Best TWAS P=3.33e-48 · Best GWAS P=6.88e-45 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CENPO | 0.07 | 0.03 | bslmm | 322 | 0.03 | 7.0e-05 | -1.94 | 5.2 | 2.0e-07 | -0.08 | 0.02 | 0.96 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | GTF3C2 | 0.06 | 0.09 | lasso | 8 | 0.08 | 7.2e-10 | 5.13 | -7.6 | 3.3e-14 | 0.72 | 0.28 | 0.72 | TRUE |
3 | CommonMind | Brain Pre-frontal Cortex | IFT172 | 0.06 | 0.09 | enet | 16 | 0.09 | 3.9e-11 | 5.05 | 7.7 | 2.1e-14 | -0.75 | 0.48 | 0.52 | FALSE |
4 | CommonMind | Brain Pre-frontal Cortex | UBXN2A | 0.22 | 0.18 | enet | 28 | 0.24 | 3.0e-28 | -8.74 | 7.6 | 2.3e-14 | -0.03 | 1.00 | 0.00 | FALSE |
5 | GTEx | Adipose Subcutaneous | UBXN2A | 0.06 | 0.04 | lasso | 5 | 0.04 | 5.2e-04 | -8.68 | -7.0 | 3.1e-12 | -0.07 | 0.29 | 0.68 | FALSE |
6 | GTEx | Adipose Subcutaneous | AC074117.10 | 0.06 | 0.04 | lasso | 5 | 0.02 | 4.8e-03 | 6.55 | -6.7 | 2.3e-11 | 0.65 | 0.45 | 0.27 | FALSE |
7 | GTEx | Adipose Visceral Omentum | NRBP1 | 0.05 | 0.05 | lasso | 4 | 0.04 | 2.5e-03 | 5.24 | -5.3 | 1.4e-07 | 0.61 | 0.34 | 0.07 | FALSE |
8 | GTEx | Adipose Visceral Omentum | PPM1G | 0.06 | 0.01 | lasso | 5 | 0.01 | 1.1e-01 | 5.24 | -5.8 | 5.8e-09 | 0.64 | 0.11 | 0.28 | FALSE |
9 | GTEx | Adipose Visceral Omentum | UBXN2A | 0.10 | 0.08 | enet | 29 | 0.03 | 9.8e-03 | -8.70 | -7.0 | 2.6e-12 | -0.08 | 0.10 | 0.88 | FALSE |
10 | GTEx | Adipose Visceral Omentum | AC074117.10 | 0.14 | 0.09 | lasso | 3 | 0.08 | 5.0e-05 | 5.86 | -5.7 | 1.2e-08 | 0.60 | 0.85 | 0.08 | FALSE |
11 | GTEx | Adrenal Gland | KRTCAP3 | 0.11 | 0.16 | lasso | 4 | 0.15 | 4.9e-06 | 5.09 | 5.1 | 2.8e-07 | -0.60 | 0.54 | 0.38 | FALSE |
12 | GTEx | Adrenal Gland | PFN4 | 0.20 | 0.15 | lasso | 2 | 0.18 | 3.9e-07 | -5.75 | -5.2 | 2.4e-07 | 0.09 | 0.21 | 0.08 | FALSE |
13 | GTEx | Artery Aorta | NCOA1 | 0.15 | 0.00 | enet | 15 | 0.01 | 1.4e-01 | -4.79 | -7.2 | 4.9e-13 | -0.01 | 0.07 | 0.04 | FALSE |
14 | GTEx | Artery Aorta | AC074117.10 | 0.06 | 0.04 | lasso | 3 | 0.03 | 6.8e-03 | 5.86 | -5.8 | 5.9e-09 | 0.58 | 0.24 | 0.14 | FALSE |
15 | GTEx | Artery Tibial | PPM1G | 0.06 | 0.02 | lasso | 4 | 0.03 | 2.3e-03 | 5.03 | -6.6 | 5.5e-11 | 0.66 | 0.29 | 0.12 | FALSE |
