Best TWAS P=2.41e-39 · Best GWAS P=1.16e-42 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | DKK3 | 0.09 | 0.02 | lasso | 4 | 0.03 | 4.3e-05 | -9.1 | 9.5 | 1.9e-21 | -0.03 | 0.00 | 1.00 | TRUE |
2 | CommonMind | Brain Pre-frontal Cortex | KCNJ11 | 0.04 | 0.03 | lasso | 3 | 0.03 | 2.6e-04 | 8.2 | 9.3 | 1.6e-20 | -0.04 | 0.22 | 0.67 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | LDHAL6A | 0.25 | 0.18 | enet | 23 | 0.19 | 3.7e-23 | -5.0 | -5.2 | 1.7e-07 | 0.00 | 1.00 | 0.00 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | SAAL1 | 0.15 | 0.17 | enet | 13 | 0.21 | 1.3e-24 | -7.4 | 6.9 | 4.1e-12 | 0.00 | 0.34 | 0.66 | FALSE |
5 | CommonMind | Brain Pre-frontal Cortex | TPH1 | 0.12 | 0.08 | bslmm | 478 | 0.08 | 8.0e-10 | -6.8 | -6.1 | 1.2e-09 | -0.05 | 0.90 | 0.09 | FALSE |
6 | GTEx | Adipose Subcutaneous | SERGEF | 0.19 | 0.17 | lasso | 8 | 0.19 | 9.4e-16 | -6.3 | -7.0 | 1.9e-12 | -0.04 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adipose Subcutaneous | RRAS2 | 0.11 | 0.02 | lasso | 3 | 0.02 | 9.0e-03 | -8.2 | 8.7 | 3.0e-18 | 0.04 | 0.51 | 0.04 | TRUE |
8 | GTEx | Adipose Subcutaneous | SAAL1 | 0.10 | 0.11 | enet | 8 | 0.12 | 6.5e-10 | -6.4 | 6.2 | 5.1e-10 | 0.03 | 0.99 | 0.01 | TRUE |
9 | GTEx | Adipose Subcutaneous | SPTY2D1 | 0.18 | 0.14 | lasso | 5 | 0.14 | 6.7e-12 | -8.7 | 8.4 | 3.4e-17 | 0.02 | 1.00 | 0.00 | FALSE |
10 | GTEx | Adipose Subcutaneous | OR7E14P | 0.10 | 0.09 | lasso | 5 | 0.10 | 1.2e-08 | -11.1 | -11.3 | 2.2e-29 | 0.02 | 0.03 | 0.97 | FALSE |
11 | GTEx | Adipose Subcutaneous | RP1-59M18.2 | 0.15 | 0.04 | lasso | 9 | 0.07 | 4.0e-06 | -6.3 | -5.6 | 2.4e-08 | -0.05 | 0.98 | 0.02 | FALSE |
12 | GTEx | Adipose Subcutaneous | RP1-239B22.5 | 0.11 | 0.06 | enet | 21 | 0.07 | 1.5e-06 | 9.1 | -8.9 | 5.8e-19 | 0.01 | 0.83 | 0.12 | FALSE |
13 | GTEx | Adipose Visceral Omentum | SERGEF | 0.15 | 0.12 | enet | 9 | 0.11 | 1.9e-06 | -6.9 | -6.7 | 2.5e-11 | -0.04 | 0.96 | 0.00 | FALSE |
14 | GTEx | Adrenal Gland | SOX6 | 0.32 | 0.17 | lasso | 5 | 0.16 | 1.6e-06 | 5.5 | -5.5 | 5.1e-08 | 0.02 | 0.98 | 0.00 | TRUE |
15 | GTEx | Adrenal Gland | SAAL1 | 0.15 | 0.16 | lasso | 3 | 0.12 | 5.1e-05 | -6.4 | 6.4 | 1.7e-10 | 0.02 | 0.59 | 0.08 | FALSE |
16 | GTEx | Artery Aorta | RRAS2 | 0.06 | 0.06 | enet | 10 | 0.03 | 5.6e-03 | 7.0 | 7.6 | 2.3e-14 | 0.01 | 0.18 | 0.09 | FALSE |
17 | GTEx | Artery Aorta | SAAL1 | 0.20 | 0.15 | enet | 15 | 0.21 | 1.1e-11 | -6.4 | 6.5 | 9.5e-11 | 0.00 | 0.79 | 0.21 | TRUE |
18 | GTEx | Artery Aorta | SPTY2D1 | 0.13 | 0.17 | enet | 10 | 0.16 | 2.5e-09 | 12.9 | 13.1 | 2.4e-39 | -0.01 | 0.00 | 1.00 | TRUE |
19 | GTEx | Artery Coronary | OR7E14P | 0.19 | 0.01 | enet | 26 | 0.00 | 3.4e-01 | 9.4 | -8.4 | 6.5e-17 | -0.02 | 0.03 | 0.78 | FALSE |
20 | GTEx | Artery Tibial | TSG101 | 0.15 | 0.06 | lasso | 11 | 0.07 | 4.1e-06 | 4.1 | -5.4 | 6.5e-08 | 0.00 | 0.99 | 0.00 | FALSE |
21 | GTEx | Artery Tibial | RRAS2 | 0.08 | 0.06 | lasso | 5 | 0.07 | 5.7e-06 | -5.1 | 6.9 | 6.8e-12 | 0.03 | 0.95 | 0.00 | FALSE |
22 | GTEx | Artery Tibial | SAAL1 | 0.21 | 0.26 | lasso | 3 | 0.27 | 2.4e-21 | -6.4 | 6.2 | 4.4e-10 | 0.03 | 0.99 | 0.01 | FALSE |
23 | GTEx | Artery Tibial | OR7E14P | 0.10 | 0.07 | lasso | 8 | 0.04 | 3.4e-04 | -10.5 | -10.2 | 3.1e-24 | 0.01 | 0.02 | 0.97 | FALSE |
24 | GTEx | Artery Tibial | KCNJ11 | 0.18 | 0.19 | lasso | 6 | 0.19 | 1.6e-14 | -4.9 | -5.5 | 4.0e-08 | 0.00 | 1.00 | 0.00 | FALSE |
