Best TWAS P=5.92e-66 · Best GWAS P=3.32e-95 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | LRRC37B | 0.09 | 0.08 | lasso | 6 | 0.09 | 1.7e-11 | 6.33 | 6.2 | 4.1e-10 | 0.03 | 0.03 | 0.97 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | NF1 | 0.06 | 0.01 | blup | 410 | 0.04 | 1.1e-05 | 7.92 | 7.0 | 3.1e-12 | -0.20 | 0.95 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | UTP6 | 0.08 | 0.08 | lasso | 3 | 0.08 | 4.3e-10 | 6.29 | -6.2 | 5.4e-10 | -0.05 | 1.00 | 0.00 | FALSE |
4 | GTEx | Adipose Subcutaneous | ANKRD13B | 0.14 | 0.14 | lasso | 5 | 0.15 | 2.0e-12 | -6.56 | -6.0 | 1.6e-09 | -0.09 | 1.00 | 0.00 | FALSE |
5 | GTEx | Adipose Visceral Omentum | TEFM | 0.12 | 0.02 | lasso | 14 | 0.05 | 1.0e-03 | 1.49 | -5.4 | 6.8e-08 | 0.21 | 0.08 | 0.09 | FALSE |
6 | GTEx | Adipose Visceral Omentum | CRLF3 | 0.09 | 0.04 | enet | 37 | 0.04 | 4.6e-03 | 1.49 | -5.4 | 7.5e-08 | 0.30 | 0.24 | 0.09 | FALSE |
7 | GTEx | Adipose Visceral Omentum | SUZ12P | 0.08 | 0.07 | enet | 14 | 0.07 | 1.2e-04 | 3.23 | -6.5 | 1.1e-10 | 0.38 | 0.67 | 0.19 | FALSE |
8 | GTEx | Artery Aorta | ABHD15 | 0.20 | 0.03 | enet | 36 | 0.06 | 2.9e-04 | -7.81 | -8.9 | 5.6e-19 | 0.08 | 0.03 | 0.54 | FALSE |
9 | GTEx | Artery Aorta | TEFM | 0.13 | 0.02 | enet | 34 | 0.03 | 5.8e-03 | 1.50 | -11.0 | 4.8e-28 | 0.57 | 0.15 | 0.78 | FALSE |
10 | GTEx | Artery Aorta | CRLF3 | 0.12 | 0.03 | enet | 33 | 0.06 | 3.8e-04 | 1.57 | -11.3 | 2.1e-29 | 0.53 | 0.25 | 0.70 | TRUE |
11 | GTEx | Artery Tibial | UTP6 | 0.07 | 0.02 | lasso | 3 | 0.02 | 5.9e-03 | 6.44 | -6.4 | 1.3e-10 | -0.05 | 0.45 | 0.06 | FALSE |
12 | GTEx | Artery Tibial | RP11-848P1.7 | 0.54 | 0.00 | lasso | 10 | 0.02 | 7.3e-03 | -10.47 | -17.2 | 5.9e-66 | 0.47 | 0.02 | 0.06 | TRUE |
13 | GTEx | Brain Caudate basal ganglia | TEFM | 0.27 | 0.19 | enet | 41 | 0.20 | 2.7e-06 | 1.57 | -5.2 | 2.5e-07 | 0.28 | 0.66 | 0.06 | FALSE |
14 | GTEx | Brain Cerebellar Hemisphere | TEFM | 0.31 | 0.28 | lasso | 6 | 0.29 | 3.6e-08 | 3.41 | -6.5 | 5.9e-11 | 0.30 | 0.50 | 0.28 | FALSE |
15 | GTEx | Brain Cerebellar Hemisphere | CRLF3 | 0.38 | 0.35 | enet | 26 | 0.35 | 6.0e-10 | 3.40 | -8.2 | 2.8e-16 | 0.32 | 0.97 | 0.01 | FALSE |
16 | GTEx | Brain Cerebellar Hemisphere | RP11-848P1.2 | 0.66 | 0.08 | lasso | 7 | 0.09 | 2.3e-03 | 3.95 | 6.2 | 4.3e-10 | -0.13 | 0.09 | 0.15 | TRUE |
17 | GTEx | Brain Cerebellum | CRLF3 | 0.52 | 0.12 | lasso | 27 | 0.20 | 1.3e-06 | -16.42 | -14.4 | 3.8e-47 | 0.56 | 0.09 | 0.74 | FALSE |
