Best TWAS P=2.57e-24 · Best GWAS P=1.16e-25 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | DENND1A | 0.06 | 0.02 | blup | 613 | 0.04 | 2.6e-05 | 1.13 | 6.2 | 6.8e-10 | 0.00 | 0.81 | 0.01 | TRUE |
2 | CommonMind | Brain Pre-frontal Cortex | LOC253039 | 0.76 | 0.77 | lasso | 5 | 0.78 | 2.3e-152 | 9.45 | 9.2 | 3.3e-20 | 0.68 | 0.99 | 0.01 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | PSMD5 | 0.23 | 0.22 | lasso | 7 | 0.23 | 2.4e-27 | 8.92 | 9.2 | 4.0e-20 | 0.69 | 0.99 | 0.01 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | PTRH1 | 0.14 | 0.06 | blup | 372 | 0.08 | 2.1e-10 | -1.56 | -5.8 | 6.3e-09 | 0.03 | 1.00 | 0.00 | TRUE |
5 | CommonMind | Brain Pre-frontal Cortex | RABGAP1 | 0.09 | 0.07 | enet | 20 | 0.08 | 3.8e-10 | 7.67 | -7.0 | 3.3e-12 | 0.00 | 0.18 | 0.82 | FALSE |
6 | CommonMind | Brain Pre-frontal Cortex | RALGPS1 | 0.08 | 0.07 | enet | 27 | 0.09 | 3.8e-11 | 4.80 | 6.9 | 5.8e-12 | 0.01 | 0.92 | 0.08 | FALSE |
7 | GTEx | Adipose Subcutaneous | MEGF9 | 0.19 | 0.18 | lasso | 6 | 0.18 | 6.7e-15 | 10.26 | 10.1 | 4.4e-24 | 0.99 | 0.01 | 0.99 | FALSE |
8 | GTEx | Adipose Subcutaneous | PBX3 | 0.17 | 0.08 | lasso | 6 | 0.10 | 2.4e-08 | 6.63 | 6.6 | 5.5e-11 | -0.04 | 0.99 | 0.00 | FALSE |
9 | GTEx | Adipose Subcutaneous | PSMD5-AS1 | 0.84 | 0.65 | enet | 24 | 0.72 | 1.1e-84 | 9.45 | 8.2 | 1.6e-16 | 0.62 | 0.98 | 0.02 | FALSE |
10 | GTEx | Adipose Visceral Omentum | MEGF9 | 0.10 | 0.08 | enet | 8 | 0.07 | 1.6e-04 | 10.26 | 9.7 | 3.1e-22 | 0.97 | 0.01 | 0.98 | FALSE |
11 | GTEx | Adipose Visceral Omentum | PSMD5-AS1 | 0.61 | 0.49 | enet | 21 | 0.56 | 1.5e-34 | 9.45 | 7.8 | 5.8e-15 | 0.58 | 0.98 | 0.02 | FALSE |
12 | GTEx | Adrenal Gland | PSMD5 | 0.40 | 0.22 | enet | 37 | 0.23 | 7.2e-09 | 9.45 | 6.5 | 5.6e-11 | 0.60 | 0.47 | 0.52 | FALSE |
13 | GTEx | Adrenal Gland | PSMD5-AS1 | 0.63 | 0.49 | enet | 27 | 0.55 | 4.6e-23 | 9.45 | 7.9 | 3.1e-15 | 0.57 | 0.98 | 0.02 | FALSE |
14 | GTEx | Artery Aorta | GGTA1P | 0.15 | 0.10 | enet | 12 | 0.12 | 2.3e-07 | -7.48 | -7.5 | 7.7e-14 | 0.04 | 0.30 | 0.70 | FALSE |
15 | GTEx | Artery Aorta | PSMD5-AS1 | 0.68 | 0.58 | enet | 24 | 0.65 | 7.3e-47 | 9.45 | 7.8 | 6.0e-15 | 0.61 | 0.98 | 0.02 | FALSE |
16 | GTEx | Artery Coronary | RALGPS1 | 0.26 | 0.00 | enet | 26 | 0.07 | 2.9e-03 | -9.40 | -5.3 | 1.2e-07 | -0.02 | 0.09 | 0.27 | FALSE |
17 | GTEx | Artery Coronary | PSMD5-AS1 | 0.56 | 0.50 | enet | 31 | 0.55 | 1.3e-21 | 9.45 | 7.4 | 1.7e-13 | 0.58 | 0.98 | 0.02 | FALSE |
18 | GTEx | Artery Tibial | PSMD5 | 0.04 | 0.05 | lasso | 3 | 0.03 | 1.2e-03 | 9.48 | 8.4 | 6.3e-17 | 0.65 | 0.22 | 0.46 | FALSE |
19 | GTEx | Artery Tibial | PBX3 | 0.11 | 0.07 | lasso | 2 | 0.06 | 8.1e-06 | 5.51 | 6.5 | 1.1e-10 | -0.02 | 0.63 | 0.03 | FALSE |
20 | GTEx | Artery Tibial | PSMD5-AS1 | 0.78 | 0.68 | lasso | 7 | 0.73 | 4.1e-82 | 9.45 | 8.7 | 3.5e-18 | 0.64 | 0.98 | 0.02 | FALSE |
21 | GTEx | Brain Caudate basal ganglia | PSMD5-AS1 | 0.69 | 0.59 | lasso | 8 | 0.58 | 3.1e-20 | 9.45 | 8.8 | 1.7e-18 | 0.63 | 0.98 | 0.02 | FALSE |