25 | GTEx | Brain Cerebellar Hemisphere | SAAL1 | 0.30 | 0.20 | lasso | 5 | 0.27 | 1.2e-07 | -5.8 | 6.4 | 1.8e-10 | -0.02 | 0.79 | 0.18 | FALSE |
26 | GTEx | Brain Cerebellum | COPB1 | 0.16 | 0.09 | lasso | 8 | 0.06 | 9.3e-03 | 10.2 | -9.6 | 7.2e-22 | -0.01 | 0.22 | 0.12 | FALSE |
27 | GTEx | Brain Cerebellum | SAAL1 | 0.26 | 0.23 | lasso | 9 | 0.26 | 3.6e-08 | -7.4 | 8.0 | 1.8e-15 | -0.03 | 0.36 | 0.57 | TRUE |
28 | GTEx | Brain Cortex | NUCB2 | 0.21 | 0.12 | lasso | 4 | 0.10 | 1.1e-03 | -7.3 | 8.9 | 8.0e-19 | -0.02 | 0.06 | 0.85 | FALSE |
29 | GTEx | Brain Cortex | KCNJ11 | 0.17 | 0.01 | enet | 24 | 0.06 | 7.7e-03 | -9.8 | 10.0 | 1.4e-23 | -0.02 | 0.04 | 0.77 | FALSE |
30 | GTEx | Brain Frontal Cortex BA9 | SAAL1 | 0.21 | 0.05 | enet | 14 | 0.06 | 1.1e-02 | -6.4 | 6.3 | 2.5e-10 | -0.01 | 0.15 | 0.12 | FALSE |
31 | GTEx | Brain Nucleus accumbens basal ganglia | SAAL1 | 0.43 | 0.25 | lasso | 5 | 0.20 | 4.3e-06 | -6.4 | 6.0 | 2.6e-09 | 0.02 | 0.88 | 0.03 | FALSE |
32 | GTEx | Breast Mammary Tissue | SAAL1 | 0.17 | 0.14 | enet | 11 | 0.12 | 8.5e-07 | -5.2 | 6.2 | 5.9e-10 | 0.03 | 0.98 | 0.02 | FALSE |
33 | GTEx | Breast Mammary Tissue | OR7E14P | 0.21 | 0.06 | enet | 23 | 0.08 | 7.7e-05 | 10.9 | -10.5 | 1.1e-25 | 0.04 | 0.03 | 0.97 | FALSE |
34 | GTEx | Breast Mammary Tissue (Male) | OR7E14P | 0.17 | 0.00 | enet | 17 | 0.03 | 8.3e-02 | -2.3 | -6.9 | 5.7e-12 | -0.01 | 0.06 | 0.14 | FALSE |
35 | GTEx | Breast Mammary Tissue (Female) | SAAL1 | 0.22 | 0.19 | lasso | 2 | 0.20 | 1.1e-06 | -5.2 | 5.1 | 3.0e-07 | 0.05 | 0.23 | 0.07 | TRUE |
36 | GTEx | Breast Mammary Tissue (Female) | OR7E14P | 0.19 | 0.07 | lasso | 6 | 0.07 | 3.4e-03 | 10.9 | -9.1 | 6.5e-20 | 0.05 | 0.04 | 0.76 | FALSE |
37 | GTEx | Cells EBV-transformed lymphocytes | NUCB2 | 0.36 | 0.23 | lasso | 6 | 0.24 | 2.6e-08 | -10.1 | -9.5 | 1.5e-21 | 0.04 | 0.06 | 0.94 | FALSE |
38 | GTEx | Cells EBV-transformed lymphocytes | SPON1 | 0.25 | 0.30 | lasso | 3 | 0.28 | 1.3e-09 | 7.1 | -7.1 | 1.4e-12 | -0.09 | 0.97 | 0.01 | FALSE |
39 | GTEx | Cells EBV-transformed lymphocytes | SAAL1 | 0.39 | 0.34 | lasso | 7 | 0.33 | 1.2e-11 | -6.4 | 6.5 | 7.9e-11 | 0.02 | 0.99 | 0.01 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | PIK3C2A | 0.10 | 0.08 | lasso | 4 | 0.08 | 1.3e-06 | 9.2 | -10.9 | 1.4e-27 | 0.02 | 0.07 | 0.92 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | NUCB2 | 0.13 | 0.11 | lasso | 2 | 0.09 | 1.7e-07 | -10.2 | -10.7 | 1.7e-26 | 0.03 | 0.11 | 0.89 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | COPB1 | 0.07 | 0.02 | lasso | 13 | 0.02 | 7.9e-03 | 5.7 | -7.0 | 3.0e-12 | -0.06 | 0.76 | 0.10 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | RRAS2 | 0.09 | 0.11 | lasso | 9 | 0.10 | 8.1e-08 | -8.1 | 7.8 | 8.6e-15 | 0.03 | 1.00 | 0.00 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | SAAL1 | 0.22 | 0.19 | enet | 18 | 0.23 | 4.5e-17 | -6.4 | 7.3 | 2.0e-13 | 0.02 | 0.91 | 0.09 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | SPTY2D1 | 0.31 | 0.27 | lasso | 6 | 0.26 | 2.5e-19 | 12.6 | 12.6 | 2.3e-36 | -0.02 | 0.00 | 1.00 | FALSE |
46 | GTEx | Cells Transformed fibroblasts | SPTY2D1-AS1 | 0.14 | 0.12 | lasso | 6 | 0.11 | 9.0e-09 | 12.6 | 12.3 | 1.4e-34 | -0.01 | 0.00 | 1.00 | FALSE |
47 | GTEx | Colon Transverse | NUCB2 | 0.13 | 0.09 | lasso | 6 | 0.06 | 9.6e-04 | -11.1 | -11.2 | 3.8e-29 | 0.02 | 0.02 | 0.97 | FALSE |
