Best TWAS P=2.67e-19 · Best GWAS P=4.07e-19 conditioned to 0.00898
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | FAM167A | 0.09 | 0.09 | lasso | 6 | 0.13 | 1.4e-15 | -3.9 | -6.2 | 4.3e-10 | -0.55 | 0.98 | 0.02 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | FAM86B1 | 0.02 | 0.02 | lasso | 3 | 0.01 | 1.3e-02 | 7.6 | 8.1 | 7.7e-16 | 0.61 | 0.01 | 0.98 | FALSE |
3 | CommonMind | Brain Pre-frontal Cortex | FAM90A25P | 0.11 | 0.08 | lasso | 3 | 0.08 | 1.4e-09 | 7.0 | 7.2 | 6.5e-13 | 0.56 | 0.04 | 0.96 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | LOC100506990 | 0.08 | 0.03 | enet | 32 | 0.05 | 4.1e-07 | 7.6 | 6.4 | 2.1e-10 | 0.52 | 0.01 | 0.99 | FALSE |
5 | GTEx | Adipose Subcutaneous | FDFT1 | 0.06 | 0.04 | lasso | 3 | 0.04 | 3.4e-04 | -6.0 | 7.0 | 3.5e-12 | 0.52 | 0.09 | 0.89 | FALSE |
6 | GTEx | Adipose Subcutaneous | ERI1 | 0.05 | 0.00 | enet | 10 | 0.00 | 5.5e-01 | 4.7 | -7.4 | 1.9e-13 | -0.62 | 0.22 | 0.35 | FALSE |
7 | GTEx | Adipose Subcutaneous | NEIL2 | 0.12 | 0.14 | enet | 19 | 0.14 | 3.3e-11 | 7.1 | 6.8 | 8.7e-12 | 0.38 | 0.09 | 0.91 | FALSE |
8 | GTEx | Adipose Subcutaneous | AF131215.2 | 0.24 | 0.15 | lasso | 7 | 0.14 | 3.5e-11 | -6.3 | 6.8 | 1.1e-11 | 0.58 | 0.96 | 0.04 | FALSE |
9 | GTEx | Adipose Subcutaneous | AF131215.9 | 0.20 | 0.12 | enet | 60 | 0.17 | 1.1e-13 | -6.3 | 5.9 | 3.8e-09 | 0.46 | 0.99 | 0.01 | FALSE |
10 | GTEx | Adipose Visceral Omentum | FAM86B3P | 0.23 | 0.07 | enet | 20 | 0.14 | 6.4e-08 | 6.8 | 5.8 | 5.3e-09 | 0.53 | 0.01 | 0.99 | FALSE |
11 | GTEx | Adipose Visceral Omentum | AF131215.2 | 0.12 | 0.08 | lasso | 6 | 0.06 | 4.6e-04 | 5.9 | 6.6 | 5.6e-11 | 0.61 | 0.59 | 0.33 | FALSE |
12 | GTEx | Adipose Visceral Omentum | AF131215.9 | 0.18 | 0.16 | lasso | 7 | 0.16 | 2.0e-08 | 5.9 | 6.7 | 2.7e-11 | 0.62 | 0.98 | 0.02 | FALSE |
13 | GTEx | Adrenal Gland | AF131215.2 | 0.20 | 0.16 | enet | 12 | 0.13 | 2.2e-05 | 6.4 | 7.0 | 1.8e-12 | 0.62 | 0.74 | 0.24 | FALSE |
14 | GTEx | Adrenal Gland | AF131215.9 | 0.18 | 0.16 | lasso | 10 | 0.18 | 3.5e-07 | 6.4 | 6.7 | 1.6e-11 | 0.65 | 0.86 | 0.12 | FALSE |
15 | GTEx | Artery Aorta | FDFT1 | 0.09 | 0.02 | lasso | 4 | 0.03 | 6.1e-03 | 6.0 | 8.6 | 9.6e-18 | 0.53 | 0.05 | 0.82 | FALSE |
16 | GTEx | Artery Aorta | ERI1 | 0.11 | 0.08 | lasso | 5 | 0.10 | 5.1e-06 | 7.0 | -7.3 | 2.0e-13 | -0.59 | 0.18 | 0.81 | FALSE |
17 | GTEx | Artery Aorta | NEIL2 | 0.30 | 0.14 | lasso | 7 | 0.19 | 1.7e-10 | 7.1 | 7.0 | 3.3e-12 | 0.32 | 0.12 | 0.88 | FALSE |
18 | GTEx | Artery Aorta | AF131215.2 | 0.09 | 0.09 | lasso | 7 | 0.08 | 2.0e-05 | -6.3 | 7.1 | 1.2e-12 | 0.63 | 0.24 | 0.74 | FALSE |
19 | GTEx | Artery Aorta | FAM85A | 0.11 | 0.06 | enet | 19 | 0.06 | 3.4e-04 | -7.4 | 6.5 | 8.8e-11 | 0.56 | 0.02 | 0.97 | FALSE |
20 | GTEx | Artery Aorta | AF131215.9 | 0.13 | 0.05 | lasso | 6 | 0.07 | 1.3e-04 | 6.2 | 6.7 | 1.7e-11 | 0.63 | 0.83 | 0.13 | FALSE |
21 | GTEx | Artery Coronary | AC087269.1 | 0.20 | 0.02 | enet | 29 | 0.02 | 8.7e-02 | 6.1 | -5.2 | 2.0e-07 | -0.44 | 0.14 | 0.14 | FALSE |
22 | GTEx | Artery Coronary | AF131215.2 | 0.11 | 0.02 | enet | 27 | 0.05 | 6.5e-03 | -5.1 | 7.2 | 6.7e-13 | 0.51 | 0.11 | 0.50 | FALSE |
23 | GTEx | Artery Tibial | FDFT1 | 0.14 | 0.17 | lasso | 4 | 0.16 | 1.1e-12 | -6.0 | 6.5 | 7.9e-11 | 0.47 | 0.99 | 0.01 | FALSE |
