Best TWAS P=1.36e-24 · Best GWAS P=1.11e-25 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | C16orf3 | 0.19 | 0.10 | enet | 17 | 0.10 | 2.7e-12 | -8.94 | -8.8 | 1.3e-18 | 0.16 | 0.00 | 1.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | CHMP1A | 0.08 | 0.01 | bslmm | 427 | 0.02 | 1.5e-03 | 3.55 | 6.2 | 5.7e-10 | -0.05 | 0.10 | 0.12 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | CTU2 | 0.10 | 0.07 | lasso | 5 | 0.08 | 4.0e-10 | -7.08 | 8.3 | 1.1e-16 | -0.43 | 1.00 | 0.00 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | LOC100130015 | 0.22 | 0.15 | enet | 8 | 0.16 | 1.9e-18 | -3.66 | -5.6 | 2.0e-08 | 0.06 | 1.00 | 0.00 | FALSE |
5 | GTEx | Adipose Subcutaneous | DBNDD1 | 0.25 | 0.02 | lasso | 7 | 0.03 | 2.6e-03 | -8.94 | -7.7 | 1.0e-14 | 0.19 | 0.00 | 1.00 | FALSE |
6 | GTEx | Adipose Subcutaneous | CHMP1A | 0.29 | 0.07 | enet | 35 | 0.12 | 2.0e-10 | 6.31 | 8.0 | 1.5e-15 | -0.07 | 0.23 | 0.55 | FALSE |
7 | GTEx | Adrenal Gland | DBNDD1 | 0.45 | 0.24 | lasso | 9 | 0.28 | 1.2e-10 | -8.94 | -9.1 | 1.3e-19 | 0.13 | 0.00 | 1.00 | FALSE |
8 | GTEx | Adrenal Gland | GAS8 | 0.34 | 0.10 | enet | 34 | 0.24 | 3.4e-09 | -8.94 | -7.8 | 4.7e-15 | 0.10 | 0.00 | 0.99 | FALSE |
9 | GTEx | Adrenal Gland | URAHP | 0.22 | 0.04 | enet | 16 | 0.17 | 8.2e-07 | -8.94 | -8.9 | 4.3e-19 | 0.11 | 0.00 | 0.97 | TRUE |
10 | GTEx | Artery Aorta | CHMP1A | 0.38 | 0.00 | enet | 32 | 0.30 | 1.2e-16 | -2.98 | 6.3 | 3.5e-10 | -0.03 | 0.08 | 0.38 | FALSE |
11 | GTEx | Artery Aorta | RPL13 | 0.19 | 0.20 | lasso | 5 | 0.17 | 1.7e-09 | 5.21 | -5.6 | 1.9e-08 | 0.05 | 1.00 | 0.00 | FALSE |
12 | GTEx | Artery Coronary | DBNDD1 | 0.28 | 0.19 | lasso | 2 | 0.13 | 3.2e-05 | -8.94 | -8.6 | 7.3e-18 | 0.17 | 0.00 | 1.00 | FALSE |
13 | GTEx | Artery Tibial | DBNDD1 | 0.31 | 0.20 | enet | 20 | 0.27 | 2.0e-21 | -8.94 | -6.6 | 4.3e-11 | 0.22 | 0.00 | 1.00 | FALSE |
14 | GTEx | Artery Tibial | CHMP1A | 0.21 | 0.06 | enet | 34 | 0.11 | 7.3e-09 | 6.31 | 9.1 | 8.1e-20 | -0.09 | 0.04 | 0.69 | FALSE |
15 | GTEx | Artery Tibial | URAHP | 0.34 | 0.13 | enet | 11 | 0.17 | 1.8e-13 | -3.66 | 5.2 | 1.5e-07 | 0.01 | 1.00 | 0.00 | FALSE |
16 | GTEx | Brain Cerebellar Hemisphere | MC1R | 0.44 | 0.32 | lasso | 5 | 0.19 | 1.4e-05 | 4.38 | -5.4 | 5.9e-08 | -0.05 | 0.61 | 0.04 | FALSE |
17 | GTEx | Brain Cerebellum | GAS8 | 0.60 | 0.41 | lasso | 10 | 0.37 | 8.0e-12 | -8.94 | -8.5 | 2.5e-17 | 0.19 | 0.00 | 1.00 | FALSE |
