Best TWAS P=3.59e-97 · Best GWAS P=8.21e-97 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | ITGAX | 0.05 | 0.03 | enet | 7 | 0.05 | 3.9e-07 | 8.742 | -6.8 | 1.2e-11 | 0.01 | 0.02 | 0.95 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | PRSS36 | 0.14 | 0.09 | enet | 13 | 0.11 | 1.4e-13 | -2.655 | -5.4 | 6.1e-08 | -0.13 | 1.00 | 0.00 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | RNF40 | 0.14 | 0.15 | enet | 7 | 0.15 | 1.9e-17 | -6.882 | -6.7 | 1.6e-11 | -0.09 | 0.02 | 0.98 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | TUFM | 0.05 | 0.02 | blup | 181 | 0.02 | 5.6e-04 | -0.072 | -7.7 | 1.1e-14 | -0.53 | 0.66 | 0.12 | FALSE |
5 | GTEx | Adipose Subcutaneous | STX4 | 0.06 | 0.05 | lasso | 2 | 0.02 | 7.8e-03 | -6.140 | -5.6 | 2.3e-08 | -0.12 | 0.21 | 0.10 | FALSE |
6 | GTEx | Adipose Subcutaneous | RNF40 | 0.18 | 0.10 | lasso | 7 | 0.11 | 3.7e-09 | -7.010 | -7.8 | 4.3e-15 | -0.10 | 0.02 | 0.98 | FALSE |
7 | GTEx | Adipose Subcutaneous | ATXN2L | 0.06 | 0.02 | lasso | 4 | 0.02 | 9.7e-03 | 10.992 | 6.8 | 1.3e-11 | 0.47 | 0.22 | 0.28 | FALSE |
8 | GTEx | Adipose Subcutaneous | CCDC101 | 0.09 | 0.00 | enet | 7 | 0.01 | 1.1e-01 | 13.653 | -13.5 | 1.2e-41 | -0.36 | 0.12 | 0.22 | FALSE |
9 | GTEx | Adipose Subcutaneous | EIF3C | 0.12 | 0.04 | enet | 12 | 0.07 | 1.4e-06 | -9.315 | 5.3 | 1.2e-07 | -0.02 | 0.95 | 0.00 | FALSE |
10 | GTEx | Adipose Subcutaneous | RP11-1348G14.4 | 0.11 | 0.17 | lasso | 5 | 0.18 | 1.3e-14 | -0.497 | 6.6 | 3.2e-11 | 0.50 | 1.00 | 0.00 | FALSE |
11 | GTEx | Artery Aorta | TGFB1I1 | 0.13 | 0.01 | lasso | 6 | 0.02 | 4.5e-02 | -5.090 | -7.2 | 5.5e-13 | -0.09 | 0.24 | 0.25 | FALSE |
12 | GTEx | Artery Aorta | SULT1A1 | 0.06 | 0.05 | lasso | 1 | 0.01 | 7.3e-02 | 13.841 | -13.8 | 1.5e-43 | -0.39 | 0.07 | 0.23 | FALSE |
13 | GTEx | Artery Coronary | SH2B1 | 0.10 | 0.09 | lasso | 6 | 0.03 | 4.5e-02 | 13.653 | -12.6 | 3.1e-36 | -0.32 | 0.06 | 0.14 | FALSE |
14 | GTEx | Artery Coronary | TUFM | 0.14 | 0.02 | lasso | 3 | 0.00 | 2.4e-01 | 10.992 | -9.7 | 2.2e-22 | -0.53 | 0.10 | 0.21 | FALSE |
15 | GTEx | Artery Coronary | SULT1A2 | 0.11 | 0.05 | enet | 22 | 0.05 | 1.0e-02 | -0.389 | -9.4 | 3.6e-21 | -0.60 | 0.10 | 0.68 | TRUE |
16 | GTEx | Artery Coronary | RP11-1348G14.4 | 0.12 | 0.11 | lasso | 2 | 0.09 | 7.6e-04 | 13.653 | -10.5 | 5.8e-26 | -0.23 | 0.36 | 0.04 | FALSE |
17 | GTEx | Artery Coronary | RP11-231C14.6 | 0.17 | 0.05 | lasso | 4 | 0.03 | 3.4e-02 | 9.193 | -9.8 | 1.6e-22 | -0.46 | 0.01 | 0.76 | FALSE |
18 | GTEx | Artery Coronary | MIR4721 | 0.20 | 0.15 | lasso | 1 | 0.12 | 6.1e-05 | 10.992 | -11.0 | 4.2e-28 | -0.53 | 0.10 | 0.08 | FALSE |
19 | GTEx | Artery Tibial | RABEP2 | 0.11 | 0.00 | enet | 22 | 0.03 | 1.4e-03 | -9.315 | 6.6 | 5.1e-11 | 0.22 | 0.04 | 0.06 | FALSE |
20 | GTEx | Brain Cerebellar Hemisphere | TGFB1I1 | 0.32 | 0.23 | lasso | 5 | 0.22 | 2.9e-06 | -4.974 | -5.2 | 2.4e-07 | -0.11 | 0.46 | 0.04 | FALSE |