24 | GTEx | Artery Tibial | ERI1 | 0.05 | 0.02 | lasso | 7 | 0.01 | 3.2e-02 | 7.0 | -7.1 | 9.5e-13 | -0.60 | 0.22 | 0.60 | FALSE |
25 | GTEx | Artery Tibial | NEIL2 | 0.21 | 0.07 | enet | 18 | 0.13 | 2.8e-10 | 7.1 | 6.8 | 8.9e-12 | 0.37 | 0.14 | 0.86 | FALSE |
26 | GTEx | Artery Tibial | AF131215.2 | 0.07 | 0.03 | enet | 24 | 0.05 | 1.8e-04 | -5.7 | 5.5 | 3.0e-08 | 0.52 | 0.16 | 0.82 | FALSE |
27 | GTEx | Artery Tibial | FAM85A | 0.09 | 0.06 | enet | 18 | 0.08 | 1.5e-06 | -7.3 | 6.0 | 2.6e-09 | 0.48 | 0.02 | 0.97 | FALSE |
28 | GTEx | Brain Caudate basal ganglia | FAM85A | 0.18 | 0.02 | lasso | 7 | 0.03 | 4.2e-02 | -6.2 | 6.1 | 1.4e-09 | 0.51 | 0.03 | 0.59 | FALSE |
29 | GTEx | Brain Caudate basal ganglia | RP11-981G7.6 | 0.21 | 0.01 | enet | 17 | 0.12 | 2.3e-04 | 5.4 | 6.3 | 3.8e-10 | 0.66 | 0.06 | 0.71 | FALSE |
30 | GTEx | Brain Cerebellar Hemisphere | FAM86B3P | 0.28 | 0.27 | lasso | 8 | 0.28 | 5.4e-08 | 6.6 | -7.0 | 2.4e-12 | -0.61 | 0.02 | 0.98 | FALSE |
31 | GTEx | Brain Cerebellar Hemisphere | AF131215.2 | 0.15 | 0.17 | lasso | 3 | 0.09 | 3.0e-03 | -5.7 | 6.7 | 1.5e-11 | 0.55 | 0.19 | 0.37 | FALSE |
32 | GTEx | Brain Cerebellum | FAM86B3P | 0.19 | 0.14 | lasso | 5 | 0.16 | 1.8e-05 | 6.1 | -6.4 | 1.6e-10 | -0.61 | 0.05 | 0.95 | FALSE |
33 | GTEx | Brain Cortex | FAM86B3P | 0.14 | 0.05 | enet | 9 | 0.07 | 5.1e-03 | 5.5 | -6.7 | 1.7e-11 | -0.59 | 0.13 | 0.43 | FALSE |
34 | GTEx | Brain Frontal Cortex BA9 | FAM86B3P | 0.16 | 0.13 | enet | 27 | 0.10 | 1.1e-03 | 6.2 | -7.0 | 2.1e-12 | -0.55 | 0.03 | 0.93 | FALSE |
35 | GTEx | Breast Mammary Tissue | AF131215.2 | 0.16 | 0.15 | lasso | 6 | 0.12 | 1.1e-06 | -6.3 | 7.0 | 2.6e-12 | 0.65 | 0.58 | 0.38 | FALSE |
36 | GTEx | Breast Mammary Tissue | FAM85A | 0.14 | 0.04 | enet | 14 | 0.08 | 4.4e-05 | -7.4 | 6.2 | 6.3e-10 | 0.54 | 0.02 | 0.98 | FALSE |
37 | GTEx | Breast Mammary Tissue | AF131215.9 | 0.10 | 0.10 | lasso | 8 | 0.12 | 8.7e-07 | -6.7 | 7.4 | 1.2e-13 | 0.65 | 0.35 | 0.64 | FALSE |
38 | GTEx | Breast Mammary Tissue (Male) | AF131215.2 | 0.31 | 0.08 | enet | 23 | 0.03 | 5.9e-02 | -6.3 | 5.2 | 1.7e-07 | 0.52 | 0.12 | 0.20 | FALSE |
39 | GTEx | Breast Mammary Tissue (Male) | FAM85A | 0.14 | 0.03 | enet | 16 | 0.09 | 4.3e-03 | -7.3 | 7.1 | 9.9e-13 | 0.54 | 0.03 | 0.76 | FALSE |
40 | GTEx | Breast Mammary Tissue (Female) | AF131215.2 | 0.04 | -0.01 | lasso | 2 | 0.00 | 4.8e-01 | -6.7 | 6.1 | 9.5e-10 | 0.58 | 0.07 | 0.16 | FALSE |
41 | GTEx | Breast Mammary Tissue (Female) | AF131215.9 | 0.04 | -0.01 | enet | 6 | 0.02 | 7.3e-02 | -5.4 | 6.2 | 4.2e-10 | 0.62 | 0.08 | 0.18 | FALSE |
42 | GTEx | Cells EBV-transformed lymphocytes | NEIL2 | 0.45 | 0.11 | lasso | 6 | 0.13 | 4.8e-05 | 5.2 | 6.0 | 1.7e-09 | 0.33 | 0.21 | 0.30 | FALSE |
43 | GTEx | Cells EBV-transformed lymphocytes | AF131215.2 | 0.20 | 0.10 | enet | 14 | 0.11 | 1.5e-04 | -5.7 | 7.3 | 2.5e-13 | 0.60 | 0.43 | 0.49 | FALSE |
44 | GTEx | Cells EBV-transformed lymphocytes | AF131215.9 | 0.20 | 0.15 | enet | 19 | 0.13 | 5.6e-05 | -5.7 | 6.9 | 6.6e-12 | 0.57 | 0.48 | 0.35 | FALSE |
45 | GTEx | Cells Transformed fibroblasts | FDFT1 | 0.11 | 0.06 | lasso | 5 | 0.12 | 3.0e-09 | 4.4 | 5.9 | 3.9e-09 | 0.38 | 0.77 | 0.23 | FALSE |
46 | GTEx | Cells Transformed fibroblasts | ERI1 | 0.34 | 0.35 | lasso | 7 | 0.35 | 1.9e-27 | 7.0 | -7.5 | 8.3e-14 | -0.57 | 0.27 | 0.73 | FALSE |