48 | GTEx | Colon Transverse | SAAL1 | 0.15 | 0.05 | lasso | 5 | 0.08 | 1.9e-04 | -6.4 | 6.6 | 4.3e-11 | 0.01 | 0.81 | 0.04 | FALSE |
49 | GTEx | Colon Transverse | OR7E14P | 0.21 | 0.21 | enet | 21 | 0.26 | 7.3e-13 | 10.9 | -11.8 | 2.4e-32 | -0.01 | 0.04 | 0.96 | FALSE |
50 | GTEx | Esophagus Gastroesophageal Junction | SAAL1 | 0.17 | 0.14 | enet | 9 | 0.13 | 1.9e-05 | -6.4 | 6.6 | 5.1e-11 | 0.02 | 0.77 | 0.06 | FALSE |
51 | GTEx | Esophagus Gastroesophageal Junction | TEAD1 | 0.25 | 0.02 | lasso | 4 | 0.01 | 1.1e-01 | 5.7 | 5.8 | 6.0e-09 | 0.02 | 0.12 | 0.05 | TRUE |
52 | GTEx | Esophagus Gastroesophageal Junction | KCNJ11 | 0.20 | 0.15 | lasso | 7 | 0.18 | 4.0e-07 | -8.3 | -5.6 | 2.6e-08 | 0.01 | 0.58 | 0.05 | FALSE |
53 | GTEx | Esophagus Mucosa | NUCB2 | 0.08 | 0.03 | lasso | 4 | 0.04 | 8.8e-04 | 10.9 | -11.1 | 1.3e-28 | 0.02 | 0.03 | 0.95 | FALSE |
54 | GTEx | Esophagus Mucosa | SERGEF | 0.14 | 0.20 | lasso | 3 | 0.19 | 9.5e-13 | -6.3 | -6.6 | 3.4e-11 | -0.04 | 1.00 | 0.00 | FALSE |
55 | GTEx | Esophagus Mucosa | SAAL1 | 0.11 | 0.08 | lasso | 2 | 0.08 | 3.3e-06 | -6.4 | 6.9 | 5.9e-12 | 0.01 | 0.85 | 0.14 | FALSE |
56 | GTEx | Esophagus Mucosa | OR7E14P | 0.33 | 0.32 | enet | 31 | 0.41 | 1.6e-29 | -9.8 | -11.7 | 8.0e-32 | 0.01 | 0.04 | 0.96 | FALSE |
57 | GTEx | Esophagus Mucosa | KCNJ11 | 0.27 | 0.16 | lasso | 8 | 0.22 | 1.6e-14 | -7.3 | -9.2 | 5.4e-20 | 0.03 | 0.97 | 0.03 | FALSE |
58 | GTEx | Esophagus Mucosa | NCR3LG1 | 0.38 | 0.38 | enet | 39 | 0.42 | 3.7e-30 | -7.3 | -9.3 | 1.7e-20 | 0.04 | 1.00 | 0.00 | FALSE |
59 | GTEx | Esophagus Mucosa | RP1-239B22.5 | 0.28 | 0.28 | enet | 47 | 0.32 | 2.9e-22 | -7.4 | -9.5 | 3.2e-21 | 0.02 | 0.90 | 0.10 | FALSE |
60 | GTEx | Esophagus Muscularis | SERGEF | 0.16 | 0.01 | enet | 17 | 0.11 | 4.5e-07 | 1.2 | -5.1 | 3.1e-07 | -0.04 | 0.55 | 0.02 | FALSE |
61 | GTEx | Esophagus Muscularis | SAAL1 | 0.31 | 0.22 | enet | 20 | 0.24 | 2.2e-14 | -6.4 | 7.4 | 1.9e-13 | 0.01 | 0.95 | 0.05 | FALSE |
62 | GTEx | Esophagus Muscularis | RP1-239B22.5 | 0.06 | 0.08 | enet | 8 | 0.08 | 1.3e-05 | -11.1 | -11.2 | 6.4e-29 | 0.03 | 0.02 | 0.97 | FALSE |
63 | GTEx | Heart Atrial Appendage | GTF2H1 | 0.25 | 0.02 | enet | 39 | 0.08 | 2.1e-04 | -4.5 | 6.5 | 1.0e-10 | -0.09 | 0.12 | 0.06 | FALSE |
64 | GTEx | Heart Atrial Appendage | SPON1 | 0.27 | 0.22 | enet | 16 | 0.24 | 5.6e-11 | -5.5 | -5.9 | 3.4e-09 | 0.01 | 1.00 | 0.00 | TRUE |
65 | GTEx | Heart Atrial Appendage | PDE3B | 0.17 | 0.05 | lasso | 9 | 0.04 | 5.3e-03 | -7.1 | -8.8 | 8.5e-19 | -0.03 | 0.17 | 0.06 | FALSE |
66 | GTEx | Heart Atrial Appendage | OR7E14P | 0.14 | 0.02 | lasso | 1 | 0.03 | 1.7e-02 | -11.1 | -11.1 | 1.4e-28 | 0.02 | 0.02 | 0.84 | FALSE |
67 | GTEx | Heart Left Ventricle | SERGEF | 0.19 | 0.02 | enet | 14 | 0.07 | 2.2e-04 | -6.8 | -6.5 | 9.2e-11 | -0.05 | 0.22 | 0.09 | TRUE |
68 | GTEx | Heart Left Ventricle | SPON1 | 0.18 | 0.12 | enet | 13 | 0.11 | 2.2e-06 | 5.3 | -5.2 | 2.0e-07 | 0.02 | 1.00 | 0.00 | FALSE |
69 | GTEx | Heart Left Ventricle | SAAL1 | 0.20 | 0.09 | lasso | 8 | 0.08 | 5.3e-05 | -6.7 | 7.0 | 3.7e-12 | 0.02 | 0.92 | 0.04 | FALSE |
70 | GTEx | Heart Left Ventricle | OR7E14P | 0.08 | 0.06 | enet | 18 | 0.07 | 1.2e-04 | -10.5 | -10.0 | 2.0e-23 | 0.03 | 0.04 | 0.87 | FALSE |
71 | GTEx | Liver | SPTY2D1-AS1 | 0.37 | 0.01 | enet | 10 | 0.09 | 2.1e-03 | 1.3 | 6.9 | 5.2e-12 | 0.02 | 0.03 | 0.59 | FALSE |