22 | GTEx | Brain Cerebellar Hemisphere | PSMD5-AS1 | 0.63 | 0.56 | lasso | 7 | 0.52 | 1.2e-15 | 9.48 | 8.9 | 4.6e-19 | 0.65 | 0.97 | 0.03 | FALSE |
23 | GTEx | Brain Cerebellum | RALGPS1 | 0.28 | 0.17 | lasso | 7 | 0.19 | 2.8e-06 | 6.01 | 6.3 | 2.5e-10 | 0.02 | 0.90 | 0.02 | FALSE |
24 | GTEx | Brain Cerebellum | PSMD5-AS1 | 0.82 | 0.67 | lasso | 13 | 0.69 | 1.4e-27 | 9.45 | 9.3 | 1.7e-20 | 0.69 | 0.98 | 0.02 | FALSE |
25 | GTEx | Brain Cortex | PSMD5-AS1 | 0.67 | 0.45 | enet | 26 | 0.46 | 3.4e-14 | 9.48 | 8.9 | 7.7e-19 | 0.63 | 0.86 | 0.14 | FALSE |
26 | GTEx | Brain Frontal Cortex BA9 | PSMD5-AS1 | 0.77 | 0.59 | enet | 25 | 0.55 | 2.2e-17 | 9.45 | 8.9 | 3.5e-19 | 0.63 | 0.97 | 0.03 | FALSE |
27 | GTEx | Brain Hippocampus | PSMD5-AS1 | 0.61 | 0.40 | lasso | 6 | 0.53 | 1.4e-14 | 9.48 | 7.3 | 2.6e-13 | 0.49 | 0.96 | 0.03 | FALSE |
28 | GTEx | Brain Hypothalamus | PSMD5-AS1 | 0.76 | 0.60 | enet | 43 | 0.55 | 3.5e-15 | 9.45 | 8.7 | 4.5e-18 | 0.60 | 0.94 | 0.06 | FALSE |
29 | GTEx | Brain Nucleus accumbens basal ganglia | PSMD5-AS1 | 0.69 | 0.50 | enet | 20 | 0.61 | 3.5e-20 | 9.48 | 8.6 | 1.1e-17 | 0.57 | 0.98 | 0.02 | FALSE |
30 | GTEx | Brain Putamen basal ganglia | PSMD5-AS1 | 0.58 | 0.48 | enet | 19 | 0.46 | 1.5e-12 | 9.45 | 8.8 | 1.5e-18 | 0.63 | 0.88 | 0.11 | FALSE |
31 | GTEx | Breast Mammary Tissue | MEGF9 | 0.10 | 0.04 | enet | 15 | 0.05 | 9.1e-04 | 10.26 | 7.6 | 4.1e-14 | 0.82 | 0.02 | 0.98 | FALSE |
32 | GTEx | Breast Mammary Tissue | PSMD5-AS1 | 0.65 | 0.52 | enet | 9 | 0.49 | 1.7e-28 | 9.45 | 8.6 | 5.9e-18 | 0.62 | 0.98 | 0.02 | FALSE |
33 | GTEx | Breast Mammary Tissue (Male) | PSMD5-AS1 | 0.50 | 0.28 | enet | 21 | 0.46 | 4.2e-12 | 9.45 | 7.8 | 7.5e-15 | 0.51 | 0.76 | 0.13 | FALSE |
34 | GTEx | Breast Mammary Tissue (Female) | MEGF9 | 0.02 | 0.09 | lasso | 1 | 0.03 | 3.5e-02 | 7.84 | 7.8 | 4.4e-15 | 0.13 | 0.03 | 0.16 | TRUE |
35 | GTEx | Breast Mammary Tissue (Female) | PSMD5-AS1 | 0.44 | 0.42 | lasso | 6 | 0.39 | 1.1e-12 | 9.45 | 8.8 | 1.0e-18 | 0.65 | 0.97 | 0.03 | FALSE |
36 | GTEx | Cells EBV-transformed lymphocytes | PSMD5-AS1 | 0.58 | 0.44 | enet | 18 | 0.47 | 2.3e-17 | 9.48 | 8.6 | 1.2e-17 | 0.62 | 0.98 | 0.02 | FALSE |
37 | GTEx | Cells Transformed fibroblasts | PSMD5 | 0.25 | 0.18 | enet | 27 | 0.18 | 7.2e-14 | 9.48 | 7.2 | 6.4e-13 | 0.65 | 0.97 | 0.03 | FALSE |
38 | GTEx | Cells Transformed fibroblasts | FBXW2 | 0.18 | 0.13 | lasso | 5 | 0.13 | 6.1e-10 | 3.00 | 6.2 | 5.9e-10 | 0.49 | 0.99 | 0.01 | FALSE |
39 | GTEx | Cells Transformed fibroblasts | MAPKAP1 | 0.04 | 0.03 | lasso | 3 | 0.02 | 6.5e-03 | -6.16 | -7.8 | 5.6e-15 | 0.00 | 0.35 | 0.38 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | PBX3 | 0.05 | 0.02 | enet | 7 | 0.00 | 1.4e-01 | -7.15 | 8.0 | 1.4e-15 | 0.00 | 0.09 | 0.77 | TRUE |
41 | GTEx | Cells Transformed fibroblasts | PSMD5-AS1 | 0.42 | 0.13 | lasso | 11 | 0.18 | 7.5e-14 | 9.48 | 6.9 | 5.5e-12 | 0.53 | 0.99 | 0.01 | FALSE |
