Best TWAS P=1.16e-57 · Best GWAS P=3.21e-37 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | GTPBP3 | 0.14 | 0.07 | bslmm | 444 | 0.09 | 2.7e-11 | 5.677 | 5.2 | 1.8e-07 | 0.00 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | HAPLN4 | 0.07 | 0.10 | lasso | 6 | 0.10 | 5.3e-12 | 12.502 | 11.4 | 6.2e-30 | 0.95 | 0.03 | 0.97 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | MAU2 | 0.09 | 0.08 | blup | 369 | 0.10 | 1.0e-12 | 0.670 | 6.8 | 1.2e-11 | -0.26 | 0.97 | 0.03 | TRUE |
4 | GTEx | Adipose Subcutaneous | ZNF14 | 0.17 | 0.08 | enet | 26 | 0.12 | 1.1e-09 | 4.196 | -5.8 | 6.1e-09 | -0.49 | 0.99 | 0.01 | FALSE |
5 | GTEx | Adipose Subcutaneous | CTD-2521M24.9 | 0.13 | 0.04 | lasso | 3 | 0.03 | 7.7e-04 | -7.458 | 8.0 | 1.0e-15 | -0.06 | 0.63 | 0.01 | FALSE |
6 | GTEx | Artery Aorta | CTD-2521M24.9 | 0.20 | 0.18 | lasso | 2 | 0.17 | 8.3e-10 | -7.458 | 7.6 | 3.6e-14 | -0.05 | 0.99 | 0.00 | FALSE |
7 | GTEx | Artery Coronary | KLHL26 | 0.24 | 0.05 | enet | 20 | 0.10 | 2.1e-04 | -4.145 | 5.1 | 3.1e-07 | 0.09 | 0.05 | 0.69 | FALSE |
8 | GTEx | Artery Coronary | ZNF253 | 0.21 | 0.00 | enet | 25 | 0.01 | 1.7e-01 | -3.091 | 6.6 | 4.7e-11 | 0.20 | 0.06 | 0.22 | TRUE |
9 | GTEx | Artery Tibial | ZNF14 | 0.15 | 0.10 | enet | 13 | 0.10 | 5.5e-08 | 5.664 | -6.7 | 2.2e-11 | -0.47 | 0.94 | 0.02 | FALSE |
10 | GTEx | Artery Tibial | SSBP4 | 0.09 | 0.04 | lasso | 5 | 0.00 | 3.0e-01 | -9.671 | 9.7 | 5.0e-22 | 0.01 | 0.02 | 0.97 | FALSE |
11 | GTEx | Brain Cerebellar Hemisphere | ATP13A1 | 0.19 | 0.15 | lasso | 2 | 0.07 | 7.3e-03 | 10.678 | 10.5 | 8.3e-26 | 0.68 | 0.08 | 0.39 | TRUE |
12 | GTEx | Brain Cerebellum | SUGP2 | 0.15 | -0.01 | enet | 27 | 0.00 | 2.3e-01 | 5.259 | 5.9 | 3.6e-09 | 0.63 | 0.05 | 0.39 | FALSE |
13 | GTEx | Brain Cerebellum | PBX4 | 0.20 | 0.09 | lasso | 6 | 0.13 | 9.9e-05 | 3.385 | 5.8 | 6.2e-09 | 0.68 | 0.21 | 0.25 | FALSE |
14 | GTEx | Brain Cerebellum | ATP13A1 | 0.17 | 0.03 | enet | 30 | 0.03 | 5.2e-02 | 4.375 | 9.7 | 4.7e-22 | 0.58 | 0.07 | 0.34 | FALSE |
15 | GTEx | Brain Cerebellum | ZNF101 | 0.25 | 0.20 | lasso | 3 | 0.16 | 2.4e-05 | 5.664 | 6.5 | 8.7e-11 | 0.51 | 0.12 | 0.31 | FALSE |
16 | GTEx | Brain Frontal Cortex BA9 | GTPBP3 | 0.44 | 0.05 | lasso | 9 | 0.09 | 2.3e-03 | 5.677 | 7.8 | 4.4e-15 | -0.04 | 0.05 | 0.10 | TRUE |
17 | GTEx | Brain Hippocampus | DDX49 | 0.23 | -0.01 | lasso | 4 | -0.01 | 6.6e-01 | -12.721 | 13.2 | 1.1e-39 | 0.21 | 0.04 | 0.34 | FALSE |
18 | GTEx | Brain Nucleus accumbens basal ganglia | ELL | 0.17 | 0.00 | lasso | 5 | 0.01 | 2.1e-01 | -9.658 | 9.1 | 1.3e-19 | 0.03 | 0.02 | 0.83 | FALSE |