18 | GTEx | Brain Cortex | LRRC37B | 0.14 | 0.06 | lasso | 8 | 0.02 | 9.5e-02 | 6.29 | 6.2 | 5.8e-10 | 0.04 | 0.03 | 0.78 | FALSE |
19 | GTEx | Brain Nucleus accumbens basal ganglia | CORO6 | 0.11 | 0.10 | lasso | 2 | 0.05 | 2.2e-02 | 5.89 | -6.0 | 1.5e-09 | -0.12 | 0.24 | 0.04 | FALSE |
20 | GTEx | Breast Mammary Tissue | CRLF3 | 0.10 | 0.10 | lasso | 3 | 0.05 | 9.6e-04 | 3.97 | -7.7 | 1.1e-14 | 0.31 | 0.09 | 0.62 | FALSE |
21 | GTEx | Breast Mammary Tissue | CTC-542B22.2 | 0.07 | 0.01 | enet | 8 | 0.03 | 1.7e-02 | 6.44 | 5.9 | 2.8e-09 | 0.06 | 0.36 | 0.03 | FALSE |
22 | GTEx | Breast Mammary Tissue (Male) | SUZ12P | 0.13 | 0.06 | lasso | 2 | 0.05 | 2.8e-02 | 4.19 | -5.2 | 2.5e-07 | 0.19 | 0.06 | 0.15 | FALSE |
23 | GTEx | Cells EBV-transformed lymphocytes | RHOT1 | 0.10 | 0.01 | lasso | 13 | 0.01 | 1.1e-01 | 6.43 | -6.4 | 1.9e-10 | -0.04 | 0.03 | 0.75 | FALSE |
24 | GTEx | Cells EBV-transformed lymphocytes | EVI2A | 0.13 | 0.03 | lasso | 4 | 0.01 | 1.5e-01 | 7.92 | -7.6 | 4.0e-14 | 0.17 | 0.16 | 0.04 | FALSE |
25 | GTEx | Cells Transformed fibroblasts | OMG | 0.06 | 0.02 | lasso | 2 | 0.01 | 2.5e-02 | 7.89 | 7.5 | 4.8e-14 | -0.22 | 0.14 | 0.07 | FALSE |
26 | GTEx | Cells Transformed fibroblasts | TEFM | 0.15 | 0.09 | lasso | 16 | 0.09 | 6.1e-07 | 1.49 | -6.8 | 1.2e-11 | 0.45 | 0.96 | 0.04 | FALSE |
27 | GTEx | Cells Transformed fibroblasts | LRRC37B | 0.09 | 0.05 | lasso | 5 | 0.05 | 9.7e-05 | 6.33 | 6.4 | 1.8e-10 | 0.04 | 0.03 | 0.96 | FALSE |
28 | GTEx | Cells Transformed fibroblasts | CTC-542B22.2 | 0.12 | 0.03 | lasso | 6 | 0.05 | 2.1e-04 | 6.06 | 6.5 | 6.7e-11 | 0.04 | 0.90 | 0.01 | TRUE |
29 | GTEx | Cells Transformed fibroblasts | SUZ12P | 0.25 | 0.24 | lasso | 11 | 0.24 | 3.7e-18 | 3.18 | -5.1 | 2.9e-07 | 0.25 | 1.00 | 0.00 | FALSE |
30 | GTEx | Colon Transverse | RHOT1 | 0.12 | 0.00 | enet | 23 | 0.00 | 3.6e-01 | 6.43 | -5.7 | 1.4e-08 | -0.05 | 0.04 | 0.79 | FALSE |
31 | GTEx | Colon Transverse | TP53I13 | 0.33 | 0.20 | lasso | 5 | 0.21 | 3.0e-10 | -4.20 | 5.1 | 2.9e-07 | 0.03 | 0.99 | 0.00 | FALSE |
32 | GTEx | Colon Transverse | CRLF3 | 0.16 | 0.07 | lasso | 6 | 0.05 | 1.5e-03 | 1.57 | -7.8 | 4.6e-15 | 0.42 | 0.15 | 0.64 | FALSE |
33 | GTEx | Esophagus Mucosa | RHOT1 | 0.07 | 0.00 | lasso | 14 | 0.00 | 1.5e-01 | 6.32 | -6.2 | 7.1e-10 | -0.04 | 0.03 | 0.52 | FALSE |
34 | GTEx | Esophagus Mucosa | ABHD15 | 0.21 | 0.13 | lasso | 1 | 0.10 | 1.7e-07 | -7.81 | -7.8 | 5.8e-15 | 0.00 | 0.98 | 0.00 | FALSE |