47 | GTEx | Cells Transformed fibroblasts | NEIL2 | 0.23 | 0.08 | enet | 13 | 0.14 | 1.9e-10 | 5.2 | 5.5 | 3.6e-08 | 0.13 | 0.64 | 0.36 | TRUE |
48 | GTEx | Cells Transformed fibroblasts | FAM86B3P | 0.23 | 0.33 | lasso | 11 | 0.38 | 8.4e-30 | 5.9 | 6.7 | 2.2e-11 | 0.62 | 0.28 | 0.72 | FALSE |
49 | GTEx | Colon Sigmoid | AF131215.2 | 0.10 | 0.00 | enet | 7 | 0.02 | 5.0e-02 | 6.7 | 6.7 | 2.7e-11 | 0.65 | 0.19 | 0.27 | FALSE |
50 | GTEx | Colon Sigmoid | AF131215.9 | 0.11 | 0.17 | enet | 5 | 0.09 | 4.9e-04 | -5.7 | 6.3 | 3.0e-10 | 0.57 | 0.39 | 0.13 | FALSE |
51 | GTEx | Colon Transverse | FAM86B3P | 0.13 | 0.04 | lasso | 8 | 0.04 | 4.4e-03 | 6.1 | 6.2 | 5.2e-10 | 0.60 | 0.04 | 0.86 | FALSE |
52 | GTEx | Colon Transverse | AF131215.2 | 0.15 | 0.09 | enet | 32 | 0.07 | 3.1e-04 | 6.2 | 6.2 | 6.2e-10 | 0.54 | 0.22 | 0.72 | FALSE |
53 | GTEx | Colon Transverse | AF131215.9 | 0.12 | 0.14 | enet | 18 | 0.12 | 4.0e-06 | -5.7 | 6.2 | 5.8e-10 | 0.56 | 0.75 | 0.21 | FALSE |
54 | GTEx | Colon Transverse | RP11-375N15.2 | 0.09 | 0.10 | lasso | 5 | 0.07 | 2.4e-04 | 4.8 | 5.3 | 1.5e-07 | 0.46 | 0.73 | 0.08 | FALSE |
55 | GTEx | Esophagus Gastroesophageal Junction | MSRA | 0.11 | -0.01 | enet | 30 | -0.01 | 8.0e-01 | 8.4 | -7.3 | 2.1e-13 | -0.68 | 0.05 | 0.76 | FALSE |
56 | GTEx | Esophagus Gastroesophageal Junction | AF131215.2 | 0.13 | 0.06 | enet | 10 | 0.11 | 6.4e-05 | 5.4 | 5.6 | 1.9e-08 | 0.62 | 0.50 | 0.14 | FALSE |
57 | GTEx | Esophagus Mucosa | FAM86B3P | 0.22 | 0.17 | lasso | 8 | 0.19 | 1.7e-12 | 5.9 | 6.3 | 2.9e-10 | 0.61 | 0.20 | 0.80 | FALSE |
58 | GTEx | Esophagus Mucosa | AF131215.2 | 0.15 | 0.14 | enet | 15 | 0.18 | 4.3e-12 | -6.2 | 7.0 | 2.3e-12 | 0.60 | 0.96 | 0.04 | FALSE |
59 | GTEx | Esophagus Mucosa | AF131215.9 | 0.18 | 0.16 | lasso | 14 | 0.19 | 1.6e-12 | 6.5 | 7.1 | 9.0e-13 | 0.64 | 0.68 | 0.32 | FALSE |
60 | GTEx | Esophagus Muscularis | ERI1 | 0.12 | 0.09 | enet | 13 | 0.08 | 7.7e-06 | 5.7 | -7.8 | 8.4e-15 | -0.60 | 0.28 | 0.72 | FALSE |
61 | GTEx | Esophagus Muscularis | AF131215.2 | 0.10 | 0.08 | lasso | 5 | 0.09 | 2.3e-06 | -6.2 | 6.4 | 1.4e-10 | 0.56 | 0.72 | 0.26 | FALSE |
62 | GTEx | Esophagus Muscularis | FAM85A | 0.10 | 0.01 | enet | 20 | 0.04 | 2.7e-03 | -7.4 | 6.2 | 4.4e-10 | 0.48 | 0.02 | 0.96 | FALSE |
63 | GTEx | Esophagus Muscularis | AF131215.9 | 0.14 | 0.17 | enet | 16 | 0.17 | 1.6e-10 | -5.7 | 6.6 | 5.2e-11 | 0.60 | 0.89 | 0.11 | FALSE |
64 | GTEx | Heart Atrial Appendage | NEIL2 | 0.19 | 0.20 | lasso | 4 | 0.24 | 4.0e-11 | 6.8 | 6.7 | 2.3e-11 | 0.35 | 0.15 | 0.85 | FALSE |
65 | GTEx | Heart Atrial Appendage | AF131215.2 | 0.39 | 0.13 | enet | 26 | 0.21 | 6.6e-10 | -6.2 | 6.8 | 1.4e-11 | 0.58 | 0.52 | 0.48 | FALSE |
66 | GTEx | Heart Atrial Appendage | AF131215.9 | 0.24 | 0.17 | enet | 26 | 0.18 | 1.3e-08 | -6.2 | 6.1 | 9.6e-10 | 0.57 | 0.39 | 0.61 | FALSE |
67 | GTEx | Heart Left Ventricle | MFHAS1 | 0.15 | -0.01 | lasso | 3 | 0.00 | 2.2e-01 | -4.7 | 5.3 | 1.0e-07 | 0.38 | 0.15 | 0.15 | FALSE |
68 | GTEx | Heart Left Ventricle | AF131215.2 | 0.05 | 0.01 | enet | 11 | 0.01 | 1.5e-01 | 5.8 | 6.8 | 1.3e-11 | 0.63 | 0.37 | 0.21 | FALSE |
69 | GTEx | Heart Left Ventricle | AF131215.9 | 0.07 | 0.10 | enet | 8 | 0.10 | 9.4e-06 | -5.7 | 6.5 | 7.0e-11 | 0.58 | 0.72 | 0.20 | FALSE |