42 | GTEx | Colon Sigmoid | PBX3 | 0.23 | 0.22 | lasso | 3 | 0.16 | 1.9e-06 | 5.54 | 5.3 | 1.4e-07 | -0.02 | 0.92 | 0.02 | FALSE |
43 | GTEx | Colon Sigmoid | PSMD5-AS1 | 0.82 | 0.67 | lasso | 10 | 0.79 | 2.8e-43 | 9.48 | 8.3 | 1.5e-16 | 0.57 | 0.98 | 0.02 | FALSE |
44 | GTEx | Colon Transverse | PSMD5-AS1 | 0.69 | 0.55 | enet | 10 | 0.56 | 5.9e-32 | 9.45 | 8.7 | 3.0e-18 | 0.63 | 0.98 | 0.02 | FALSE |
45 | GTEx | Esophagus Gastroesophageal Junction | PBX3 | 0.21 | 0.19 | lasso | 5 | 0.14 | 1.0e-05 | 5.76 | 5.8 | 5.5e-09 | -0.05 | 0.54 | 0.34 | FALSE |
46 | GTEx | Esophagus Gastroesophageal Junction | PSMD5-AS1 | 0.79 | 0.58 | lasso | 13 | 0.64 | 1.9e-29 | 9.45 | 8.7 | 4.7e-18 | 0.61 | 0.98 | 0.02 | FALSE |
47 | GTEx | Esophagus Mucosa | TRAF1 | 0.08 | 0.00 | lasso | 4 | 0.01 | 8.5e-02 | 3.96 | 6.1 | 1.3e-09 | 0.24 | 0.32 | 0.10 | FALSE |
48 | GTEx | Esophagus Mucosa | PSMD5 | 0.12 | 0.08 | enet | 6 | 0.08 | 4.3e-06 | 8.92 | 8.3 | 1.0e-16 | 0.58 | 0.76 | 0.23 | FALSE |
49 | GTEx | Esophagus Mucosa | RALGPS1 | 0.05 | 0.01 | lasso | 6 | 0.02 | 2.7e-02 | -9.44 | -8.8 | 1.1e-18 | 0.01 | 0.17 | 0.57 | FALSE |
50 | GTEx | Esophagus Mucosa | GGTA1P | 0.11 | 0.11 | lasso | 8 | 0.12 | 3.4e-08 | -7.67 | 7.3 | 3.8e-13 | -0.03 | 0.25 | 0.75 | FALSE |
51 | GTEx | Esophagus Mucosa | PSMD5-AS1 | 0.66 | 0.53 | lasso | 17 | 0.60 | 8.5e-49 | 9.45 | 8.2 | 3.1e-16 | 0.59 | 0.98 | 0.02 | FALSE |
52 | GTEx | Esophagus Muscularis | RABGAP1 | 0.10 | 0.01 | lasso | 5 | 0.03 | 3.7e-03 | 7.66 | -5.3 | 9.7e-08 | 0.02 | 0.13 | 0.70 | FALSE |
53 | GTEx | Esophagus Muscularis | PHF19 | 0.16 | 0.06 | lasso | 8 | 0.07 | 3.1e-05 | 4.40 | -8.2 | 1.6e-16 | -0.67 | 0.25 | 0.67 | FALSE |
54 | GTEx | Esophagus Muscularis | CDK5RAP2 | 0.10 | 0.02 | lasso | 6 | 0.04 | 2.9e-03 | 0.94 | -5.3 | 1.1e-07 | -0.64 | 0.03 | 0.85 | FALSE |
55 | GTEx | Esophagus Muscularis | RABEPK | 0.12 | 0.01 | enet | 19 | 0.08 | 1.3e-05 | -5.43 | -6.0 | 2.3e-09 | 0.03 | 0.28 | 0.17 | FALSE |
56 | GTEx | Esophagus Muscularis | PBX3 | 0.12 | 0.08 | lasso | 7 | 0.09 | 4.2e-06 | 5.51 | 7.5 | 7.3e-14 | -0.02 | 0.90 | 0.08 | FALSE |
57 | GTEx | Esophagus Muscularis | PSMD5-AS1 | 0.77 | 0.63 | enet | 30 | 0.70 | 1.5e-58 | 9.48 | 8.4 | 3.5e-17 | 0.63 | 0.98 | 0.02 | FALSE |
58 | GTEx | Heart Atrial Appendage | PSMD5 | 0.14 | 0.02 | enet | 23 | 0.02 | 3.6e-02 | 9.48 | 9.2 | 3.5e-20 | 0.51 | 0.07 | 0.54 | FALSE |
59 | GTEx | Heart Atrial Appendage | PBX3 | 0.10 | 0.08 | lasso | 6 | 0.04 | 9.0e-03 | 5.54 | 6.3 | 3.2e-10 | -0.02 | 0.29 | 0.10 | FALSE |
60 | GTEx | Heart Atrial Appendage | GGTA1P | 0.31 | 0.40 | enet | 13 | 0.43 | 4.3e-21 | -7.36 | -7.4 | 1.8e-13 | 0.04 | 0.71 | 0.29 | FALSE |
61 | GTEx | Heart Atrial Appendage | RP11-27I1.4 | 0.09 | 0.09 | lasso | 5 | 0.06 | 1.1e-03 | 9.49 | 9.9 | 3.3e-23 | 0.90 | 0.02 | 0.92 | FALSE |
62 | GTEx | Heart Atrial Appendage | PSMD5-AS1 | 0.65 | 0.51 | enet | 35 | 0.55 | 9.6e-29 | 9.48 | 8.8 | 1.2e-18 | 0.65 | 0.98 | 0.02 | FALSE |
63 | GTEx | Heart Left Ventricle | PBX3 | 0.21 | 0.22 | lasso | 4 | 0.21 | 3.3e-11 | 6.33 | 6.4 | 1.8e-10 | -0.03 | 1.00 | 0.00 | FALSE |
