Best TWAS P=6.48e-186 · Best GWAS P=2.98e-246 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ANKS1A | 0.15 | 0.12 | lasso | 7 | 0.12 | 2.4e-14 | 8.21 | 6.1 | 1.1e-09 | 0.05 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | C6orf106 | 0.29 | 0.21 | bslmm | 382 | 0.23 | 6.9e-28 | 26.78 | 23.7 | 1.5e-124 | -0.07 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | ETV7 | 0.13 | 0.14 | lasso | 6 | 0.14 | 1.1e-16 | -5.07 | -5.2 | 2.0e-07 | -0.01 | 1.00 | 0.00 | TRUE |
4 | CommonMind | Brain Pre-frontal Cortex | FANCE | 0.03 | 0.02 | bslmm | 420 | 0.01 | 1.7e-02 | -14.67 | -20.8 | 3.4e-96 | 0.08 | 0.27 | 0.30 | TRUE |
5 | CommonMind | Brain Pre-frontal Cortex | MAPK13 | 0.13 | 0.09 | lasso | 5 | 0.08 | 3.0e-10 | -4.93 | -6.5 | 9.9e-11 | -0.10 | 1.00 | 0.00 | FALSE |
6 | CommonMind | Brain Pre-frontal Cortex | PACSIN1 | 0.07 | 0.01 | lasso | 6 | 0.02 | 1.1e-03 | 27.44 | 22.4 | 2.2e-111 | 0.16 | 0.33 | 0.03 | FALSE |
7 | CommonMind | Brain Pre-frontal Cortex | RPL10A | 0.21 | 0.09 | enet | 30 | 0.11 | 2.6e-13 | -12.08 | -10.4 | 2.6e-25 | -0.01 | 1.00 | 0.00 | FALSE |
8 | CommonMind | Brain Pre-frontal Cortex | SNRPC | 0.10 | 0.16 | lasso | 4 | 0.15 | 3.6e-18 | 3.86 | -5.8 | 6.9e-09 | -0.13 | 1.00 | 0.00 | FALSE |
9 | CommonMind | Brain Pre-frontal Cortex | TAF11 | 0.18 | 0.09 | lasso | 7 | 0.11 | 6.4e-13 | -10.26 | -7.9 | 2.0e-15 | 0.00 | 1.00 | 0.00 | FALSE |
10 | GTEx | Adipose Subcutaneous | RPL10A | 0.06 | 0.02 | enet | 27 | 0.03 | 2.6e-03 | -12.34 | -10.5 | 6.0e-26 | -0.10 | 0.32 | 0.04 | FALSE |
11 | GTEx | Adrenal Gland | UHRF1BP1 | 0.32 | 0.26 | enet | 33 | 0.33 | 1.3e-12 | 4.24 | -5.4 | 8.2e-08 | 0.09 | 1.00 | 0.00 | FALSE |
12 | GTEx | Adrenal Gland | SNRPC | 0.13 | 0.04 | lasso | 6 | 0.03 | 2.7e-02 | 12.50 | -6.1 | 8.2e-10 | -0.14 | 0.26 | 0.04 | FALSE |
13 | GTEx | Artery Aorta | ANKS1A | 0.10 | 0.10 | lasso | 2 | 0.08 | 2.4e-05 | 7.04 | 7.4 | 1.7e-13 | -0.08 | 0.39 | 0.03 | FALSE |
14 | GTEx | Artery Aorta | SNRPC | 0.06 | 0.03 | enet | 14 | 0.02 | 1.8e-02 | 8.35 | 7.5 | 4.9e-14 | -0.06 | 0.24 | 0.04 | FALSE |
15 | GTEx | Artery Aorta | RPL10A | 0.20 | 0.12 | lasso | 5 | 0.11 | 8.8e-07 | -12.09 | -12.5 | 9.0e-36 | -0.04 | 0.96 | 0.00 | FALSE |
16 | GTEx | Artery Coronary | ANKS1A | 0.23 | 0.09 | lasso | 17 | 0.09 | 5.8e-04 | 1.65 | -5.4 | 8.3e-08 | -0.05 | 0.06 | 0.06 | FALSE |
17 | GTEx | Artery Tibial | SNRPC | 0.06 | 0.06 | lasso | 4 | 0.05 | 1.3e-04 | 4.19 | -5.2 | 2.2e-07 | -0.12 | 0.97 | 0.00 | FALSE |
18 | GTEx | Artery Tibial | C6orf106 | 0.07 | 0.02 | lasso | 4 | 0.02 | 8.8e-03 | -13.04 | 17.7 | 8.2e-70 | -0.13 | 0.10 | 0.06 | FALSE |