35 | GTEx | Esophagus Mucosa | COPRS | 0.23 | 0.21 | enet | 24 | 0.19 | 1.7e-12 | 6.29 | -5.9 | 4.2e-09 | -0.06 | 1.00 | 0.00 | FALSE |
36 | GTEx | Esophagus Muscularis | BLMH | 0.15 | 0.02 | lasso | 8 | 0.01 | 1.0e-01 | -8.38 | 10.6 | 2.2e-26 | -0.13 | 0.04 | 0.46 | FALSE |
37 | GTEx | Esophagus Muscularis | CRLF3 | 0.17 | 0.12 | lasso | 6 | 0.18 | 5.1e-11 | 3.23 | -10.8 | 5.2e-27 | 0.46 | 0.94 | 0.05 | FALSE |
38 | GTEx | Heart Atrial Appendage | TP53I13 | 0.19 | 0.14 | enet | 10 | 0.13 | 1.6e-06 | -4.17 | 6.1 | 1.1e-09 | 0.00 | 0.48 | 0.02 | FALSE |
39 | GTEx | Heart Atrial Appendage | ANKRD13B | 0.14 | 0.09 | enet | 8 | 0.11 | 1.2e-05 | -7.81 | -9.3 | 1.3e-20 | 0.04 | 0.39 | 0.16 | FALSE |
40 | GTEx | Lung | ANKRD13B | 0.13 | 0.09 | lasso | 6 | 0.08 | 6.8e-07 | -6.56 | -7.3 | 2.8e-13 | -0.10 | 0.99 | 0.00 | FALSE |
41 | GTEx | Muscle Skeletal | TP53I13 | 0.08 | 0.02 | lasso | 4 | 0.02 | 2.2e-03 | -7.81 | 6.4 | 1.2e-10 | -0.08 | 0.11 | 0.09 | FALSE |
42 | GTEx | Nerve Tibial | SSH2 | 0.05 | 0.06 | lasso | 10 | 0.06 | 7.8e-05 | 5.97 | 6.0 | 2.2e-09 | 0.14 | 0.96 | 0.00 | FALSE |
43 | GTEx | Nerve Tibial | TEFM | 0.16 | 0.01 | lasso | 4 | 0.06 | 2.7e-05 | 1.57 | -8.6 | 7.6e-18 | 0.43 | 0.26 | 0.59 | FALSE |
44 | GTEx | Nerve Tibial | COPRS | 0.08 | 0.05 | lasso | 3 | 0.03 | 2.8e-03 | 4.89 | -5.3 | 1.0e-07 | -0.04 | 0.37 | 0.02 | FALSE |
45 | GTEx | Nerve Tibial | CRLF3 | 0.38 | 0.16 | lasso | 14 | 0.19 | 3.0e-13 | 3.16 | -8.8 | 1.7e-18 | 0.38 | 1.00 | 0.00 | FALSE |
46 | GTEx | Nerve Tibial | RP11-68I3.4 | 0.17 | 0.12 | lasso | 5 | 0.10 | 6.8e-08 | -7.81 | 6.7 | 2.5e-11 | 0.02 | 1.00 | 0.00 | FALSE |
47 | GTEx | Nerve Tibial | SUZ12P | 0.25 | 0.34 | enet | 44 | 0.35 | 1.1e-25 | 3.21 | -6.1 | 9.1e-10 | 0.29 | 1.00 | 0.00 | FALSE |
48 | GTEx | Ovary | CRLF3 | 0.21 | 0.14 | lasso | 4 | 0.11 | 1.0e-03 | 3.23 | -9.0 | 2.8e-19 | 0.40 | 0.06 | 0.58 | FALSE |
49 | GTEx | Pancreas | COPRS | 0.14 | 0.12 | lasso | 1 | 0.07 | 7.2e-04 | 6.29 | -6.3 | 3.1e-10 | -0.05 | 0.50 | 0.02 | FALSE |
50 | GTEx | Pituitary | SUZ12P | 0.29 | 0.23 | lasso | 9 | 0.32 | 6.0e-09 | 3.40 | -8.7 | 3.2e-18 | 0.40 | 0.86 | 0.07 | FALSE |
51 | GTEx | Prostate | CRLF3 | 0.26 | 0.09 | lasso | 14 | 0.14 | 2.7e-04 | 3.68 | -6.2 | 7.5e-10 | 0.32 | 0.16 | 0.46 | FALSE |
52 | GTEx | Skin Not Sun Exposed Suprapubic | TEFM | 0.14 | 0.03 | enet | 49 | 0.05 | 6.2e-04 | 1.49 | -6.1 | 8.1e-10 | 0.27 | 0.19 | 0.13 | FALSE |
