4 | 0.02 | 2.6e-03 | 9.6 | -9.6 | 1.1e-21 | -0.97 | 0.02 | 0.96 | FALSE |
136 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DOC2A | 0.03 | 0.01 | blup | 47 | 0.02 | 3.8e-03 | 9.5 | -9.0 | 2.2e-19 | -0.92 | 0.01 | 0.74 | FALSE |
137 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | EIF3CL | 0.11 | 0.13 | blup | 18 | 0.18 | 9.0e-20 | 4.8 | 5.4 | 6.4e-08 | 0.05 | 0.01 | 0.98 | FALSE |
138 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LOC440356 | 0.04 | 0.01 | enet | 5 | 0.01 | 9.9e-03 | 5.6 | -6.1 | 1.1e-09 | -0.34 | 0.08 | 0.18 | FALSE |
139 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PPP4C | 0.03 | 0.02 | blup | 22 | 0.02 | 9.3e-04 | 8.3 | -6.5 | 6.1e-11 | -0.65 | 0.09 | 0.40 | FALSE |
140 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | LOC440356 | 0.03 | 0.03 | lasso | 2 | 0.02 | 2.0e-02 | 5.6 | -5.7 | 1.3e-08 | -0.38 | 0.06 | 0.13 | FALSE |
141 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PPP4C | 0.07 | 0.04 | blup | 22 | 0.07 | 8.8e-05 | -4.3 | -7.0 | 3.6e-12 | -0.85 | 0.01 | 0.92 | FALSE |
142 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | TBX6 | 0.04 | 0.04 | blup | 18 | 0.04 | 2.5e-03 | 8.1 | 7.5 | 5.5e-14 | 0.87 | 0.01 | 0.86 | FALSE |
143 | The Cancer Genome Atlas | Brain Lower Grade Glioma | INO80E | 0.07 | 0.03 | blup | 48 | 0.03 | 1.1e-04 | 9.5 | -7.2 | 6.4e-13 | -0.86 | 0.01 | 0.96 | FALSE |
144 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LOC440356 | 0.05 | 0.08 | lasso | 3 | 0.07 | 2.0e-08 | 5.6 | -5.4 | 5.5e-08 | -0.40 | 0.32 | 0.68 | FALSE |
145 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PPP4C | 0.08 | 0.05 | blup | 22 | 0.07 | 4.9e-08 | 8.3 | -6.5 | 6.5e-11 | -0.82 | 0.02 | 0.98 | FALSE |
146 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TBX6 | 0.09 | 0.07 | enet | 8 | 0.08 | 1.8e-09 | 8.3 | 5.6 | 1.7e-08 | 0.73 | 0.09 | 0.91 | FALSE |
147 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | YPEL3 | 0.15 | 0.00 | blup | 20 | 0.05 | 2.9e-03 | 9.6 | 9.6 | 1.1e-21 | 0.81 | 0.00 | 0.66 | FALSE |
148 | The Cancer Genome Atlas | Lung Adenocarcinoma | DOC2A | 0.01 | 0.02 | lasso | 2 | 0.02 | 2.5e-03 | -7.8 | -8.2 | 2.6e-16 | -0.77 | 0.05 | 0.41 | FALSE |
149 | The Cancer Genome Atlas | Lung Adenocarcinoma | LOC440356 | 0.07 | 0.07 | lasso | 4 | 0.08 | 3.3e-09 | 5.6 | -5.4 | 5.8e-08 | -0.42 | 0.27 | 0.73 | FALSE |
150 | The Cancer Genome Atlas | Lung Adenocarcinoma | TBX6 | 0.03 | 0.01 | blup | 18 | 0.01 | 1.1e-02 | 8.1 | 5.8 | 9.0e-09 | 0.83 | 0.00 | 0.85 | FALSE |
151 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MAPK3 | 0.03 | 0.01 | enet | 6 | 0.02 | 5.5e-03 | -3.9 | -7.2 | 7.3e-13 | -0.79 | 0.01 | 0.79 | FALSE |
152 | The Cancer Genome Atlas | Prostate Adenocarcinoma | DOC2A | 0.03 | 0.03 | lasso | 5 | 0.03 | 9.6e-04 | 9.5 | -9.6 | 1.2e-21 | -0.98 | 0.01 | 0.97 | FALSE |
153 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FAM57B | 0.04 | 0.05 | enet | 6 | 0.04 | 1.1e-04 | 8.3 | -8.9 | 5.1e-19 | -0.81 | 0.27 | 0.64 | FALSE |
154 | The Cancer Genome Atlas | Prostate Adenocarcinoma | KCTD13 | 0.02 | 0.02 | lasso | 2 | 0.02 | 3.9e-03 | -6.2 | 6.2 | 6.0e-10 | 0.71 | 0.04 | 0.42 | FALSE |
155 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TBX6 | 0.18 | 0.09 | enet | 7 | 0.15 | 8.5e-16 | 7.9 | 5.8 | 7.3e-09 | 0.75 | 0.11 | 0.89 | FALSE |
156 | The Cancer Genome Atlas | Rectum Adenocarcinoma | TBX6 | 0.25 | 0.08 | blup | 19 | 0.02 | 9.0e-02 | 8.3 | 5.2 | 2.2e-07 | 0.46 | 0.01 | 0.12 | FALSE |
157 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | LOC440356 | 0.18 | 0.14 | enet | 3 | 0.14 | 1.2e-04 | 5.6 | -5.4 | 6.3e-08 | -0.40 | 0.10 | 0.21 | FALSE |
158 | The Cancer Genome Atlas | Thyroid Carcinoma | DOC2A | 0.03 | 0.02 | blup | 48 | 0.03 | 6.1e-04 | 8.8 | -8.9 | 5.4e-19 | -0.94 | 0.02 | 0.88 | FALSE |
159 | The Cancer Genome Atlas | Thyroid Carcinoma | FAM57B | 0.06 | 0.05 | blup | 47 | 0.06 | 1.9e-06 | 8.1 | -6.9 | 4.1e-12 | -0.66 | 0.90 | 0.09 | FALSE |
160 | The Cancer Genome Atlas | Thyroid Carcinoma | GDPD3 | 0.10 | 0.05 | lasso | 5 | 0.05 | 1.9e-05 | -5.7 | 5.4 | 7.5e-08 | 0.26 | 0.51 | 0.03 | FALSE |
161 | The Cancer Genome Atlas | Thyroid Carcinoma | INO80E | 0.06 | 0.01 | blup | 49 | 0.02 | 2.8e-03 | -1.8 | -5.2 | 1.5e-07 | -0.44 | 0.02 | 0.09 | FALSE |