19 | GTEx | Artery Tibial | RPL10A | 0.11 | 0.08 | lasso | 2 | 0.09 | 1.5e-07 | -12.26 | -12.1 | 6.7e-34 | -0.08 | 1.00 | 0.00 | FALSE |
20 | GTEx | Brain Caudate basal ganglia | SNRPC | 0.19 | 0.15 | lasso | 3 | 0.06 | 7.7e-03 | 4.10 | -6.9 | 7.0e-12 | -0.11 | 0.44 | 0.03 | FALSE |
21 | GTEx | Brain Cerebellar Hemisphere | UHRF1BP1 | 0.22 | 0.16 | lasso | 12 | 0.15 | 1.0e-04 | 4.10 | 5.9 | 2.8e-09 | 0.11 | 0.11 | 0.75 | FALSE |
22 | GTEx | Brain Cerebellum | PPARD | 0.37 | 0.06 | lasso | 18 | 0.13 | 9.3e-05 | 1.96 | -12.5 | 7.8e-36 | 0.05 | 0.14 | 0.04 | FALSE |
23 | GTEx | Brain Cerebellum | MAPK13 | 0.42 | 0.05 | enet | 19 | 0.31 | 5.7e-10 | 7.01 | 9.0 | 1.7e-19 | 0.10 | 0.78 | 0.01 | TRUE |
24 | GTEx | Brain Cortex | C6orf106 | 0.22 | 0.07 | enet | 16 | 0.10 | 1.1e-03 | 27.44 | 25.6 | 1.3e-144 | 0.26 | 0.51 | 0.03 | TRUE |
25 | GTEx | Brain Frontal Cortex BA9 | TAF11 | 0.25 | 0.01 | lasso | 10 | 0.00 | 2.7e-01 | -10.26 | -10.2 | 1.2e-24 | 0.00 | 0.07 | 0.05 | FALSE |
26 | GTEx | Brain Frontal Cortex BA9 | RPS10 | 0.21 | 0.08 | lasso | 3 | 0.06 | 8.6e-03 | 5.11 | 9.5 | 2.0e-21 | -0.05 | 0.12 | 0.05 | FALSE |
27 | GTEx | Cells EBV-transformed lymphocytes | BRPF3 | 0.24 | 0.01 | enet | 26 | 0.00 | 4.2e-01 | 8.24 | -10.1 | 6.8e-24 | -0.11 | 0.07 | 0.06 | TRUE |
28 | GTEx | Cells EBV-transformed lymphocytes | C6orf106 | 0.20 | 0.00 | lasso | 5 | 0.00 | 2.7e-01 | 18.27 | 13.9 | 1.2e-43 | 0.08 | 0.07 | 0.05 | FALSE |
29 | GTEx | Cells Transformed fibroblasts | TEAD3 | 0.36 | 0.29 | enet | 27 | 0.32 | 8.4e-25 | 5.07 | -10.1 | 8.2e-24 | -0.09 | 1.00 | 0.00 | FALSE |
30 | GTEx | Cells Transformed fibroblasts | UHRF1BP1 | 0.34 | 0.32 | enet | 44 | 0.31 | 2.4e-23 | 4.23 | 8.4 | 2.9e-17 | 0.15 | 1.00 | 0.00 | TRUE |
31 | GTEx | Cells Transformed fibroblasts | RPS10 | 0.12 | 0.05 | lasso | 4 | 0.06 | 4.5e-05 | 8.90 | 7.1 | 1.3e-12 | 0.09 | 0.98 | 0.00 | TRUE |
32 | GTEx | Cells Transformed fibroblasts | MAPK13 | 0.12 | 0.05 | enet | 20 | 0.05 | 7.5e-05 | 9.90 | -8.9 | 8.0e-19 | -0.11 | 0.80 | 0.01 | FALSE |
33 | GTEx | Cells Transformed fibroblasts | NUDT3 | 0.11 | 0.03 | lasso | 3 | 0.02 | 9.2e-03 | 14.46 | -13.4 | 7.7e-41 | -0.40 | 0.24 | 0.03 | FALSE |
34 | GTEx | Colon Transverse | UHRF1BP1 | 0.42 | 0.28 | lasso | 4 | 0.28 | 1.6e-13 | 3.95 | 5.6 | 2.4e-08 | 0.09 | 1.00 | 0.00 | FALSE |
35 | GTEx | Colon Transverse | MAPK13 | 0.19 | 0.02 | enet | 17 | 0.08 | 8.1e-05 | 8.24 | 5.1 | 3.0e-07 | 0.09 | 0.30 | 0.05 | TRUE |
36 | GTEx | Colon Transverse | C6orf106 | 0.15 | 0.05 | lasso | 1 | 0.03 | 1.5e-02 | 18.67 | 18.7 | 7.9e-78 | -0.03 | 0.17 | 0.04 | FALSE |
37 | GTEx | Colon Transverse | RPL10A | 0.12 | 0.05 | lasso | 4 | 0.05 | 2.5e-03 | -12.26 | -12.9 | 5.5e-38 | -0.06 | 0.25 | 0.13 | FALSE |