70 | GTEx | Lung | ERI1 | 0.13 | 0.07 | lasso | 6 | 0.09 | 2.7e-07 | -6.5 | -7.2 | 4.4e-13 | -0.61 | 0.24 | 0.76 | FALSE |
71 | GTEx | Lung | AC087269.1 | 0.20 | 0.19 | lasso | 9 | 0.18 | 4.8e-14 | 4.4 | -5.4 | 7.8e-08 | -0.44 | 1.00 | 0.00 | FALSE |
72 | GTEx | Lung | CLDN23 | 0.18 | 0.17 | lasso | 7 | 0.16 | 2.5e-12 | 4.4 | -5.3 | 1.0e-07 | -0.43 | 1.00 | 0.00 | FALSE |
73 | GTEx | Lung | AF131215.2 | 0.12 | 0.08 | lasso | 5 | 0.08 | 1.0e-06 | -5.7 | 6.0 | 2.6e-09 | 0.53 | 0.86 | 0.14 | FALSE |
74 | GTEx | Lung | AF131215.9 | 0.15 | 0.18 | lasso | 4 | 0.15 | 1.5e-11 | -5.7 | 5.9 | 3.1e-09 | 0.51 | 0.99 | 0.01 | FALSE |
75 | GTEx | Muscle Skeletal | MFHAS1 | 0.07 | 0.04 | lasso | 4 | 0.04 | 1.4e-04 | 4.5 | 6.4 | 2.0e-10 | 0.58 | 0.29 | 0.68 | FALSE |
76 | GTEx | Muscle Skeletal | NEIL2 | 0.11 | 0.08 | lasso | 5 | 0.05 | 4.7e-06 | 7.2 | 7.7 | 1.9e-14 | 0.43 | 0.06 | 0.94 | FALSE |
77 | GTEx | Muscle Skeletal | FAM86B1 | 0.09 | 0.02 | enet | 17 | 0.03 | 1.2e-03 | -2.2 | -5.6 | 2.0e-08 | -0.33 | 0.22 | 0.21 | FALSE |
78 | GTEx | Nerve Tibial | ERI1 | 0.07 | 0.01 | enet | 16 | 0.01 | 4.2e-02 | -6.3 | -7.3 | 3.0e-13 | -0.63 | 0.23 | 0.40 | FALSE |
79 | GTEx | Nerve Tibial | NEIL2 | 0.34 | 0.20 | lasso | 6 | 0.25 | 8.1e-18 | 7.1 | 7.4 | 1.6e-13 | 0.36 | 0.09 | 0.91 | FALSE |
80 | GTEx | Nerve Tibial | AF131215.2 | 0.19 | 0.18 | lasso | 12 | 0.23 | 3.5e-16 | -6.2 | 7.1 | 1.6e-12 | 0.60 | 0.92 | 0.08 | FALSE |
81 | GTEx | Nerve Tibial | AF131215.9 | 0.17 | 0.17 | lasso | 4 | 0.18 | 5.0e-13 | -5.7 | 6.2 | 7.2e-10 | 0.52 | 1.00 | 0.00 | FALSE |
82 | GTEx | Ovary | NEIL2 | 0.47 | 0.32 | lasso | 7 | 0.26 | 5.7e-07 | 7.1 | 7.2 | 4.6e-13 | 0.33 | 0.11 | 0.83 | FALSE |
83 | GTEx | Pancreas | ERI1 | 0.08 | 0.00 | enet | 16 | 0.04 | 6.6e-03 | 5.0 | -5.2 | 2.4e-07 | -0.54 | 0.10 | 0.55 | FALSE |
84 | GTEx | Pancreas | NEIL2 | 0.32 | 0.04 | lasso | 8 | 0.02 | 5.6e-02 | 6.9 | 6.8 | 1.0e-11 | 0.32 | 0.08 | 0.44 | FALSE |
85 | GTEx | Pancreas | AF131215.2 | 0.16 | 0.16 | enet | 17 | 0.15 | 9.1e-07 | -5.7 | 7.0 | 3.0e-12 | 0.61 | 0.92 | 0.08 | FALSE |
86 | GTEx | Pancreas | AF131215.9 | 0.25 | 0.24 | enet | 14 | 0.22 | 1.0e-09 | 6.2 | 6.8 | 9.9e-12 | 0.61 | 0.98 | 0.02 | FALSE |
87 | GTEx | Pituitary | FAM86B3P | 0.13 | 0.15 | lasso | 4 | 0.13 | 3.5e-04 | -6.1 | -6.5 | 7.9e-11 | -0.53 | 0.04 | 0.88 | FALSE |
88 | GTEx | Prostate | AF131215.2 | 0.18 | 0.02 | lasso | 6 | 0.02 | 9.6e-02 | 5.5 | 7.1 | 1.4e-12 | 0.57 | 0.11 | 0.30 | FALSE |
89 | GTEx | Skin Not Sun Exposed Suprapubic | AF131215.2 | 0.16 | 0.11 | enet | 21 | 0.20 | 3.9e-11 | -6.2 | 6.9 | 5.1e-12 | 0.61 | 0.96 | 0.04 | FALSE |
90 | GTEx | Skin Not Sun Exposed Suprapubic | AF131215.9 | 0.17 | 0.14 | lasso | 8 | 0.19 | 9.4e-11 | -5.7 | 6.6 | 4.0e-11 | 0.59 | 0.91 | 0.09 | FALSE |
91 | GTEx | Skin Sun Exposed Lower leg | MSRA | 0.10 | 0.02 | lasso | 4 | 0.01 | 8.5e-02 | 4.6 | -7.3 | 2.5e-13 | -0.64 | 0.24 | 0.48 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | AF131215.2 | 0.14 | 0.11 | lasso | 9 | 0.16 | 4.3e-13 | -6.2 | 6.9 | 4.2e-12 | 0.58 | 0.97 | 0.03 | FALSE |
93 | GTEx | Skin Sun Exposed Lower leg | AF131215.9 | 0.19 | 0.17 | enet | 29 | 0.21 | 3.9e-17 | -5.7 | 6.9 | 4.4e-12 | 0.61 | 0.93 | 0.07 | FALSE |
94 | GTEx | Small Intestine Terminal Ileum | AF131215.2 | 0.14 | 0.07 | lasso | 3 | 0.07 | 1.1e-02 | -5.5 | 6.0 | 2.3e-09 | 0.55 | 0.21 | 0.13 | FALSE |