19 | GTEx | Cells EBV-transformed lymphocytes | CTD-2521M24.6 | 0.41 | 0.08 | lasso | 8 | 0.05 | 1.0e-02 | -8.269 | 8.4 | 3.7e-17 | -0.06 | 0.27 | 0.08 | TRUE |
20 | GTEx | Cells EBV-transformed lymphocytes | CTD-2521M24.9 | 0.49 | 0.24 | lasso | 6 | 0.25 | 1.2e-08 | -6.712 | 7.8 | 7.8e-15 | -0.07 | 0.98 | 0.00 | FALSE |
21 | GTEx | Cells Transformed fibroblasts | LPAR2 | 0.04 | 0.05 | lasso | 2 | 0.04 | 5.5e-04 | 8.820 | -7.2 | 7.4e-13 | -0.71 | 0.12 | 0.54 | FALSE |
22 | GTEx | Cells Transformed fibroblasts | ATP13A1 | 0.14 | 0.06 | lasso | 5 | 0.05 | 2.2e-04 | -8.887 | -8.3 | 7.4e-17 | -0.09 | 0.34 | 0.23 | FALSE |
23 | GTEx | Cells Transformed fibroblasts | SSBP4 | 0.09 | 0.07 | lasso | 2 | 0.06 | 5.5e-05 | -9.772 | 9.8 | 1.3e-22 | 0.03 | 0.01 | 0.98 | FALSE |
24 | GTEx | Cells Transformed fibroblasts | MEF2B | 0.08 | 0.08 | enet | 15 | 0.09 | 1.7e-07 | -6.622 | 7.5 | 8.5e-14 | 0.13 | 0.79 | 0.08 | FALSE |
25 | GTEx | Colon Sigmoid | RFXANK | 0.19 | -0.01 | enet | 38 | 0.02 | 9.2e-02 | -8.244 | 7.2 | 4.3e-13 | 0.58 | 0.03 | 0.36 | FALSE |
26 | GTEx | Colon Sigmoid | CTD-2521M24.9 | 0.42 | 0.07 | lasso | 9 | 0.13 | 2.6e-05 | -7.458 | 7.3 | 3.2e-13 | 0.00 | 0.17 | 0.05 | FALSE |
27 | GTEx | Colon Transverse | SSBP4 | 0.18 | 0.01 | enet | 21 | 0.00 | 3.6e-01 | 2.065 | 5.6 | 2.7e-08 | 0.03 | 0.05 | 0.30 | FALSE |
28 | GTEx | Colon Transverse | YJEFN3 | 0.09 | 0.09 | lasso | 3 | 0.07 | 4.3e-04 | 12.482 | -13.0 | 1.3e-38 | -0.93 | 0.03 | 0.93 | TRUE |
29 | GTEx | Esophagus Mucosa | LPAR2 | 0.08 | 0.03 | lasso | 2 | 0.01 | 1.1e-01 | 10.775 | -10.6 | 2.6e-26 | -0.72 | 0.12 | 0.63 | FALSE |
30 | GTEx | Esophagus Mucosa | SSBP4 | 0.14 | 0.10 | lasso | 2 | 0.14 | 1.3e-09 | -9.658 | 8.7 | 4.1e-18 | 0.02 | 0.02 | 0.98 | FALSE |
31 | GTEx | Esophagus Mucosa | GATAD2A | 0.11 | 0.02 | lasso | 3 | 0.02 | 2.3e-02 | -12.614 | -12.7 | 4.9e-37 | -0.15 | 0.05 | 0.63 | FALSE |
32 | GTEx | Esophagus Mucosa | MEF2B | 0.09 | 0.10 | enet | 10 | 0.09 | 1.2e-06 | -6.622 | 6.4 | 1.5e-10 | 0.12 | 0.83 | 0.07 | FALSE |
33 | GTEx | Esophagus Muscularis | MEF2B | 0.09 | 0.10 | lasso | 2 | 0.10 | 1.4e-06 | -6.622 | 6.5 | 7.7e-11 | 0.12 | 0.88 | 0.01 | FALSE |
34 | GTEx | Esophagus Muscularis | MEF2BNB | 0.12 | 0.00 | lasso | 4 | 0.00 | 7.5e-01 | -6.848 | 6.8 | 1.0e-11 | 0.11 | 0.05 | 0.07 | FALSE |
35 | GTEx | Esophagus Muscularis | ZNF253 | 0.21 | 0.02 | lasso | 5 | 0.04 | 3.0e-03 | -4.474 | 5.4 | 5.7e-08 | 0.19 | 0.40 | 0.11 | FALSE |