38 | GTEx | Esophagus Mucosa | UHRF1BP1 | 0.14 | 0.15 | enet | 28 | 0.17 | 1.3e-11 | 3.93 | 7.2 | 8.2e-13 | 0.14 | 1.00 | 0.00 | FALSE |
39 | GTEx | Esophagus Mucosa | MAPK13 | 0.34 | 0.29 | lasso | 5 | 0.38 | 2.3e-26 | -4.86 | 8.0 | 1.6e-15 | 0.10 | 1.00 | 0.00 | FALSE |
40 | GTEx | Esophagus Mucosa | RPL10A | 0.14 | 0.10 | enet | 17 | 0.09 | 2.1e-06 | -12.26 | -16.8 | 4.9e-63 | -0.12 | 0.92 | 0.02 | FALSE |
41 | GTEx | Esophagus Muscularis | MAPK13 | 0.13 | 0.09 | enet | 26 | 0.08 | 1.5e-05 | 4.68 | 9.0 | 1.8e-19 | 0.08 | 0.86 | 0.01 | TRUE |
42 | GTEx | Esophagus Muscularis | RPL10A | 0.31 | 0.19 | lasso | 5 | 0.18 | 4.6e-11 | -12.09 | -12.2 | 2.0e-34 | -0.01 | 1.00 | 0.00 | FALSE |
43 | GTEx | Esophagus Muscularis | NUDT3 | 0.12 | 0.00 | lasso | 7 | 0.02 | 3.2e-02 | 8.87 | -9.1 | 1.2e-19 | -0.13 | 0.14 | 0.07 | FALSE |
44 | GTEx | Heart Atrial Appendage | TEAD3 | 0.17 | 0.08 | lasso | 6 | 0.09 | 1.1e-04 | 6.55 | -8.1 | 5.0e-16 | 0.01 | 0.56 | 0.03 | TRUE |
45 | GTEx | Heart Left Ventricle | RP1-179N16.6 | 0.23 | 0.01 | enet | 34 | 0.12 | 4.3e-07 | 12.97 | -6.7 | 1.9e-11 | -0.07 | 0.16 | 0.04 | FALSE |
46 | GTEx | Liver | UHRF1BP1 | 0.13 | 0.04 | lasso | 3 | 0.05 | 1.8e-02 | 4.24 | 7.4 | 1.9e-13 | 0.09 | 0.14 | 0.22 | FALSE |
47 | GTEx | Lung | RPL10A | 0.21 | 0.09 | enet | 53 | 0.09 | 1.2e-07 | -12.09 | -10.5 | 6.6e-26 | -0.03 | 0.95 | 0.01 | FALSE |
48 | GTEx | Muscle Skeletal | SNRPC | 0.03 | 0.02 | lasso | 3 | 0.02 | 8.3e-03 | 4.19 | -8.6 | 1.3e-17 | -0.13 | 0.38 | 0.02 | FALSE |
49 | GTEx | Muscle Skeletal | C6orf106 | 0.08 | 0.06 | lasso | 4 | 0.06 | 7.1e-07 | 12.60 | -14.1 | 3.5e-45 | -0.10 | 0.98 | 0.00 | TRUE |
50 | GTEx | Muscle Skeletal | RPL10A | 0.10 | 0.05 | enet | 17 | 0.04 | 3.9e-05 | -12.08 | -9.3 | 1.9e-20 | -0.04 | 0.72 | 0.02 | FALSE |
51 | GTEx | Nerve Tibial | DEF6 | 0.15 | 0.00 | lasso | 8 | 0.00 | 1.6e-01 | -13.36 | 15.2 | 1.9e-52 | -0.01 | 0.18 | 0.05 | FALSE |
52 | GTEx | Nerve Tibial | C6orf106 | 0.11 | 0.07 | enet | 17 | 0.07 | 1.3e-05 | 26.76 | 28.5 | 3.7e-178 | 0.03 | 0.71 | 0.01 | FALSE |
53 | GTEx | Nerve Tibial | RPL10A | 0.14 | 0.12 | lasso | 3 | 0.12 | 9.7e-09 | -12.09 | -10.8 | 2.4e-27 | -0.01 | 1.00 | 0.00 | FALSE |
54 | GTEx | Ovary | ETV7 | 0.34 | 0.00 | enet | 24 | 0.11 | 9.6e-04 | 6.45 | -5.2 | 1.7e-07 | -0.06 | 0.06 | 0.06 | FALSE |
55 | GTEx | Ovary | MAPK13 | 0.23 | -0.01 | enet | 40 | 0.02 | 8.7e-02 | 6.84 | 12.3 | 5.6e-35 | 0.06 | 0.08 | 0.05 | FALSE |
56 | GTEx | Pancreas | MAPK13 | 0.20 | 0.14 | lasso | 5 | 0.16 | 3.4e-07 | 8.24 | 8.9 | 7.2e-19 | 0.12 | 0.80 | 0.02 | TRUE |
