Best TWAS P=5.77e-23 · Best GWAS P=1.83e-21 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CFL1 | 0.04 | 0.00 | bslmm | 350 | 0.02 | 3.3e-03 | 2.7 | -5.9 | 4.1e-09 | -0.37 | 0.11 | 0.08 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | FIBP | 0.08 | 0.11 | enet | 20 | 0.12 | 8.1e-14 | 7.9 | 8.4 | 2.9e-17 | 0.64 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | SNX32 | 0.46 | 0.36 | lasso | 8 | 0.39 | 1.9e-50 | 7.4 | 7.2 | 5.2e-13 | 0.62 | 1.00 | 0.00 | TRUE |
4 | GTEx | Adipose Subcutaneous | NRXN2 | 0.11 | 0.05 | enet | 21 | 0.05 | 3.4e-05 | -5.0 | -5.7 | 1.2e-08 | -0.03 | 0.96 | 0.02 | FALSE |
5 | GTEx | Adipose Subcutaneous | CTSW | 0.30 | 0.18 | lasso | 6 | 0.16 | 3.9e-13 | 8.0 | -8.3 | 9.8e-17 | -0.75 | 0.40 | 0.60 | FALSE |
6 | GTEx | Adipose Visceral Omentum | TRPT1 | 0.16 | 0.05 | lasso | 5 | 0.04 | 3.0e-03 | -4.2 | -5.8 | 7.4e-09 | 0.03 | 0.09 | 0.35 | FALSE |
7 | GTEx | Adipose Visceral Omentum | CTSW | 0.22 | 0.20 | lasso | 11 | 0.19 | 5.1e-10 | 8.0 | -7.9 | 3.5e-15 | -0.71 | 0.77 | 0.23 | FALSE |
8 | GTEx | Adrenal Gland | FIBP | 0.20 | 0.02 | enet | 14 | 0.13 | 2.3e-05 | 1.2 | 5.3 | 1.1e-07 | 0.58 | 0.04 | 0.70 | FALSE |
9 | GTEx | Adrenal Gland | CTSW | 0.13 | 0.08 | lasso | 12 | 0.06 | 3.0e-03 | 9.5 | -9.9 | 5.8e-23 | -0.93 | 0.01 | 0.97 | TRUE |
10 | GTEx | Artery Aorta | CTSW | 0.29 | 0.26 | lasso | 7 | 0.25 | 3.2e-14 | 8.0 | -7.8 | 5.0e-15 | -0.72 | 0.85 | 0.15 | FALSE |
11 | GTEx | Artery Coronary | FIBP | 0.13 | 0.01 | lasso | 5 | 0.04 | 1.3e-02 | 8.0 | 8.5 | 2.6e-17 | 0.88 | 0.03 | 0.87 | FALSE |
12 | GTEx | Artery Tibial | NRXN2 | 0.17 | 0.12 | lasso | 5 | 0.12 | 6.9e-10 | -4.9 | -6.3 | 2.1e-10 | -0.02 | 0.97 | 0.03 | FALSE |
13 | GTEx | Artery Tibial | CTSW | 0.12 | 0.09 | enet | 22 | 0.11 | 1.2e-08 | 8.0 | -7.7 | 1.3e-14 | -0.69 | 0.88 | 0.12 | FALSE |
14 | GTEx | Artery Tibial | BANF1 | 0.05 | 0.05 | lasso | 5 | 0.06 | 3.4e-05 | 6.4 | -5.3 | 1.1e-07 | -0.73 | 0.26 | 0.46 | FALSE |
15 | GTEx | Brain Cerebellar Hemisphere | EFEMP2 | 0.35 | 0.15 | enet | 5 | 0.09 | 2.2e-03 | 6.5 | 8.0 | 1.6e-15 | 0.88 | 0.03 | 0.92 | FALSE |
16 | GTEx | Brain Cerebellum | PRDX5 | 0.14 | 0.16 | lasso | 5 | 0.13 | 1.0e-04 | -5.2 | 5.4 | 7.8e-08 | -0.02 | 0.02 | 0.94 | FALSE |
17 | GTEx | Brain Cerebellum | EFEMP2 | 0.45 | 0.40 | enet | 8 | 0.39 | 1.6e-12 | 6.2 | 7.7 | 1.9e-14 | 0.86 | 0.04 | 0.96 | FALSE |
18 | GTEx | Brain Cortex | PACS1 | 0.19 | 0.11 | lasso | 9 | 0.08 | 2.9e-03 | 5.4 | -5.8 | 5.1e-09 | -0.07 | 0.34 | 0.07 | TRUE |
19 | GTEx | Brain Frontal Cortex BA9 | RP11-783K16.5 | 0.26 | 0.03 | lasso | 9 | 0.02 | 9.1e-02 | -5.3 | -5.4 | 7.1e-08 | 0.02 | 0.17 | 0.24 | FALSE |
20 | GTEx | Brain Frontal Cortex BA9 | RP11-783K16.13 | 0.41 | 0.40 | enet | 7 | 0.27 | 7.4e-08 | -5.3 | -5.3 | 1.4e-07 | 0.01 | 0.94 | 0.06 | FALSE |
21 | GTEx | Brain Hippocampus | CTSW | 0.41 | -0.01 | enet | 35 | 0.07 | 8.9e-03 | -4.4 | -5.2 | 1.9e-07 | -0.45 | 0.05 | 0.17 | FALSE |