72 | GTEx | Lung | SERGEF | 0.10 | 0.08 | enet | 17 | 0.04 | 1.0e-03 | -6.3 | -6.4 | 1.4e-10 | -0.03 | 0.97 | 0.00 | FALSE |
73 | GTEx | Lung | RRAS2 | 0.05 | 0.03 | lasso | 1 | 0.05 | 2.2e-04 | -8.1 | 8.1 | 4.8e-16 | 0.01 | 0.41 | 0.02 | FALSE |
74 | GTEx | Lung | SAAL1 | 0.23 | 0.13 | lasso | 8 | 0.15 | 7.4e-12 | -6.4 | 5.7 | 9.5e-09 | 0.02 | 0.99 | 0.01 | FALSE |
75 | GTEx | Lung | OR7E14P | 0.22 | 0.13 | enet | 28 | 0.26 | 3.4e-20 | -9.8 | -10.7 | 1.3e-26 | -0.01 | 0.05 | 0.95 | FALSE |
76 | GTEx | Muscle Skeletal | SERGEF | 0.26 | 0.31 | enet | 11 | 0.35 | 9.7e-36 | -6.9 | -6.8 | 7.3e-12 | -0.04 | 1.00 | 0.00 | FALSE |
77 | GTEx | Muscle Skeletal | OR7E14P | 0.05 | 0.04 | enet | 13 | 0.03 | 7.5e-04 | -11.0 | -11.0 | 5.3e-28 | 0.01 | 0.02 | 0.98 | FALSE |
78 | GTEx | Muscle Skeletal | RP1-59M18.2 | 0.15 | 0.18 | enet | 8 | 0.20 | 2.4e-19 | -6.3 | -6.6 | 4.8e-11 | -0.05 | 0.94 | 0.06 | FALSE |
79 | GTEx | Nerve Tibial | SAAL1 | 0.14 | 0.15 | lasso | 1 | 0.15 | 1.4e-10 | -5.2 | 5.2 | 1.7e-07 | 0.05 | 1.00 | 0.00 | FALSE |
80 | GTEx | Nerve Tibial | OR7E14P | 0.18 | 0.28 | lasso | 3 | 0.28 | 9.5e-20 | 10.9 | -10.9 | 1.3e-27 | 0.01 | 0.04 | 0.96 | FALSE |
81 | GTEx | Nerve Tibial | RP1-239B22.5 | 0.11 | 0.08 | lasso | 2 | 0.08 | 2.9e-06 | -4.8 | -7.7 | 1.1e-14 | 0.05 | 0.24 | 0.33 | FALSE |
82 | GTEx | Ovary | NUCB2 | 0.31 | -0.01 | enet | 35 | 0.01 | 2.0e-01 | -11.1 | -10.4 | 1.9e-25 | 0.02 | 0.04 | 0.68 | FALSE |
83 | GTEx | Ovary | SPON1 | 0.31 | 0.16 | enet | 24 | 0.15 | 1.4e-04 | -5.5 | -6.2 | 4.6e-10 | 0.01 | 0.55 | 0.08 | TRUE |
84 | GTEx | Pancreas | SAAL1 | 0.29 | 0.23 | lasso | 6 | 0.22 | 1.3e-09 | -6.4 | 6.3 | 2.2e-10 | 0.01 | 0.98 | 0.02 | FALSE |
85 | GTEx | Pancreas | OR7E14P | 0.30 | 0.15 | lasso | 10 | 0.23 | 3.5e-10 | -3.2 | -8.7 | 3.2e-18 | -0.02 | 0.32 | 0.63 | FALSE |
86 | GTEx | Pituitary | SAAL1 | 0.22 | 0.12 | lasso | 4 | 0.10 | 2.2e-03 | -6.4 | 6.8 | 8.6e-12 | 0.01 | 0.14 | 0.09 | FALSE |
87 | GTEx | Skin Not Sun Exposed Suprapubic | SERGEF | 0.24 | 0.15 | lasso | 12 | 0.16 | 5.9e-09 | -6.3 | -5.9 | 3.6e-09 | -0.04 | 1.00 | 0.00 | FALSE |
88 | GTEx | Skin Not Sun Exposed Suprapubic | KCNJ11 | 0.18 | 0.07 | lasso | 6 | 0.12 | 7.0e-07 | 8.2 | -9.0 | 3.0e-19 | 0.03 | 0.87 | 0.08 | FALSE |
89 | GTEx | Skin Sun Exposed Lower leg | SERGEF | 0.12 | 0.07 | lasso | 3 | 0.07 | 3.1e-06 | -6.3 | -6.3 | 2.6e-10 | -0.04 | 0.99 | 0.00 | FALSE |
90 | GTEx | Skin Sun Exposed Lower leg | SAAL1 | 0.16 | 0.15 | lasso | 8 | 0.16 | 2.6e-13 | -4.5 | 5.7 | 1.1e-08 | 0.03 | 0.99 | 0.01 | FALSE |
91 | GTEx | Skin Sun Exposed Lower leg | OR7E14P | 0.11 | 0.05 | lasso | 6 | 0.08 | 4.3e-07 | 9.2 | -8.6 | 8.0e-18 | -0.01 | 0.37 | 0.58 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | KCNJ11 | 0.23 | 0.09 | lasso | 10 | 0.12 | 1.7e-10 | 9.3 | -9.0 | 2.1e-19 | 0.03 | 1.00 | 0.00 | FALSE |
93 | GTEx | Skin Sun Exposed Lower leg | NCR3LG1 | 0.12 | 0.12 | lasso | 5 | 0.13 | 5.0e-11 | -8.3 | -7.6 | 2.1e-14 | 0.04 | 1.00 | 0.00 | FALSE |
94 | GTEx | Skin Sun Exposed Lower leg | RP1-239B22.5 | 0.06 | 0.06 | lasso | 2 | 0.07 | 8.6e-07 | -8.3 | -9.8 | 7.7e-23 | 0.04 | 0.81 | 0.05 | FALSE |
95 | GTEx | Small Intestine Terminal Ileum | OR7E14P | 0.29 | 0.10 | enet | 19 | 0.22 | 1.3e-05 | -2.9 | -10.7 | 1.6e-26 | 0.01 | 0.07 | 0.73 | FALSE |