64 | GTEx | Heart Left Ventricle | OLFML2A | 0.17 | 0.16 | lasso | 1 | 0.15 | 3.1e-08 | -5.91 | 5.9 | 3.5e-09 | -0.03 | 0.00 | 1.00 | TRUE |
65 | GTEx | Heart Left Ventricle | GGTA1P | 0.30 | 0.43 | lasso | 13 | 0.44 | 2.1e-25 | -7.65 | -7.5 | 4.7e-14 | 0.04 | 0.34 | 0.66 | FALSE |
66 | GTEx | Heart Left Ventricle | PSMD5-AS1 | 0.57 | 0.51 | lasso | 10 | 0.52 | 1.4e-31 | 9.45 | 8.9 | 5.5e-19 | 0.65 | 0.98 | 0.02 | FALSE |
67 | GTEx | Liver | PSMD5 | 0.30 | 0.22 | enet | 18 | 0.24 | 2.1e-07 | 8.92 | 9.6 | 9.5e-22 | 0.73 | 0.05 | 0.95 | FALSE |
68 | GTEx | Liver | PSMD5-AS1 | 0.62 | 0.35 | lasso | 5 | 0.49 | 1.2e-15 | 5.02 | 8.0 | 9.9e-16 | 0.55 | 0.92 | 0.08 | FALSE |
69 | GTEx | Lung | PSMD5-AS1 | 0.75 | 0.50 | enet | 27 | 0.61 | 2.0e-58 | 9.45 | 8.0 | 1.4e-15 | 0.59 | 0.98 | 0.02 | FALSE |
70 | GTEx | Muscle Skeletal | PSMD5 | 0.31 | 0.31 | enet | 20 | 0.34 | 6.0e-34 | 9.45 | 8.4 | 4.2e-17 | 0.69 | 0.98 | 0.02 | FALSE |
71 | GTEx | Muscle Skeletal | GGTA1P | 0.13 | 0.16 | lasso | 5 | 0.16 | 1.3e-15 | -7.64 | -7.6 | 2.6e-14 | 0.03 | 0.40 | 0.60 | FALSE |
72 | GTEx | Muscle Skeletal | PSMD5-AS1 | 0.73 | 0.56 | enet | 16 | 0.61 | 1.6e-74 | 9.48 | 8.7 | 4.9e-18 | 0.63 | 0.98 | 0.02 | FALSE |
73 | GTEx | Nerve Tibial | PHF19 | 0.07 | 0.03 | lasso | 4 | 0.02 | 1.3e-02 | 4.43 | -5.9 | 4.2e-09 | -0.29 | 0.18 | 0.03 | FALSE |
74 | GTEx | Nerve Tibial | PBX3 | 0.08 | 0.03 | enet | 21 | 0.03 | 2.3e-03 | 6.63 | 6.0 | 1.9e-09 | -0.05 | 0.27 | 0.26 | FALSE |
75 | GTEx | Nerve Tibial | PSMD5-AS1 | 0.84 | 0.66 | enet | 42 | 0.72 | 1.1e-72 | 9.45 | 9.0 | 1.9e-19 | 0.67 | 0.98 | 0.02 | FALSE |
76 | GTEx | Ovary | PSMD5-AS1 | 0.65 | 0.46 | enet | 10 | 0.51 | 1.2e-14 | 9.48 | 8.8 | 8.5e-19 | 0.65 | 0.79 | 0.20 | FALSE |
77 | GTEx | Pancreas | PSMD5 | 0.12 | 0.12 | enet | 6 | 0.05 | 3.0e-03 | 9.48 | 8.8 | 1.4e-18 | 0.69 | 0.18 | 0.38 | FALSE |
78 | GTEx | Pancreas | PSMD5-AS1 | 0.65 | 0.55 | enet | 23 | 0.59 | 2.3e-30 | 9.45 | 8.5 | 1.5e-17 | 0.64 | 0.98 | 0.02 | FALSE |
79 | GTEx | Pituitary | PSMD5-AS1 | 0.74 | 0.38 | enet | 37 | 0.45 | 1.3e-12 | 9.45 | 5.8 | 7.2e-09 | 0.55 | 0.93 | 0.06 | FALSE |
80 | GTEx | Prostate | PSMD5-AS1 | 0.63 | 0.33 | lasso | 9 | 0.47 | 2.2e-13 | 9.48 | 6.8 | 1.5e-11 | 0.54 | 0.96 | 0.04 | FALSE |
81 | GTEx | Prostate | RP11-244O19.1 | 0.36 | 0.09 | enet | 38 | 0.20 | 1.1e-05 | 3.00 | 5.7 | 1.5e-08 | 0.00 | 0.11 | 0.26 | FALSE |
82 | GTEx | Skin Not Sun Exposed Suprapubic | PBX3 | 0.12 | 0.13 | lasso | 2 | 0.13 | 1.8e-07 | 5.51 | 6.1 | 1.3e-09 | -0.02 | 0.95 | 0.02 | FALSE |
83 | GTEx | Skin Not Sun Exposed Suprapubic | PSMD5-AS1 | 0.56 | 0.48 | lasso | 14 | 0.50 | 1.8e-31 | 9.45 | 9.0 | 2.0e-19 | 0.71 | 0.98 | 0.02 | FALSE |
84 | GTEx | Skin Not Sun Exposed Suprapubic | PRPS1P2 | 0.09 | 0.01 | lasso | 5 | 0.02 | 4.6e-02 | -5.43 | 5.2 | 1.7e-07 | 0.02 | 0.25 | 0.05 | FALSE |
85 | GTEx | Skin Sun Exposed Lower leg | RABGAP1 | 0.05 | 0.01 | lasso | 4 | 0.02 | 4.1e-03 | 6.48 | 8.3 | 6.6e-17 | -0.01 | 0.09 | 0.76 | FALSE |