57 | GTEx | Pancreas | C6orf106 | 0.14 | 0.11 | enet | 11 | 0.13 | 2.8e-06 | 12.50 | 21.9 | 2.1e-106 | 0.10 | 0.86 | 0.01 | FALSE |
58 | GTEx | Pituitary | RP1-179N16.6 | 0.34 | 0.12 | lasso | 6 | 0.24 | 9.3e-07 | 9.90 | -7.1 | 1.3e-12 | -0.05 | 0.10 | 0.07 | TRUE |
59 | GTEx | Skin Not Sun Exposed Suprapubic | TEAD3 | 0.15 | 0.06 | lasso | 5 | 0.08 | 2.5e-05 | -11.83 | -14.7 | 1.3e-48 | -0.09 | 0.38 | 0.52 | FALSE |
60 | GTEx | Skin Not Sun Exposed Suprapubic | KCTD20 | 0.29 | 0.18 | lasso | 9 | 0.16 | 2.9e-09 | -4.98 | 5.8 | 8.8e-09 | 0.00 | 1.00 | 0.00 | FALSE |
61 | GTEx | Skin Not Sun Exposed Suprapubic | SNRPC | 0.18 | 0.04 | enet | 37 | 0.03 | 1.0e-02 | 4.26 | 10.7 | 1.7e-26 | -0.04 | 0.25 | 0.03 | FALSE |
62 | GTEx | Skin Not Sun Exposed Suprapubic | MAPK13 | 0.20 | 0.05 | lasso | 5 | 0.08 | 2.8e-05 | -4.86 | 9.5 | 2.8e-21 | 0.10 | 0.90 | 0.01 | FALSE |
63 | GTEx | Skin Sun Exposed Lower leg | SRPK1 | 0.14 | 0.00 | enet | 27 | 0.02 | 1.2e-02 | -1.93 | 11.7 | 2.0e-31 | 0.14 | 0.22 | 0.11 | TRUE |
64 | GTEx | Skin Sun Exposed Lower leg | KCTD20 | 0.13 | 0.12 | lasso | 4 | 0.13 | 1.2e-10 | -4.98 | 5.3 | 1.4e-07 | 0.01 | 1.00 | 0.00 | FALSE |
65 | GTEx | Skin Sun Exposed Lower leg | MAPK13 | 0.23 | 0.20 | enet | 7 | 0.23 | 4.8e-19 | -4.86 | 7.0 | 2.5e-12 | 0.11 | 1.00 | 0.00 | FALSE |
66 | GTEx | Skin Sun Exposed Lower leg | C6orf106 | 0.09 | 0.04 | enet | 25 | 0.02 | 4.6e-03 | -9.78 | 21.9 | 1.9e-106 | 0.04 | 0.38 | 0.02 | FALSE |
67 | GTEx | Skin Sun Exposed Lower leg | RPL10A | 0.24 | 0.00 | enet | 39 | 0.01 | 2.0e-02 | -15.40 | 7.5 | 6.0e-14 | 0.02 | 0.06 | 0.17 | FALSE |
68 | GTEx | Small Intestine Terminal Ileum | UHRF1BP1 | 0.20 | 0.03 | lasso | 5 | 0.00 | 3.4e-01 | 4.09 | 6.8 | 9.8e-12 | 0.13 | 0.14 | 0.10 | FALSE |
69 | GTEx | Spleen | UHRF1BP1 | 0.34 | 0.21 | enet | 36 | 0.17 | 4.5e-05 | 3.87 | 6.8 | 9.9e-12 | 0.18 | 0.62 | 0.04 | FALSE |
70 | GTEx | Stomach | UHRF1BP1 | 0.24 | 0.22 | enet | 20 | 0.23 | 2.2e-11 | 7.04 | 5.4 | 5.4e-08 | 0.20 | 1.00 | 0.00 | FALSE |
71 | GTEx | Testis | ZNF76 | 0.15 | 0.14 | enet | 8 | 0.12 | 4.4e-06 | -12.91 | 13.6 | 2.6e-42 | -0.02 | 0.94 | 0.00 | FALSE |
72 | GTEx | Testis | SRPK1 | 0.12 | 0.06 | lasso | 12 | 0.09 | 9.4e-05 | -7.83 | 5.6 | 2.0e-08 | 0.12 | 0.63 | 0.02 | FALSE |
73 | GTEx | Testis | RPS10 | 0.17 | 0.11 | lasso | 1 | 0.04 | 5.2e-03 | 5.50 | 5.5 | 3.7e-08 | -0.08 | 0.30 | 0.03 | FALSE |
74 | GTEx | Testis | MAPK13 | 0.16 | 0.16 | lasso | 2 | 0.16 | 1.1e-07 | -4.58 | 6.8 | 7.8e-12 | 0.11 | 0.86 | 0.01 | FALSE |
75 | GTEx | Thyroid | KCTD20 | 0.13 | 0.02 | lasso | 3 | 0.04 | 7.7e-04 | -4.03 | 5.1 | 2.9e-07 | 0.02 | 0.32 | 0.06 | FALSE |