18 | GTEx | Brain Cerebellum | URAHP | 0.60 | 0.38 | lasso | 9 | 0.33 | 1.7e-10 | -8.94 | -8.4 | 5.2e-17 | 0.18 | 0.00 | 1.00 | FALSE |
19 | GTEx | Brain Cerebellum | MC1R | 0.30 | 0.18 | enet | 24 | 0.23 | 2.2e-07 | 4.37 | -5.5 | 3.4e-08 | -0.07 | 0.56 | 0.05 | FALSE |
20 | GTEx | Brain Cortex | GAS8 | 0.28 | 0.16 | lasso | 6 | 0.14 | 1.3e-04 | -8.94 | -9.2 | 4.5e-20 | 0.16 | 0.00 | 0.99 | FALSE |
21 | GTEx | Brain Cortex | ACSF3 | 0.56 | 0.22 | enet | 42 | 0.21 | 2.4e-06 | 3.77 | 5.5 | 5.1e-08 | -0.19 | 0.88 | 0.02 | FALSE |
22 | GTEx | Brain Cortex | URAHP | 0.34 | 0.19 | enet | 15 | 0.17 | 2.4e-05 | -8.94 | -9.9 | 2.9e-23 | 0.15 | 0.00 | 1.00 | FALSE |
23 | GTEx | Brain Frontal Cortex BA9 | VPS9D1 | 0.35 | 0.20 | lasso | 5 | 0.22 | 1.7e-06 | 5.82 | 5.3 | 9.2e-08 | 0.07 | 0.32 | 0.04 | FALSE |
24 | GTEx | Breast Mammary Tissue (Female) | CHMP1A | 0.41 | 0.01 | enet | 26 | 0.07 | 3.8e-03 | 5.82 | 5.6 | 2.5e-08 | -0.13 | 0.04 | 0.08 | FALSE |
25 | GTEx | Cells Transformed fibroblasts | DBNDD1 | 0.32 | 0.20 | enet | 36 | 0.20 | 1.2e-14 | -8.94 | -8.7 | 2.3e-18 | 0.15 | 0.00 | 1.00 | FALSE |
26 | GTEx | Cells Transformed fibroblasts | VPS9D1 | 0.12 | 0.06 | lasso | 5 | 0.05 | 1.8e-04 | 4.89 | 5.8 | 6.2e-09 | -0.04 | 0.61 | 0.08 | FALSE |
27 | GTEx | Cells Transformed fibroblasts | PIEZO1 | 0.11 | 0.11 | lasso | 2 | 0.11 | 1.0e-08 | -7.44 | 6.2 | 6.2e-10 | -0.37 | 0.97 | 0.00 | FALSE |
28 | GTEx | Cells Transformed fibroblasts | CHMP1A | 0.27 | 0.06 | enet | 23 | 0.11 | 7.0e-09 | 6.31 | 10.2 | 1.4e-24 | -0.02 | 0.32 | 0.56 | TRUE |
29 | GTEx | Cells Transformed fibroblasts | RPL13 | 0.10 | 0.08 | enet | 8 | 0.09 | 3.7e-07 | 5.25 | -6.4 | 2.1e-10 | 0.09 | 0.98 | 0.00 | FALSE |
30 | GTEx | Cells Transformed fibroblasts | URAHP | 0.26 | 0.12 | enet | 21 | 0.11 | 1.0e-08 | -4.61 | 6.0 | 1.5e-09 | -0.03 | 0.99 | 0.00 | FALSE |
31 | GTEx | Cells Transformed fibroblasts | MC1R | 0.19 | 0.06 | enet | 10 | 0.10 | 5.1e-08 | 4.50 | -6.6 | 3.3e-11 | 0.01 | 0.99 | 0.00 | FALSE |
32 | GTEx | Cells Transformed fibroblasts | RP5-1142A6.9 | 0.08 | 0.07 | lasso | 4 | 0.06 | 2.6e-05 | -7.44 | 7.5 | 8.8e-14 | -0.40 | 0.89 | 0.02 | FALSE |
33 | GTEx | Cells Transformed fibroblasts | RP5-1142A6.7 | 0.08 | 0.01 | lasso | 5 | 0.00 | 1.4e-01 | -7.37 | 6.7 | 1.7e-11 | -0.40 | 0.20 | 0.04 | TRUE |
34 | GTEx | Colon Sigmoid | DBNDD1 | 0.42 | 0.13 | lasso | 5 | 0.18 | 7.6e-07 | -8.94 | -8.3 | 1.3e-16 | 0.19 | 0.00 | 1.00 | FALSE |