86 | GTEx | Skin Sun Exposed Lower leg | PSMD5 | 0.04 | 0.04 | lasso | 6 | 0.03 | 3.1e-03 | 10.26 | 8.9 | 4.5e-19 | 0.93 | 0.03 | 0.95 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | MEGF9 | 0.11 | 0.10 | lasso | 5 | 0.12 | 2.7e-10 | 10.11 | 10.2 | 2.6e-24 | 0.99 | 0.01 | 0.99 | TRUE |
88 | GTEx | Skin Sun Exposed Lower leg | RALGPS1 | 0.06 | 0.02 | lasso | 6 | 0.01 | 2.5e-02 | -9.44 | -9.4 | 6.1e-21 | 0.01 | 0.13 | 0.81 | TRUE |
89 | GTEx | Skin Sun Exposed Lower leg | PSMD5-AS1 | 0.73 | 0.68 | lasso | 10 | 0.70 | 3.1e-81 | 9.45 | 8.8 | 1.1e-18 | 0.66 | 0.98 | 0.02 | FALSE |
90 | GTEx | Small Intestine Terminal Ileum | PSMD5-AS1 | 0.49 | 0.48 | enet | 14 | 0.41 | 2.5e-10 | 9.48 | 7.8 | 8.2e-15 | 0.65 | 0.90 | 0.08 | FALSE |
91 | GTEx | Spleen | MAPKAP1 | 0.30 | 0.12 | lasso | 6 | 0.04 | 2.7e-02 | -6.58 | -7.0 | 3.2e-12 | -0.01 | 0.11 | 0.58 | FALSE |
92 | GTEx | Spleen | DAB2IP | 0.25 | -0.01 | enet | 34 | 0.00 | 3.8e-01 | -7.64 | -5.5 | 3.5e-08 | -0.02 | 0.05 | 0.48 | FALSE |
93 | GTEx | Spleen | PSMD5-AS1 | 0.74 | 0.47 | enet | 42 | 0.57 | 8.5e-18 | 9.45 | 8.7 | 3.0e-18 | 0.52 | 0.96 | 0.03 | FALSE |
94 | GTEx | Stomach | PSMD5-AS1 | 0.75 | 0.48 | lasso | 8 | 0.50 | 2.7e-27 | 9.45 | 8.8 | 1.3e-18 | 0.67 | 0.98 | 0.02 | FALSE |
95 | GTEx | Testis | RABGAP1 | 0.13 | 0.04 | enet | 20 | 0.03 | 1.9e-02 | 8.77 | 7.9 | 3.2e-15 | -0.01 | 0.07 | 0.85 | FALSE |
96 | GTEx | Testis | RALGPS1 | 0.23 | 0.32 | lasso | 9 | 0.29 | 2.7e-13 | -7.70 | -7.6 | 4.1e-14 | -0.01 | 1.00 | 0.00 | FALSE |
97 | GTEx | Testis | PBX3 | 0.19 | 0.22 | lasso | 3 | 0.20 | 4.7e-09 | 6.02 | 6.4 | 1.8e-10 | -0.03 | 0.96 | 0.02 | FALSE |
98 | GTEx | Thyroid | PSMD5 | 0.22 | 0.18 | enet | 23 | 0.20 | 1.5e-15 | 9.48 | 7.5 | 7.4e-14 | 0.65 | 0.97 | 0.03 | FALSE |
99 | GTEx | Thyroid | RALGPS1 | 0.09 | 0.04 | enet | 12 | 0.01 | 2.7e-02 | -9.36 | 7.5 | 7.0e-14 | 0.01 | 0.12 | 0.83 | FALSE |
100 | GTEx | Thyroid | DAB2IP | 0.20 | 0.04 | lasso | 8 | 0.09 | 2.4e-07 | 7.07 | -6.0 | 1.8e-09 | 0.05 | 0.71 | 0.05 | TRUE |
101 | GTEx | Thyroid | PSMD5-AS1 | 0.77 | 0.61 | enet | 33 | 0.66 | 3.7e-67 | 9.48 | 8.1 | 5.4e-16 | 0.65 | 0.98 | 0.02 | FALSE |
102 | GTEx | Uterus | PSMD5-AS1 | 0.80 | 0.22 | enet | 23 | 0.20 | 6.5e-05 | 9.45 | 9.8 | 7.0e-23 | 0.70 | 0.18 | 0.64 | FALSE |
103 | GTEx | Vagina | PSMD5-AS1 | 0.55 | 0.34 | lasso | 5 | 0.42 | 1.2e-10 | 4.19 | 6.7 | 1.8e-11 | 0.41 | 0.78 | 0.10 | FALSE |
104 | GTEx | Whole Blood | RALGPS1 | 0.10 | 0.10 | enet | 10 | 0.08 | 1.2e-07 | 6.55 | -6.3 | 3.4e-10 | -0.03 | 1.00 | 0.00 | FALSE |
105 | GTEx | Whole Blood | GGTA1P | 0.14 | 0.14 | lasso | 7 | 0.13 | 1.1e-11 | -7.65 | 7.8 | 7.4e-15 | -0.03 | 0.25 | 0.75 | TRUE |
106 | GTEx | Whole Blood | PSMD5-AS1 | 0.55 | 0.36 | lasso | 8 | 0.37 | 5.3e-36 | 9.45 | 8.5 | 2.6e-17 | 0.60 | 0.98 | 0.02 | FALSE |
107 | METSIM | Adipose | MEGF9 | 0.14 | 0.18 | bslmm | 372 | 0.19 | 4.7e-27 | 9.80 | 10.0 | 1.9e-23 | 0.97 | 0.02 | 0.98 | FALSE |