96 | GTEx | Spleen | NUCB2 | 0.20 | 0.21 | lasso | 2 | 0.17 | 4.2e-05 | -10.1 | -10.2 | 2.0e-24 | 0.03 | 0.05 | 0.82 | FALSE |
97 | GTEx | Stomach | OR7E14P | 0.23 | 0.07 | enet | 25 | 0.01 | 7.5e-02 | -11.2 | -11.9 | 8.1e-33 | -0.01 | 0.02 | 0.97 | TRUE |
98 | GTEx | Testis | NUCB2 | 0.28 | 0.13 | lasso | 9 | 0.10 | 2.5e-05 | -10.2 | 9.4 | 5.6e-21 | -0.03 | 0.41 | 0.34 | FALSE |
99 | GTEx | Testis | RRAS2 | 0.18 | 0.13 | enet | 19 | 0.15 | 2.7e-07 | -8.1 | 10.7 | 6.1e-27 | 0.04 | 0.69 | 0.29 | TRUE |
100 | GTEx | Testis | OR7E14P | 0.38 | 0.33 | lasso | 6 | 0.32 | 7.1e-15 | 10.9 | -11.0 | 4.4e-28 | 0.01 | 0.02 | 0.98 | FALSE |
101 | GTEx | Thyroid | NUCB2 | 0.07 | 0.02 | lasso | 4 | 0.02 | 1.3e-02 | -9.8 | -6.7 | 2.0e-11 | 0.01 | 0.03 | 0.84 | FALSE |
102 | GTEx | Thyroid | RRAS2 | 0.09 | 0.02 | enet | 8 | 0.07 | 7.6e-06 | -3.6 | 5.5 | 4.6e-08 | 0.06 | 0.56 | 0.06 | TRUE |
103 | GTEx | Thyroid | LDHA | 0.09 | 0.01 | lasso | 6 | 0.01 | 6.8e-02 | -7.8 | -8.2 | 3.5e-16 | 0.02 | 0.42 | 0.03 | TRUE |
104 | GTEx | Thyroid | SPON1 | 0.12 | 0.10 | lasso | 3 | 0.08 | 1.2e-06 | -5.5 | -5.7 | 1.5e-08 | 0.00 | 0.96 | 0.00 | FALSE |
105 | GTEx | Thyroid | SAAL1 | 0.16 | 0.10 | lasso | 6 | 0.12 | 3.3e-09 | -4.5 | 5.8 | 5.0e-09 | 0.03 | 0.99 | 0.01 | FALSE |
106 | GTEx | Thyroid | OR7E14P | 0.16 | 0.11 | lasso | 4 | 0.13 | 2.6e-10 | -3.2 | -7.2 | 8.5e-13 | -0.01 | 0.99 | 0.01 | FALSE |
107 | GTEx | Thyroid | RP1-239B22.5 | 0.08 | 0.07 | enet | 16 | 0.08 | 1.8e-06 | 9.3 | -8.1 | 7.1e-16 | 0.04 | 0.48 | 0.23 | FALSE |
108 | METSIM | Adipose | COPB1 | 0.06 | 0.01 | bslmm | 362 | 0.02 | 2.9e-04 | -2.9 | -5.2 | 1.6e-07 | 0.02 | 0.13 | 0.03 | TRUE |
109 | METSIM | Adipose | LDHA | 0.05 | 0.05 | lasso | 5 | 0.04 | 1.8e-06 | -7.7 | -7.7 | 1.2e-14 | 0.02 | 0.98 | 0.00 | FALSE |
110 | METSIM | Adipose | NUCB2 | 0.05 | 0.07 | enet | 10 | 0.05 | 4.0e-08 | -10.2 | -11.0 | 4.5e-28 | 0.02 | 0.09 | 0.91 | FALSE |
111 | METSIM | Adipose | RRAS2 | 0.07 | 0.02 | enet | 18 | 0.03 | 4.6e-05 | 5.8 | 5.4 | 7.6e-08 | 0.06 | 0.85 | 0.01 | FALSE |
112 | METSIM | Adipose | SAAL1 | 0.07 | 0.03 | enet | 28 | 0.06 | 8.2e-09 | -6.4 | 7.6 | 3.3e-14 | 0.02 | 0.97 | 0.03 | FALSE |
113 | METSIM | Adipose | SERGEF | 0.09 | 0.10 | lasso | 4 | 0.10 | 5.1e-15 | -6.3 | -6.4 | 1.3e-10 | -0.05 | 1.00 | 0.00 | FALSE |
114 | NTR | Blood | COPB1 | 0.02 | 0.01 | enet | 6 | 0.01 | 1.1e-05 | 7.4 | -7.0 | 2.9e-12 | -0.06 | 0.82 | 0.08 | FALSE |
115 | NTR | Blood | NUCB2 | 0.04 | 0.00 | bslmm | 582 | 0.02 | 4.9e-06 | -10.1 | -6.7 | 1.9e-11 | 0.10 | 0.10 | 0.19 | FALSE |
116 | NTR | Blood | SAAL1 | 0.02 | 0.01 | lasso | 3 | 0.01 | 2.2e-05 | -7.4 | 7.9 | 3.6e-15 | -0.03 | 0.15 | 0.43 | TRUE |
117 | NTR | Blood | SPON1 | 0.05 | 0.02 | blup | 507 | 0.04 | 2.4e-13 | 6.8 | -7.6 | 2.9e-14 | -0.06 | 0.99 | 0.01 | FALSE |
118 | NTR | Blood | UEVLD | 0.05 | 0.02 | bslmm | 481 | 0.02 | 2.0e-07 | 5.1 | -5.3 | 1.0e-07 | -0.03 | 1.00 | 0.00 | FALSE |
119 | ROSMAP | Brain Pre-frontal Cortex | NUCB2 | 0.23 | 0.32 | lasso | 5 | 0.31 | 8.1e-41 | -7.2 | 7.3 | 2.7e-13 | -0.04 | 1.00 | 0.00 | FALSE |
120 | ROSMAP | Brain Pre-frontal Cortex | SAAL1 | 0.15 | 0.17 | lasso | 7 | 0.17 | 5.3e-21 | -5.8 | 6.2 | 4.4e-10 | -0.02 | 1.00 | 0.00 | FALSE |
121 | ROSMAP | Brain Pre-frontal Cortex | OR7E14P | 0.04 | 0.04 | lasso | 4 | 0.04 | 9.1e-06 | -10.8 | -10.0 | 1.2e-23 | 0.02 | 0.03 | 0.97 | FALSE |