21 | GTEx | Brain Cerebellum | RNF40 | 0.24 | 0.16 | lasso | 5 | 0.13 | 9.7e-05 | -7.054 | -7.0 | 2.2e-12 | -0.10 | 0.02 | 0.92 | FALSE |
22 | GTEx | Brain Cerebellum | TGFB1I1 | 0.45 | 0.25 | lasso | 12 | 0.29 | 3.7e-09 | -4.974 | -5.9 | 4.5e-09 | -0.14 | 0.98 | 0.00 | FALSE |
23 | GTEx | Brain Cerebellum | RP11-24N18.1 | 0.25 | -0.01 | enet | 26 | 0.01 | 1.5e-01 | -0.893 | 10.4 | 3.0e-25 | 0.44 | 0.02 | 0.29 | FALSE |
24 | GTEx | Brain Cerebellum | RP11-345J4.5 | 0.25 | 0.03 | enet | 18 | 0.03 | 5.6e-02 | -8.890 | -7.7 | 1.9e-14 | -0.07 | 0.01 | 0.86 | FALSE |
25 | GTEx | Brain Cortex | LAT | 0.17 | 0.04 | lasso | 4 | 0.04 | 2.2e-02 | 0.373 | 5.8 | 8.6e-09 | 0.00 | 0.13 | 0.17 | FALSE |
26 | GTEx | Brain Hypothalamus | RP11-1348G14.4 | 0.16 | 0.12 | enet | 14 | 0.17 | 7.1e-05 | 10.992 | 7.3 | 3.7e-13 | 0.50 | 0.09 | 0.08 | FALSE |
27 | GTEx | Brain Nucleus accumbens basal ganglia | TUFM | 0.26 | 0.21 | enet | 10 | 0.18 | 1.3e-05 | -0.728 | -5.5 | 4.3e-08 | -0.46 | 0.30 | 0.26 | FALSE |
28 | GTEx | Brain Nucleus accumbens basal ganglia | SULT1A2 | 0.32 | 0.09 | lasso | 11 | 0.14 | 1.1e-04 | 0.902 | -8.2 | 3.5e-16 | -0.64 | 0.19 | 0.44 | FALSE |
29 | GTEx | Brain Putamen basal ganglia | TBX6 | 0.22 | -0.01 | lasso | 10 | -0.01 | 5.2e-01 | 2.673 | -5.4 | 7.7e-08 | 0.11 | 0.03 | 0.06 | FALSE |
30 | GTEx | Breast Mammary Tissue | STX1B | 0.08 | 0.00 | enet | 11 | 0.02 | 5.1e-02 | 2.325 | 5.2 | 1.5e-07 | -0.03 | 0.04 | 0.77 | FALSE |
31 | GTEx | Breast Mammary Tissue | RNF40 | 0.11 | 0.02 | lasso | 7 | 0.04 | 5.7e-03 | 4.868 | -7.6 | 3.5e-14 | -0.09 | 0.03 | 0.72 | FALSE |
32 | GTEx | Breast Mammary Tissue (Male) | AC002310.12 | 0.20 | 0.10 | lasso | 2 | 0.08 | 7.0e-03 | -5.322 | 5.9 | 2.8e-09 | 0.08 | 0.03 | 0.14 | FALSE |
33 | GTEx | Breast Mammary Tissue (Female) | EIF3C | 0.06 | 0.00 | lasso | 3 | 0.00 | 2.8e-01 | -1.209 | 6.3 | 2.2e-10 | 0.18 | 0.03 | 0.06 | FALSE |
34 | GTEx | Cells Transformed fibroblasts | RNF40 | 0.08 | 0.04 | lasso | 8 | 0.04 | 5.6e-04 | -6.864 | -5.8 | 5.3e-09 | -0.13 | 0.03 | 0.95 | FALSE |
35 | GTEx | Cells Transformed fibroblasts | RP11-231C14.4 | 0.04 | 0.01 | enet | 11 | 0.01 | 6.1e-02 | -2.217 | -5.5 | 4.9e-08 | 0.02 | 0.05 | 0.04 | FALSE |
36 | GTEx | Colon Transverse | RRN3P2 | 0.16 | 0.02 | lasso | 6 | 0.03 | 1.8e-02 | 0.172 | 8.6 | 1.2e-17 | 0.31 | 0.05 | 0.14 | FALSE |
37 | GTEx | Colon Transverse | MIR4721 | 0.14 | 0.05 | lasso | 3 | 0.04 | 8.0e-03 | 10.992 | -7.3 | 2.8e-13 | -0.48 | 0.34 | 0.10 | FALSE |
38 | GTEx | Esophagus Gastroesophageal Junction | SULT1A2 | 0.11 | 0.08 | enet | 32 | 0.09 | 4.3e-04 | 0.877 | -8.1 | 4.0e-16 | -0.61 | 0.24 | 0.26 | FALSE |
39 | GTEx | Esophagus Gastroesophageal Junction | RP11-1348G14.4 | 0.09 | 0.09 | lasso | 4 | 0.10 | 1.8e-04 | -0.497 | 5.3 | 9.1e-08 | 0.42 | 0.44 | 0.10 | FALSE |
40 | GTEx | Esophagus Mucosa | TUFM | 0.12 | 0.05 | lasso | 5 | 0.04 | 6.8e-04 | -0.523 | -6.3 | 2.5e-10 | -0.46 | 0.45 | 0.02 | FALSE |