108 | METSIM | Adipose | PHF19 | 0.07 | 0.01 | bslmm | 374 | 0.01 | 2.3e-02 | 9.48 | -9.6 | 6.9e-22 | -0.67 | 0.04 | 0.93 | FALSE |
109 | METSIM | Adipose | PSMD5 | 0.04 | 0.01 | lasso | 4 | 0.02 | 2.0e-03 | 9.48 | 7.5 | 6.2e-14 | 0.62 | 0.28 | 0.47 | FALSE |
110 | METSIM | Adipose | RAB14 | 0.02 | 0.01 | blup | 417 | 0.02 | 6.5e-04 | -0.96 | -6.2 | 5.9e-10 | -0.06 | 0.45 | 0.02 | FALSE |
111 | METSIM | Adipose | RABGAP1 | 0.04 | 0.03 | lasso | 9 | 0.05 | 1.2e-08 | 8.34 | -5.4 | 8.4e-08 | -0.03 | 0.08 | 0.91 | FALSE |
112 | METSIM | Adipose | RALGPS1 | 0.04 | 0.04 | lasso | 3 | 0.04 | 2.8e-06 | -7.66 | -8.8 | 1.1e-18 | 0.01 | 0.22 | 0.78 | FALSE |
113 | NTR | Blood | MAPKAP1 | 0.03 | 0.01 | blup | 441 | 0.02 | 2.3e-07 | -6.63 | -7.2 | 8.5e-13 | 0.00 | 0.53 | 0.47 | FALSE |
114 | ROSMAP | Brain Pre-frontal Cortex | PSMD5-AS1 | 0.75 | 0.78 | lasso | 8 | 0.79 | 3.2e-164 | 9.45 | 9.2 | 3.9e-20 | 0.68 | 0.99 | 0.01 | FALSE |
115 | YFS | Blood | CIZ1 | 0.02 | 0.00 | blup | 314 | 0.01 | 6.0e-03 | -1.23 | 5.1 | 3.0e-07 | 0.06 | 0.02 | 0.18 | FALSE |
116 | YFS | Blood | MEGF9 | 0.13 | 0.19 | lasso | 12 | 0.20 | 2.9e-64 | 9.88 | -9.8 | 6.7e-23 | -0.94 | 0.61 | 0.39 | FALSE |
117 | YFS | Blood | PHF19 | 0.05 | 0.03 | enet | 21 | 0.04 | 2.9e-14 | 4.27 | -6.5 | 9.7e-11 | -0.50 | 1.00 | 0.00 | FALSE |
118 | YFS | Blood | RALGPS1 | 0.08 | 0.13 | lasso | 18 | 0.15 | 1.1e-45 | -9.38 | -9.3 | 1.0e-20 | 0.01 | 0.21 | 0.79 | FALSE |
119 | YFS | Blood | RC3H2 | 0.02 | 0.01 | bslmm | 426 | 0.01 | 1.3e-04 | 3.90 | -6.2 | 7.4e-10 | 0.01 | 0.30 | 0.70 | FALSE |
120 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | LOC253039 | 0.26 | 0.30 | lasso | 2 | 0.30 | 1.2e-25 | 9.48 | 8.9 | 5.7e-19 | 0.64 | 0.00 | 1.00 | FALSE |
121 | The Cancer Genome Atlas | Breast Invasive Carcinoma | LOC253039 | 0.18 | 0.26 | lasso | 6 | 0.27 | 1.4e-54 | 9.45 | 8.9 | 4.7e-19 | 0.68 | 0.00 | 1.00 | FALSE |
122 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | DNM1 | 0.08 | 0.00 | blup | 55 | 0.04 | 6.6e-03 | 0.24 | 5.2 | 1.7e-07 | 0.00 | 0.02 | 0.16 | FALSE |
123 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | LOC253039 | 0.36 | 0.35 | lasso | 4 | 0.35 | 5.8e-18 | 9.32 | 8.3 | 1.2e-16 | 0.62 | 0.00 | 1.00 | FALSE |
124 | The Cancer Genome Atlas | Colon Adenocarcinoma | LOC253039 | 0.41 | 0.46 | lasso | 7 | 0.46 | 2.0e-29 | 9.32 | 9.1 | 1.4e-19 | 0.68 | 0.00 | 1.00 | FALSE |
125 | The Cancer Genome Atlas | Esophageal Carcinoma | GGTA1 | 0.57 | 0.06 | enet | 36 | 0.20 | 7.4e-07 | -7.35 | 7.5 | 4.8e-14 | 0.08 | 0.02 | 0.62 | FALSE |
126 | The Cancer Genome Atlas | Esophageal Carcinoma | LOC253039 | 0.22 | 0.17 | lasso | 4 | 0.16 | 1.0e-05 | 9.45 | 9.0 | 1.6e-19 | 0.66 | 0.00 | 0.99 | FALSE |
127 | The Cancer Genome Atlas | Esophageal Carcinoma | RABGAP1 | 0.20 | 0.07 | lasso | 4 | 0.08 | 1.8e-03 | 7.22 | 6.8 | 7.5e-12 | 0.01 | 0.02 | 0.31 | FALSE |
128 | The Cancer Genome Atlas | Glioblastoma Multiforme | LOC253039 | 0.53 | 0.46 | enet | 8 | 0.43 | 1.4e-14 | 9.45 | 9.4 | 6.0e-21 | 0.72 | 0.00 | 1.00 | FALSE |