122 | ROSMAP | Brain Pre-frontal Cortex | KCNJ11 | 0.05 | 0.06 | enet | 6 | 0.05 | 3.0e-07 | 6.9 | 5.8 | 8.9e-09 | -0.02 | 0.91 | 0.01 | FALSE |
123 | YFS | Blood | COPB1 | 0.14 | 0.16 | enet | 18 | 0.17 | 2.4e-52 | 5.7 | -5.2 | 2.1e-07 | -0.07 | 1.00 | 0.00 | FALSE |
124 | YFS | Blood | NUCB2 | 0.12 | 0.13 | lasso | 4 | 0.14 | 2.7e-44 | -9.8 | -8.9 | 5.8e-19 | 0.03 | 1.00 | 0.00 | FALSE |
125 | YFS | Blood | SAAL1 | 0.14 | 0.15 | bslmm | 443 | 0.15 | 5.2e-46 | -6.4 | 6.2 | 7.4e-10 | 0.01 | 0.99 | 0.01 | FALSE |
126 | YFS | Blood | UEVLD | 0.02 | 0.02 | enet | 10 | 0.02 | 3.3e-06 | 5.3 | -5.3 | 1.4e-07 | -0.03 | 0.99 | 0.00 | FALSE |
127 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | DKFZp686O24166 | 0.04 | 0.00 | blup | 71 | 0.02 | 7.1e-03 | -8.2 | -10.1 | 7.6e-24 | 0.06 | 0.01 | 0.81 | TRUE |
128 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SAAL1 | 0.02 | 0.03 | lasso | 2 | 0.03 | 3.3e-07 | -6.4 | 6.6 | 4.4e-11 | 0.02 | 0.44 | 0.55 | FALSE |
129 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SPTY2D1 | 0.03 | 0.02 | lasso | 3 | 0.03 | 1.4e-06 | 12.6 | 10.9 | 1.3e-27 | -0.01 | 0.01 | 0.99 | FALSE |
130 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | DKFZp686O24166 | 0.08 | 0.04 | blup | 72 | 0.01 | 1.4e-01 | -7.9 | -9.6 | 1.2e-21 | 0.07 | 0.03 | 0.09 | FALSE |
131 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | PDE3B | 0.11 | 0.04 | blup | 64 | 0.06 | 9.7e-04 | -4.7 | -7.4 | 1.7e-13 | 0.01 | 0.07 | 0.84 | FALSE |
132 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | PIK3C2A | 0.04 | 0.00 | blup | 52 | 0.01 | 1.4e-01 | -11.1 | -9.6 | 1.3e-21 | 0.02 | 0.02 | 0.71 | FALSE |
133 | The Cancer Genome Atlas | Colon Adenocarcinoma | SAAL1 | 0.09 | 0.11 | lasso | 2 | 0.08 | 2.2e-05 | -5.2 | 5.2 | 1.7e-07 | 0.05 | 0.77 | 0.13 | FALSE |
134 | The Cancer Genome Atlas | Colon Adenocarcinoma | SPTY2D1 | 0.05 | 0.05 | lasso | 4 | 0.05 | 5.2e-04 | 12.6 | 11.1 | 1.9e-28 | -0.03 | 0.00 | 0.96 | FALSE |
135 | The Cancer Genome Atlas | Glioblastoma Multiforme | SAAL1 | 0.13 | 0.07 | enet | 5 | 0.08 | 2.4e-03 | -5.2 | 6.2 | 6.6e-10 | 0.02 | 0.02 | 0.87 | FALSE |
136 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | COPB1 | 0.05 | 0.03 | blup | 37 | 0.05 | 4.9e-06 | 5.9 | -5.8 | 5.9e-09 | -0.05 | 0.88 | 0.01 | FALSE |
137 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | DKFZp686O24166 | 0.05 | 0.03 | blup | 71 | 0.04 | 1.2e-05 | -6.0 | -8.7 | 3.8e-18 | 0.04 | 0.01 | 0.98 | FALSE |
138 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | MRGPRX3 | 0.14 | 0.16 | lasso | 5 | 0.16 | 1.3e-17 | -4.5 | -5.1 | 2.8e-07 | -0.04 | 1.00 | 0.00 | FALSE |
139 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SERGEF | 0.05 | 0.00 | blup | 130 | 0.03 | 2.1e-04 | -6.3 | -5.2 | 2.5e-07 | -0.05 | 0.17 | 0.12 | FALSE |
140 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ABCC8 | 0.06 | 0.01 | blup | 163 | 0.01 | 4.5e-02 | 4.3 | 8.0 | 1.0e-15 | -0.05 | 0.04 | 0.05 | FALSE |
141 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DKFZp686O24166 | 0.03 | 0.01 | blup | 72 | 0.03 | 2.4e-04 | 9.2 | -9.4 | 6.6e-21 | 0.05 | 0.01 | 0.95 | FALSE |
142 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LDHAL6A | 0.03 | 0.00 | blup | 45 | 0.01 | 9.3e-03 | 5.1 | -8.0 | 8.6e-16 | 0.00 | 0.02 | 0.29 | FALSE |