35 | GTEx | Colon Sigmoid | RPL13 | 0.17 | 0.18 | lasso | 1 | 0.16 | 3.1e-06 | 5.21 | -5.2 | 1.9e-07 | 0.08 | 0.78 | 0.01 | FALSE |
36 | GTEx | Colon Sigmoid | CDK10 | 0.37 | 0.12 | lasso | 8 | 0.22 | 2.2e-08 | 5.17 | -6.2 | 4.5e-10 | -0.21 | 0.60 | 0.02 | FALSE |
37 | GTEx | Colon Transverse | DBNDD1 | 0.62 | 0.40 | enet | 40 | 0.44 | 1.2e-22 | -8.94 | -9.2 | 2.2e-20 | 0.16 | 0.00 | 1.00 | FALSE |
38 | GTEx | Colon Transverse | RPL13 | 0.23 | 0.17 | lasso | 4 | 0.16 | 3.7e-08 | 6.16 | -7.1 | 1.2e-12 | 0.01 | 0.96 | 0.00 | TRUE |
39 | GTEx | Colon Transverse | MC1R | 0.10 | 0.06 | enet | 6 | 0.01 | 6.3e-02 | 4.47 | -5.2 | 1.7e-07 | -0.10 | 0.11 | 0.05 | TRUE |
40 | GTEx | Esophagus Gastroesophageal Junction | CDK10 | 0.38 | 0.28 | lasso | 4 | 0.29 | 5.6e-11 | 5.26 | -6.5 | 1.2e-10 | -0.13 | 0.98 | 0.00 | FALSE |
41 | GTEx | Esophagus Mucosa | CHMP1A | 0.17 | 0.12 | lasso | 4 | 0.16 | 5.9e-11 | 6.31 | 6.8 | 1.0e-11 | 0.10 | 1.00 | 0.00 | FALSE |
42 | GTEx | Esophagus Muscularis | DBNDD1 | 0.32 | 0.13 | enet | 23 | 0.14 | 1.2e-08 | -8.94 | -9.0 | 2.6e-19 | 0.15 | 0.00 | 1.00 | FALSE |
43 | GTEx | Esophagus Muscularis | CHMP1A | 0.15 | 0.01 | enet | 32 | 0.09 | 6.6e-06 | -3.65 | 6.9 | 4.8e-12 | -0.11 | 0.06 | 0.19 | FALSE |
44 | GTEx | Esophagus Muscularis | RPL13 | 0.17 | 0.12 | lasso | 3 | 0.11 | 2.4e-07 | 6.16 | -6.3 | 3.5e-10 | 0.06 | 0.99 | 0.00 | TRUE |
45 | GTEx | Esophagus Muscularis | CDK10 | 0.24 | 0.11 | enet | 19 | 0.14 | 4.3e-09 | 5.17 | -6.7 | 2.9e-11 | -0.21 | 0.99 | 0.00 | TRUE |
46 | GTEx | Heart Atrial Appendage | DBNDD1 | 0.52 | 0.29 | enet | 27 | 0.27 | 9.8e-13 | -8.94 | -8.3 | 1.2e-16 | 0.16 | 0.00 | 1.00 | FALSE |
47 | GTEx | Heart Left Ventricle | DBNDD1 | 0.24 | 0.18 | lasso | 4 | 0.20 | 7.6e-11 | -8.94 | -8.5 | 2.3e-17 | 0.16 | 0.00 | 1.00 | FALSE |
48 | GTEx | Liver | ACSF3 | 0.56 | 0.14 | lasso | 16 | 0.10 | 1.2e-03 | 3.84 | 5.7 | 1.1e-08 | -0.09 | 0.50 | 0.03 | FALSE |
49 | GTEx | Liver | URAHP | 0.43 | 0.21 | enet | 29 | 0.11 | 4.5e-04 | -3.66 | 6.9 | 4.3e-12 | 0.01 | 0.19 | 0.18 | FALSE |
50 | GTEx | Lung | DBNDD1 | 0.24 | 0.14 | lasso | 6 | 0.16 | 1.7e-12 | -8.94 | -9.2 | 2.6e-20 | 0.13 | 0.00 | 1.00 | FALSE |
51 | GTEx | Lung | SPIRE2 | 0.17 | 0.01 | enet | 24 | 0.04 | 7.7e-04 | 5.03 | -5.8 | 7.9e-09 | -0.05 | 0.57 | 0.02 | FALSE |