22 | GTEx | Brain Nucleus accumbens basal ganglia | RP11-783K16.13 | 0.24 | 0.30 | lasso | 3 | 0.24 | 5.2e-07 | -5.4 | -5.4 | 7.2e-08 | 0.00 | 0.07 | 0.91 | FALSE |
23 | GTEx | Brain Putamen basal ganglia | RP11-783K16.13 | 0.25 | 0.23 | lasso | 3 | 0.22 | 7.4e-06 | -5.4 | -5.4 | 7.2e-08 | 0.00 | 0.04 | 0.88 | FALSE |
24 | GTEx | Breast Mammary Tissue | CTSW | 0.25 | 0.19 | lasso | 8 | 0.16 | 1.3e-08 | 8.0 | -8.0 | 1.2e-15 | -0.70 | 0.54 | 0.46 | FALSE |
25 | GTEx | Breast Mammary Tissue | PPP1R14B | 0.10 | 0.01 | lasso | 3 | 0.02 | 2.8e-02 | -4.9 | -5.2 | 1.6e-07 | 0.02 | 0.02 | 0.82 | FALSE |
26 | GTEx | Breast Mammary Tissue (Male) | LTBP3 | 0.11 | -0.01 | enet | 26 | -0.01 | 5.8e-01 | 9.3 | 6.7 | 2.2e-11 | 0.66 | 0.03 | 0.24 | FALSE |
27 | GTEx | Breast Mammary Tissue (Male) | CTSW | 0.53 | 0.19 | enet | 19 | 0.25 | 1.7e-06 | 8.0 | -7.0 | 3.4e-12 | -0.78 | 0.06 | 0.90 | FALSE |
28 | GTEx | Breast Mammary Tissue (Male) | NEAT1 | 0.27 | 0.01 | enet | 29 | 0.03 | 6.3e-02 | 8.5 | 7.6 | 3.3e-14 | 0.59 | 0.03 | 0.40 | TRUE |
29 | GTEx | Breast Mammary Tissue (Female) | CTSW | 0.11 | 0.05 | enet | 14 | 0.04 | 2.6e-02 | 8.0 | -5.8 | 9.0e-09 | -0.50 | 0.06 | 0.20 | FALSE |
30 | GTEx | Breast Mammary Tissue (Female) | PPP1R14B | 0.10 | 0.06 | lasso | 2 | 0.08 | 2.0e-03 | -4.5 | -5.1 | 3.0e-07 | -0.02 | 0.03 | 0.37 | FALSE |
31 | GTEx | Breast Mammary Tissue (Female) | PACS1 | 0.08 | -0.01 | enet | 20 | 0.00 | 2.9e-01 | 7.9 | 5.7 | 1.2e-08 | 0.58 | 0.05 | 0.11 | FALSE |
32 | GTEx | Cells EBV-transformed lymphocytes | FIBP | 0.40 | 0.21 | enet | 26 | 0.29 | 4.3e-10 | 8.0 | 7.7 | 1.2e-14 | 0.68 | 0.87 | 0.12 | FALSE |
33 | GTEx | Cells EBV-transformed lymphocytes | FKBP2 | 0.27 | 0.06 | lasso | 6 | 0.14 | 2.1e-05 | -5.3 | -5.9 | 3.3e-09 | 0.09 | 0.03 | 0.89 | FALSE |
34 | GTEx | Cells Transformed fibroblasts | NRXN2 | 0.15 | 0.05 | lasso | 4 | 0.06 | 2.0e-05 | -5.0 | -5.9 | 3.5e-09 | -0.03 | 0.86 | 0.12 | FALSE |
35 | GTEx | Cells Transformed fibroblasts | FIBP | 0.20 | 0.13 | lasso | 5 | 0.17 | 1.7e-12 | 8.0 | 7.2 | 6.7e-13 | 0.64 | 1.00 | 0.00 | FALSE |
36 | GTEx | Cells Transformed fibroblasts | EFEMP2 | 0.06 | 0.06 | lasso | 3 | 0.07 | 7.8e-06 | 7.8 | 9.1 | 1.4e-19 | 0.93 | 0.00 | 1.00 | FALSE |
37 | GTEx | Colon Sigmoid | CTSW | 0.11 | 0.06 | lasso | 3 | 0.07 | 1.4e-03 | 6.2 | -6.4 | 2.0e-10 | -0.75 | 0.02 | 0.91 | FALSE |
38 | GTEx | Colon Transverse | CTSW | 0.37 | 0.27 | lasso | 8 | 0.26 | 1.5e-12 | 8.0 | -8.9 | 3.7e-19 | -0.85 | 0.07 | 0.93 | FALSE |
39 | GTEx | Esophagus Gastroesophageal Junction | CTSW | 0.18 | 0.15 | lasso | 2 | 0.14 | 1.2e-05 | 7.9 | -7.0 | 1.8e-12 | -0.65 | 0.16 | 0.68 | FALSE |
40 | GTEx | Esophagus Mucosa | PRDX5 | 0.06 | 0.07 | lasso | 3 | 0.05 | 1.8e-04 | -5.2 | 5.2 | 2.1e-07 | -0.03 | 0.03 | 0.95 | FALSE |
41 | GTEx | Esophagus Mucosa | PLCB3 | 0.28 | 0.24 | lasso | 6 | 0.23 | 1.1e-15 | -7.3 | 6.9 | 4.2e-12 | -0.03 | 0.00 | 1.00 | FALSE |
42 | GTEx | Esophagus Mucosa | CTSW | 0.32 | 0.19 | lasso | 6 | 0.17 | 1.3e-11 | 8.0 | -7.9 | 3.1e-15 | -0.70 | 0.99 | 0.01 | FALSE |