143 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NUCB2 | 0.10 | 0.04 | enet | 8 | 0.05 | 2.6e-06 | -10.7 | -11.2 | 5.5e-29 | 0.02 | 0.01 | 0.99 | FALSE |
144 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SAAL1 | 0.07 | 0.07 | enet | 9 | 0.07 | 9.4e-09 | -6.4 | 6.7 | 2.2e-11 | 0.01 | 0.54 | 0.46 | FALSE |
145 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | DKFZp686O24166 | 0.08 | 0.07 | lasso | 4 | 0.05 | 1.2e-03 | -7.9 | -9.3 | 1.2e-20 | 0.04 | 0.03 | 0.93 | FALSE |
146 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | LDHA | 0.08 | 0.01 | blup | 43 | 0.02 | 2.2e-02 | -7.8 | -7.1 | 1.2e-12 | 0.05 | 0.01 | 0.72 | FALSE |
147 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PIK3C2A | 0.05 | 0.01 | blup | 52 | 0.03 | 7.2e-03 | 9.3 | -11.0 | 5.2e-28 | 0.00 | 0.03 | 0.55 | FALSE |
148 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SAAL1 | 0.15 | 0.22 | lasso | 6 | 0.22 | 1.2e-12 | -6.4 | 6.4 | 1.3e-10 | 0.02 | 0.54 | 0.46 | FALSE |
149 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LDHAL6A | 0.04 | 0.00 | blup | 45 | 0.01 | 7.2e-03 | -5.0 | -6.0 | 1.6e-09 | -0.04 | 0.01 | 0.52 | TRUE |
150 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SAAL1 | 0.12 | 0.24 | enet | 13 | 0.24 | 1.0e-26 | -6.4 | 7.0 | 2.6e-12 | 0.02 | 0.55 | 0.45 | FALSE |
151 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SERGEF | 0.07 | 0.09 | lasso | 2 | 0.08 | 9.6e-10 | -6.0 | 5.9 | 4.2e-09 | -0.04 | 0.99 | 0.01 | FALSE |
152 | The Cancer Genome Atlas | Brain Lower Grade Glioma | USP47 | 0.06 | 0.01 | enet | 11 | 0.02 | 9.8e-04 | 5.0 | 6.2 | 4.0e-10 | -0.01 | 0.10 | 0.07 | TRUE |
153 | The Cancer Genome Atlas | Lung Adenocarcinoma | DKFZp686O24166 | 0.04 | 0.01 | blup | 71 | 0.02 | 1.5e-03 | 7.7 | -8.6 | 6.3e-18 | 0.03 | 0.01 | 0.87 | FALSE |
154 | The Cancer Genome Atlas | Lung Adenocarcinoma | SAAL1 | 0.05 | 0.07 | lasso | 4 | 0.07 | 4.0e-08 | -6.4 | 6.4 | 1.4e-10 | 0.03 | 0.22 | 0.78 | FALSE |
155 | The Cancer Genome Atlas | Lung Adenocarcinoma | SERGEF | 0.04 | 0.00 | blup | 130 | 0.01 | 4.1e-02 | -6.9 | -5.4 | 6.1e-08 | -0.04 | 0.03 | 0.65 | TRUE |
156 | The Cancer Genome Atlas | Lung Adenocarcinoma | SPTY2D1 | 0.06 | 0.07 | lasso | 2 | 0.06 | 1.5e-07 | 12.9 | 12.7 | 6.1e-37 | -0.01 | 0.00 | 1.00 | FALSE |
157 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SAAL1 | 0.02 | 0.01 | blup | 52 | 0.01 | 3.7e-02 | -6.4 | 6.3 | 2.5e-10 | 0.04 | 0.05 | 0.16 | FALSE |
158 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SERGEF | 0.02 | 0.00 | blup | 130 | 0.01 | 8.6e-03 | -6.8 | -6.6 | 3.2e-11 | -0.04 | 0.08 | 0.46 | FALSE |
159 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SPTY2D1 | 0.03 | 0.00 | blup | 43 | 0.01 | 2.0e-02 | 12.9 | 11.8 | 6.1e-32 | -0.02 | 0.00 | 0.99 | FALSE |
160 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | GTF2H1 | 0.05 | 0.04 | blup | 63 | 0.03 | 6.7e-03 | -4.3 | 5.9 | 3.5e-09 | -0.03 | 0.27 | 0.20 | FALSE |
161 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SAAL1 | 0.12 | 0.06 | blup | 52 | 0.07 | 3.0e-05 | -6.4 | 6.3 | 2.8e-10 | 0.01 | 0.45 | 0.43 | FALSE |
162 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | COPB1 | 0.11 | 0.03 | blup | 37 | 0.08 | 3.9e-04 | 5.7 | -6.4 | 1.3e-10 | -0.06 | 0.08 | 0.04 | FALSE |
163 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | SAAL1 | 0.07 | 0.03 | blup | 52 | 0.05 | 5.1e-03 | -6.4 | 6.2 | 5.8e-10 | 0.01 | 0.04 | 0.34 | FALSE |