52 | GTEx | Lung | MC1R | 0.10 | 0.09 | enet | 14 | 0.07 | 3.4e-06 | 4.50 | -5.3 | 1.2e-07 | 0.00 | 0.99 | 0.00 | FALSE |
53 | GTEx | Lung | RP5-1142A6.5 | 0.15 | 0.08 | lasso | 3 | 0.09 | 4.0e-07 | -6.60 | -5.3 | 1.3e-07 | 0.15 | 0.95 | 0.00 | TRUE |
54 | GTEx | Muscle Skeletal | GAS8 | 0.49 | 0.36 | enet | 11 | 0.36 | 2.6e-37 | -4.61 | 5.6 | 2.4e-08 | -0.02 | 1.00 | 0.00 | FALSE |
55 | GTEx | Muscle Skeletal | RPL13 | 0.10 | 0.09 | lasso | 5 | 0.10 | 3.3e-10 | 5.21 | -5.6 | 1.8e-08 | 0.08 | 1.00 | 0.00 | FALSE |
56 | GTEx | Muscle Skeletal | CDK10 | 0.17 | 0.12 | lasso | 6 | 0.10 | 9.2e-10 | 5.17 | -5.6 | 2.3e-08 | -0.17 | 1.00 | 0.00 | FALSE |
57 | GTEx | Muscle Skeletal | SPG7 | 0.24 | 0.22 | lasso | 5 | 0.23 | 8.9e-23 | -4.51 | -5.7 | 1.5e-08 | -0.11 | 1.00 | 0.00 | TRUE |
58 | GTEx | Muscle Skeletal | RP5-1142A6.5 | 0.09 | 0.02 | enet | 19 | 0.02 | 3.2e-03 | -1.69 | -5.8 | 8.1e-09 | 0.26 | 0.21 | 0.04 | FALSE |
59 | GTEx | Nerve Tibial | DBNDD1 | 0.25 | 0.15 | lasso | 4 | 0.11 | 3.3e-08 | -8.94 | -8.9 | 6.9e-19 | 0.16 | 0.00 | 1.00 | FALSE |
60 | GTEx | Nerve Tibial | CHMP1A | 0.34 | 0.06 | enet | 60 | 0.12 | 1.6e-08 | 0.58 | 8.3 | 1.3e-16 | -0.03 | 0.03 | 0.65 | FALSE |
61 | GTEx | Nerve Tibial | ZNF276 | 0.14 | 0.00 | lasso | 4 | 0.01 | 3.3e-02 | -4.00 | -6.3 | 2.7e-10 | 0.04 | 0.14 | 0.06 | FALSE |
62 | GTEx | Nerve Tibial | RPL13 | 0.10 | 0.07 | lasso | 3 | 0.07 | 2.0e-05 | 6.11 | -5.6 | 2.2e-08 | 0.09 | 0.98 | 0.00 | FALSE |
63 | GTEx | Pancreas | DBNDD1 | 0.26 | 0.16 | enet | 15 | 0.18 | 5.6e-08 | -8.94 | -7.9 | 3.2e-15 | 0.10 | 0.00 | 1.00 | FALSE |
64 | GTEx | Pancreas | MC1R | 0.26 | 0.16 | enet | 21 | 0.20 | 1.1e-08 | 4.50 | -6.3 | 3.2e-10 | 0.05 | 0.56 | 0.26 | FALSE |
65 | GTEx | Pituitary | VPS9D1-AS1 | 0.21 | -0.01 | lasso | 9 | -0.01 | 5.7e-01 | 5.17 | 6.6 | 3.1e-11 | 0.15 | 0.06 | 0.06 | FALSE |
66 | GTEx | Skin Not Sun Exposed Suprapubic | DBNDD1 | 0.40 | 0.19 | lasso | 5 | 0.19 | 8.2e-11 | -8.94 | -9.4 | 8.0e-21 | 0.15 | 0.00 | 1.00 | FALSE |
67 | GTEx | Skin Not Sun Exposed Suprapubic | CHMP1A | 0.25 | 0.01 | enet | 21 | 0.08 | 5.3e-05 | 6.31 | 6.7 | 2.0e-11 | 0.09 | 0.51 | 0.04 | FALSE |
68 | GTEx | Skin Not Sun Exposed Suprapubic | RPL13 | 0.16 | 0.15 | lasso | 4 | 0.15 | 2.0e-08 | 6.11 | -6.0 | 1.8e-09 | 0.09 | 0.98 | 0.00 | FALSE |
69 | GTEx | Skin Sun Exposed Lower leg | DBNDD1 | 0.27 | 0.05 | enet | 32 | 0.14 | 6.9e-12 | -8.94 | -5.2 | 1.5e-07 | 0.14 | 0.00 | 1.00 | FALSE |