53 | GTEx | Skin Not Sun Exposed Suprapubic | COPRS | 0.29 | 0.26 | lasso | 3 | 0.24 | 2.6e-13 | 6.29 | -6.2 | 4.9e-10 | -0.05 | 1.00 | 0.00 | FALSE |
54 | GTEx | Skin Sun Exposed Lower leg | TP53I13 | 0.13 | 0.09 | lasso | 3 | 0.09 | 6.1e-08 | -4.20 | 5.3 | 1.3e-07 | 0.03 | 0.99 | 0.00 | FALSE |
55 | GTEx | Skin Sun Exposed Lower leg | COPRS | 0.18 | 0.15 | enet | 15 | 0.16 | 4.8e-13 | 6.29 | -5.3 | 1.4e-07 | -0.04 | 1.00 | 0.00 | FALSE |
56 | GTEx | Skin Sun Exposed Lower leg | ANKRD13B | 0.08 | 0.04 | lasso | 5 | 0.06 | 1.4e-05 | -5.19 | -7.3 | 4.0e-13 | 0.01 | 0.74 | 0.02 | FALSE |
57 | GTEx | Small Intestine Terminal Ileum | RHOT1 | 0.19 | 0.01 | enet | 26 | 0.05 | 3.4e-02 | 6.33 | -6.4 | 1.6e-10 | -0.05 | 0.04 | 0.53 | FALSE |
58 | GTEx | Spleen | GIT1 | 0.15 | 0.06 | lasso | 5 | 0.06 | 1.4e-02 | -6.03 | -5.4 | 5.5e-08 | -0.10 | 0.20 | 0.09 | FALSE |
59 | GTEx | Spleen | EVI2A | 0.22 | 0.12 | lasso | 4 | 0.07 | 8.3e-03 | 6.38 | -7.5 | 9.3e-14 | 0.17 | 0.11 | 0.05 | FALSE |
60 | GTEx | Spleen | OMG | 0.41 | 0.10 | enet | 26 | 0.08 | 4.5e-03 | 7.89 | 7.8 | 7.8e-15 | -0.23 | 0.64 | 0.03 | FALSE |
61 | GTEx | Testis | COPRS | 0.31 | 0.26 | enet | 11 | 0.28 | 4.3e-13 | 6.06 | 6.2 | 7.9e-10 | 0.05 | 1.00 | 0.00 | FALSE |
62 | GTEx | Testis | CRLF3 | 0.26 | 0.19 | enet | 23 | 0.17 | 3.8e-08 | 3.18 | -8.1 | 5.6e-16 | 0.38 | 0.99 | 0.00 | FALSE |
63 | GTEx | Testis | RP11-68I3.4 | 0.10 | 0.02 | lasso | 4 | 0.03 | 1.4e-02 | -4.20 | 5.9 | 3.1e-09 | 0.05 | 0.19 | 0.28 | FALSE |
64 | GTEx | Thyroid | GIT1 | 0.06 | 0.08 | lasso | 5 | 0.09 | 3.7e-07 | -6.18 | 6.8 | 1.3e-11 | 0.10 | 1.00 | 0.00 | FALSE |
65 | GTEx | Thyroid | SSH2 | 0.12 | 0.17 | enet | 10 | 0.18 | 2.0e-13 | -6.47 | 6.7 | 1.9e-11 | 0.10 | 1.00 | 0.00 | FALSE |
66 | GTEx | Thyroid | TP53I13 | 0.14 | 0.16 | enet | 7 | 0.14 | 6.0e-11 | -7.81 | 8.4 | 3.7e-17 | 0.05 | 1.00 | 0.00 | FALSE |
67 | GTEx | Thyroid | CORO6 | 0.23 | 0.36 | lasso | 5 | 0.37 | 1.2e-29 | -6.47 | 6.5 | 8.5e-11 | 0.09 | 1.00 | 0.00 | FALSE |
68 | GTEx | Thyroid | COPRS | 0.17 | 0.00 | enet | 43 | 0.01 | 1.2e-01 | 4.89 | -7.1 | 9.3e-13 | 0.13 | 0.04 | 0.18 | FALSE |
69 | GTEx | Thyroid | CRLF3 | 0.10 | 0.04 | enet | 35 | 0.08 | 1.1e-06 | 3.16 | -8.5 | 2.1e-17 | 0.38 | 0.91 | 0.05 | FALSE |
70 | GTEx | Whole Blood | EVI2A | 0.07 | 0.04 | lasso | 4 | 0.04 | 2.6e-04 | 6.50 | -7.0 | 2.7e-12 | 0.14 | 0.89 | 0.00 | FALSE |
71 | METSIM | Adipose | ANKRD13B | 0.04 | 0.03 | lasso | 3 | 0.05 | 1.4e-07 | 6.23 | -7.4 | 1.0e-13 | -0.14 | 1.00 | 0.00 | FALSE |