95 | GTEx | Small Intestine Terminal Ileum | AF131215.9 | 0.14 | 0.11 | enet | 16 | 0.06 | 1.6e-02 | -6.0 | 7.0 | 2.9e-12 | 0.58 | 0.15 | 0.28 | FALSE |
96 | GTEx | Spleen | AF131215.2 | 0.16 | 0.08 | enet | 14 | 0.06 | 1.1e-02 | -5.7 | 6.1 | 1.2e-09 | 0.61 | 0.24 | 0.41 | FALSE |
97 | GTEx | Spleen | AF131215.9 | 0.34 | 0.23 | enet | 16 | 0.15 | 1.2e-04 | 6.1 | 5.3 | 9.9e-08 | 0.59 | 0.53 | 0.21 | FALSE |
98 | GTEx | Stomach | AF131215.9 | 0.14 | 0.06 | enet | 19 | 0.06 | 6.7e-04 | -5.7 | 5.9 | 2.8e-09 | 0.52 | 0.37 | 0.53 | FALSE |
99 | GTEx | Testis | FAM86B3P | 0.15 | 0.14 | lasso | 7 | 0.13 | 2.2e-06 | 5.5 | -6.2 | 4.3e-10 | -0.59 | 0.04 | 0.95 | FALSE |
100 | GTEx | Testis | SGK223 | 0.29 | 0.02 | enet | 19 | 0.07 | 3.5e-04 | 5.5 | -5.1 | 2.9e-07 | -0.47 | 0.21 | 0.21 | FALSE |
101 | GTEx | Testis | AF131215.2 | 0.28 | 0.18 | enet | 41 | 0.17 | 8.0e-08 | -6.2 | 6.3 | 2.6e-10 | 0.47 | 0.73 | 0.27 | FALSE |
102 | GTEx | Testis | AF131215.9 | 0.12 | 0.21 | lasso | 4 | 0.14 | 5.6e-07 | -6.2 | 6.2 | 5.2e-10 | 0.51 | 0.96 | 0.03 | FALSE |
103 | GTEx | Thyroid | NEIL2 | 0.14 | 0.08 | enet | 8 | 0.09 | 2.9e-07 | 6.9 | 7.0 | 2.8e-12 | 0.37 | 0.23 | 0.77 | FALSE |
104 | GTEx | Thyroid | SGK223 | 0.19 | 0.35 | enet | 16 | 0.36 | 1.1e-28 | 5.2 | -6.5 | 5.9e-11 | -0.64 | 1.00 | 0.00 | FALSE |
105 | GTEx | Thyroid | AF131215.2 | 0.11 | 0.15 | enet | 17 | 0.18 | 1.2e-13 | -6.2 | 6.9 | 5.1e-12 | 0.60 | 0.97 | 0.03 | FALSE |
106 | GTEx | Thyroid | AF131215.9 | 0.11 | 0.08 | enet | 16 | 0.17 | 4.7e-13 | -5.7 | 6.8 | 1.2e-11 | 0.59 | 0.93 | 0.07 | FALSE |
107 | GTEx | Uterus | AF131215.2 | 0.17 | 0.07 | enet | 13 | 0.09 | 7.1e-03 | 6.4 | 6.6 | 5.3e-11 | 0.64 | 0.07 | 0.74 | FALSE |
108 | GTEx | Uterus | AF131215.9 | 0.16 | -0.01 | enet | 18 | 0.03 | 7.5e-02 | 6.3 | 5.9 | 3.2e-09 | 0.57 | 0.09 | 0.62 | FALSE |
109 | GTEx | Vagina | AF131215.2 | 0.20 | 0.14 | lasso | 3 | 0.11 | 1.9e-03 | -5.9 | 5.3 | 9.3e-08 | 0.49 | 0.15 | 0.20 | FALSE |
110 | GTEx | Vagina | AF131215.9 | 0.21 | 0.11 | lasso | 9 | 0.08 | 6.3e-03 | 6.3 | 6.4 | 1.3e-10 | 0.60 | 0.24 | 0.54 | FALSE |
111 | GTEx | Whole Blood | NEIL2 | 0.09 | 0.01 | enet | 15 | 0.03 | 1.5e-03 | -4.9 | 6.6 | 5.0e-11 | 0.48 | 0.24 | 0.48 | FALSE |
112 | GTEx | Whole Blood | AF131215.9 | 0.16 | 0.00 | enet | 19 | 0.01 | 3.8e-02 | -5.4 | 5.8 | 6.6e-09 | 0.54 | 0.24 | 0.42 | FALSE |
113 | NTR | Blood | MFHAS1 | 0.02 | 0.01 | blup | 759 | 0.01 | 2.9e-04 | 6.8 | 7.3 | 2.3e-13 | 0.57 | 0.33 | 0.66 | FALSE |
114 | NTR | Blood | MSRA | 0.02 | 0.01 | blup | 833 | 0.01 | 2.3e-05 | 7.7 | -9.0 | 2.7e-19 | -0.72 | 0.12 | 0.88 | TRUE |
115 | NTR | Blood | NEIL2 | 0.04 | 0.03 | lasso | 5 | 0.02 | 3.0e-07 | 7.2 | 7.0 | 2.9e-12 | 0.34 | 0.06 | 0.94 | FALSE |
116 | NTR | Blood | PPP1R3B | 0.03 | 0.02 | enet | 11 | 0.02 | 1.5e-07 | 7.3 | 7.3 | 2.0e-13 | 0.38 | 0.02 | 0.98 | FALSE |
117 | ROSMAP | Brain Pre-frontal Cortex | MTMR9 | 0.07 | 0.06 | enet | 16 | 0.08 | 9.5e-11 | -6.0 | -6.3 | 2.2e-10 | -0.58 | 1.00 | 0.00 | FALSE |
118 | ROSMAP | Brain Pre-frontal Cortex | FAM167A | 0.12 | 0.03 | bslmm | 620 | 0.08 | 1.3e-10 | 2.7 | -5.9 | 2.9e-09 | -0.58 | 0.95 | 0.05 | FALSE |
119 | ROSMAP | Brain Pre-frontal Cortex | NEIL2 | 0.21 | 0.12 | lasso | 7 | 0.16 | 4.8e-20 | -4.3 | 5.5 | 4.6e-08 | 0.29 | 1.00 | 0.00 | FALSE |