76 | GTEx | Thyroid | C6orf106 | 0.09 | 0.01 | enet | 29 | 0.01 | 1.1e-01 | 27.44 | 19.8 | 7.6e-87 | -0.10 | 0.10 | 0.03 | FALSE |
77 | GTEx | Thyroid | RPL10A | 0.16 | 0.09 | lasso | 11 | 0.07 | 8.9e-06 | -10.51 | -10.7 | 1.0e-26 | -0.13 | 0.89 | 0.00 | FALSE |
78 | GTEx | Uterus | UHRF1BP1 | 0.20 | 0.03 | lasso | 4 | 0.07 | 1.8e-02 | 4.24 | 12.5 | 6.8e-36 | 0.13 | 0.08 | 0.32 | FALSE |
79 | GTEx | Vagina | UHRF1BP1 | 0.31 | 0.05 | lasso | 8 | 0.04 | 5.0e-02 | 4.24 | 8.0 | 1.1e-15 | 0.12 | 0.09 | 0.51 | FALSE |
80 | GTEx | Whole Blood | ETV7 | 0.09 | 0.01 | lasso | 5 | 0.00 | 2.5e-01 | 4.94 | 5.6 | 2.2e-08 | 0.01 | 0.59 | 0.05 | FALSE |
81 | GTEx | Whole Blood | DEF6 | 0.14 | 0.05 | lasso | 4 | 0.03 | 9.9e-04 | -13.35 | 13.5 | 2.1e-41 | -0.14 | 0.87 | 0.00 | FALSE |
82 | GTEx | Whole Blood | UHRF1BP1 | 0.14 | 0.14 | lasso | 7 | 0.14 | 2.9e-13 | 4.10 | 5.3 | 9.4e-08 | 0.21 | 1.00 | 0.00 | FALSE |
83 | METSIM | Adipose | C6orf106 | 0.04 | 0.02 | blup | 381 | 0.02 | 7.7e-04 | 14.65 | 13.7 | 1.9e-42 | -0.13 | 0.43 | 0.02 | FALSE |
84 | METSIM | Adipose | RPL10A | 0.18 | 0.13 | lasso | 15 | 0.13 | 3.4e-19 | -12.09 | -10.8 | 2.2e-27 | 0.00 | 1.00 | 0.00 | FALSE |
85 | METSIM | Adipose | SRPK1 | 0.06 | 0.01 | blup | 438 | 0.04 | 3.9e-07 | -0.84 | -9.8 | 7.6e-23 | -0.13 | 0.71 | 0.03 | TRUE |
86 | METSIM | Adipose | TAF11 | 0.05 | 0.00 | bslmm | 359 | 0.01 | 2.7e-02 | -10.19 | -7.1 | 1.2e-12 | 0.04 | 0.11 | 0.04 | FALSE |
87 | NTR | Blood | C6orf106 | 0.03 | 0.02 | lasso | 6 | 0.02 | 7.2e-07 | 27.42 | 29.1 | 6.5e-186 | 0.05 | 1.00 | 0.00 | TRUE |
88 | NTR | Blood | ZNF76 | 0.01 | 0.00 | blup | 424 | 0.00 | 3.8e-02 | -11.13 | 15.7 | 2.7e-55 | -0.17 | 0.24 | 0.02 | FALSE |
89 | ROSMAP | Brain Pre-frontal Cortex | DEF6 | 0.04 | 0.02 | bslmm | 421 | 0.02 | 1.8e-03 | -16.47 | 13.6 | 2.1e-42 | -0.18 | 0.80 | 0.02 | FALSE |
90 | ROSMAP | Brain Pre-frontal Cortex | TAF11 | 0.09 | 0.09 | lasso | 8 | 0.10 | 2.4e-12 | -5.83 | -10.4 | 1.5e-25 | 0.08 | 1.00 | 0.00 | FALSE |
91 | ROSMAP | Brain Pre-frontal Cortex | ANKS1A | 0.18 | 0.18 | lasso | 5 | 0.16 | 1.3e-20 | 8.21 | 6.7 | 2.7e-11 | 0.06 | 1.00 | 0.00 | TRUE |
92 | ROSMAP | Brain Pre-frontal Cortex | ZNF76 | 0.04 | 0.00 | blup | 424 | 0.02 | 2.1e-03 | -13.16 | 13.2 | 9.0e-40 | -0.22 | 0.53 | 0.02 | FALSE |
93 | ROSMAP | Brain Pre-frontal Cortex | MAPK14 | 0.08 | 0.06 | lasso | 2 | 0.05 | 4.2e-07 | 5.23 | -5.9 | 4.5e-09 | -0.08 | 0.99 | 0.00 | TRUE |
94 | ROSMAP | Brain Pre-frontal Cortex | PACSIN1 | 0.09 | 0.00 | blup | 359 | 0.02 | 4.5e-04 | 26.78 | 26.0 | 2.0e-149 | 0.27 | 0.18 | 0.07 | FALSE |
95 | ROSMAP | Brain Pre-frontal Cortex | C6orf106 | 0.30 | 0.26 | bslmm | 372 | 0.33 | 9.3e-44 | 27.42 | 27.9 | 7.5e-171 | 0.00 | 1.00 | 0.00 | FALSE |