41 | GTEx | Esophagus Muscularis | RNF40 | 0.16 | 0.10 | lasso | 1 | 0.08 | 1.3e-05 | -6.971 | -7.0 | 3.1e-12 | -0.10 | 0.02 | 0.96 | FALSE |
42 | GTEx | Esophagus Muscularis | CCDC101 | 0.07 | 0.07 | enet | 5 | 0.04 | 2.2e-03 | 13.841 | -13.6 | 3.1e-42 | -0.35 | 0.17 | 0.10 | FALSE |
43 | GTEx | Esophagus Muscularis | SULT1A1 | 0.10 | 0.09 | enet | 16 | 0.08 | 1.0e-05 | 13.653 | -10.6 | 1.9e-26 | -0.18 | 0.97 | 0.00 | FALSE |
44 | GTEx | Heart Atrial Appendage | SULT1A1 | 0.14 | 0.08 | enet | 13 | 0.09 | 5.5e-05 | 13.653 | -8.9 | 7.5e-19 | -0.14 | 0.78 | 0.02 | FALSE |
45 | GTEx | Heart Atrial Appendage | RP11-1348G14.4 | 0.32 | 0.30 | lasso | 3 | 0.26 | 7.3e-12 | 10.992 | 10.5 | 8.4e-26 | 0.53 | 1.00 | 0.00 | FALSE |
46 | GTEx | Heart Left Ventricle | EIF3C | 0.09 | 0.10 | lasso | 5 | 0.07 | 1.0e-04 | -8.834 | 8.5 | 2.7e-17 | 0.19 | 0.33 | 0.03 | FALSE |
47 | GTEx | Heart Left Ventricle | SULT1A1 | 0.16 | 0.11 | lasso | 4 | 0.09 | 1.2e-05 | 13.841 | -15.5 | 4.3e-54 | -0.49 | 0.21 | 0.61 | FALSE |
48 | GTEx | Heart Left Ventricle | RP11-1348G14.4 | 0.24 | 0.11 | enet | 11 | 0.15 | 3.5e-08 | 10.992 | 8.0 | 9.4e-16 | 0.46 | 0.92 | 0.01 | FALSE |
49 | GTEx | Lung | RNF40 | 0.19 | 0.01 | enet | 20 | 0.07 | 2.5e-06 | 3.989 | -7.1 | 1.3e-12 | -0.08 | 0.05 | 0.88 | FALSE |
50 | GTEx | Lung | TBX6 | 0.27 | 0.05 | enet | 20 | 0.16 | 6.3e-12 | -4.256 | -5.4 | 7.6e-08 | 0.03 | 0.89 | 0.02 | FALSE |
51 | GTEx | Lung | APOBR | 0.04 | 0.01 | enet | 5 | 0.00 | 2.3e-01 | 13.653 | -6.5 | 7.7e-11 | -0.09 | 0.12 | 0.04 | FALSE |
52 | GTEx | Lung | SULT1A1 | 0.07 | 0.09 | lasso | 3 | 0.07 | 8.6e-06 | 13.841 | -9.4 | 4.0e-21 | -0.17 | 0.99 | 0.00 | FALSE |
53 | GTEx | Lung | SULT1A2 | 0.09 | 0.02 | lasso | 5 | 0.03 | 3.0e-03 | 20.588 | -16.7 | 2.3e-62 | -0.92 | 0.02 | 0.88 | FALSE |
54 | GTEx | Muscle Skeletal | ARMC5 | 0.06 | 0.02 | lasso | 3 | 0.02 | 5.9e-03 | 7.455 | 7.0 | 3.0e-12 | 0.01 | 0.05 | 0.72 | FALSE |
55 | GTEx | Muscle Skeletal | CCDC101 | 0.12 | 0.08 | enet | 7 | 0.10 | 9.9e-10 | 13.653 | -7.2 | 6.8e-13 | -0.06 | 1.00 | 0.00 | FALSE |
56 | GTEx | Muscle Skeletal | TUFM | 0.16 | 0.08 | lasso | 4 | 0.12 | 4.0e-12 | 10.992 | -7.3 | 2.3e-13 | -0.45 | 0.98 | 0.01 | FALSE |
57 | GTEx | Muscle Skeletal | SULT1A1 | 0.10 | 0.04 | enet | 20 | 0.05 | 7.5e-06 | -0.717 | -6.1 | 9.4e-10 | -0.05 | 0.93 | 0.00 | FALSE |
58 | GTEx | Nerve Tibial | RNF40 | 0.13 | 0.08 | lasso | 5 | 0.09 | 8.1e-07 | -6.904 | -7.9 | 3.8e-15 | -0.09 | 0.02 | 0.98 | FALSE |
59 | GTEx | Nerve Tibial | EIF3C | 0.15 | 0.05 | lasso | 6 | 0.08 | 1.8e-06 | 0.492 | 6.5 | 8.1e-11 | 0.01 | 0.57 | 0.02 | FALSE |
60 | GTEx | Nerve Tibial | SULT1A1 | 0.17 | 0.09 | enet | 21 | 0.08 | 2.7e-06 | 0.266 | -8.7 | 4.8e-18 | -0.14 | 0.98 | 0.00 | FALSE |
61 | GTEx | Ovary | SULT1A1 | 0.13 | 0.00 | enet | 11 | 0.02 | 1.1e-01 | 13.653 | -10.7 | 9.8e-27 | -0.25 | 0.06 | 0.09 | FALSE |
62 | GTEx | Pancreas | YPEL3 | 0.19 | 0.14 | lasso | 6 | 0.18 | 5.7e-08 | -3.944 | -6.9 | 5.3e-12 | 0.00 | 0.63 | 0.27 | FALSE |