129 | The Cancer Genome Atlas | Glioblastoma Multiforme | RABGAP1 | 0.17 | 0.17 | lasso | 7 | 0.21 | 5.6e-07 | 7.67 | 8.3 | 1.0e-16 | -0.02 | 0.04 | 0.96 | FALSE |
130 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | LOC253039 | 0.18 | 0.18 | lasso | 4 | 0.20 | 1.4e-21 | 9.48 | 8.1 | 4.4e-16 | 0.54 | 0.00 | 1.00 | FALSE |
131 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | RABGAP1 | 0.02 | 0.01 | blup | 56 | 0.01 | 7.4e-03 | 7.65 | 7.9 | 2.8e-15 | -0.01 | 0.06 | 0.60 | FALSE |
132 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ANGPTL2 | 0.02 | 0.01 | lasso | 2 | 0.01 | 6.2e-02 | 6.33 | -5.6 | 2.2e-08 | -0.03 | 0.06 | 0.03 | FALSE |
133 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LOC253039 | 0.52 | 0.52 | enet | 13 | 0.56 | 2.0e-75 | 9.48 | 8.4 | 5.7e-17 | 0.63 | 0.00 | 1.00 | FALSE |
134 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PBX3 | 0.04 | 0.07 | lasso | 3 | 0.06 | 6.7e-07 | 6.68 | 6.7 | 1.8e-11 | -0.02 | 0.60 | 0.38 | FALSE |
135 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PSMD5 | 0.16 | 0.19 | lasso | 4 | 0.22 | 1.3e-24 | 9.45 | 8.4 | 3.6e-17 | 0.59 | 0.00 | 1.00 | FALSE |
136 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | LOC253039 | 0.54 | 0.53 | lasso | 4 | 0.52 | 2.0e-34 | 9.48 | 9.4 | 4.9e-21 | 0.71 | 0.00 | 1.00 | FALSE |
137 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PSMD5 | 0.14 | 0.13 | enet | 7 | 0.13 | 6.5e-08 | 8.92 | 8.6 | 6.7e-18 | 0.60 | 0.00 | 1.00 | FALSE |
138 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | RABGAP1 | 0.04 | 0.04 | lasso | 4 | 0.04 | 2.9e-03 | 8.24 | 8.4 | 3.6e-17 | -0.02 | 0.02 | 0.72 | TRUE |
139 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LOC253039 | 0.63 | 0.64 | enet | 11 | 0.66 | 1.6e-99 | 9.45 | 9.7 | 4.6e-22 | 0.71 | 0.00 | 1.00 | FALSE |
140 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PSMD5 | 0.24 | 0.24 | enet | 19 | 0.25 | 1.1e-27 | 9.45 | 9.6 | 6.8e-22 | 0.74 | 0.00 | 1.00 | FALSE |
141 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | LOC253039 | 0.18 | 0.09 | lasso | 4 | 0.12 | 2.6e-06 | 9.48 | 6.9 | 5.0e-12 | 0.55 | 0.00 | 1.00 | FALSE |
142 | The Cancer Genome Atlas | Lung Adenocarcinoma | LOC253039 | 0.34 | 0.42 | enet | 10 | 0.42 | 6.4e-54 | 9.32 | 8.6 | 5.4e-18 | 0.63 | 0.00 | 1.00 | FALSE |
143 | The Cancer Genome Atlas | Lung Adenocarcinoma | MEGF9 | 0.02 | 0.03 | blup | 51 | 0.02 | 2.4e-03 | 9.65 | 10.0 | 2.1e-23 | 0.97 | 0.01 | 0.92 | FALSE |
144 | The Cancer Genome Atlas | Lung Adenocarcinoma | PDCL | 0.06 | 0.01 | enet | 6 | 0.02 | 1.6e-03 | 2.64 | -6.5 | 5.6e-11 | -0.02 | 0.01 | 0.87 | FALSE |
145 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | LOC253039 | 0.20 | 0.25 | blup | 37 | 0.25 | 1.8e-28 | 9.32 | 8.0 | 1.2e-15 | 0.66 | 0.00 | 1.00 | FALSE |
146 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | RABGAP1 | 0.05 | 0.00 | enet | 7 | 0.01 | 1.3e-02 | 6.48 | 7.6 | 2.1e-14 | 0.00 | 0.02 | 0.56 | FALSE |