36 | GTEx | Heart Atrial Appendage | OCEL1 | 0.25 | 0.01 | enet | 27 | 0.20 | 3.7e-09 | -3.104 | -6.4 | 1.3e-10 | 0.03 | 0.18 | 0.52 | FALSE |
37 | GTEx | Heart Atrial Appendage | ZNF93 | 0.14 | 0.10 | lasso | 6 | 0.12 | 6.0e-06 | -4.339 | -5.7 | 1.1e-08 | -0.02 | 0.72 | 0.04 | FALSE |
38 | GTEx | Liver | SSBP4 | 0.26 | 0.04 | lasso | 4 | 0.06 | 1.0e-02 | -4.888 | 6.5 | 6.2e-11 | -0.02 | 0.04 | 0.73 | FALSE |
39 | GTEx | Lung | LPAR2 | 0.07 | 0.09 | lasso | 3 | 0.05 | 9.9e-05 | 8.820 | -8.4 | 3.3e-17 | -0.74 | 0.63 | 0.29 | FALSE |
40 | GTEx | Lung | MEF2B | 0.10 | 0.08 | lasso | 9 | 0.05 | 6.4e-05 | -6.158 | 6.0 | 1.8e-09 | 0.11 | 0.79 | 0.04 | FALSE |
41 | GTEx | Muscle Skeletal | SUGP1 | 0.11 | 0.06 | lasso | 7 | 0.07 | 9.5e-08 | 12.502 | -9.8 | 1.1e-22 | -0.94 | 0.04 | 0.96 | FALSE |
42 | GTEx | Muscle Skeletal | MAU2 | 0.09 | 0.04 | lasso | 4 | 0.05 | 5.1e-06 | -11.659 | 6.7 | 2.0e-11 | -0.22 | 0.54 | 0.46 | FALSE |
43 | GTEx | Muscle Skeletal | SSBP4 | 0.09 | 0.07 | lasso | 3 | 0.07 | 1.3e-07 | -9.671 | 10.1 | 6.5e-24 | 0.03 | 0.04 | 0.96 | FALSE |
44 | GTEx | Nerve Tibial | LPAR2 | 0.14 | 0.05 | lasso | 5 | 0.06 | 2.3e-05 | 8.820 | -7.6 | 2.2e-14 | -0.69 | 0.69 | 0.07 | FALSE |
45 | GTEx | Nerve Tibial | ANKLE1 | 0.16 | 0.16 | lasso | 3 | 0.15 | 4.5e-11 | -5.573 | -5.6 | 2.2e-08 | 0.00 | 1.00 | 0.00 | FALSE |
46 | GTEx | Nerve Tibial | MEF2B | 0.13 | 0.10 | lasso | 3 | 0.08 | 2.0e-06 | -6.158 | 7.0 | 3.4e-12 | 0.15 | 0.74 | 0.12 | FALSE |
47 | GTEx | Prostate | ZNF682 | 0.61 | 0.00 | lasso | 17 | 0.00 | 3.9e-01 | -3.930 | -5.9 | 2.9e-09 | -0.08 | 0.03 | 0.06 | FALSE |
48 | GTEx | Skin Not Sun Exposed Suprapubic | MEF2B | 0.13 | 0.15 | lasso | 2 | 0.15 | 1.6e-08 | -6.133 | 6.2 | 7.2e-10 | 0.12 | 0.96 | 0.01 | FALSE |
49 | GTEx | Skin Sun Exposed Lower leg | SSBP4 | 0.12 | 0.12 | lasso | 3 | 0.11 | 2.9e-09 | -9.658 | 9.7 | 3.7e-22 | 0.02 | 0.03 | 0.97 | FALSE |
50 | GTEx | Skin Sun Exposed Lower leg | ANKLE1 | 0.14 | 0.05 | lasso | 6 | 0.07 | 9.4e-07 | -5.573 | -5.4 | 7.8e-08 | 0.01 | 0.96 | 0.00 | FALSE |
51 | GTEx | Skin Sun Exposed Lower leg | MEF2B | 0.19 | 0.13 | lasso | 5 | 0.11 | 2.3e-09 | -6.186 | 6.3 | 2.8e-10 | 0.13 | 1.00 | 0.00 | FALSE |
52 | GTEx | Spleen | LPAR2 | 0.27 | 0.06 | lasso | 6 | 0.04 | 2.7e-02 | 4.944 | -9.5 | 1.5e-21 | -0.76 | 0.05 | 0.62 | FALSE |
53 | GTEx | Thyroid | SSBP4 | 0.09 | 0.11 | lasso | 6 | 0.10 | 8.2e-08 | -9.757 | 9.4 | 4.9e-21 | 0.02 | 0.04 | 0.96 | FALSE |
54 | GTEx | Thyroid | ANKLE1 | 0.10 | 0.03 | lasso | 5 | 0.02 | 5.9e-03 | -5.573 | -6.6 | 3.7e-11 | 0.02 | 0.20 | 0.03 | FALSE |