63 | GTEx | Pancreas | SULT1A1 | 0.12 | 0.13 | enet | 13 | 0.11 | 2.1e-05 | 4.748 | -7.3 | 2.0e-13 | -0.03 | 0.76 | 0.01 | FALSE |
64 | GTEx | Pancreas | EIF3CL | 0.31 | 0.06 | enet | 20 | 0.12 | 1.2e-05 | 19.502 | -10.1 | 6.1e-24 | -0.70 | 0.02 | 0.96 | FALSE |
65 | GTEx | Pituitary | RP11-1348G14.4 | 0.34 | 0.14 | lasso | 5 | 0.19 | 1.5e-05 | 10.992 | 8.1 | 5.1e-16 | 0.50 | 0.22 | 0.14 | FALSE |
66 | GTEx | Prostate | SULT1A1 | 0.18 | 0.13 | enet | 12 | 0.17 | 6.0e-05 | 0.902 | -5.4 | 5.4e-08 | 0.06 | 0.71 | 0.02 | FALSE |
67 | GTEx | Skin Not Sun Exposed Suprapubic | ZNF720 | 0.07 | 0.01 | lasso | 10 | 0.00 | 2.5e-01 | 7.475 | -7.3 | 2.3e-13 | -0.09 | 0.04 | 0.55 | FALSE |
68 | GTEx | Skin Sun Exposed Lower leg | FUS | 0.04 | 0.05 | lasso | 2 | 0.04 | 1.8e-04 | 7.492 | 7.5 | 5.5e-14 | 0.04 | 0.24 | 0.47 | FALSE |
69 | GTEx | Skin Sun Exposed Lower leg | TAOK2 | 0.11 | 0.00 | enet | 12 | 0.01 | 9.0e-02 | -6.087 | 5.1 | 2.8e-07 | 0.07 | 0.25 | 0.08 | FALSE |
70 | GTEx | Small Intestine Terminal Ileum | RP11-1348G14.4 | 0.16 | 0.08 | lasso | 4 | 0.06 | 1.8e-02 | 0.913 | 5.3 | 9.7e-08 | 0.54 | 0.10 | 0.40 | FALSE |
71 | GTEx | Spleen | COX6A2 | 0.19 | 0.01 | enet | 15 | 0.08 | 5.4e-03 | 8.742 | 8.0 | 8.9e-16 | 0.01 | 0.01 | 0.85 | FALSE |
72 | GTEx | Stomach | EIF3C | 0.11 | 0.07 | enet | 12 | 0.06 | 8.6e-04 | -0.253 | 5.7 | 1.6e-08 | -0.04 | 0.46 | 0.06 | FALSE |
73 | GTEx | Stomach | EIF3CL | 0.09 | 0.06 | lasso | 3 | 0.12 | 2.5e-06 | -8.834 | 5.8 | 6.4e-09 | -0.05 | 0.66 | 0.03 | FALSE |
74 | GTEx | Testis | COX6A2 | 0.28 | 0.07 | lasso | 7 | 0.06 | 1.1e-03 | 7.472 | 7.7 | 2.0e-14 | -0.03 | 0.01 | 0.98 | FALSE |
75 | GTEx | Testis | NUPR1 | 0.06 | 0.01 | enet | 19 | 0.02 | 2.8e-02 | -8.834 | -6.9 | 7.1e-12 | -0.06 | 0.12 | 0.04 | FALSE |
76 | GTEx | Testis | EIF3C | 0.09 | 0.05 | lasso | 4 | 0.08 | 2.3e-04 | -9.315 | 5.6 | 1.9e-08 | -0.01 | 0.41 | 0.03 | FALSE |
77 | GTEx | Testis | C16orf93 | 0.10 | 0.09 | lasso | 3 | 0.08 | 1.4e-04 | -6.971 | 7.1 | 1.7e-12 | 0.08 | 0.02 | 0.95 | FALSE |
78 | GTEx | Thyroid | RNF40 | 0.07 | 0.03 | lasso | 3 | 0.03 | 1.5e-03 | -7.054 | -6.6 | 3.3e-11 | -0.12 | 0.01 | 0.97 | FALSE |
79 | GTEx | Thyroid | C16orf93 | 0.17 | 0.18 | lasso | 4 | 0.18 | 1.6e-13 | -6.864 | 7.1 | 1.6e-12 | 0.10 | 0.02 | 0.98 | FALSE |
80 | GTEx | Thyroid | SULT1A1 | 0.20 | 0.16 | enet | 20 | 0.24 | 3.1e-18 | 0.877 | -6.7 | 1.9e-11 | -0.05 | 1.00 | 0.00 | FALSE |
81 | GTEx | Thyroid | SULT1A2 | 0.18 | 0.00 | enet | 26 | 0.00 | 2.9e-01 | 20.639 | -15.5 | 6.6e-54 | -0.72 | 0.02 | 0.93 | FALSE |
82 | GTEx | Uterus | TBX6 | 0.29 | 0.04 | lasso | 6 | 0.10 | 4.5e-03 | -4.299 | -5.1 | 3.1e-07 | 0.02 | 0.08 | 0.06 | FALSE |
83 | GTEx | Uterus | C16orf93 | 0.23 | 0.00 | lasso | 5 | 0.06 | 2.5e-02 | -6.904 | 5.3 | 1.2e-07 | 0.06 | 0.03 | 0.46 | FALSE |
84 | GTEx | Whole Blood | CLN3 | 0.10 | 0.00 | enet | 32 | 0.03 | 1.7e-03 | 13.653 | -6.2 | 4.9e-10 | -0.13 | 0.09 | 0.07 | FALSE |