70 | GTEx | Skin Sun Exposed Lower leg | VPS9D1 | 0.24 | 0.13 | lasso | 6 | 0.15 | 3.4e-12 | 4.68 | 5.9 | 3.7e-09 | 0.07 | 1.00 | 0.00 | FALSE |
71 | GTEx | Skin Sun Exposed Lower leg | CHMP1A | 0.36 | 0.11 | enet | 29 | 0.19 | 1.5e-15 | 6.31 | 7.3 | 3.0e-13 | 0.09 | 1.00 | 0.00 | FALSE |
72 | GTEx | Skin Sun Exposed Lower leg | RPL13 | 0.11 | 0.13 | enet | 7 | 0.12 | 1.7e-10 | 4.91 | -5.5 | 3.8e-08 | 0.06 | 1.00 | 0.00 | FALSE |
73 | GTEx | Skin Sun Exposed Lower leg | SPG7 | 0.09 | 0.05 | lasso | 2 | 0.03 | 1.5e-03 | 6.16 | -5.9 | 4.6e-09 | 0.08 | 0.85 | 0.01 | FALSE |
74 | GTEx | Skin Sun Exposed Lower leg | VPS9D1-AS1 | 0.18 | 0.04 | lasso | 5 | 0.06 | 1.2e-05 | 5.03 | 6.6 | 4.5e-11 | 0.07 | 0.88 | 0.04 | FALSE |
75 | GTEx | Small Intestine Terminal Ileum | VPS9D1 | 0.34 | 0.04 | enet | 11 | 0.11 | 2.4e-03 | 5.17 | 5.8 | 7.4e-09 | 0.16 | 0.16 | 0.05 | FALSE |
76 | GTEx | Spleen | DBNDD1 | 0.21 | 0.10 | lasso | 4 | 0.13 | 4.1e-04 | -6.14 | -6.8 | 1.0e-11 | 0.16 | 0.07 | 0.32 | FALSE |
77 | GTEx | Stomach | DBNDD1 | 0.16 | 0.07 | lasso | 2 | 0.11 | 4.2e-06 | -8.94 | -8.1 | 6.2e-16 | 0.12 | 0.00 | 1.00 | FALSE |
78 | GTEx | Testis | VPS9D1 | 0.27 | 0.07 | lasso | 9 | 0.06 | 8.4e-04 | 4.68 | 6.1 | 1.1e-09 | 0.04 | 0.25 | 0.04 | FALSE |
79 | GTEx | Testis | FANCA | 0.38 | 0.35 | lasso | 6 | 0.34 | 4.7e-16 | -3.99 | 5.2 | 2.4e-07 | -0.11 | 1.00 | 0.00 | FALSE |
80 | GTEx | Testis | RP5-1142A6.2 | 0.21 | 0.13 | lasso | 4 | 0.12 | 7.2e-06 | -7.91 | -9.1 | 9.2e-20 | 0.60 | 0.15 | 0.34 | TRUE |
81 | GTEx | Thyroid | DBNDD1 | 0.26 | 0.21 | lasso | 4 | 0.20 | 1.2e-15 | -8.94 | -9.4 | 7.2e-21 | 0.15 | 0.00 | 1.00 | FALSE |
82 | GTEx | Thyroid | VPS9D1 | 0.16 | 0.08 | lasso | 4 | 0.09 | 3.7e-07 | 6.31 | 6.2 | 6.6e-10 | 0.05 | 0.98 | 0.00 | FALSE |
83 | GTEx | Thyroid | CHMP1A | 0.27 | 0.00 | enet | 39 | 0.08 | 1.2e-06 | -4.72 | 5.5 | 3.9e-08 | -0.06 | 0.04 | 0.73 | FALSE |
84 | GTEx | Thyroid | GAS8 | 0.15 | 0.00 | lasso | 5 | 0.00 | 3.8e-01 | -3.66 | -5.2 | 1.8e-07 | 0.11 | 0.03 | 0.31 | FALSE |
85 | GTEx | Thyroid | RPL13 | 0.13 | 0.05 | enet | 10 | 0.06 | 1.4e-05 | 6.31 | -6.8 | 9.3e-12 | -0.02 | 0.98 | 0.00 | FALSE |
86 | GTEx | Uterus | SNAI3-AS1 | 0.47 | 0.00 | enet | 13 | 0.04 | 5.3e-02 | -4.54 | 5.8 | 9.2e-09 | -0.24 | 0.05 | 0.07 | TRUE |
87 | GTEx | Whole Blood | SPG7 | 0.06 | 0.05 | lasso | 3 | 0.05 | 3.9e-05 | 6.03 | -6.4 | 1.2e-10 | 0.01 | 0.60 | 0.01 | FALSE |