16 | GTEx | Artery Tibial | UBXN2A | 0.12 | 0.06 | enet | 24 | 0.09 | 1.5e-07 | -1.73 | -6.2 | 7.3e-10 | -0.06 | 0.85 | 0.15 | FALSE |
17 | GTEx | Artery Tibial | AC074117.10 | 0.13 | 0.14 | lasso | 5 | 0.13 | 1.1e-10 | 5.86 | -6.2 | 5.6e-10 | 0.62 | 0.99 | 0.00 | FALSE |
18 | GTEx | Brain Cerebellum | AC074117.10 | 0.13 | 0.08 | enet | 6 | 0.07 | 4.4e-03 | 5.23 | 5.3 | 1.1e-07 | -0.60 | 0.09 | 0.48 | FALSE |
19 | GTEx | Brain Cortex | KRTCAP3 | 0.19 | 0.10 | lasso | 2 | 0.12 | 3.7e-04 | 4.46 | 5.2 | 2.1e-07 | -0.54 | 0.24 | 0.35 | FALSE |
20 | GTEx | Breast Mammary Tissue (Male) | NCOA1 | 0.13 | -0.01 | lasso | 3 | 0.04 | 4.8e-02 | -4.61 | -6.1 | 1.3e-09 | 0.09 | 0.05 | 0.06 | TRUE |
21 | GTEx | Breast Mammary Tissue (Female) | AC074117.10 | 0.06 | 0.01 | lasso | 2 | 0.04 | 2.7e-02 | 6.92 | 7.8 | 5.9e-15 | -0.23 | 0.04 | 0.05 | TRUE |
22 | GTEx | Cells EBV-transformed lymphocytes | NRBP1 | 0.11 | 0.13 | enet | 13 | 0.15 | 1.2e-05 | 5.09 | -5.8 | 6.1e-09 | 0.62 | 0.57 | 0.10 | FALSE |
23 | GTEx | Cells EBV-transformed lymphocytes | PFN4 | 0.18 | 0.13 | lasso | 12 | 0.12 | 8.9e-05 | -5.73 | -7.2 | 4.6e-13 | 0.06 | 0.32 | 0.09 | FALSE |
24 | GTEx | Cells Transformed fibroblasts | NRBP1 | 0.09 | 0.08 | lasso | 3 | 0.08 | 7.8e-07 | 5.86 | -6.0 | 1.9e-09 | 0.61 | 0.95 | 0.04 | FALSE |
25 | GTEx | Cells Transformed fibroblasts | UBXN2A | 0.12 | 0.07 | enet | 12 | 0.12 | 4.7e-09 | -8.18 | -5.2 | 1.6e-07 | -0.07 | 0.49 | 0.51 | FALSE |
26 | GTEx | Cells Transformed fibroblasts | AC074117.10 | 0.21 | 0.19 | enet | 23 | 0.18 | 1.6e-13 | 6.55 | -6.3 | 3.4e-10 | 0.66 | 0.87 | 0.13 | FALSE |
27 | GTEx | Colon Sigmoid | DNMT3A | 0.19 | -0.01 | lasso | 8 | 0.00 | 4.5e-01 | -2.48 | -7.3 | 2.9e-13 | 0.06 | 0.08 | 0.06 | TRUE |
28 | GTEx | Colon Sigmoid | AC074117.10 | 0.13 | 0.18 | lasso | 3 | 0.14 | 1.1e-05 | 5.86 | -5.7 | 9.5e-09 | 0.60 | 0.85 | 0.08 | FALSE |
29 | GTEx | Colon Transverse | NRBP1 | 0.08 | 0.03 | enet | 14 | 0.00 | 2.0e-01 | 5.82 | -5.6 | 1.9e-08 | 0.59 | 0.16 | 0.14 | FALSE |
30 | GTEx | Colon Transverse | UBXN2A | 0.11 | 0.01 | enet | 8 | 0.03 | 8.7e-03 | -8.70 | -9.2 | 5.4e-20 | -0.06 | 0.07 | 0.71 | FALSE |
31 | GTEx | Colon Transverse | PFN4 | 0.14 | 0.07 | lasso | 2 | 0.04 | 3.3e-03 | -5.68 | -5.7 | 1.2e-08 | 0.05 | 0.07 | 0.42 | FALSE |