96 | ROSMAP | Brain Pre-frontal Cortex | RPL10A | 0.30 | 0.18 | bslmm | 409 | 0.19 | 2.6e-24 | -12.26 | -9.2 | 2.9e-20 | 0.12 | 1.00 | 0.00 | FALSE |
97 | YFS | Blood | ANKS1A | 0.04 | 0.00 | bslmm | 451 | 0.02 | 6.8e-07 | -8.75 | 9.7 | 2.9e-22 | 0.12 | 0.82 | 0.00 | TRUE |
98 | YFS | Blood | MAPK14 | 0.12 | 0.10 | enet | 25 | 0.12 | 1.6e-37 | 8.24 | 7.5 | 5.9e-14 | 0.08 | 1.00 | 0.00 | FALSE |
99 | YFS | Blood | RPL10A | 0.24 | 0.11 | lasso | 11 | 0.13 | 4.4e-39 | -12.09 | -8.7 | 2.8e-18 | -0.01 | 1.00 | 0.00 | FALSE |
100 | YFS | Blood | RPS10 | 0.05 | 0.05 | bslmm | 353 | 0.05 | 2.2e-16 | 6.40 | 6.0 | 2.0e-09 | 0.50 | 1.00 | 0.00 | FALSE |
101 | YFS | Blood | SNRPC | 0.02 | 0.03 | lasso | 5 | 0.02 | 3.0e-08 | 8.33 | -8.2 | 1.6e-16 | -0.12 | 1.00 | 0.00 | FALSE |
102 | YFS | Blood | UHRF1BP1 | 0.18 | 0.34 | enet | 36 | 0.34 | 2.5e-117 | 4.15 | 5.7 | 1.3e-08 | 0.13 | 1.00 | 0.00 | FALSE |
103 | YFS | Blood | ZNF76 | 0.05 | 0.08 | lasso | 4 | 0.07 | 6.7e-23 | -13.24 | 12.9 | 3.0e-38 | -0.17 | 1.00 | 0.00 | FALSE |
104 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | RPL10A | 0.03 | 0.00 | blup | 54 | 0.02 | 6.0e-03 | -16.66 | -16.0 | 8.2e-58 | 0.03 | 0.01 | 0.85 | FALSE |
105 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MAPK13 | 0.02 | 0.02 | lasso | 2 | 0.01 | 1.1e-03 | 9.86 | 10.0 | 1.5e-23 | 0.09 | 0.13 | 0.02 | TRUE |
106 | The Cancer Genome Atlas | Breast Invasive Carcinoma | RPL10A | 0.03 | 0.00 | blup | 55 | 0.01 | 1.4e-03 | -12.09 | -10.0 | 1.2e-23 | 0.02 | 0.05 | 0.08 | FALSE |
107 | The Cancer Genome Atlas | Breast Invasive Carcinoma | RPS10 | 0.01 | 0.01 | enet | 1 | 0.01 | 1.2e-02 | 6.40 | 6.4 | 1.6e-10 | 0.48 | 0.15 | 0.20 | FALSE |
108 | The Cancer Genome Atlas | Breast Invasive Carcinoma | TCP11 | 0.03 | 0.03 | blup | 49 | 0.04 | 6.6e-08 | -6.84 | -14.1 | 3.3e-45 | 0.07 | 1.00 | 0.00 | FALSE |
109 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | MAPK13 | 0.10 | 0.02 | blup | 43 | 0.04 | 5.7e-03 | -4.44 | 6.0 | 2.1e-09 | 0.10 | 0.17 | 0.04 | FALSE |
110 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | TCP11 | 0.07 | 0.01 | enet | 8 | 0.01 | 8.2e-02 | -13.68 | -13.8 | 3.7e-43 | -0.02 | 0.09 | 0.04 | FALSE |
111 | The Cancer Genome Atlas | Colon Adenocarcinoma | MAPK13 | 0.12 | 0.07 | blup | 43 | 0.09 | 8.5e-06 | -4.86 | 6.0 | 1.4e-09 | 0.11 | 0.73 | 0.02 | FALSE |
112 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C6orf106 | 0.09 | 0.03 | lasso | 5 | 0.05 | 3.6e-06 | -8.93 | 16.0 | 1.9e-57 | -0.03 | 0.31 | 0.06 | FALSE |