120 | ROSMAP | Brain Pre-frontal Cortex | CTSB | 0.18 | 0.14 | bslmm | 413 | 0.17 | 3.0e-21 | 4.3 | -5.3 | 1.2e-07 | -0.39 | 1.00 | 0.00 | FALSE |
121 | ROSMAP | Brain Pre-frontal Cortex | XKR6 | 0.11 | 0.10 | enet | 23 | 0.13 | 1.2e-16 | -6.1 | 7.2 | 6.9e-13 | 0.62 | 0.68 | 0.32 | FALSE |
122 | ROSMAP | Brain Pre-frontal Cortex | FAM86B3P | 0.19 | 0.27 | bslmm | 331 | 0.27 | 5.6e-35 | 5.5 | -5.1 | 2.7e-07 | -0.48 | 0.88 | 0.12 | FALSE |
123 | ROSMAP | Brain Pre-frontal Cortex | SLC35G5 | 0.19 | 0.21 | enet | 37 | 0.19 | 1.0e-23 | -6.0 | -6.1 | 1.4e-09 | -0.55 | 1.00 | 0.00 | FALSE |
124 | ROSMAP | Brain Pre-frontal Cortex | SGK223 | 0.07 | 0.02 | blup | 427 | 0.05 | 4.3e-07 | 2.8 | 6.5 | 1.1e-10 | 0.49 | 0.18 | 0.82 | FALSE |
125 | ROSMAP | Brain Pre-frontal Cortex | FAM66A | 0.23 | 0.26 | enet | 29 | 0.30 | 4.7e-39 | 6.9 | 7.8 | 8.4e-15 | 0.54 | 0.09 | 0.91 | FALSE |
126 | ROSMAP | Brain Pre-frontal Cortex | RP11-62H7.2 | 0.36 | 0.35 | enet | 35 | 0.39 | 1.7e-53 | 4.6 | 6.0 | 1.5e-09 | 0.53 | 1.00 | 0.00 | FALSE |
127 | ROSMAP | Brain Pre-frontal Cortex | FAM85B | 0.16 | 0.23 | enet | 18 | 0.22 | 1.8e-28 | 5.8 | -6.4 | 1.9e-10 | -0.61 | 0.40 | 0.60 | FALSE |
128 | ROSMAP | Brain Pre-frontal Cortex | AF131215.3 | 0.08 | 0.10 | lasso | 7 | 0.12 | 8.3e-16 | 6.6 | 7.0 | 2.7e-12 | 0.64 | 0.97 | 0.03 | FALSE |
129 | ROSMAP | Brain Pre-frontal Cortex | AF131216.5 | 0.25 | 0.27 | lasso | 10 | 0.26 | 1.5e-32 | -6.0 | 6.2 | 5.4e-10 | 0.53 | 1.00 | 0.00 | FALSE |
130 | ROSMAP | Brain Pre-frontal Cortex | FAM66D | 0.15 | 0.16 | bslmm | 227 | 0.17 | 5.3e-21 | -4.3 | -5.6 | 1.9e-08 | -0.47 | 1.00 | 0.00 | FALSE |
131 | ROSMAP | Brain Pre-frontal Cortex | RP11-481A20.11 | 0.06 | 0.04 | blup | 286 | 0.04 | 2.2e-06 | 7.0 | 6.8 | 1.0e-11 | 0.63 | 0.15 | 0.85 | FALSE |
132 | ROSMAP | Brain Pre-frontal Cortex | AF131215.2 | 0.49 | 0.57 | lasso | 7 | 0.57 | 9.0e-89 | -5.7 | 6.0 | 2.1e-09 | 0.52 | 1.00 | 0.00 | FALSE |
133 | ROSMAP | Brain Pre-frontal Cortex | FAM85A | 0.11 | 0.07 | enet | 23 | 0.11 | 4.3e-14 | 6.9 | 6.2 | 5.3e-10 | 0.58 | 0.10 | 0.90 | FALSE |
134 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | AMAC1L2 | 0.05 | 0.05 | blup | 55 | 0.05 | 2.9e-05 | -6.0 | -5.8 | 6.5e-09 | -0.51 | 0.02 | 0.98 | FALSE |
135 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ERI1 | 0.05 | 0.01 | blup | 72 | 0.01 | 5.0e-02 | 7.0 | -6.2 | 5.1e-10 | -0.47 | 0.01 | 0.67 | FALSE |
136 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | FLJ10661 | 0.10 | 0.16 | lasso | 1 | 0.15 | 6.1e-13 | 6.1 | 6.1 | 9.0e-10 | 0.57 | 0.06 | 0.94 | FALSE |
137 | The Cancer Genome Atlas | Breast Invasive Carcinoma | AMAC1L2 | 0.03 | 0.01 | enet | 6 | 0.02 | 1.7e-05 | -6.3 | -6.1 | 1.4e-09 | -0.56 | 0.01 | 0.99 | FALSE |
138 | The Cancer Genome Atlas | Breast Invasive Carcinoma | BLK | 0.03 | 0.01 | lasso | 3 | 0.01 | 2.1e-03 | 6.3 | -6.2 | 5.9e-10 | -0.48 | 0.16 | 0.78 | FALSE |
139 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FDFT1 | 0.02 | 0.00 | blup | 110 | 0.01 | 1.1e-02 | -4.5 | -6.7 | 2.7e-11 | -0.44 | 0.02 | 0.76 | FALSE |
140 | The Cancer Genome Atlas | Breast Invasive Carcinoma | GATA4 | 0.01 | 0.00 | blup | 125 | 0.01 | 2.9e-03 | 6.9 | -6.9 | 5.0e-12 | -0.51 | 0.04 | 0.75 | FALSE |