43 | GTEx | Esophagus Mucosa | FKBP2 | 0.09 | 0.02 | enet | 18 | 0.05 | 2.6e-04 | 2.3 | -5.3 | 9.1e-08 | -0.01 | 0.21 | 0.73 | FALSE |
44 | GTEx | Esophagus Muscularis | TRPT1 | 0.20 | 0.12 | enet | 18 | 0.15 | 2.3e-09 | -4.3 | -5.7 | 1.2e-08 | 0.03 | 0.24 | 0.75 | FALSE |
45 | GTEx | Esophagus Muscularis | FIBP | 0.11 | 0.04 | lasso | 4 | 0.04 | 1.2e-03 | 4.2 | 6.3 | 2.5e-10 | 0.52 | 0.41 | 0.42 | FALSE |
46 | GTEx | Esophagus Muscularis | CTSW | 0.29 | 0.32 | lasso | 5 | 0.32 | 2.9e-20 | 8.0 | -7.8 | 7.6e-15 | -0.68 | 1.00 | 0.00 | FALSE |
47 | GTEx | Esophagus Muscularis | FKBP2 | 0.12 | 0.12 | lasso | 3 | 0.09 | 2.4e-06 | -5.4 | -5.5 | 3.6e-08 | 0.00 | 0.10 | 0.90 | FALSE |
48 | GTEx | Esophagus Muscularis | YIF1A | 0.11 | 0.05 | enet | 11 | 0.04 | 2.4e-03 | 5.1 | -5.7 | 1.4e-08 | -0.03 | 0.98 | 0.00 | FALSE |
49 | GTEx | Esophagus Muscularis | CNIH2 | 0.06 | 0.02 | lasso | 8 | 0.02 | 2.8e-02 | 4.4 | 5.4 | 6.2e-08 | -0.03 | 0.18 | 0.15 | TRUE |
50 | GTEx | Esophagus Muscularis | CTD-3074O7.5 | 0.22 | 0.02 | enet | 17 | 0.09 | 3.7e-06 | -3.6 | 7.3 | 3.7e-13 | 0.12 | 0.26 | 0.54 | TRUE |
51 | GTEx | Heart Atrial Appendage | KLC2 | 0.10 | 0.04 | lasso | 8 | 0.09 | 1.1e-04 | 4.8 | -5.9 | 2.8e-09 | -0.02 | 0.46 | 0.02 | TRUE |
52 | GTEx | Heart Atrial Appendage | RP11-867G23.1 | 0.19 | 0.13 | lasso | 5 | 0.11 | 1.6e-05 | -6.1 | -6.0 | 2.3e-09 | -0.11 | 0.50 | 0.14 | FALSE |
53 | GTEx | Heart Left Ventricle | FIBP | 0.12 | 0.09 | lasso | 3 | 0.07 | 9.8e-05 | 8.0 | 8.7 | 5.0e-18 | 0.79 | 0.10 | 0.89 | FALSE |
54 | GTEx | Liver | CTSW | 0.27 | 0.03 | lasso | 13 | 0.02 | 1.0e-01 | 7.9 | -8.9 | 4.1e-19 | -0.90 | 0.02 | 0.72 | FALSE |
55 | GTEx | Lung | CTSW | 0.33 | 0.20 | lasso | 8 | 0.21 | 3.2e-16 | 8.0 | -7.7 | 1.9e-14 | -0.70 | 0.98 | 0.02 | FALSE |
56 | GTEx | Muscle Skeletal | FIBP | 0.12 | 0.13 | enet | 10 | 0.13 | 2.6e-12 | 8.0 | 7.6 | 2.4e-14 | 0.67 | 1.00 | 0.00 | FALSE |
57 | GTEx | Muscle Skeletal | CTSW | 0.09 | 0.06 | enet | 20 | 0.05 | 1.9e-05 | 8.0 | -5.3 | 1.3e-07 | -0.53 | 0.69 | 0.30 | FALSE |
58 | GTEx | Nerve Tibial | TRPT1 | 0.14 | 0.03 | lasso | 6 | 0.07 | 1.8e-05 | -6.4 | -6.1 | 1.1e-09 | 0.00 | 0.08 | 0.88 | FALSE |
59 | GTEx | Nerve Tibial | LTBP3 | 0.12 | 0.05 | lasso | 3 | 0.09 | 1.2e-06 | 4.7 | 5.3 | 1.4e-07 | 0.28 | 0.90 | 0.00 | FALSE |
60 | GTEx | Nerve Tibial | CTSW | 0.22 | 0.19 | lasso | 7 | 0.18 | 1.3e-12 | 8.0 | -8.2 | 1.6e-16 | -0.74 | 0.68 | 0.32 | FALSE |
61 | GTEx | Nerve Tibial | SIPA1 | 0.17 | 0.01 | enet | 19 | 0.06 | 6.8e-05 | -2.6 | 5.4 | 7.0e-08 | 0.36 | 0.27 | 0.21 | TRUE |
62 | GTEx | Pancreas | TRPT1 | 0.10 | 0.05 | lasso | 3 | 0.01 | 7.8e-02 | -5.0 | -5.8 | 4.9e-09 | 0.02 | 0.02 | 0.80 | FALSE |
63 | GTEx | Pancreas | CTSW | 0.13 | 0.11 | lasso | 3 | 0.08 | 4.0e-04 | 8.0 | -8.0 | 1.3e-15 | -0.70 | 0.20 | 0.42 | FALSE |
64 | GTEx | Pancreas | PPP1R14B | 0.11 | 0.12 | lasso | 5 | 0.09 | 9.6e-05 | -5.4 | -5.4 | 7.2e-08 | 0.01 | 0.02 | 0.97 | FALSE |
65 | GTEx | Prostate | CTSW | 0.29 | 0.26 | lasso | 8 | 0.26 | 2.9e-07 | 8.0 | -7.9 | 2.0e-15 | -0.69 | 0.54 | 0.08 | FALSE |