55 | GTEx | Thyroid | MEF2B | 0.15 | 0.16 | lasso | 1 | 0.16 | 5.1e-12 | -6.158 | 6.2 | 7.4e-10 | 0.14 | 1.00 | 0.00 | FALSE |
56 | GTEx | Thyroid | YJEFN3 | 0.05 | 0.02 | lasso | 3 | 0.02 | 1.2e-02 | 12.531 | -10.5 | 1.3e-25 | -0.87 | 0.03 | 0.87 | FALSE |
57 | GTEx | Vagina | ZNF93 | 0.21 | 0.05 | lasso | 6 | 0.07 | 9.7e-03 | -4.177 | -6.2 | 6.2e-10 | -0.02 | 0.10 | 0.10 | FALSE |
58 | GTEx | Vagina | CTC-559E9.5 | 0.25 | 0.08 | lasso | 2 | 0.09 | 5.0e-03 | 3.202 | -5.3 | 1.2e-07 | -0.29 | 0.04 | 0.09 | FALSE |
59 | GTEx | Whole Blood | LPAR2 | 0.10 | 0.07 | lasso | 5 | 0.07 | 8.0e-07 | 8.820 | -10.8 | 3.2e-27 | -0.83 | 0.19 | 0.81 | FALSE |
60 | GTEx | Whole Blood | ELL | 0.10 | 0.03 | enet | 17 | 0.04 | 1.2e-04 | -9.757 | -8.3 | 7.3e-17 | 0.01 | 0.02 | 0.98 | FALSE |
61 | GTEx | Whole Blood | LRRC25 | 0.12 | 0.01 | enet | 7 | 0.02 | 1.0e-02 | -9.772 | 7.6 | 3.9e-14 | 0.04 | 0.04 | 0.94 | FALSE |
62 | GTEx | Whole Blood | MEF2B | 0.12 | 0.09 | enet | 9 | 0.11 | 1.5e-10 | -6.622 | 6.7 | 1.6e-11 | 0.15 | 1.00 | 0.00 | FALSE |
63 | METSIM | Adipose | CCDC124 | 0.10 | 0.05 | bslmm | 438 | 0.05 | 4.4e-08 | -0.057 | -5.6 | 2.7e-08 | 0.01 | 1.00 | 0.00 | FALSE |
64 | METSIM | Adipose | CILP2 | 0.04 | 0.03 | lasso | 5 | 0.07 | 2.7e-11 | 3.459 | 5.8 | 5.0e-09 | 0.63 | 0.13 | 0.86 | FALSE |
65 | METSIM | Adipose | CTD-2521M24.9 | 0.09 | 0.07 | lasso | 3 | 0.06 | 9.8e-10 | -7.458 | 7.7 | 1.2e-14 | -0.05 | 1.00 | 0.00 | FALSE |
66 | METSIM | Adipose | ELL | 0.08 | 0.05 | lasso | 7 | 0.06 | 7.1e-09 | -10.157 | -10.6 | 2.4e-26 | -0.03 | 0.01 | 0.99 | TRUE |
67 | METSIM | Adipose | FCHO1 | 0.05 | 0.03 | lasso | 3 | 0.04 | 2.1e-06 | -4.904 | 5.7 | 9.6e-09 | 0.10 | 0.95 | 0.00 | TRUE |
68 | METSIM | Adipose | GMIP | 0.07 | 0.03 | lasso | 4 | 0.03 | 7.8e-05 | 3.976 | -6.3 | 2.1e-10 | -0.38 | 0.48 | 0.08 | FALSE |
69 | METSIM | Adipose | OCEL1 | 0.04 | 0.03 | enet | 8 | 0.04 | 6.9e-07 | -7.473 | -6.8 | 7.5e-12 | 0.05 | 0.62 | 0.02 | TRUE |
70 | METSIM | Adipose | PLVAP | 0.06 | 0.02 | blup | 453 | 0.03 | 1.9e-05 | -3.055 | 5.3 | 9.2e-08 | 0.06 | 0.89 | 0.01 | FALSE |
71 | NTR | Blood | ATP13A1 | 0.01 | 0.01 | blup | 339 | 0.01 | 1.9e-04 | -3.611 | -5.5 | 3.7e-08 | 0.26 | 0.08 | 0.09 | FALSE |
72 | NTR | Blood | DDA1 | 0.03 | 0.00 | bslmm | 434 | 0.01 | 8.4e-05 | 4.626 | -5.2 | 2.5e-07 | 0.07 | 0.47 | 0.01 | FALSE |
73 | NTR | Blood | LPAR2 | 0.04 | 0.03 | lasso | 3 | 0.03 | 3.6e-11 | 8.820 | -8.8 | 1.5e-18 | -0.67 | 0.98 | 0.02 | FALSE |