164 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | RRAS2 | 0.13 | 0.01 | blup | 11 | 0.05 | 4.0e-03 | 6.6 | 7.3 | 3.5e-13 | -0.07 | 0.01 | 0.44 | FALSE |
165 | The Cancer Genome Atlas | Prostate Adenocarcinoma | COPB1 | 0.04 | 0.07 | lasso | 7 | 0.06 | 9.9e-07 | 5.9 | -5.9 | 4.5e-09 | -0.07 | 0.98 | 0.00 | FALSE |
166 | The Cancer Genome Atlas | Prostate Adenocarcinoma | LDHA | 0.02 | 0.02 | blup | 43 | 0.02 | 7.6e-03 | -7.5 | -6.8 | 1.4e-11 | 0.00 | 0.01 | 0.96 | FALSE |
167 | The Cancer Genome Atlas | Prostate Adenocarcinoma | LDHAL6A | 0.04 | 0.00 | blup | 45 | 0.02 | 4.2e-03 | -4.6 | -7.7 | 2.1e-14 | 0.00 | 0.01 | 0.34 | FALSE |
168 | The Cancer Genome Atlas | Prostate Adenocarcinoma | NUCB2 | 0.17 | 0.06 | blup | 66 | 0.06 | 2.8e-07 | 9.0 | 7.0 | 2.2e-12 | 0.01 | 1.00 | 0.00 | FALSE |
169 | The Cancer Genome Atlas | Prostate Adenocarcinoma | RRAS2 | 0.05 | 0.01 | blup | 11 | 0.02 | 1.3e-03 | -8.1 | 9.0 | 2.7e-19 | 0.05 | 0.00 | 0.88 | FALSE |
170 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SAAL1 | 0.04 | 0.06 | lasso | 3 | 0.04 | 1.0e-04 | -6.4 | 6.5 | 8.4e-11 | 0.02 | 0.40 | 0.60 | FALSE |
171 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SERGEF | 0.06 | 0.00 | blup | 130 | 0.02 | 9.2e-03 | -6.4 | -6.1 | 9.4e-10 | -0.02 | 0.19 | 0.35 | FALSE |
172 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SPTY2D1 | 0.14 | 0.20 | lasso | 3 | 0.20 | 4.4e-21 | 12.9 | 12.8 | 2.0e-37 | -0.02 | 0.00 | 1.00 | FALSE |
173 | The Cancer Genome Atlas | Soft Tissue Sarcoma | SAAL1 | 0.04 | 0.00 | enet | 8 | 0.03 | 8.0e-03 | -7.4 | 6.7 | 1.7e-11 | 0.03 | 0.01 | 0.83 | FALSE |
174 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | GTF2H1 | 0.17 | 0.00 | blup | 64 | 0.01 | 1.5e-01 | -2.3 | 5.6 | 2.4e-08 | -0.02 | 0.02 | 0.08 | FALSE |
175 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | PIK3C2A | 0.10 | 0.09 | lasso | 7 | 0.09 | 2.7e-03 | -11.1 | -10.5 | 8.2e-26 | 0.02 | 0.02 | 0.72 | FALSE |
176 | The Cancer Genome Atlas | Stomach Adenocarcinoma | SAAL1 | 0.08 | 0.08 | blup | 52 | 0.08 | 2.8e-06 | -6.4 | 5.4 | 7.5e-08 | 0.04 | 0.09 | 0.90 | TRUE |
177 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ABCC8 | 0.20 | 0.08 | blup | 163 | 0.08 | 1.1e-03 | 3.0 | 5.6 | 2.5e-08 | -0.06 | 0.11 | 0.15 | FALSE |
178 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | COPB1 | 0.13 | 0.11 | enet | 10 | 0.12 | 4.8e-05 | 5.7 | -6.3 | 2.5e-10 | -0.06 | 0.18 | 0.06 | FALSE |
179 | The Cancer Genome Atlas | Thyroid Carcinoma | DKFZp686O24166 | 0.05 | 0.01 | blup | 72 | 0.02 | 5.1e-03 | -2.5 | -6.3 | 3.6e-10 | 0.07 | 0.02 | 0.85 | FALSE |
180 | The Cancer Genome Atlas | Thyroid Carcinoma | KCNJ11 | 0.04 | 0.01 | enet | 9 | 0.02 | 4.9e-03 | -6.0 | 7.3 | 2.3e-13 | 0.01 | 0.03 | 0.05 | FALSE |
181 | The Cancer Genome Atlas | Thyroid Carcinoma | PIK3C2A | 0.08 | 0.05 | lasso | 3 | 0.05 | 9.6e-06 | 9.3 | -8.9 | 6.8e-19 | 0.01 | 0.71 | 0.08 | FALSE |
182 | The Cancer Genome Atlas | Thyroid Carcinoma | SAAL1 | 0.18 | 0.30 | lasso | 6 | 0.30 | 2.2e-29 | -6.4 | 6.3 | 2.5e-10 | 0.02 | 0.55 | 0.45 | FALSE |
183 | The Cancer Genome Atlas | Thyroid Carcinoma | SPTY2D1 | 0.10 | 0.09 | lasso | 3 | 0.09 | 3.2e-09 | 12.6 | 12.5 | 5.5e-36 | -0.02 | 0.01 | 0.99 | FALSE |
184 | The Cancer Genome Atlas | Thyroid Carcinoma | TSG101 | 0.03 | 0.03 | enet | 9 | 0.03 | 2.8e-04 | 4.1 | -6.5 | 1.1e-10 | -0.01 | 0.08 | 0.68 | FALSE |