113 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | TCP11 | 0.03 | 0.00 | blup | 49 | 0.01 | 8.8e-03 | -13.11 | -14.8 | 1.1e-49 | 0.02 | 0.10 | 0.02 | FALSE |
114 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C6orf106 | 0.04 | 0.01 | blup | 68 | 0.01 | 2.4e-02 | 27.33 | 25.8 | 7.3e-147 | 0.08 | 0.01 | 0.71 | FALSE |
115 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | RPL10A | 0.07 | 0.07 | lasso | 2 | 0.06 | 9.9e-08 | -12.26 | -12.9 | 4.6e-38 | -0.04 | 1.00 | 0.00 | FALSE |
116 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TCP11 | 0.03 | 0.02 | blup | 49 | 0.02 | 1.7e-03 | -5.24 | -12.6 | 1.3e-36 | 0.07 | 0.40 | 0.02 | FALSE |
117 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PPARD | 0.07 | 0.06 | lasso | 3 | 0.04 | 2.5e-03 | -16.29 | -15.0 | 3.8e-51 | 0.17 | 0.13 | 0.35 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | UHRF1BP1 | 0.08 | 0.09 | blup | 71 | 0.10 | 2.0e-06 | 4.08 | 6.3 | 3.1e-10 | 0.17 | 0.70 | 0.28 | TRUE |
119 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C6orf106 | 0.04 | 0.05 | lasso | 4 | 0.03 | 8.1e-05 | 27.38 | 26.8 | 3.0e-158 | 0.09 | 0.01 | 0.99 | FALSE |
120 | The Cancer Genome Atlas | Brain Lower Grade Glioma | DEF6 | 0.04 | 0.01 | blup | 50 | 0.03 | 6.2e-04 | -13.41 | 6.2 | 4.3e-10 | -0.21 | 0.20 | 0.02 | TRUE |
121 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TCP11 | 0.05 | 0.04 | blup | 49 | 0.06 | 1.3e-07 | -13.11 | -11.6 | 3.4e-31 | 0.05 | 0.98 | 0.00 | FALSE |
122 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | TCP11 | 0.22 | 0.16 | enet | 8 | 0.15 | 1.9e-07 | 5.83 | 6.1 | 1.1e-09 | -0.04 | 1.00 | 0.00 | FALSE |
123 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | ZNF76 | 0.08 | 0.05 | lasso | 10 | 0.07 | 4.9e-04 | -18.03 | -14.0 | 1.1e-44 | 0.06 | 0.05 | 0.35 | FALSE |
124 | The Cancer Genome Atlas | Lung Adenocarcinoma | C6orf106 | 0.03 | 0.03 | lasso | 3 | 0.01 | 7.6e-03 | 14.65 | 19.6 | 1.7e-85 | 0.00 | 0.01 | 0.90 | FALSE |
125 | The Cancer Genome Atlas | Lung Adenocarcinoma | C6orf126 | 0.03 | 0.00 | enet | 8 | 0.01 | 1.8e-02 | 4.09 | 5.3 | 1.2e-07 | 0.04 | 0.02 | 0.03 | TRUE |
126 | The Cancer Genome Atlas | Lung Adenocarcinoma | C6orf81 | 0.05 | 0.00 | blup | 43 | 0.02 | 8.9e-04 | 11.29 | -10.6 | 3.1e-26 | 0.03 | 0.03 | 0.03 | FALSE |
127 | The Cancer Genome Atlas | Lung Adenocarcinoma | MAPK13 | 0.02 | 0.02 | enet | 7 | 0.01 | 9.7e-03 | -4.93 | 6.0 | 1.6e-09 | 0.09 | 0.10 | 0.03 | FALSE |
128 | The Cancer Genome Atlas | Lung Adenocarcinoma | RPL10A | 0.02 | 0.02 | lasso | 2 | 0.02 | 3.8e-03 | -13.36 | -13.3 | 1.3e-40 | -0.01 | 0.08 | 0.04 | FALSE |
129 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | TCP11 | 0.03 | 0.03 | blup | 49 | 0.03 | 3.5e-04 | -13.08 | -13.6 | 6.5e-42 | 0.05 | 0.39 | 0.02 | FALSE |