85 | METSIM | Adipose | EIF3C | 0.29 | 0.13 | blup | 200 | 0.13 | 3.9e-19 | -0.350 | -5.5 | 3.0e-08 | -0.41 | 1.00 | 0.00 | TRUE |
86 | METSIM | Adipose | RNF40 | 0.12 | 0.07 | lasso | 4 | 0.07 | 1.1e-10 | -7.054 | -7.9 | 3.2e-15 | -0.11 | 0.01 | 0.99 | FALSE |
87 | METSIM | Adipose | RP11-1348G14.4 | 0.07 | 0.08 | blup | 182 | 0.07 | 3.2e-11 | -0.497 | 5.3 | 1.2e-07 | 0.50 | 1.00 | 0.00 | FALSE |
88 | METSIM | Adipose | SULT1A1 | 0.14 | 0.06 | bslmm | 182 | 0.08 | 1.6e-12 | 13.841 | -9.8 | 1.4e-22 | -0.34 | 1.00 | 0.00 | FALSE |
89 | METSIM | Adipose | SULT1A2 | 0.06 | 0.06 | bslmm | 181 | 0.05 | 1.2e-08 | -0.748 | -6.2 | 5.2e-10 | -0.54 | 1.00 | 0.00 | FALSE |
90 | NTR | Blood | ARMC5 | 0.02 | 0.00 | blup | 271 | 0.01 | 1.7e-04 | 5.350 | 6.8 | 8.5e-12 | 0.11 | 0.14 | 0.38 | FALSE |
91 | ROSMAP | Brain Pre-frontal Cortex | YPEL3 | 0.06 | 0.03 | blup | 209 | 0.04 | 1.9e-05 | -4.327 | -5.4 | 7.1e-08 | 0.01 | 0.96 | 0.00 | TRUE |
92 | ROSMAP | Brain Pre-frontal Cortex | QPRT | 0.32 | 0.17 | lasso | 8 | 0.26 | 5.5e-34 | 6.973 | 5.5 | 4.1e-08 | -0.03 | 0.03 | 0.97 | FALSE |
93 | ROSMAP | Brain Pre-frontal Cortex | RNF40 | 0.19 | 0.14 | bslmm | 201 | 0.15 | 2.7e-18 | -6.904 | -7.8 | 6.8e-15 | -0.08 | 0.02 | 0.98 | FALSE |
94 | ROSMAP | Brain Pre-frontal Cortex | ZNF689 | 0.06 | 0.06 | lasso | 3 | 0.06 | 1.8e-08 | -5.629 | 5.8 | 7.8e-09 | 0.14 | 0.34 | 0.66 | FALSE |
95 | ROSMAP | Brain Pre-frontal Cortex | NUPR1 | 0.05 | 0.04 | bslmm | 200 | 0.02 | 3.1e-04 | 13.841 | 7.4 | 1.4e-13 | 0.14 | 0.86 | 0.01 | FALSE |
96 | ROSMAP | Brain Pre-frontal Cortex | C16orf93 | 0.19 | 0.26 | lasso | 10 | 0.28 | 5.1e-36 | -6.904 | 6.7 | 2.3e-11 | 0.13 | 0.02 | 0.98 | FALSE |
97 | ROSMAP | Brain Pre-frontal Cortex | SULT1A1 | 0.24 | 0.22 | blup | 181 | 0.25 | 3.8e-32 | -0.522 | -6.6 | 3.2e-11 | -0.02 | 1.00 | 0.00 | FALSE |
98 | ROSMAP | Brain Pre-frontal Cortex | NPIPB9 | 0.07 | 0.05 | blup | 194 | 0.06 | 3.5e-08 | 10.992 | -9.4 | 4.8e-21 | -0.60 | 0.96 | 0.04 | FALSE |
99 | ROSMAP | Brain Pre-frontal Cortex | SULT1A2 | 0.13 | 0.09 | bslmm | 180 | 0.09 | 4.6e-11 | 19.502 | -15.3 | 1.5e-52 | -0.85 | 0.01 | 0.99 | FALSE |
100 | ROSMAP | Brain Pre-frontal Cortex | NPIPB6 | 0.14 | 0.12 | bslmm | 259 | 0.11 | 1.2e-13 | -9.315 | 8.7 | 3.9e-18 | 0.18 | 1.00 | 0.00 | FALSE |
101 | ROSMAP | Brain Pre-frontal Cortex | RP11-1348G14.1 | 0.03 | 0.01 | blup | 175 | 0.02 | 3.6e-03 | -8.642 | -12.8 | 8.9e-38 | -0.33 | 0.34 | 0.09 | FALSE |
102 | YFS | Blood | ARMC5 | 0.02 | 0.01 | enet | 22 | 0.01 | 4.6e-04 | 7.455 | 6.4 | 1.8e-10 | -0.03 | 0.28 | 0.65 | FALSE |
103 | YFS | Blood | CCDC101 | 0.18 | 0.28 | lasso | 2 | 0.28 | 1.4e-93 | 13.841 | -13.8 | 1.5e-43 | -0.39 | 1.00 | 0.00 | FALSE |
104 | YFS | Blood | CLN3 | 0.15 | 0.02 | bslmm | 207 | 0.07 | 2.0e-21 | 16.619 | -17.5 | 6.9e-69 | -0.70 | 0.01 | 0.99 | TRUE |
105 | YFS | Blood | PRR14 | 0.02 | 0.01 | blup | 184 | 0.01 | 2.0e-05 | -6.904 | 5.8 | 6.9e-09 | 0.10 | 0.02 | 0.97 | FALSE |