88 | GTEx | Whole Blood | SNAI3-AS1 | 0.15 | 0.04 | enet | 21 | 0.10 | 6.7e-10 | -1.37 | 6.3 | 3.6e-10 | -0.31 | 0.60 | 0.36 | FALSE |
89 | GTEx | Whole Blood | CTD-2555A7.3 | 0.10 | 0.00 | lasso | 5 | 0.01 | 1.0e-01 | 3.25 | 6.2 | 7.3e-10 | -0.19 | 0.13 | 0.13 | TRUE |
90 | METSIM | Adipose | CHMP1A | 0.27 | 0.05 | lasso | 9 | 0.07 | 1.3e-10 | 6.31 | 9.8 | 1.3e-22 | 0.02 | 0.91 | 0.04 | FALSE |
91 | METSIM | Adipose | RPL13 | 0.05 | 0.05 | enet | 5 | 0.05 | 1.0e-07 | 6.32 | -6.1 | 1.3e-09 | 0.07 | 1.00 | 0.00 | FALSE |
92 | METSIM | Adipose | ZCCHC14 | 0.04 | 0.02 | lasso | 4 | 0.03 | 2.9e-05 | -4.75 | 5.2 | 1.6e-07 | -0.03 | 0.14 | 0.82 | TRUE |
93 | NTR | Blood | RPL13 | 0.02 | 0.01 | bslmm | 365 | 0.01 | 5.9e-05 | 6.16 | 5.4 | 7.8e-08 | -0.12 | 0.96 | 0.00 | FALSE |
94 | NTR | Blood | SNAI3 | 0.05 | 0.04 | bslmm | 374 | 0.04 | 5.0e-13 | -4.67 | -5.5 | 4.9e-08 | 0.29 | 1.00 | 0.00 | TRUE |
95 | YFS | Blood | RNF166 | 0.25 | 0.07 | bslmm | 345 | 0.14 | 6.9e-45 | 6.66 | 5.8 | 7.0e-09 | -0.24 | 1.00 | 0.00 | TRUE |
96 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CHMP1A | 0.10 | 0.07 | lasso | 2 | 0.09 | 6.7e-08 | 6.31 | 5.2 | 2.7e-07 | 0.10 | 0.99 | 0.00 | FALSE |
97 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CTU2 | 0.06 | 0.03 | blup | 67 | 0.03 | 1.3e-03 | -1.69 | 7.4 | 9.9e-14 | -0.41 | 0.05 | 0.09 | FALSE |
98 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | DPEP1 | 0.06 | 0.01 | blup | 45 | 0.03 | 1.7e-03 | 6.31 | -7.8 | 7.5e-15 | -0.04 | 0.02 | 0.42 | FALSE |
99 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | SPG7 | 0.05 | 0.03 | lasso | 3 | 0.03 | 1.8e-03 | 6.11 | -5.9 | 3.9e-09 | 0.08 | 0.02 | 0.89 | FALSE |
100 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ZNF276 | 0.09 | 0.02 | enet | 12 | 0.05 | 2.3e-05 | 4.91 | -8.1 | 5.8e-16 | -0.01 | 0.05 | 0.06 | FALSE |
101 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CTU2 | 0.03 | 0.00 | blup | 66 | 0.02 | 1.3e-04 | 3.25 | 5.7 | 1.1e-08 | -0.28 | 0.19 | 0.02 | FALSE |
102 | The Cancer Genome Atlas | Breast Invasive Carcinoma | DPEP1 | 0.05 | 0.01 | enet | 7 | 0.02 | 5.2e-05 | -8.92 | -7.5 | 5.4e-14 | 0.12 | 0.00 | 0.99 | FALSE |
103 | The Cancer Genome Atlas | Esophageal Carcinoma | RPL13 | 0.14 | 0.07 | lasso | 3 | 0.04 | 2.6e-02 | 6.11 | -6.2 | 6.1e-10 | 0.07 | 0.01 | 0.83 | FALSE |