66 | GTEx | Skin Not Sun Exposed Suprapubic | NRXN2 | 0.10 | 0.07 | enet | 6 | 0.05 | 7.8e-04 | -4.9 | -5.1 | 2.8e-07 | -0.02 | 0.76 | 0.02 | FALSE |
67 | GTEx | Skin Not Sun Exposed Suprapubic | CTSW | 0.27 | 0.22 | lasso | 12 | 0.22 | 1.9e-12 | 8.0 | -9.1 | 6.1e-20 | -0.88 | 0.06 | 0.94 | FALSE |
68 | GTEx | Skin Sun Exposed Lower leg | PRDX5 | 0.08 | 0.07 | enet | 16 | 0.05 | 1.0e-04 | -5.2 | 5.1 | 2.8e-07 | -0.03 | 0.02 | 0.97 | FALSE |
69 | GTEx | Skin Sun Exposed Lower leg | CTSW | 0.19 | 0.19 | lasso | 6 | 0.18 | 1.1e-14 | 8.0 | -8.3 | 1.3e-16 | -0.74 | 0.90 | 0.10 | FALSE |
70 | GTEx | Small Intestine Terminal Ileum | CTSW | 0.41 | 0.29 | lasso | 13 | 0.27 | 1.1e-06 | 7.9 | -7.9 | 2.3e-15 | -0.74 | 0.21 | 0.68 | FALSE |
71 | GTEx | Spleen | CTSW | 0.30 | 0.31 | lasso | 2 | 0.26 | 1.9e-07 | 8.0 | -8.0 | 1.7e-15 | -0.70 | 0.26 | 0.73 | FALSE |
72 | GTEx | Stomach | CTSW | 0.18 | 0.20 | lasso | 7 | 0.19 | 1.7e-09 | 8.0 | -8.1 | 7.4e-16 | -0.71 | 0.54 | 0.46 | FALSE |
73 | GTEx | Testis | FIBP | 0.21 | 0.22 | lasso | 5 | 0.19 | 6.5e-09 | 8.0 | 7.7 | 1.6e-14 | 0.70 | 0.97 | 0.02 | FALSE |
74 | GTEx | Thyroid | CTSW | 0.18 | 0.22 | lasso | 2 | 0.21 | 4.6e-16 | 8.0 | -8.5 | 2.1e-17 | -0.77 | 0.96 | 0.04 | FALSE |
75 | GTEx | Thyroid | PACS1 | 0.09 | 0.04 | enet | 16 | 0.09 | 2.8e-07 | -7.1 | -5.4 | 5.7e-08 | -0.22 | 0.78 | 0.01 | FALSE |
76 | GTEx | Vagina | CFL1 | 0.18 | 0.09 | lasso | 9 | 0.07 | 9.0e-03 | 4.4 | -5.5 | 3.9e-08 | 0.04 | 0.13 | 0.05 | FALSE |
77 | GTEx | Vagina | RP11-755F10.1 | 0.39 | 0.02 | lasso | 6 | 0.09 | 3.9e-03 | 2.2 | 5.2 | 1.8e-07 | 0.03 | 0.09 | 0.06 | FALSE |
78 | GTEx | Whole Blood | CTSW | 0.08 | 0.01 | enet | 11 | 0.04 | 5.4e-05 | 8.0 | -5.7 | 1.1e-08 | -0.69 | 0.26 | 0.72 | FALSE |
79 | METSIM | Adipose | CTSW | 0.13 | 0.12 | lasso | 10 | 0.12 | 3.9e-17 | 8.0 | -7.8 | 7.7e-15 | -0.69 | 1.00 | 0.00 | FALSE |
80 | METSIM | Adipose | EFEMP2 | 0.07 | 0.05 | lasso | 8 | 0.04 | 4.2e-06 | 5.2 | 5.8 | 8.4e-09 | 0.61 | 0.99 | 0.01 | TRUE |
81 | METSIM | Adipose | FIBP | 0.05 | 0.02 | blup | 344 | 0.02 | 1.0e-03 | 8.0 | 6.3 | 3.3e-10 | 0.44 | 0.95 | 0.01 | FALSE |
82 | METSIM | Adipose | KLC2 | 0.06 | 0.06 | blup | 323 | 0.05 | 1.2e-08 | 4.8 | -5.8 | 6.6e-09 | 0.05 | 1.00 | 0.00 | TRUE |
83 | METSIM | Adipose | SNX32 | 0.17 | 0.13 | lasso | 4 | 0.16 | 3.7e-23 | 5.1 | 6.2 | 7.7e-10 | 0.59 | 1.00 | 0.00 | FALSE |
84 | NTR | Blood | CTSW | 0.20 | 0.18 | enet | 23 | 0.19 | 1.3e-57 | 8.1 | -7.0 | 3.6e-12 | -0.73 | 1.00 | 0.00 | FALSE |
85 | ROSMAP | Brain Pre-frontal Cortex | PRDX5 | 0.10 | 0.05 | lasso | 6 | 0.08 | 2.8e-10 | -7.2 | 6.4 | 1.4e-10 | 0.03 | 0.00 | 1.00 | FALSE |
86 | ROSMAP | Brain Pre-frontal Cortex | FIBP | 0.13 | 0.13 | lasso | 3 | 0.15 | 5.8e-19 | 8.0 | 7.1 | 9.2e-13 | 0.62 | 1.00 | 0.00 | FALSE |
87 | ROSMAP | Brain Pre-frontal Cortex | CTSW | 0.06 | 0.03 | bslmm | 328 | 0.03 | 3.6e-05 | 8.1 | -7.1 | 9.0e-13 | -0.46 | 0.53 | 0.13 | FALSE |