141 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PPP1R3B | 0.03 | 0.03 | enet | 8 | 0.03 | 1.8e-06 | 4.3 | -7.1 | 1.5e-12 | -0.45 | 0.06 | 0.94 | FALSE |
142 | The Cancer Genome Atlas | Breast Invasive Carcinoma | RP1L1 | 0.02 | 0.01 | lasso | 2 | 0.01 | 4.1e-03 | 4.2 | 5.4 | 7.4e-08 | 0.49 | 0.05 | 0.31 | FALSE |
143 | The Cancer Genome Atlas | Breast Invasive Carcinoma | TDH | 0.03 | 0.04 | lasso | 4 | 0.03 | 1.2e-07 | -5.2 | -5.4 | 6.9e-08 | -0.44 | 0.06 | 0.94 | FALSE |
144 | The Cancer Genome Atlas | Colon Adenocarcinoma | FAM86B1 | 0.08 | 0.00 | lasso | 6 | 0.00 | 2.0e-01 | -6.9 | -7.0 | 3.5e-12 | -0.52 | 0.02 | 0.42 | FALSE |
145 | The Cancer Genome Atlas | Colon Adenocarcinoma | FLJ10661 | 0.15 | 0.26 | lasso | 4 | 0.23 | 3.0e-13 | 6.1 | 6.2 | 5.1e-10 | 0.58 | 0.08 | 0.92 | FALSE |
146 | The Cancer Genome Atlas | Esophageal Carcinoma | FLJ10661 | 0.20 | 0.23 | lasso | 2 | 0.23 | 5.6e-08 | 6.2 | 6.2 | 5.7e-10 | 0.57 | 0.04 | 0.96 | FALSE |
147 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | AMAC1L2 | 0.03 | 0.02 | blup | 55 | 0.03 | 1.8e-04 | 5.3 | -5.4 | 7.3e-08 | -0.52 | 0.12 | 0.70 | FALSE |
148 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | BLK | 0.04 | 0.05 | enet | 6 | 0.05 | 7.3e-06 | 5.5 | -6.3 | 2.4e-10 | -0.44 | 0.24 | 0.74 | FALSE |
149 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | FLJ10661 | 0.07 | 0.14 | lasso | 3 | 0.14 | 3.7e-15 | 6.1 | 6.2 | 6.0e-10 | 0.58 | 0.06 | 0.94 | FALSE |
150 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | AMAC1L2 | 0.03 | 0.03 | enet | 5 | 0.03 | 5.5e-04 | 5.3 | -6.0 | 1.8e-09 | -0.52 | 0.01 | 0.98 | FALSE |
151 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NEIL2 | 0.05 | 0.07 | enet | 5 | 0.08 | 8.1e-09 | 6.8 | 7.3 | 2.1e-13 | 0.39 | 0.03 | 0.97 | FALSE |
152 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TDH | 0.05 | 0.01 | blup | 67 | 0.04 | 1.3e-05 | 5.5 | -5.6 | 2.7e-08 | -0.52 | 0.20 | 0.76 | FALSE |
153 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | AMAC1L2 | 0.04 | 0.00 | blup | 55 | 0.02 | 2.6e-02 | -6.3 | -6.0 | 2.3e-09 | -0.56 | 0.02 | 0.74 | FALSE |
154 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | BLK | 0.09 | 0.04 | lasso | 2 | 0.03 | 9.5e-03 | 5.5 | -5.2 | 2.4e-07 | -0.41 | 0.12 | 0.30 | FALSE |
155 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FLJ10661 | 0.07 | 0.02 | blup | 42 | 0.04 | 2.9e-03 | 5.3 | 6.1 | 9.1e-10 | 0.58 | 0.04 | 0.59 | FALSE |
156 | The Cancer Genome Atlas | Brain Lower Grade Glioma | FLJ10661 | 0.21 | 0.26 | lasso | 9 | 0.30 | 2.3e-34 | 5.8 | -6.5 | 8.3e-11 | -0.58 | 0.14 | 0.86 | FALSE |
157 | The Cancer Genome Atlas | Brain Lower Grade Glioma | NEIL2 | 0.08 | 0.08 | enet | 6 | 0.08 | 1.7e-09 | 7.1 | 6.8 | 1.5e-11 | 0.27 | 0.03 | 0.97 | FALSE |
158 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | FLJ10661 | 0.09 | 0.07 | blup | 41 | 0.07 | 3.6e-04 | -6.6 | 6.2 | 5.4e-10 | 0.53 | 0.01 | 0.91 | FALSE |
159 | The Cancer Genome Atlas | Lung Adenocarcinoma | ERI1 | 0.06 | 0.04 | blup | 72 | 0.04 | 1.5e-05 | 7.2 | -6.4 | 2.0e-10 | -0.52 | 0.00 | 0.99 | FALSE |
160 | The Cancer Genome Atlas | Lung Adenocarcinoma | FLJ10661 | 0.06 | 0.05 | lasso | 3 | 0.04 | 2.4e-05 | 5.3 | 5.4 | 8.3e-08 | 0.55 | 0.22 | 0.74 | FALSE |
161 | The Cancer Genome Atlas | Lung Adenocarcinoma | TDH | 0.11 | 0.03 | enet | 16 | 0.04 | 7.6e-06 | -5.2 | -5.1 | 2.7e-07 | -0.35 | 0.02 | 0.98 | FALSE |