72 | METSIM | Adipose | CORO6 | 0.02 | 0.02 | bslmm | 314 | 0.01 | 1.7e-02 | 7.99 | -6.1 | 1.2e-09 | -0.14 | 0.38 | 0.02 | FALSE |
73 | METSIM | Adipose | CTD-2349P21.5 | 0.02 | 0.00 | bslmm | 252 | 0.01 | 3.0e-03 | -14.48 | -11.0 | 3.1e-28 | 0.33 | 0.04 | 0.31 | FALSE |
74 | METSIM | Adipose | NF1 | 0.04 | 0.00 | blup | 396 | 0.01 | 5.5e-03 | 7.19 | 8.2 | 3.4e-16 | -0.30 | 0.80 | 0.02 | FALSE |
75 | METSIM | Adipose | RHOT1 | 0.05 | 0.02 | blup | 336 | 0.06 | 1.0e-08 | 6.43 | -5.8 | 5.3e-09 | -0.03 | 0.05 | 0.95 | FALSE |
76 | METSIM | Adipose | SSH2 | 0.03 | 0.03 | blup | 422 | 0.02 | 1.5e-04 | -5.54 | 5.5 | 3.3e-08 | 0.17 | 0.99 | 0.00 | FALSE |
77 | METSIM | Adipose | TEFM | 0.08 | 0.06 | blup | 246 | 0.06 | 8.8e-10 | -20.70 | -11.3 | 2.1e-29 | 0.57 | 0.00 | 1.00 | FALSE |
78 | METSIM | Adipose | TP53I13 | 0.05 | 0.02 | enet | 8 | 0.03 | 2.7e-05 | -5.05 | 7.4 | 1.1e-13 | -0.04 | 0.87 | 0.01 | TRUE |
79 | NTR | Blood | RAB11FIP4 | 0.11 | 0.05 | enet | 23 | 0.08 | 1.1e-24 | 7.14 | -8.0 | 1.4e-15 | 0.22 | 1.00 | 0.00 | TRUE |
80 | YFS | Blood | EVI2A | 0.03 | 0.05 | lasso | 4 | 0.04 | 1.0e-13 | 6.38 | -6.3 | 2.3e-10 | 0.10 | 1.00 | 0.00 | FALSE |
81 | YFS | Blood | EVI2B | 0.01 | 0.00 | blup | 339 | 0.00 | 6.4e-02 | 2.06 | 8.2 | 1.5e-16 | -0.26 | 0.07 | 0.02 | FALSE |
82 | YFS | Blood | GIT1 | 0.11 | 0.08 | lasso | 8 | 0.09 | 8.7e-27 | 2.85 | -5.7 | 1.6e-08 | -0.09 | 1.00 | 0.00 | FALSE |
83 | YFS | Blood | RAB11FIP4 | 0.16 | 0.06 | enet | 18 | 0.09 | 5.9e-27 | 7.14 | -6.1 | 9.2e-10 | 0.16 | 1.00 | 0.00 | FALSE |
84 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | EFCAB5 | 0.06 | 0.08 | lasso | 2 | 0.07 | 1.4e-06 | 6.31 | 6.5 | 8.2e-11 | 0.10 | 0.02 | 0.98 | FALSE |
85 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | EVI2A | 0.03 | 0.03 | blup | 37 | 0.03 | 2.3e-03 | 6.42 | -6.3 | 2.3e-10 | 0.10 | 0.06 | 0.36 | FALSE |
86 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | OMG | 0.02 | 0.02 | blup | 31 | 0.02 | 3.2e-03 | 6.47 | -7.4 | 1.4e-13 | 0.15 | 0.03 | 0.76 | FALSE |
87 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ABHD15 | 0.04 | 0.03 | lasso | 2 | 0.02 | 1.4e-05 | -7.81 | -8.8 | 1.3e-18 | -0.01 | 0.47 | 0.01 | FALSE |
88 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C17orf79 | 0.02 | 0.03 | lasso | 4 | 0.02 | 8.7e-06 | 4.89 | -5.4 | 8.4e-08 | -0.04 | 0.02 | 0.96 | FALSE |
89 | The Cancer Genome Atlas | Breast Invasive Carcinoma | EFCAB5 | 0.02 | 0.04 | lasso | 4 | 0.04 | 1.9e-08 | 5.37 | 5.6 | 2.8e-08 | 0.15 | 0.07 | 0.93 | FALSE |