88 | ROSMAP | Brain Pre-frontal Cortex | EFEMP2 | 0.08 | 0.09 | enet | 13 | 0.09 | 6.8e-12 | -6.3 | 6.1 | 1.2e-09 | 0.77 | 0.43 | 0.57 | FALSE |
89 | ROSMAP | Brain Pre-frontal Cortex | SNX32 | 0.50 | 0.53 | lasso | 13 | 0.54 | 1.1e-81 | 7.4 | 7.1 | 1.2e-12 | 0.65 | 1.00 | 0.00 | FALSE |
90 | ROSMAP | Brain Pre-frontal Cortex | KCNK4 | 0.14 | 0.12 | bslmm | 334 | 0.11 | 3.0e-14 | -7.2 | -7.3 | 2.0e-13 | 0.01 | 0.00 | 1.00 | TRUE |
91 | ROSMAP | Brain Pre-frontal Cortex | TEX40 | 0.25 | 0.23 | lasso | 3 | 0.23 | 2.5e-29 | -7.2 | 7.2 | 7.1e-13 | 0.01 | 0.00 | 1.00 | FALSE |
92 | ROSMAP | Brain Pre-frontal Cortex | RP11-783K16.10 | 0.07 | 0.05 | lasso | 6 | 0.06 | 9.6e-08 | -7.2 | 7.0 | 1.7e-12 | 0.00 | 0.00 | 1.00 | FALSE |
93 | ROSMAP | Brain Pre-frontal Cortex | RP11-783K16.13 | 0.24 | 0.16 | enet | 11 | 0.16 | 1.1e-19 | -5.3 | -5.5 | 4.2e-08 | 0.00 | 1.00 | 0.00 | FALSE |
94 | YFS | Blood | CTSW | 0.53 | 0.41 | blup | 344 | 0.42 | 5.5e-149 | 8.0 | -7.7 | 1.8e-14 | -0.66 | 1.00 | 0.00 | FALSE |
95 | YFS | Blood | FIBP | 0.04 | 0.02 | bslmm | 343 | 0.03 | 6.4e-09 | 8.0 | 5.5 | 4.0e-08 | 0.40 | 0.99 | 0.00 | FALSE |
96 | YFS | Blood | MUS81 | 0.04 | 0.02 | blup | 348 | 0.04 | 6.3e-12 | 6.2 | -5.5 | 3.2e-08 | -0.67 | 0.99 | 0.01 | FALSE |
97 | YFS | Blood | PRDX5 | 0.51 | 0.40 | lasso | 9 | 0.43 | 4.0e-157 | -7.2 | -6.8 | 1.2e-11 | 0.00 | 0.01 | 0.99 | FALSE |
98 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CTSW | 0.12 | 0.16 | enet | 12 | 0.17 | 5.6e-14 | 8.0 | -8.0 | 9.2e-16 | -0.78 | 0.91 | 0.09 | FALSE |
99 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | SNX32 | 0.05 | 0.05 | blup | 60 | 0.03 | 1.1e-03 | 7.4 | 8.2 | 2.9e-16 | 0.77 | 0.26 | 0.56 | FALSE |
100 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CTSW | 0.25 | 0.39 | blup | 44 | 0.41 | 7.3e-91 | 8.0 | -8.7 | 4.1e-18 | -0.74 | 1.00 | 0.00 | FALSE |
101 | The Cancer Genome Atlas | Breast Invasive Carcinoma | EFEMP2 | 0.04 | 0.02 | lasso | 5 | 0.02 | 1.4e-05 | 6.6 | 7.5 | 8.1e-14 | 0.85 | 0.02 | 0.97 | FALSE |
102 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FIBP | 0.03 | 0.03 | blup | 45 | 0.03 | 2.6e-07 | 6.6 | 7.2 | 5.0e-13 | 0.82 | 0.08 | 0.92 | FALSE |
103 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PACS1 | 0.02 | 0.02 | blup | 77 | 0.02 | 8.5e-05 | 4.8 | -5.2 | 1.8e-07 | 0.08 | 0.50 | 0.12 | FALSE |
104 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SNX32 | 0.15 | 0.17 | blup | 60 | 0.17 | 2.9e-34 | 7.4 | 8.3 | 9.8e-17 | 0.72 | 1.00 | 0.00 | FALSE |
105 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | CTSW | 0.21 | 0.16 | blup | 44 | 0.17 | 7.5e-09 | 8.1 | -8.7 | 3.7e-18 | -0.81 | 0.22 | 0.78 | TRUE |
106 | The Cancer Genome Atlas | Colon Adenocarcinoma | CTSW | 0.40 | 0.34 | enet | 14 | 0.36 | 4.3e-22 | 7.9 | -7.8 | 7.8e-15 | -0.60 | 1.00 | 0.00 | FALSE |
107 | The Cancer Genome Atlas | Colon Adenocarcinoma | SNX32 | 0.11 | 0.08 | enet | 5 | 0.07 | 9.7e-05 | 6.1 | 6.5 | 9.0e-11 | 0.60 | 0.73 | 0.05 | FALSE |
108 | The Cancer Genome Atlas | Esophageal Carcinoma | CFL1 | 0.20 | 0.03 | blup | 47 | 0.10 | 3.8e-04 | -3.5 | -6.5 | 6.2e-11 | -0.69 | 0.01 | 0.48 | FALSE |