74 | ROSMAP | Brain Pre-frontal Cortex | ELL | 0.27 | 0.39 | lasso | 7 | 0.39 | 4.0e-53 | -10.073 | 10.0 | 1.2e-23 | 0.02 | 0.01 | 0.99 | FALSE |
75 | ROSMAP | Brain Pre-frontal Cortex | SUGP1 | 0.03 | 0.00 | blup | 364 | 0.01 | 4.3e-02 | -12.721 | -8.5 | 2.1e-17 | -0.05 | 0.03 | 0.74 | FALSE |
76 | ROSMAP | Brain Pre-frontal Cortex | ATP13A1 | 0.10 | 0.07 | lasso | 5 | 0.06 | 1.3e-08 | -5.303 | 6.6 | 5.1e-11 | 0.08 | 0.99 | 0.00 | TRUE |
77 | ROSMAP | Brain Pre-frontal Cortex | ABHD8 | 0.13 | 0.05 | blup | 425 | 0.05 | 1.3e-07 | -6.635 | 6.5 | 1.0e-10 | 0.00 | 0.93 | 0.00 | FALSE |
78 | ROSMAP | Brain Pre-frontal Cortex | MAU2 | 0.17 | 0.05 | bslmm | 362 | 0.06 | 8.0e-08 | -7.390 | 7.6 | 2.4e-14 | 0.07 | 0.78 | 0.08 | FALSE |
79 | ROSMAP | Brain Pre-frontal Cortex | TSSK6 | 0.04 | 0.00 | blup | 346 | 0.01 | 1.1e-02 | 12.059 | 8.1 | 5.9e-16 | 0.78 | 0.03 | 0.92 | FALSE |
80 | ROSMAP | Brain Pre-frontal Cortex | HAPLN4 | 0.05 | 0.03 | enet | 15 | 0.03 | 1.7e-04 | 5.259 | 9.2 | 2.2e-20 | 0.80 | 0.05 | 0.95 | FALSE |
81 | YFS | Blood | BST2 | 0.02 | 0.01 | enet | 27 | 0.02 | 4.4e-06 | -8.148 | 5.5 | 3.9e-08 | -0.04 | 0.83 | 0.01 | FALSE |
82 | YFS | Blood | ELL | 0.23 | 0.41 | enet | 24 | 0.43 | 2.6e-158 | -9.775 | -8.9 | 6.3e-19 | -0.02 | 0.05 | 0.95 | FALSE |
83 | YFS | Blood | GMIP | 0.10 | 0.06 | enet | 37 | 0.08 | 9.6e-24 | -4.394 | 7.0 | 3.6e-12 | 0.50 | 1.00 | 0.00 | FALSE |
84 | YFS | Blood | LPAR2 | 0.14 | 0.15 | lasso | 5 | 0.16 | 3.6e-48 | 8.876 | -8.4 | 5.1e-17 | -0.68 | 1.00 | 0.00 | FALSE |
85 | YFS | Blood | PLVAP | 0.02 | 0.01 | blup | 422 | 0.01 | 3.1e-03 | 4.291 | 6.2 | 6.9e-10 | 0.00 | 0.12 | 0.02 | TRUE |
86 | YFS | Blood | ZNF101 | 0.02 | 0.00 | enet | 16 | 0.01 | 2.7e-03 | -6.848 | -10.3 | 7.8e-25 | -0.38 | 0.15 | 0.05 | FALSE |
87 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ARRDC2 | 0.05 | 0.02 | blup | 46 | 0.02 | 5.0e-03 | 3.884 | -5.9 | 2.8e-09 | -0.03 | 0.06 | 0.05 | TRUE |
88 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ISYNA1 | 0.05 | 0.03 | enet | 8 | 0.03 | 2.3e-03 | 3.506 | -5.2 | 2.4e-07 | 0.02 | 0.03 | 0.11 | FALSE |
89 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | YJEFN3 | 0.04 | 0.05 | lasso | 7 | 0.04 | 1.6e-04 | 12.612 | -10.9 | 7.1e-28 | -0.97 | 0.01 | 0.97 | FALSE |
90 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CILP2 | 0.02 | 0.02 | blup | 30 | 0.02 | 1.6e-04 | 12.644 | 11.9 | 1.6e-32 | 0.97 | 0.01 | 0.96 | FALSE |
91 | The Cancer Genome Atlas | Breast Invasive Carcinoma | HAPLN4 | 0.04 | 0.07 | lasso | 4 | 0.06 | 1.3e-12 | 12.698 | 10.6 | 4.5e-26 | 0.93 | 0.00 | 1.00 | FALSE |