90 | The Cancer Genome Atlas | Breast Invasive Carcinoma | EVI2A | 0.03 | 0.03 | blup | 38 | 0.03 | 6.9e-07 | 6.35 | -6.5 | 9.5e-11 | 0.12 | 0.32 | 0.68 | TRUE |
91 | The Cancer Genome Atlas | Breast Invasive Carcinoma | GOSR1 | 0.02 | 0.01 | enet | 4 | 0.01 | 1.7e-02 | -10.56 | 10.5 | 6.6e-26 | -0.27 | 0.01 | 0.84 | TRUE |
92 | The Cancer Genome Atlas | Breast Invasive Carcinoma | OMG | 0.03 | 0.04 | lasso | 1 | 0.04 | 1.1e-08 | 8.21 | -8.2 | 2.2e-16 | 0.23 | 0.01 | 0.99 | FALSE |
93 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SSH2 | 0.01 | 0.01 | blup | 111 | 0.01 | 1.0e-03 | -5.68 | 6.4 | 1.3e-10 | 0.13 | 0.69 | 0.09 | FALSE |
94 | The Cancer Genome Atlas | Colon Adenocarcinoma | LRRC37B2 | 0.09 | 0.00 | enet | 11 | 0.03 | 7.3e-03 | 2.90 | -8.9 | 3.6e-19 | 0.47 | 0.01 | 0.26 | FALSE |
95 | The Cancer Genome Atlas | Esophageal Carcinoma | CCDC55 | 0.27 | 0.00 | blup | 64 | 0.00 | 3.5e-01 | 0.24 | -5.3 | 1.3e-07 | -0.05 | 0.02 | 0.05 | FALSE |
96 | The Cancer Genome Atlas | Esophageal Carcinoma | OMG | 0.09 | 0.09 | blup | 31 | 0.11 | 2.0e-04 | 8.29 | -7.9 | 3.8e-15 | 0.18 | 0.02 | 0.92 | FALSE |
97 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | C17orf79 | 0.04 | 0.01 | blup | 26 | 0.01 | 9.1e-03 | 6.22 | -6.1 | 1.0e-09 | -0.02 | 0.01 | 0.90 | FALSE |
98 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ATAD5 | 0.04 | 0.01 | blup | 48 | 0.02 | 1.4e-03 | 1.50 | -6.2 | 4.8e-10 | 0.13 | 0.15 | 0.06 | FALSE |
99 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CRLF3 | 0.08 | 0.04 | lasso | 5 | 0.07 | 7.9e-08 | 3.18 | 5.4 | 7.3e-08 | -0.20 | 0.45 | 0.55 | FALSE |
100 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | EFCAB5 | 0.09 | 0.12 | lasso | 5 | 0.12 | 3.1e-13 | 5.96 | 5.7 | 1.1e-08 | 0.15 | 0.05 | 0.95 | FALSE |
101 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | OMG | 0.02 | 0.02 | blup | 31 | 0.03 | 6.9e-04 | 8.13 | -7.6 | 2.7e-14 | 0.17 | 0.02 | 0.90 | FALSE |
102 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SSH2 | 0.03 | 0.02 | blup | 112 | 0.03 | 2.4e-04 | 6.11 | 6.4 | 1.9e-10 | 0.14 | 0.88 | 0.00 | FALSE |
103 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CRLF3 | 0.07 | 0.06 | blup | 37 | 0.08 | 2.8e-09 | 3.18 | -6.6 | 3.8e-11 | 0.37 | 1.00 | 0.00 | FALSE |
104 | The Cancer Genome Atlas | Brain Lower Grade Glioma | EFCAB5 | 0.07 | 0.09 | enet | 16 | 0.08 | 4.0e-09 | 5.64 | 5.3 | 1.1e-07 | 0.16 | 0.12 | 0.88 | FALSE |