109 | The Cancer Genome Atlas | Esophageal Carcinoma | CTSW | 0.37 | 0.17 | blup | 44 | 0.24 | 3.7e-08 | 8.0 | -7.2 | 7.9e-13 | -0.67 | 0.93 | 0.05 | FALSE |
110 | The Cancer Genome Atlas | Glioblastoma Multiforme | CTSW | 0.16 | 0.18 | enet | 16 | 0.19 | 2.3e-06 | 9.5 | -9.8 | 1.4e-22 | -0.93 | 0.01 | 0.99 | FALSE |
111 | The Cancer Genome Atlas | Glioblastoma Multiforme | SNX32 | 0.13 | 0.05 | blup | 60 | 0.09 | 1.1e-03 | 7.4 | 7.3 | 3.6e-13 | 0.72 | 0.08 | 0.47 | FALSE |
112 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C11orf20 | 0.06 | 0.03 | lasso | 3 | 0.02 | 7.2e-04 | -7.2 | 7.2 | 4.2e-13 | -0.01 | 0.00 | 0.98 | FALSE |
113 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CTSW | 0.31 | 0.32 | lasso | 4 | 0.34 | 1.8e-39 | 8.1 | -8.3 | 8.9e-17 | -0.74 | 1.00 | 0.00 | FALSE |
114 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | DKFZp761E198 | 0.07 | 0.02 | blup | 39 | 0.03 | 5.9e-04 | -3.2 | -5.1 | 2.8e-07 | -0.40 | 0.02 | 0.57 | FALSE |
115 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SNX32 | 0.15 | 0.14 | enet | 8 | 0.15 | 2.5e-16 | 5.1 | 6.5 | 6.4e-11 | 0.62 | 1.00 | 0.00 | FALSE |
116 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C11orf20 | 0.07 | 0.07 | lasso | 4 | 0.07 | 6.4e-08 | -7.2 | 7.2 | 5.4e-13 | 0.01 | 0.00 | 1.00 | FALSE |
117 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CTSW | 0.23 | 0.25 | lasso | 6 | 0.25 | 3.2e-28 | 8.0 | -8.0 | 1.2e-15 | -0.70 | 1.00 | 0.00 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FIBP | 0.04 | 0.02 | blup | 45 | 0.04 | 4.0e-05 | 7.4 | 5.7 | 1.1e-08 | 0.53 | 0.54 | 0.05 | FALSE |
119 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SLC22A12 | 0.02 | 0.02 | blup | 38 | 0.02 | 4.3e-03 | -6.5 | -5.5 | 3.6e-08 | -0.03 | 0.01 | 0.84 | FALSE |
120 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SNX32 | 0.15 | 0.11 | blup | 60 | 0.15 | 6.0e-17 | 7.4 | 6.7 | 2.0e-11 | 0.55 | 1.00 | 0.00 | FALSE |
121 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CTSW | 0.32 | 0.26 | lasso | 1 | 0.26 | 4.3e-15 | 8.1 | -8.1 | 7.5e-16 | -0.67 | 1.00 | 0.00 | FALSE |
122 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FIBP | 0.05 | 0.01 | blup | 44 | 0.02 | 1.5e-02 | 7.4 | 8.0 | 1.7e-15 | 0.67 | 0.04 | 0.25 | FALSE |
123 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SLC22A12 | 0.05 | 0.02 | blup | 38 | 0.03 | 6.3e-03 | -6.7 | -6.4 | 1.8e-10 | -0.03 | 0.01 | 0.70 | TRUE |
124 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SNX32 | 0.11 | 0.06 | blup | 60 | 0.09 | 1.3e-05 | 8.0 | 7.8 | 5.5e-15 | 0.68 | 0.80 | 0.09 | FALSE |
125 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C11orf20 | 0.08 | 0.07 | enet | 6 | 0.08 | 8.1e-10 | -5.5 | 5.9 | 3.8e-09 | -0.01 | 0.00 | 1.00 | FALSE |
126 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CTSW | 0.13 | 0.14 | blup | 44 | 0.14 | 7.0e-16 | 8.0 | -7.7 | 1.8e-14 | -0.68 | 1.00 | 0.00 | FALSE |