32 | GTEx | Esophagus Gastroesophageal Junction | SF3B14 | 0.10 | 0.01 | lasso | 8 | 0.00 | 3.5e-01 | -3.15 | -5.9 | 2.9e-09 | 0.01 | 0.09 | 0.23 | TRUE |
33 | GTEx | Esophagus Gastroesophageal Junction | NRBP1 | 0.11 | 0.01 | enet | 23 | 0.02 | 7.7e-02 | 2.67 | -5.2 | 2.5e-07 | 0.53 | 0.12 | 0.24 | FALSE |
34 | GTEx | Esophagus Gastroesophageal Junction | PFN4 | 0.13 | 0.01 | lasso | 12 | 0.01 | 9.7e-02 | -7.40 | -6.1 | 1.1e-09 | 0.08 | 0.11 | 0.06 | TRUE |
35 | GTEx | Esophagus Gastroesophageal Junction | AC074117.10 | 0.12 | 0.13 | enet | 9 | 0.09 | 4.9e-04 | 5.21 | -6.3 | 2.2e-10 | 0.64 | 0.43 | 0.30 | TRUE |
36 | GTEx | Esophagus Gastroesophageal Junction | RP11-373D23.3 | 0.17 | 0.01 | enet | 15 | 0.04 | 1.2e-02 | 4.34 | -5.9 | 3.8e-09 | 0.28 | 0.07 | 0.30 | FALSE |
37 | GTEx | Esophagus Mucosa | TP53I3 | 0.16 | 0.03 | enet | 23 | 0.06 | 8.2e-05 | 0.61 | -7.4 | 1.2e-13 | 0.05 | 0.11 | 0.10 | FALSE |
38 | GTEx | Esophagus Mucosa | PFN4 | 0.16 | 0.15 | lasso | 4 | 0.15 | 3.6e-10 | -5.73 | -6.1 | 1.2e-09 | 0.05 | 1.00 | 0.00 | FALSE |
39 | GTEx | Esophagus Mucosa | AC074117.10 | 0.12 | 0.14 | lasso | 8 | 0.14 | 2.1e-09 | 6.55 | -8.4 | 3.8e-17 | 0.74 | 0.94 | 0.06 | FALSE |
40 | GTEx | Esophagus Muscularis | NCOA1 | 0.11 | 0.01 | enet | 9 | 0.01 | 5.8e-02 | -4.74 | -8.2 | 3.5e-16 | 0.01 | 0.06 | 0.28 | FALSE |
41 | GTEx | Esophagus Muscularis | NRBP1 | 0.07 | 0.04 | lasso | 6 | 0.04 | 1.3e-03 | 6.55 | -9.2 | 4.8e-20 | 0.82 | 0.01 | 0.97 | FALSE |
42 | GTEx | Esophagus Muscularis | AC074117.10 | 0.17 | 0.14 | enet | 5 | 0.09 | 6.6e-06 | 6.55 | -6.8 | 1.4e-11 | 0.65 | 0.73 | 0.26 | FALSE |
43 | GTEx | Heart Atrial Appendage | UBXN2A | 0.08 | 0.02 | lasso | 3 | 0.02 | 5.2e-02 | -7.76 | -8.8 | 1.7e-18 | 0.02 | 0.22 | 0.32 | FALSE |
44 | GTEx | Heart Atrial Appendage | PFN4 | 0.22 | 0.06 | lasso | 7 | 0.10 | 2.8e-05 | 0.61 | -5.9 | 3.5e-09 | 0.12 | 0.65 | 0.04 | FALSE |
45 | GTEx | Heart Left Ventricle | PFN4 | 0.23 | 0.28 | lasso | 6 | 0.28 | 4.1e-15 | -5.68 | -7.0 | 2.3e-12 | 0.05 | 1.00 | 0.00 | FALSE |
46 | GTEx | Lung | NCOA1 | 0.12 | 0.04 | lasso | 7 | 0.06 | 1.9e-05 | -3.97 | -7.9 | 2.1e-15 | 0.01 | 0.52 | 0.02 | TRUE |
47 | GTEx | Lung | UBXN2A | 0.09 | 0.06 | enet | 7 | 0.07 | 6.1e-06 | -2.06 | -6.6 | 3.3e-11 | -0.07 | 0.34 | 0.66 | FALSE |