105 | The Cancer Genome Atlas | Brain Lower Grade Glioma | EVI2A | 0.03 | 0.03 | blup | 38 | 0.04 | 3.0e-05 | 6.28 | -7.5 | 4.9e-14 | 0.16 | 0.04 | 0.96 | FALSE |
106 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LRRC37B | 0.07 | 0.10 | enet | 5 | 0.09 | 1.0e-10 | 6.33 | 6.3 | 2.7e-10 | 0.05 | 0.02 | 0.98 | FALSE |
107 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | NF1 | 0.04 | 0.03 | blup | 111 | 0.03 | 1.3e-02 | 8.09 | 7.9 | 4.0e-15 | -0.19 | 0.05 | 0.67 | FALSE |
108 | The Cancer Genome Atlas | Lung Adenocarcinoma | C17orf42 | 0.04 | 0.02 | enet | 5 | 0.04 | 5.4e-05 | -3.85 | -7.6 | 2.6e-14 | 0.46 | 0.17 | 0.46 | FALSE |
109 | The Cancer Genome Atlas | Lung Adenocarcinoma | EFCAB5 | 0.06 | 0.09 | lasso | 1 | 0.09 | 2.9e-10 | 6.02 | 6.0 | 1.7e-09 | 0.14 | 0.03 | 0.97 | FALSE |
110 | The Cancer Genome Atlas | Lung Adenocarcinoma | EVI2A | 0.04 | 0.06 | blup | 38 | 0.06 | 3.0e-07 | 6.26 | -7.3 | 2.2e-13 | 0.15 | 0.13 | 0.87 | FALSE |
111 | The Cancer Genome Atlas | Lung Adenocarcinoma | LRRC37B | 0.02 | 0.02 | blup | 23 | 0.02 | 3.5e-03 | 6.26 | 6.3 | 2.3e-10 | 0.05 | 0.02 | 0.86 | FALSE |
112 | The Cancer Genome Atlas | Lung Adenocarcinoma | OMG | 0.05 | 0.03 | lasso | 5 | 0.04 | 3.6e-05 | 6.37 | -5.3 | 1.5e-07 | 0.10 | 0.09 | 0.80 | FALSE |
113 | The Cancer Genome Atlas | Lung Adenocarcinoma | SSH2 | 0.06 | 0.03 | blup | 112 | 0.05 | 2.5e-06 | -6.47 | 6.9 | 6.2e-12 | 0.11 | 0.98 | 0.01 | FALSE |
114 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | EVI2A | 0.03 | 0.03 | lasso | 1 | 0.02 | 2.4e-03 | 6.11 | -6.1 | 9.7e-10 | 0.10 | 0.05 | 0.16 | FALSE |
115 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | GOSR1 | 0.15 | 0.00 | blup | 56 | 0.04 | 1.1e-03 | -3.40 | 9.3 | 1.4e-20 | -0.35 | 0.04 | 0.17 | FALSE |
116 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | OMG | 0.05 | 0.03 | blup | 32 | 0.03 | 5.6e-03 | 7.89 | -7.8 | 6.4e-15 | 0.25 | 0.01 | 0.78 | FALSE |
117 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | CRLF3 | 0.07 | 0.06 | blup | 40 | 0.06 | 2.0e-03 | 3.18 | -6.5 | 8.2e-11 | 0.32 | 0.10 | 0.04 | TRUE |
118 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | EFCAB5 | 0.08 | 0.01 | blup | 79 | 0.03 | 1.7e-02 | 5.29 | 6.1 | 1.3e-09 | 0.15 | 0.04 | 0.62 | FALSE |
119 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CRLF3 | 0.28 | 0.13 | blup | 40 | 0.11 | 3.1e-05 | 1.68 | -7.0 | 2.9e-12 | 0.28 | 0.34 | 0.03 | FALSE |
120 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ABHD15 | 0.11 | 0.08 | lasso | 2 | 0.09 | 1.1e-09 | -4.20 | -6.0 | 1.4e-09 | -0.03 | 1.00 | 0.00 | FALSE |