106 | YFS | Blood | QPRT | 0.07 | 0.04 | bslmm | 179 | 0.05 | 7.5e-15 | 7.159 | -7.4 | 1.3e-13 | 0.09 | 0.00 | 1.00 | TRUE |
107 | YFS | Blood | SULT1A2 | 0.28 | 0.02 | enet | 68 | 0.09 | 7.9e-28 | 20.880 | -7.9 | 2.6e-15 | -0.49 | 0.01 | 0.99 | FALSE |
108 | YFS | Blood | ZNF785 | 0.05 | 0.07 | lasso | 4 | 0.06 | 2.0e-20 | -6.661 | -7.2 | 8.7e-13 | -0.06 | 0.16 | 0.84 | FALSE |
109 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ITGAD | 0.07 | 0.04 | enet | 11 | 0.06 | 1.2e-11 | 8.648 | 7.3 | 2.1e-13 | -0.02 | 0.01 | 0.99 | FALSE |
110 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SLC5A2 | 0.02 | 0.01 | blup | 38 | 0.01 | 7.8e-04 | 7.455 | 7.9 | 2.3e-15 | 0.06 | 0.01 | 0.99 | FALSE |
111 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SULT1A1 | 0.08 | 0.06 | lasso | 3 | 0.07 | 6.6e-15 | 13.653 | -16.6 | 6.1e-62 | -0.54 | 1.00 | 0.00 | FALSE |
112 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SULT1A2 | 0.04 | 0.03 | lasso | 1 | 0.03 | 1.6e-06 | 19.502 | -19.5 | 1.1e-84 | -0.92 | 0.01 | 0.99 | FALSE |
113 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | TUFM | 0.09 | 0.04 | blup | 28 | 0.08 | 1.3e-04 | -0.350 | -5.7 | 9.3e-09 | -0.43 | 0.01 | 0.89 | FALSE |
114 | The Cancer Genome Atlas | Colon Adenocarcinoma | EIF3C | 0.09 | 0.03 | blup | 10 | 0.03 | 8.6e-03 | -9.315 | 5.7 | 1.1e-08 | 0.00 | 0.00 | 0.96 | FALSE |
115 | The Cancer Genome Atlas | Colon Adenocarcinoma | SLC5A2 | 0.05 | 0.03 | blup | 38 | 0.03 | 4.8e-03 | 7.475 | 7.5 | 8.6e-14 | 0.07 | 0.01 | 0.78 | FALSE |
116 | The Cancer Genome Atlas | Glioblastoma Multiforme | RNF40 | 0.15 | 0.01 | blup | 12 | 0.10 | 5.3e-04 | 5.027 | -7.7 | 1.7e-14 | -0.07 | 0.01 | 0.53 | FALSE |
117 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C16orf93 | 0.02 | 0.02 | blup | 11 | 0.02 | 1.5e-03 | -6.971 | 7.3 | 3.3e-13 | 0.12 | 0.00 | 0.72 | FALSE |
118 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CCDC101 | 0.05 | 0.03 | enet | 12 | 0.01 | 7.8e-03 | 13.653 | -15.5 | 3.3e-54 | -0.50 | 0.04 | 0.21 | FALSE |
119 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | RNF40 | 0.06 | 0.02 | enet | 4 | 0.03 | 6.0e-04 | -7.010 | -7.5 | 5.0e-14 | -0.05 | 0.00 | 0.86 | FALSE |
120 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SULT1A1 | 0.07 | 0.01 | blup | 26 | 0.04 | 1.0e-05 | 13.653 | -20.7 | 1.5e-95 | -0.82 | 0.01 | 0.98 | FALSE |
121 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | C16orf93 | 0.14 | 0.11 | blup | 10 | 0.11 | 4.5e-07 | -6.971 | 6.6 | 3.0e-11 | 0.12 | 0.01 | 0.99 | FALSE |
122 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ITGAD | 0.13 | 0.08 | blup | 38 | 0.09 | 8.5e-06 | 8.742 | 7.0 | 2.3e-12 | 0.01 | 0.02 | 0.98 | FALSE |
123 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | RNF40 | 0.07 | 0.00 | blup | 11 | 0.02 | 2.8e-02 | 5.079 | -7.9 | 2.9e-15 | -0.06 | 0.00 | 0.26 | FALSE |
124 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SULT1A1 | 0.40 | 0.03 | enet | 4 | 0.07 | 9.4e-05 | 16.598 | -14.3 | 1.3e-46 | -0.52 | 0.02 | 0.25 | FALSE |