92 | The Cancer Genome Atlas | Breast Invasive Carcinoma | LOC729991 | 0.01 | 0.00 | lasso | 4 | 0.00 | 1.1e-01 | -6.158 | 5.6 | 2.2e-08 | 0.10 | 0.03 | 0.04 | FALSE |
93 | The Cancer Genome Atlas | Breast Invasive Carcinoma | LOC729991-MEF2B | 0.05 | 0.01 | blup | 67 | 0.02 | 3.6e-05 | -6.158 | -6.8 | 8.4e-12 | -0.18 | 0.46 | 0.40 | FALSE |
94 | The Cancer Genome Atlas | Breast Invasive Carcinoma | LRRC25 | 0.06 | 0.07 | enet | 13 | 0.06 | 5.9e-13 | -4.145 | 5.2 | 2.5e-07 | 0.05 | 1.00 | 0.00 | FALSE |
95 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MAP1S | 0.02 | 0.00 | blup | 45 | 0.01 | 4.7e-03 | -4.664 | 6.1 | 8.6e-10 | 0.16 | 0.01 | 0.58 | FALSE |
96 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MEF2B | 0.05 | 0.01 | blup | 61 | 0.03 | 3.2e-06 | -6.186 | 5.2 | 2.5e-07 | 0.16 | 0.01 | 0.99 | FALSE |
97 | The Cancer Genome Atlas | Breast Invasive Carcinoma | YJEFN3 | 0.03 | 0.02 | enet | 18 | 0.02 | 2.1e-04 | 12.612 | -8.9 | 5.8e-19 | -0.71 | 0.01 | 0.97 | FALSE |
98 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ZNF14 | 0.03 | 0.02 | lasso | 2 | 0.02 | 2.1e-05 | -4.887 | -6.7 | 3.0e-11 | -0.33 | 0.34 | 0.42 | FALSE |
99 | The Cancer Genome Atlas | Colon Adenocarcinoma | GATAD2A | 0.04 | 0.03 | blup | 61 | 0.05 | 1.3e-03 | -0.359 | 5.8 | 5.4e-09 | 0.87 | 0.06 | 0.69 | FALSE |
100 | The Cancer Genome Atlas | Colon Adenocarcinoma | GTPBP3 | 0.27 | 0.11 | enet | 15 | 0.12 | 1.1e-07 | 5.677 | 5.5 | 3.1e-08 | -0.06 | 0.45 | 0.05 | FALSE |
101 | The Cancer Genome Atlas | Colon Adenocarcinoma | HAPLN4 | 0.10 | 0.08 | blup | 38 | 0.11 | 8.5e-07 | 0.700 | 7.2 | 8.8e-13 | 0.83 | 0.04 | 0.96 | FALSE |
102 | The Cancer Genome Atlas | Colon Adenocarcinoma | LRRC25 | 0.06 | 0.05 | blup | 44 | 0.04 | 1.5e-03 | -9.671 | 8.0 | 1.8e-15 | -0.03 | 0.01 | 0.92 | FALSE |
103 | The Cancer Genome Atlas | Colon Adenocarcinoma | SSBP4 | 0.08 | 0.05 | enet | 9 | 0.07 | 6.7e-05 | -9.905 | 6.8 | 9.4e-12 | 0.00 | 0.01 | 0.96 | FALSE |
104 | The Cancer Genome Atlas | Colon Adenocarcinoma | TSSK6 | 0.07 | 0.02 | blup | 32 | 0.04 | 2.9e-03 | 12.482 | 16.0 | 1.2e-57 | 0.89 | 0.01 | 0.81 | TRUE |
105 | The Cancer Genome Atlas | Glioblastoma Multiforme | ELL | 0.13 | 0.10 | blup | 46 | 0.08 | 1.9e-03 | -10.042 | 9.0 | 3.2e-19 | 0.01 | 0.02 | 0.88 | FALSE |
106 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | HAPLN4 | 0.07 | 0.05 | lasso | 7 | 0.07 | 2.9e-08 | 12.473 | 8.5 | 2.0e-17 | 0.89 | 0.01 | 0.99 | FALSE |