130 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | C6orf106 | 0.14 | 0.07 | enet | 6 | 0.06 | 1.0e-04 | 27.42 | 27.6 | 2.9e-167 | 0.08 | 0.01 | 0.98 | FALSE |
131 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | C6orf127 | 0.22 | 0.13 | blup | 43 | 0.12 | 1.6e-08 | 5.92 | -6.1 | 8.3e-10 | -0.04 | 0.99 | 0.00 | FALSE |
132 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | CLPS | 0.26 | 0.08 | enet | 14 | 0.10 | 4.9e-07 | 5.92 | -11.3 | 1.1e-29 | -0.02 | 0.59 | 0.03 | TRUE |
133 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | TCP11 | 0.05 | 0.07 | lasso | 2 | 0.07 | 1.9e-05 | -13.09 | -13.2 | 1.3e-39 | 0.01 | 0.51 | 0.02 | FALSE |
134 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | TCP11 | 0.08 | 0.11 | lasso | 2 | 0.11 | 3.4e-05 | -13.09 | -13.1 | 2.7e-39 | 0.01 | 0.26 | 0.03 | FALSE |
135 | The Cancer Genome Atlas | Prostate Adenocarcinoma | RPL10A | 0.09 | 0.03 | enet | 19 | 0.07 | 1.1e-07 | -12.09 | -17.4 | 5.6e-68 | 0.01 | 0.94 | 0.02 | FALSE |
136 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TAF11 | 0.11 | 0.04 | enet | 14 | 0.06 | 8.1e-07 | -9.91 | -10.8 | 2.6e-27 | 0.10 | 0.12 | 0.02 | FALSE |
137 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TCP11 | 0.03 | 0.03 | lasso | 3 | 0.04 | 3.8e-05 | -6.84 | -6.9 | 6.3e-12 | 0.13 | 0.28 | 0.02 | FALSE |
138 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ZNF76 | 0.03 | 0.02 | lasso | 3 | 0.02 | 3.5e-03 | -13.57 | 12.5 | 7.3e-36 | -0.06 | 0.31 | 0.02 | FALSE |
139 | The Cancer Genome Atlas | Thyroid Carcinoma | C6orf106 | 0.08 | 0.00 | enet | 15 | 0.05 | 2.5e-05 | -10.48 | 28.1 | 2.6e-173 | -0.05 | 0.03 | 0.28 | FALSE |
140 | The Cancer Genome Atlas | Thyroid Carcinoma | MAPK13 | 0.07 | 0.06 | lasso | 6 | 0.06 | 1.5e-06 | -4.93 | 8.2 | 1.8e-16 | 0.12 | 0.84 | 0.01 | FALSE |
141 | The Cancer Genome Atlas | Thyroid Carcinoma | RPL10A | 0.05 | 0.07 | enet | 4 | 0.04 | 1.2e-04 | -12.09 | -13.9 | 8.3e-44 | -0.03 | 0.76 | 0.05 | FALSE |
142 | The Cancer Genome Atlas | Thyroid Carcinoma | SCUBE3 | 0.03 | 0.01 | blup | 62 | 0.03 | 8.9e-04 | -18.03 | 10.1 | 5.2e-24 | -0.10 | 0.14 | 0.04 | TRUE |
143 | The Cancer Genome Atlas | Thyroid Carcinoma | SNRPC | 0.05 | 0.05 | blup | 31 | 0.05 | 2.9e-05 | 4.07 | -7.2 | 8.2e-13 | -0.13 | 0.76 | 0.15 | FALSE |
144 | The Cancer Genome Atlas | Thyroid Carcinoma | TAF11 | 0.10 | 0.05 | lasso | 4 | 0.05 | 1.1e-05 | -9.91 | -11.3 | 9.4e-30 | 0.13 | 0.27 | 0.06 | FALSE |
145 | The Cancer Genome Atlas | Thyroid Carcinoma | TCP11 | 0.03 | 0.02 | blup | 49 | 0.02 | 1.6e-03 | -13.09 | -13.3 | 4.3e-40 | 0.04 | 0.08 | 0.03 | FALSE |