125 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SULT1A2 | 0.24 | 0.04 | blup | 35 | 0.06 | 4.0e-04 | 16.619 | -10.7 | 1.5e-26 | -0.70 | 0.02 | 0.68 | FALSE |
126 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C16orf93 | 0.09 | 0.09 | blup | 11 | 0.09 | 1.0e-10 | -7.054 | 6.1 | 9.4e-10 | 0.12 | 0.00 | 1.00 | FALSE |
127 | The Cancer Genome Atlas | Brain Lower Grade Glioma | NUPR1 | 0.03 | 0.03 | lasso | 4 | 0.04 | 4.8e-05 | 13.653 | 10.1 | 4.0e-24 | 0.19 | 0.46 | 0.03 | FALSE |
128 | The Cancer Genome Atlas | Brain Lower Grade Glioma | RNF40 | 0.09 | 0.08 | blup | 12 | 0.07 | 2.1e-08 | -6.971 | -8.5 | 1.8e-17 | -0.09 | 0.01 | 0.99 | TRUE |
129 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SULT1A1 | 0.08 | 0.05 | blup | 26 | 0.08 | 5.9e-09 | 13.653 | -13.8 | 2.9e-43 | -0.36 | 1.00 | 0.00 | FALSE |
130 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SULT1A2 | 0.03 | 0.03 | blup | 35 | 0.03 | 5.1e-04 | 0.266 | -6.3 | 3.5e-10 | -0.57 | 0.22 | 0.18 | FALSE |
131 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TGFB1I1 | 0.04 | 0.03 | enet | 10 | 0.03 | 1.3e-04 | -4.867 | -6.2 | 6.4e-10 | -0.11 | 0.16 | 0.73 | FALSE |
132 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TUFM | 0.07 | 0.02 | blup | 28 | 0.05 | 1.5e-06 | -0.350 | -5.2 | 2.5e-07 | -0.42 | 0.04 | 0.95 | FALSE |
133 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | CLN3 | 0.10 | 0.00 | blup | 19 | 0.02 | 4.2e-02 | 20.880 | -9.2 | 3.6e-20 | -0.65 | 0.00 | 0.59 | FALSE |
134 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | RABEP2 | 0.17 | 0.05 | blup | 30 | 0.07 | 3.6e-04 | 9.627 | -10.6 | 3.4e-26 | -0.46 | 0.00 | 0.95 | FALSE |
135 | The Cancer Genome Atlas | Lung Adenocarcinoma | SLC5A2 | 0.03 | 0.02 | lasso | 2 | 0.01 | 9.3e-03 | 5.350 | 5.3 | 8.6e-08 | 0.08 | 0.02 | 0.52 | FALSE |
136 | The Cancer Genome Atlas | Lung Adenocarcinoma | SULT1A1 | 0.10 | 0.03 | enet | 11 | 0.07 | 4.0e-08 | 13.653 | -11.7 | 2.1e-31 | -0.31 | 0.66 | 0.05 | TRUE |
137 | The Cancer Genome Atlas | Lung Adenocarcinoma | SULT1A2 | 0.06 | 0.02 | blup | 35 | 0.03 | 1.1e-04 | 13.653 | -20.9 | 3.6e-97 | -0.84 | 0.01 | 0.96 | TRUE |
138 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | RNF40 | 0.05 | 0.01 | enet | 5 | 0.02 | 2.8e-03 | -6.971 | -8.1 | 5.7e-16 | -0.04 | 0.00 | 0.53 | FALSE |
139 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SULT1A1 | 0.03 | 0.03 | lasso | 2 | 0.02 | 1.3e-03 | 13.653 | -14.8 | 2.2e-49 | -0.46 | 0.03 | 0.11 | FALSE |
140 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | CCDC101 | 0.08 | 0.01 | blup | 45 | 0.02 | 1.4e-02 | -2.438 | -7.4 | 1.7e-13 | -0.24 | 0.02 | 0.06 | FALSE |
141 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SULT1A1 | 0.07 | 0.07 | enet | 3 | 0.04 | 9.2e-04 | 13.653 | -14.3 | 2.3e-46 | -0.43 | 0.07 | 0.20 | FALSE |
142 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | RNF40 | 0.10 | 0.07 | lasso | 3 | 0.06 | 1.1e-03 | -7.010 | -7.2 | 4.8e-13 | -0.10 | 0.00 | 0.82 | FALSE |