107 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SSBP4 | 0.04 | 0.03 | blup | 37 | 0.04 | 1.6e-05 | -10.042 | 8.0 | 1.6e-15 | 0.03 | 0.01 | 0.99 | FALSE |
108 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | GMIP | 0.03 | 0.02 | lasso | 4 | 0.02 | 3.2e-03 | 8.820 | 6.1 | 1.3e-09 | 0.68 | 0.02 | 0.66 | FALSE |
109 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SSBP4 | 0.02 | 0.02 | blup | 37 | 0.03 | 3.7e-04 | -9.775 | 8.6 | 7.0e-18 | 0.01 | 0.02 | 0.92 | FALSE |
110 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TM6SF2 | 0.04 | 0.03 | blup | 35 | 0.03 | 2.5e-04 | -11.474 | -12.2 | 2.4e-34 | -0.22 | 0.39 | 0.02 | FALSE |
111 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SSBP4 | 0.06 | 0.07 | enet | 6 | 0.07 | 5.6e-05 | -9.775 | 8.8 | 9.6e-19 | 0.01 | 0.02 | 0.98 | FALSE |
112 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LRRC25 | 0.07 | 0.08 | blup | 46 | 0.09 | 2.2e-10 | -4.145 | 7.4 | 1.1e-13 | 0.05 | 0.26 | 0.74 | FALSE |
113 | The Cancer Genome Atlas | Lung Adenocarcinoma | LOC729991-MEF2B | 0.08 | 0.05 | blup | 67 | 0.03 | 6.5e-05 | 2.308 | -5.3 | 9.9e-08 | -0.15 | 0.77 | 0.16 | FALSE |
114 | The Cancer Genome Atlas | Lung Adenocarcinoma | LRRC25 | 0.04 | 0.01 | blup | 45 | 0.02 | 6.2e-04 | -4.145 | 6.0 | 1.8e-09 | 0.05 | 0.03 | 0.93 | FALSE |
115 | The Cancer Genome Atlas | Lung Adenocarcinoma | YJEFN3 | 0.03 | 0.03 | blup | 32 | 0.02 | 3.0e-03 | 12.482 | -15.1 | 9.0e-52 | -0.94 | 0.01 | 0.91 | FALSE |
116 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | C19orf62 | 0.03 | 0.01 | blup | 60 | 0.01 | 1.9e-02 | -5.573 | 6.0 | 1.6e-09 | 0.02 | 0.04 | 0.07 | FALSE |
117 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | LRRC25 | 0.06 | 0.02 | blup | 46 | 0.04 | 5.6e-05 | -3.827 | 6.6 | 3.1e-11 | 0.06 | 0.02 | 0.94 | FALSE |
118 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SSBP4 | 0.02 | 0.03 | lasso | 2 | 0.03 | 5.3e-04 | -4.957 | 6.2 | 6.6e-10 | -0.02 | 0.04 | 0.74 | FALSE |
119 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | GMIP | 0.07 | 0.00 | blup | 43 | 0.02 | 2.3e-02 | 3.385 | -5.4 | 8.6e-08 | 0.26 | 0.02 | 0.11 | FALSE |
120 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | LRRC25 | 0.07 | 0.03 | blup | 46 | 0.02 | 8.5e-03 | -3.827 | 6.5 | 7.2e-11 | 0.02 | 0.01 | 0.76 | TRUE |
121 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SSBP4 | 0.06 | 0.02 | blup | 37 | 0.05 | 4.3e-04 | -9.987 | 8.8 | 1.8e-18 | 0.01 | 0.01 | 0.92 | FALSE |