127 | The Cancer Genome Atlas | Brain Lower Grade Glioma | EFEMP2 | 0.01 | 0.00 | blup | 45 | 0.01 | 3.0e-02 | 5.1 | 8.2 | 3.0e-16 | 0.77 | 0.03 | 0.31 | FALSE |
128 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FIBP | 0.04 | 0.04 | lasso | 3 | 0.04 | 1.2e-05 | 7.4 | 7.5 | 5.5e-14 | 0.64 | 0.89 | 0.06 | FALSE |
129 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SLC22A12 | 0.04 | 0.02 | blup | 38 | 0.01 | 3.3e-02 | -6.2 | -5.5 | 4.3e-08 | -0.05 | 0.03 | 0.45 | FALSE |
130 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SNX32 | 0.15 | 0.27 | enet | 23 | 0.26 | 6.1e-30 | 7.4 | 7.5 | 9.5e-14 | 0.71 | 1.00 | 0.00 | FALSE |
131 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | CTSW | 0.63 | 0.41 | lasso | 8 | 0.42 | 1.2e-21 | 8.1 | -8.1 | 4.9e-16 | -0.68 | 1.00 | 0.00 | FALSE |
132 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | FERMT3 | 0.12 | 0.03 | blup | 45 | 0.07 | 3.9e-04 | -5.3 | 5.3 | 1.2e-07 | 0.00 | 0.12 | 0.47 | FALSE |
133 | The Cancer Genome Atlas | Lung Adenocarcinoma | CTSW | 0.23 | 0.29 | lasso | 7 | 0.29 | 1.0e-33 | 8.1 | -8.1 | 4.5e-16 | -0.71 | 1.00 | 0.00 | FALSE |
134 | The Cancer Genome Atlas | Lung Adenocarcinoma | FIBP | 0.02 | 0.01 | blup | 45 | 0.02 | 1.3e-03 | 8.1 | 8.3 | 1.3e-16 | 0.75 | 0.08 | 0.27 | FALSE |
135 | The Cancer Genome Atlas | Lung Adenocarcinoma | SNX32 | 0.14 | 0.09 | blup | 60 | 0.13 | 8.8e-15 | 7.4 | 8.1 | 5.6e-16 | 0.63 | 1.00 | 0.00 | FALSE |
136 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C11orf20 | 0.04 | 0.03 | lasso | 2 | 0.03 | 4.2e-04 | -7.2 | 7.1 | 1.0e-12 | 0.01 | 0.00 | 0.99 | FALSE |
137 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CTSW | 0.25 | 0.34 | enet | 14 | 0.34 | 4.1e-40 | 8.1 | -8.3 | 8.1e-17 | -0.73 | 1.00 | 0.00 | FALSE |
138 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FIBP | 0.04 | 0.01 | blup | 43 | 0.01 | 1.1e-02 | 8.1 | 8.3 | 8.9e-17 | 0.81 | 0.02 | 0.32 | FALSE |
139 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SNX32 | 0.22 | 0.21 | enet | 16 | 0.24 | 6.2e-27 | 7.4 | 7.5 | 9.0e-14 | 0.70 | 1.00 | 0.00 | FALSE |
140 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | CTSW | 0.20 | 0.23 | lasso | 9 | 0.23 | 1.5e-15 | 8.0 | -8.1 | 6.4e-16 | -0.70 | 1.00 | 0.00 | FALSE |
141 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SNX32 | 0.08 | 0.10 | blup | 60 | 0.11 | 6.0e-08 | 7.4 | 8.0 | 1.2e-15 | 0.69 | 0.94 | 0.05 | FALSE |
142 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | VEGFB | 0.04 | 0.04 | blup | 47 | 0.02 | 8.9e-03 | -4.9 | 6.1 | 8.2e-10 | -0.01 | 0.03 | 0.46 | FALSE |
143 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | CTSW | 0.30 | 0.23 | lasso | 11 | 0.24 | 1.7e-10 | 8.0 | -8.1 | 4.8e-16 | -0.71 | 0.94 | 0.06 | FALSE |
144 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | SNX32 | 0.40 | 0.17 | blup | 60 | 0.22 | 1.3e-09 | 5.1 | 5.7 | 1.1e-08 | 0.64 | 0.85 | 0.14 | FALSE |
145 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | TRMT112 | 0.16 | 0.05 | blup | 28 | 0.04 | 1.2e-02 | -7.2 | -5.9 | 4.5e-09 | 0.00 | 0.00 | 0.74 | FALSE |