147 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | LOC253039 | 0.32 | 0.31 | lasso | 2 | 0.30 | 1.9e-20 | 9.45 | 9.6 | 7.2e-22 | 0.72 | 0.00 | 1.00 | FALSE |
148 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | LOC253039 | 0.54 | 0.61 | lasso | 5 | 0.63 | 1.6e-33 | 9.45 | 8.3 | 9.0e-17 | 0.64 | 0.00 | 1.00 | FALSE |
149 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | ANGPTL2 | 0.10 | 0.08 | blup | 38 | 0.09 | 2.8e-04 | 6.27 | 5.8 | 7.6e-09 | 0.01 | 0.23 | 0.03 | FALSE |
150 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | LOC253039 | 0.58 | 0.53 | lasso | 7 | 0.52 | 4.0e-24 | 9.48 | 8.9 | 5.5e-19 | 0.66 | 0.00 | 1.00 | FALSE |
151 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CIZ1 | 0.05 | 0.02 | blup | 46 | 0.05 | 1.6e-05 | -3.63 | -5.2 | 1.5e-07 | 0.00 | 0.05 | 0.92 | TRUE |
152 | The Cancer Genome Atlas | Prostate Adenocarcinoma | GAPVD1 | 0.02 | 0.04 | enet | 4 | 0.01 | 9.8e-03 | -5.23 | 5.2 | 2.0e-07 | 0.00 | 0.15 | 0.26 | FALSE |
153 | The Cancer Genome Atlas | Prostate Adenocarcinoma | LOC253039 | 0.48 | 0.53 | enet | 10 | 0.53 | 1.4e-65 | 9.48 | 9.0 | 1.7e-19 | 0.68 | 0.00 | 1.00 | FALSE |
154 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PBX3 | 0.03 | 0.03 | blup | 65 | 0.04 | 5.4e-05 | 6.33 | 7.2 | 8.8e-13 | -0.02 | 0.72 | 0.22 | FALSE |
155 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PSMD5 | 0.13 | 0.10 | enet | 8 | 0.11 | 2.4e-11 | 9.48 | 6.1 | 8.6e-10 | 0.58 | 0.00 | 1.00 | FALSE |
156 | The Cancer Genome Atlas | Rectum Adenocarcinoma | LOC253039 | 0.53 | 0.27 | lasso | 5 | 0.22 | 7.8e-06 | 9.45 | 8.8 | 1.5e-18 | 0.71 | 0.00 | 0.99 | FALSE |
157 | The Cancer Genome Atlas | Soft Tissue Sarcoma | LOC253039 | 0.52 | 0.48 | enet | 17 | 0.50 | 2.4e-33 | 9.32 | 8.8 | 2.1e-18 | 0.61 | 0.00 | 1.00 | FALSE |
158 | The Cancer Genome Atlas | Stomach Adenocarcinoma | LOC253039 | 0.38 | 0.41 | enet | 10 | 0.40 | 6.8e-31 | 9.48 | 8.8 | 8.6e-19 | 0.69 | 0.00 | 1.00 | FALSE |
159 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | LOC253039 | 0.55 | 0.49 | enet | 10 | 0.48 | 3.0e-19 | 9.45 | 8.1 | 4.9e-16 | 0.72 | 0.00 | 1.00 | FALSE |
160 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | RABGAP1 | 0.12 | 0.05 | blup | 58 | 0.06 | 4.2e-03 | 8.58 | 8.2 | 3.1e-16 | -0.01 | 0.05 | 0.90 | FALSE |
161 | The Cancer Genome Atlas | Thyroid Carcinoma | C5 | 0.10 | 0.04 | enet | 9 | 0.05 | 1.6e-05 | 7.84 | -8.2 | 1.7e-16 | -0.24 | 0.01 | 0.97 | FALSE |
162 | The Cancer Genome Atlas | Thyroid Carcinoma | LOC253039 | 0.72 | 0.63 | enet | 7 | 0.65 | 2.2e-83 | 9.48 | 9.1 | 9.3e-20 | 0.68 | 0.00 | 1.00 | FALSE |
163 | The Cancer Genome Atlas | Thyroid Carcinoma | OLFML2A | 0.02 | 0.01 | blup | 34 | 0.02 | 8.1e-03 | 4.30 | -5.8 | 4.8e-09 | 0.05 | 0.03 | 0.34 | FALSE |
164 | The Cancer Genome Atlas | Thyroid Carcinoma | PSMD5 | 0.34 | 0.22 | enet | 15 | 0.23 | 7.5e-22 | 9.32 | 8.2 | 3.4e-16 | 0.58 | 0.00 | 1.00 | FALSE |
165 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | LOC253039 | 0.24 | 0.26 | lasso | 2 | 0.23 | 5.7e-07 | 9.48 | 9.4 | 6.4e-21 | 0.72 | 0.00 | 1.00 | FALSE |