122 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | LRRC25 | 0.12 | 0.03 | blup | 45 | 0.01 | 1.1e-01 | -4.145 | 5.3 | 9.5e-08 | 0.12 | 0.01 | 0.21 | FALSE |
123 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | TSSK6 | 0.35 | 0.01 | blup | 33 | 0.09 | 2.8e-04 | 0.655 | 8.5 | 2.8e-17 | 0.31 | 0.00 | 0.08 | TRUE |
124 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ELL | 0.03 | 0.03 | blup | 47 | 0.01 | 1.2e-02 | -10.073 | 9.2 | 3.4e-20 | 0.01 | 0.01 | 0.93 | FALSE |
125 | The Cancer Genome Atlas | Prostate Adenocarcinoma | GTPBP3 | 0.24 | 0.09 | lasso | 3 | 0.12 | 9.4e-13 | 5.677 | 7.8 | 7.6e-15 | -0.09 | 1.00 | 0.00 | FALSE |
126 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SSBP4 | 0.04 | 0.08 | enet | 13 | 0.08 | 8.4e-09 | -9.905 | 9.5 | 1.6e-21 | 0.01 | 0.01 | 0.99 | FALSE |
127 | The Cancer Genome Atlas | Prostate Adenocarcinoma | YJEFN3 | 0.04 | 0.05 | lasso | 2 | 0.05 | 4.3e-06 | 12.636 | -12.6 | 1.4e-36 | -1.00 | 0.01 | 0.99 | FALSE |
128 | The Cancer Genome Atlas | Soft Tissue Sarcoma | HAPLN4 | 0.11 | 0.01 | blup | 38 | 0.02 | 2.7e-02 | 12.473 | 8.6 | 1.0e-17 | 0.89 | 0.01 | 0.89 | FALSE |
129 | The Cancer Genome Atlas | Stomach Adenocarcinoma | HAPLN4 | 0.08 | 0.03 | blup | 37 | 0.04 | 7.2e-04 | 12.558 | 10.4 | 3.1e-25 | 0.82 | 0.01 | 0.98 | FALSE |
130 | The Cancer Genome Atlas | Stomach Adenocarcinoma | ISYNA1 | 0.05 | 0.04 | enet | 11 | 0.05 | 1.4e-04 | -5.085 | -6.7 | 2.7e-11 | 0.01 | 0.02 | 0.89 | FALSE |
131 | The Cancer Genome Atlas | Stomach Adenocarcinoma | OCEL1 | 0.18 | 0.08 | blup | 53 | 0.11 | 1.4e-08 | -5.573 | -6.7 | 3.0e-11 | 0.02 | 0.60 | 0.34 | FALSE |
132 | The Cancer Genome Atlas | Thyroid Carcinoma | ELL | 0.06 | 0.06 | blup | 46 | 0.09 | 1.2e-08 | -10.196 | 8.2 | 2.1e-16 | 0.00 | 0.01 | 0.99 | FALSE |
133 | The Cancer Genome Atlas | Thyroid Carcinoma | GTPBP3 | 0.18 | 0.05 | lasso | 3 | 0.05 | 1.9e-05 | 5.677 | 5.9 | 3.2e-09 | -0.02 | 0.54 | 0.02 | FALSE |
134 | The Cancer Genome Atlas | Thyroid Carcinoma | HAPLN4 | 0.08 | 0.06 | blup | 37 | 0.09 | 1.8e-09 | 1.945 | 6.6 | 3.5e-11 | 0.83 | 0.02 | 0.98 | FALSE |
135 | The Cancer Genome Atlas | Thyroid Carcinoma | ISYNA1 | 0.04 | 0.00 | blup | 34 | 0.02 | 4.8e-03 | -5.085 | -7.2 | 7.4e-13 | -0.03 | 0.03 | 0.83 | FALSE |
136 | The Cancer Genome Atlas | Thyroid Carcinoma | TM6SF2 | 0.05 | 0.04 | blup | 34 | 0.05 | 2.8e-05 | -11.474 | -11.0 | 2.6e-28 | -0.16 | 0.64 | 0.02 | FALSE |
137 | The Cancer Genome Atlas | Thyroid Carcinoma | YJEFN3 | 0.08 | 0.06 | blup | 33 | 0.08 | 7.1e-08 | 12.636 | -15.0 | 7.8e-51 | -0.94 | 0.01 | 0.99 | FALSE |