146 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CTSW | 0.16 | 0.10 | enet | 24 | 0.15 | 1.9e-06 | 7.9 | -7.7 | 9.9e-15 | -0.59 | 0.49 | 0.32 | FALSE |
147 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | SNX32 | 0.30 | 0.19 | lasso | 1 | 0.14 | 3.9e-06 | 7.4 | 7.4 | 1.2e-13 | 0.64 | 0.76 | 0.12 | FALSE |
148 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C11orf20 | 0.07 | 0.03 | enet | 10 | 0.05 | 3.8e-06 | -7.3 | 6.2 | 6.8e-10 | -0.04 | 0.00 | 0.99 | FALSE |
149 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CTSW | 0.29 | 0.49 | enet | 12 | 0.49 | 3.4e-58 | 8.0 | -8.0 | 9.9e-16 | -0.70 | 1.00 | 0.00 | FALSE |
150 | The Cancer Genome Atlas | Prostate Adenocarcinoma | KCNK7 | 0.04 | 0.02 | blup | 42 | 0.03 | 3.1e-04 | 4.8 | -5.1 | 3.0e-07 | -0.26 | 0.01 | 0.83 | FALSE |
151 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SNX32 | 0.07 | 0.08 | lasso | 4 | 0.10 | 2.0e-10 | 7.9 | 7.0 | 2.5e-12 | 0.64 | 1.00 | 0.00 | FALSE |
152 | The Cancer Genome Atlas | Rectum Adenocarcinoma | CTSW | 0.21 | 0.05 | blup | 39 | 0.07 | 9.1e-03 | 8.0 | -8.2 | 1.8e-16 | -0.79 | 0.04 | 0.37 | FALSE |
153 | The Cancer Genome Atlas | Soft Tissue Sarcoma | CTSW | 0.18 | 0.22 | lasso | 3 | 0.22 | 4.1e-13 | 8.0 | -8.0 | 1.2e-15 | -0.70 | 1.00 | 0.00 | FALSE |
154 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FIBP | 0.06 | 0.05 | blup | 45 | 0.04 | 1.2e-03 | 8.1 | 7.2 | 5.2e-13 | 0.57 | 0.14 | 0.22 | FALSE |
155 | The Cancer Genome Atlas | Soft Tissue Sarcoma | SNX32 | 0.08 | 0.08 | lasso | 2 | 0.10 | 1.5e-06 | 7.8 | 9.0 | 3.3e-19 | 0.85 | 0.05 | 0.95 | FALSE |
156 | The Cancer Genome Atlas | Stomach Adenocarcinoma | CTSW | 0.24 | 0.35 | lasso | 7 | 0.36 | 3.0e-27 | 8.1 | -7.6 | 2.9e-14 | -0.63 | 1.00 | 0.00 | FALSE |
157 | The Cancer Genome Atlas | Stomach Adenocarcinoma | SNX32 | 0.12 | 0.13 | blup | 60 | 0.13 | 1.2e-09 | 8.0 | 9.0 | 2.2e-19 | 0.68 | 0.99 | 0.01 | FALSE |
158 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | CTSW | 0.26 | 0.29 | lasso | 9 | 0.27 | 4.7e-10 | 8.0 | -8.6 | 8.7e-18 | -0.78 | 0.70 | 0.30 | FALSE |
159 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | SNX32 | 0.23 | 0.15 | blup | 60 | 0.12 | 6.3e-05 | 7.4 | 6.8 | 7.7e-12 | 0.63 | 0.40 | 0.28 | FALSE |
160 | The Cancer Genome Atlas | Thyroid Carcinoma | CTSW | 0.25 | 0.37 | lasso | 8 | 0.37 | 5.2e-38 | 8.1 | -8.1 | 6.4e-16 | -0.71 | 1.00 | 0.00 | FALSE |
161 | The Cancer Genome Atlas | Thyroid Carcinoma | FIBP | 0.04 | 0.00 | blup | 45 | 0.02 | 8.0e-03 | 4.2 | 5.9 | 2.8e-09 | 0.27 | 0.02 | 0.03 | FALSE |
162 | The Cancer Genome Atlas | Thyroid Carcinoma | PRDX5 | 0.05 | 0.04 | lasso | 3 | 0.02 | 1.6e-03 | -7.3 | 7.3 | 2.8e-13 | 0.00 | 0.00 | 0.95 | FALSE |
163 | The Cancer Genome Atlas | Thyroid Carcinoma | SNX32 | 0.23 | 0.26 | lasso | 7 | 0.25 | 6.4e-24 | 7.4 | 7.3 | 2.6e-13 | 0.63 | 1.00 | 0.00 | FALSE |
164 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | CTSW | 0.24 | 0.21 | enet | 21 | 0.24 | 2.9e-07 | 8.0 | -8.4 | 3.4e-17 | -0.72 | 0.80 | 0.16 | FALSE |