143 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | CCDC101 | 0.13 | 0.01 | lasso | 11 | 0.02 | 5.5e-02 | 0.919 | 5.3 | 1.1e-07 | 0.44 | 0.03 | 0.11 | FALSE |
144 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ARMC5 | 0.04 | 0.02 | lasso | 5 | 0.02 | 2.8e-03 | 7.520 | 7.4 | 1.6e-13 | 0.05 | 0.15 | 0.11 | FALSE |
145 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C16orf58 | 0.04 | 0.03 | enet | 7 | 0.04 | 7.1e-05 | 4.898 | 5.8 | 6.7e-09 | 0.10 | 0.29 | 0.51 | FALSE |
146 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CCDC101 | 0.06 | 0.08 | lasso | 4 | 0.07 | 6.4e-08 | 13.653 | -11.1 | 8.6e-29 | -0.24 | 1.00 | 0.00 | FALSE |
147 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ITGAD | 0.06 | 0.07 | lasso | 2 | 0.06 | 3.7e-07 | 8.732 | 8.8 | 1.3e-18 | -0.03 | 0.01 | 0.99 | TRUE |
148 | The Cancer Genome Atlas | Prostate Adenocarcinoma | RNF40 | 0.07 | 0.11 | lasso | 5 | 0.10 | 7.5e-11 | -6.971 | -7.1 | 1.4e-12 | -0.10 | 0.01 | 0.99 | FALSE |
149 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SLC5A2 | 0.07 | 0.06 | enet | 15 | 0.09 | 7.1e-10 | 7.520 | 7.1 | 9.3e-13 | 0.08 | 0.02 | 0.98 | FALSE |
150 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SULT1A1 | 0.11 | 0.07 | lasso | 2 | 0.06 | 9.7e-07 | 13.653 | -12.6 | 1.5e-36 | -0.33 | 0.97 | 0.00 | TRUE |
151 | The Cancer Genome Atlas | Soft Tissue Sarcoma | SULT1A1 | 0.06 | 0.04 | blup | 26 | 0.04 | 1.6e-03 | 13.653 | -10.6 | 2.3e-26 | -0.20 | 0.04 | 0.05 | FALSE |
152 | The Cancer Genome Atlas | Soft Tissue Sarcoma | SULT1A2 | 0.06 | 0.02 | enet | 10 | 0.05 | 9.8e-04 | -0.072 | -12.5 | 1.3e-35 | -0.78 | 0.01 | 0.65 | FALSE |
153 | The Cancer Genome Atlas | Stomach Adenocarcinoma | AHSP | 0.06 | 0.08 | blup | 36 | 0.07 | 1.0e-05 | 5.350 | -5.8 | 7.5e-09 | -0.09 | 0.15 | 0.77 | FALSE |
154 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | AHSP | 0.17 | 0.20 | enet | 9 | 0.15 | 5.2e-06 | 4.898 | -5.3 | 1.0e-07 | -0.10 | 0.70 | 0.16 | FALSE |
155 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | PRR14 | 0.08 | 0.05 | blup | 10 | 0.02 | 5.6e-02 | -5.981 | 6.1 | 1.4e-09 | 0.13 | 0.00 | 0.43 | FALSE |
156 | The Cancer Genome Atlas | Thyroid Carcinoma | AHSP | 0.03 | 0.03 | lasso | 1 | 0.03 | 1.4e-03 | 5.350 | -5.3 | 8.8e-08 | -0.08 | 0.02 | 0.56 | FALSE |
157 | The Cancer Genome Atlas | Thyroid Carcinoma | C16orf93 | 0.15 | 0.19 | lasso | 4 | 0.19 | 1.8e-18 | -6.971 | 7.0 | 2.5e-12 | 0.11 | 0.01 | 0.99 | FALSE |
158 | The Cancer Genome Atlas | Thyroid Carcinoma | RNF40 | 0.06 | 0.04 | blup | 12 | 0.06 | 3.6e-06 | -6.971 | -8.3 | 1.2e-16 | -0.08 | 0.00 | 0.99 | FALSE |
159 | The Cancer Genome Atlas | Thyroid Carcinoma | SULT1A1 | 0.10 | 0.03 | blup | 26 | 0.04 | 3.8e-05 | 13.653 | -14.9 | 1.7e-50 | -0.48 | 0.14 | 0.07 | FALSE |
160 | The Cancer Genome Atlas | Thyroid Carcinoma | SULT1A2 | 0.10 | 0.03 | blup | 35 | 0.02 | 2.8e-03 | 20.619 | -19.2 | 7.7e-82 | -0.89 | 0.00 | 0.87 | TRUE |