162 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | AMAC1L2 | 0.03 | 0.03 | blup | 55 | 0.04 | 3.0e-05 | 5.4 | -6.2 | 5.9e-10 | -0.59 | 0.06 | 0.93 | FALSE |
163 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | FLJ10661 | 0.12 | 0.09 | lasso | 4 | 0.08 | 4.7e-09 | 5.8 | 5.6 | 2.1e-08 | 0.55 | 0.19 | 0.81 | FALSE |
164 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | FLJ10661 | 0.11 | 0.06 | enet | 5 | 0.07 | 2.3e-05 | 6.1 | 6.1 | 1.4e-09 | 0.55 | 0.02 | 0.89 | FALSE |
165 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | FLJ10661 | 0.17 | 0.11 | enet | 10 | 0.16 | 3.3e-07 | -5.9 | 5.6 | 2.2e-08 | 0.50 | 0.02 | 0.96 | FALSE |
166 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | FAM167A | 0.29 | 0.24 | lasso | 2 | 0.27 | 3.5e-11 | 5.5 | 5.6 | 1.6e-08 | 0.45 | 0.34 | 0.66 | FALSE |
167 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | FLJ10661 | 0.25 | 0.18 | lasso | 4 | 0.16 | 4.2e-07 | 6.2 | -6.2 | 6.4e-10 | -0.57 | 0.04 | 0.96 | FALSE |
168 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | MFHAS1 | 0.16 | 0.01 | blup | 138 | 0.08 | 4.3e-04 | -5.1 | -5.1 | 2.9e-07 | -0.34 | 0.06 | 0.39 | FALSE |
169 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | TDH | 0.31 | 0.10 | lasso | 3 | 0.13 | 1.1e-05 | 5.5 | 5.7 | 1.2e-08 | 0.42 | 0.18 | 0.67 | FALSE |
170 | The Cancer Genome Atlas | Prostate Adenocarcinoma | AMAC1L2 | 0.04 | 0.04 | blup | 55 | 0.05 | 1.2e-05 | 5.4 | -5.9 | 2.9e-09 | -0.55 | 0.16 | 0.72 | FALSE |
171 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PPP1R3B | 0.06 | 0.01 | blup | 69 | 0.02 | 2.6e-03 | 5.2 | -6.5 | 6.6e-11 | -0.36 | 0.02 | 0.48 | FALSE |
172 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TDH | 0.06 | 0.02 | blup | 67 | 0.06 | 1.5e-06 | -3.5 | -5.6 | 1.7e-08 | -0.52 | 0.27 | 0.70 | FALSE |
173 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FLJ10661 | 0.12 | 0.00 | blup | 42 | 0.00 | 6.9e-01 | 6.1 | 5.5 | 4.8e-08 | 0.48 | 0.01 | 0.36 | FALSE |
174 | The Cancer Genome Atlas | Stomach Adenocarcinoma | BLK | 0.07 | 0.05 | blup | 115 | 0.03 | 2.4e-03 | 2.9 | -6.6 | 4.3e-11 | -0.44 | 0.19 | 0.47 | FALSE |
175 | The Cancer Genome Atlas | Stomach Adenocarcinoma | FLJ10661 | 0.08 | 0.05 | blup | 42 | 0.07 | 9.3e-06 | 5.3 | 5.5 | 4.0e-08 | 0.56 | 0.11 | 0.88 | FALSE |
176 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | FLJ10661 | 0.24 | 0.36 | enet | 8 | 0.35 | 4.1e-13 | 6.1 | 6.0 | 1.5e-09 | 0.56 | 0.06 | 0.94 | FALSE |
177 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ZNF705D | 0.23 | 0.20 | lasso | 3 | 0.24 | 4.7e-09 | 6.9 | -6.9 | 3.9e-12 | -0.53 | 0.00 | 1.00 | FALSE |
178 | The Cancer Genome Atlas | Thyroid Carcinoma | AMAC1L2 | 0.10 | 0.03 | enet | 5 | 0.05 | 1.1e-05 | 2.4 | -5.2 | 1.8e-07 | -0.45 | 0.02 | 0.86 | FALSE |
179 | The Cancer Genome Atlas | Thyroid Carcinoma | NEIL2 | 0.14 | 0.08 | blup | 97 | 0.10 | 6.3e-10 | 6.8 | 5.9 | 3.1e-09 | 0.33 | 0.15 | 0.85 | FALSE |
180 | The Cancer Genome Atlas | Thyroid Carcinoma | SGK223 | 0.16 | 0.20 | enet | 14 | 0.22 | 6.1e-21 | -6.3 | -6.3 | 3.0e-10 | -0.57 | 0.02 | 0.98 | FALSE |
181 | The Cancer Genome Atlas | Thyroid Carcinoma | TDH | 0.08 | 0.08 | blup | 67 | 0.09 | 8.1e-09 | 5.4 | -5.4 | 6.5e-08 | -0.50 | 0.25 | 0.74 | FALSE |