104 | The Cancer Genome Atlas | Glioblastoma Multiforme | APRT | 0.19 | -0.01 | blup | 48 | 0.04 | 2.1e-02 | 1.55 | 6.1 | 1.3e-09 | -0.38 | 0.01 | 0.48 | FALSE |
105 | The Cancer Genome Atlas | Glioblastoma Multiforme | SNAI3 | 0.19 | 0.06 | enet | 7 | 0.12 | 1.6e-04 | 3.81 | -7.7 | 1.7e-14 | 0.44 | 0.00 | 0.86 | FALSE |
106 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | DPEP1 | 0.06 | 0.00 | enet | 5 | 0.02 | 2.5e-03 | 4.91 | -7.5 | 9.2e-14 | 0.03 | 0.01 | 0.44 | FALSE |
107 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | FANCA | 0.06 | 0.03 | blup | 77 | 0.05 | 4.5e-06 | -4.52 | 5.2 | 2.5e-07 | -0.08 | 0.98 | 0.01 | FALSE |
108 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C16orf55 | 0.07 | 0.05 | enet | 3 | 0.04 | 8.2e-06 | -8.26 | 9.2 | 5.5e-20 | -0.19 | 0.00 | 0.99 | FALSE |
109 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C16orf7 | 0.09 | 0.02 | lasso | 3 | 0.02 | 1.6e-03 | 4.68 | 7.7 | 1.1e-14 | -0.08 | 0.02 | 0.93 | FALSE |
110 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CBFA2T3 | 0.04 | 0.04 | lasso | 3 | 0.03 | 1.2e-04 | -5.50 | 5.6 | 1.9e-08 | -0.22 | 0.00 | 1.00 | FALSE |
111 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CHMP1A | 0.07 | 0.02 | blup | 38 | 0.05 | 3.5e-06 | -2.70 | 8.2 | 1.6e-16 | 0.02 | 0.42 | 0.08 | FALSE |
112 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DBNDD1 | 0.15 | 0.05 | lasso | 3 | 0.05 | 1.9e-06 | -4.72 | -7.3 | 3.8e-13 | 0.07 | 0.33 | 0.38 | FALSE |
113 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SNAI3 | 0.05 | 0.02 | lasso | 5 | 0.01 | 1.0e-02 | -4.20 | -6.2 | 7.1e-10 | 0.22 | 0.04 | 0.48 | FALSE |
114 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SPG7 | 0.05 | 0.05 | lasso | 5 | 0.05 | 1.9e-06 | 6.11 | -6.1 | 9.9e-10 | 0.08 | 0.01 | 0.99 | FALSE |
115 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CHMP1A | 0.18 | 0.01 | enet | 11 | 0.06 | 3.8e-04 | 6.31 | 8.8 | 1.1e-18 | 0.03 | 0.06 | 0.06 | FALSE |
116 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C16orf7 | 0.04 | 0.00 | blup | 44 | 0.02 | 1.6e-03 | 4.68 | 6.3 | 3.5e-10 | 0.09 | 0.11 | 0.02 | FALSE |
117 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CHMP1A | 0.07 | 0.03 | blup | 37 | 0.03 | 1.3e-04 | 6.31 | 8.4 | 5.0e-17 | 0.04 | 0.41 | 0.04 | FALSE |
118 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CTU2 | 0.10 | 0.04 | blup | 66 | 0.08 | 1.4e-09 | 5.86 | 5.4 | 8.4e-08 | -0.30 | 0.98 | 0.00 | FALSE |