121 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ATAD5 | 0.14 | 0.08 | enet | 11 | 0.09 | 4.1e-10 | 1.50 | 7.2 | 5.9e-13 | -0.41 | 0.99 | 0.01 | FALSE |
122 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C17orf79 | 0.07 | 0.04 | lasso | 2 | 0.03 | 1.5e-04 | 6.06 | -6.3 | 3.1e-10 | -0.05 | 0.00 | 0.99 | FALSE |
123 | The Cancer Genome Atlas | Prostate Adenocarcinoma | EVI2A | 0.08 | 0.12 | lasso | 3 | 0.12 | 1.3e-12 | 7.19 | -7.0 | 2.5e-12 | 0.12 | 0.58 | 0.42 | FALSE |
124 | The Cancer Genome Atlas | Rectum Adenocarcinoma | TP53I13 | 0.22 | 0.09 | lasso | 1 | 0.04 | 4.4e-02 | -6.56 | 6.6 | 5.4e-11 | 0.10 | 0.03 | 0.05 | FALSE |
125 | The Cancer Genome Atlas | Soft Tissue Sarcoma | EFCAB5 | 0.06 | 0.07 | lasso | 2 | 0.05 | 8.2e-04 | 5.37 | 5.8 | 5.0e-09 | 0.14 | 0.04 | 0.94 | FALSE |
126 | The Cancer Genome Atlas | Stomach Adenocarcinoma | EFCAB5 | 0.06 | 0.02 | blup | 80 | 0.02 | 1.1e-02 | 5.75 | 5.7 | 1.0e-08 | 0.08 | 0.03 | 0.45 | FALSE |
127 | The Cancer Genome Atlas | Stomach Adenocarcinoma | EVI2A | 0.05 | 0.03 | enet | 7 | 0.04 | 4.8e-04 | 6.62 | -7.8 | 8.1e-15 | 0.13 | 0.04 | 0.62 | FALSE |
128 | The Cancer Genome Atlas | Stomach Adenocarcinoma | SUZ12P | 0.05 | 0.05 | blup | 29 | 0.04 | 5.1e-04 | 3.97 | -7.5 | 5.9e-14 | 0.32 | 0.16 | 0.16 | FALSE |
129 | The Cancer Genome Atlas | Thyroid Carcinoma | ANKRD13B | 0.14 | 0.20 | lasso | 4 | 0.19 | 2.2e-18 | -6.47 | 6.2 | 5.0e-10 | 0.10 | 1.00 | 0.00 | FALSE |
130 | The Cancer Genome Atlas | Thyroid Carcinoma | C17orf79 | 0.13 | 0.09 | blup | 26 | 0.10 | 2.4e-10 | 6.06 | -5.9 | 3.6e-09 | -0.07 | 0.00 | 1.00 | FALSE |
131 | The Cancer Genome Atlas | Thyroid Carcinoma | CORO6 | 0.28 | 0.40 | lasso | 3 | 0.39 | 6.2e-40 | -6.47 | 6.4 | 1.4e-10 | 0.09 | 0.56 | 0.44 | FALSE |
132 | The Cancer Genome Atlas | Thyroid Carcinoma | EFCAB5 | 0.11 | 0.18 | enet | 13 | 0.20 | 5.8e-19 | 5.37 | 5.3 | 1.3e-07 | 0.16 | 0.07 | 0.93 | FALSE |
133 | The Cancer Genome Atlas | Thyroid Carcinoma | OMG | 0.02 | 0.01 | blup | 32 | 0.02 | 4.8e-03 | 7.89 | -7.8 | 5.4e-15 | 0.18 | 0.02 | 0.87 | FALSE |
134 | The Cancer Genome Atlas | Thyroid Carcinoma | SSH2 | 0.25 | 0.18 | lasso | 5 | 0.17 | 4.8e-16 | -6.47 | 6.4 | 1.3e-10 | 0.10 | 0.94 | 0.06 | FALSE |
135 | The Cancer Genome Atlas | Thyroid Carcinoma | TP53I13 | 0.09 | 0.08 | enet | 10 | 0.10 | 6.4e-10 | -6.56 | 6.2 | 6.6e-10 | 0.08 | 1.00 | 0.00 | FALSE |