119 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MGC23284 | 0.09 | 0.04 | enet | 19 | 0.03 | 1.7e-04 | -4.67 | -6.7 | 1.7e-11 | 0.45 | 0.09 | 0.86 | TRUE |
120 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SNAI3 | 0.05 | 0.06 | lasso | 3 | 0.04 | 7.0e-06 | -4.67 | -5.7 | 1.4e-08 | 0.34 | 0.22 | 0.74 | FALSE |
121 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SPG7 | 0.03 | 0.02 | blup | 58 | 0.03 | 4.1e-04 | 5.25 | -5.7 | 1.2e-08 | -0.01 | 0.03 | 0.69 | FALSE |
122 | The Cancer Genome Atlas | Lung Adenocarcinoma | DBNDD1 | 0.06 | 0.02 | blup | 66 | 0.04 | 4.1e-05 | -4.61 | -7.5 | 6.5e-14 | 0.00 | 0.03 | 0.18 | FALSE |
123 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MVD | 0.06 | 0.02 | blup | 63 | 0.03 | 5.9e-04 | 2.71 | -5.4 | 7.8e-08 | 0.44 | 0.02 | 0.08 | FALSE |
124 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | RPL13 | 0.03 | 0.01 | blup | 41 | 0.02 | 8.5e-03 | 6.30 | -6.4 | 1.9e-10 | 0.01 | 0.01 | 0.80 | FALSE |
125 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | DBNDD1 | 0.21 | 0.01 | blup | 66 | 0.10 | 7.5e-05 | -6.14 | -6.2 | 5.8e-10 | 0.11 | 0.00 | 0.94 | FALSE |
126 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | SPG7 | 0.11 | 0.09 | lasso | 2 | 0.08 | 2.5e-04 | 6.12 | -6.1 | 9.9e-10 | 0.07 | 0.02 | 0.93 | FALSE |
127 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CDK10 | 0.20 | 0.02 | enet | 15 | 0.08 | 5.3e-04 | 6.31 | -7.4 | 1.7e-13 | -0.08 | 0.06 | 0.04 | FALSE |
128 | The Cancer Genome Atlas | Prostate Adenocarcinoma | DBNDD1 | 0.25 | 0.00 | blup | 65 | 0.06 | 1.1e-06 | 4.29 | -8.4 | 3.7e-17 | -0.01 | 0.01 | 0.38 | FALSE |
129 | The Cancer Genome Atlas | Prostate Adenocarcinoma | DPEP1 | 0.08 | 0.03 | enet | 3 | 0.04 | 3.2e-05 | -8.92 | -8.8 | 9.8e-19 | 0.20 | 0.00 | 1.00 | FALSE |
130 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FANCA | 0.08 | 0.03 | blup | 76 | 0.02 | 2.1e-03 | -8.26 | 6.3 | 2.2e-10 | -0.05 | 0.00 | 0.92 | FALSE |
131 | The Cancer Genome Atlas | Stomach Adenocarcinoma | RPL13 | 0.04 | 0.03 | blup | 41 | 0.03 | 2.2e-03 | 5.21 | -6.4 | 2.0e-10 | 0.06 | 0.02 | 0.87 | FALSE |
132 | The Cancer Genome Atlas | Thyroid Carcinoma | CHMP1A | 0.11 | 0.09 | blup | 38 | 0.08 | 5.1e-08 | -2.70 | 8.0 | 1.6e-15 | 0.05 | 1.00 | 0.00 | FALSE |
133 | The Cancer Genome Atlas | Thyroid Carcinoma | DBNDD1 | 0.17 | 0.00 | blup | 66 | 0.04 | 6.6e-05 | -6.17 | -9.9 | 2.7e-23 | 0.05 | 0.00 | 0.87 | FALSE |