48 | GTEx | Lung | AC074117.10 | 0.07 | 0.06 | lasso | 6 | 0.05 | 6.6e-05 | 5.03 | -5.3 | 1.4e-07 | 0.63 | 0.75 | 0.25 | FALSE |
49 | GTEx | Lung | RP11-373D23.3 | 0.08 | 0.00 | enet | 21 | 0.02 | 2.3e-02 | 4.44 | -6.1 | 8.2e-10 | 0.23 | 0.17 | 0.26 | FALSE |
50 | GTEx | Muscle Skeletal | SNX17 | 0.18 | 0.24 | lasso | 6 | 0.26 | 6.2e-26 | 5.32 | -5.4 | 7.3e-08 | 0.61 | 1.00 | 0.00 | FALSE |
51 | GTEx | Muscle Skeletal | PFN4 | 0.12 | 0.09 | lasso | 4 | 0.09 | 5.6e-09 | -5.73 | -5.8 | 8.7e-09 | 0.07 | 1.00 | 0.00 | FALSE |
52 | GTEx | Muscle Skeletal | GPN1 | 0.06 | 0.02 | enet | 9 | 0.02 | 2.9e-03 | -2.50 | -6.7 | 2.9e-11 | 0.43 | 0.29 | 0.07 | FALSE |
53 | GTEx | Nerve Tibial | NCOA1 | 0.13 | 0.02 | enet | 15 | 0.07 | 8.9e-06 | -3.55 | -5.5 | 5.0e-08 | 0.03 | 0.83 | 0.01 | TRUE |
54 | GTEx | Nerve Tibial | NRBP1 | 0.06 | 0.00 | enet | 9 | 0.02 | 2.0e-02 | 6.55 | -5.8 | 6.1e-09 | 0.61 | 0.28 | 0.61 | FALSE |
55 | GTEx | Nerve Tibial | PFN4 | 0.25 | 0.16 | lasso | 5 | 0.20 | 3.8e-14 | -5.73 | -5.3 | 9.0e-08 | 0.09 | 1.00 | 0.00 | FALSE |
56 | GTEx | Ovary | AC074117.10 | 0.16 | 0.04 | enet | 9 | 0.05 | 2.0e-02 | 5.24 | -8.4 | 4.3e-17 | 0.77 | 0.04 | 0.80 | FALSE |
57 | GTEx | Pituitary | AC074117.10 | 0.23 | 0.23 | lasso | 8 | 0.29 | 5.6e-08 | 4.49 | -5.8 | 5.0e-09 | 0.66 | 0.34 | 0.57 | FALSE |
58 | GTEx | Skin Sun Exposed Lower leg | NRBP1 | 0.10 | 0.08 | lasso | 6 | 0.08 | 3.6e-07 | 5.21 | -5.2 | 1.6e-07 | 0.58 | 1.00 | 0.00 | FALSE |
59 | GTEx | Skin Sun Exposed Lower leg | SLC4A1AP | 0.04 | 0.01 | lasso | 3 | 0.02 | 1.7e-02 | 5.06 | 5.4 | 7.0e-08 | -0.60 | 0.21 | 0.11 | FALSE |
60 | GTEx | Skin Sun Exposed Lower leg | UBXN2A | 0.08 | 0.04 | enet | 17 | 0.03 | 1.3e-03 | -8.64 | -7.0 | 2.7e-12 | -0.06 | 0.57 | 0.34 | TRUE |
61 | GTEx | Small Intestine Terminal Ileum | UBXN2A | 0.18 | 0.08 | enet | 33 | 0.16 | 2.5e-04 | -8.62 | -7.3 | 2.1e-13 | -0.08 | 0.03 | 0.89 | FALSE |
62 | GTEx | Spleen | UBXN2A | 0.31 | 0.11 | enet | 19 | 0.17 | 4.1e-05 | 9.49 | -10.0 | 1.3e-23 | -0.05 | 0.04 | 0.92 | TRUE |
63 | GTEx | Stomach | AC074117.10 | 0.06 | 0.01 | lasso | 7 | 0.01 | 7.8e-02 | 6.55 | 9.2 | 2.9e-20 | -0.36 | 0.20 | 0.08 | FALSE |
64 | GTEx | Testis | NRBP1 | 0.16 | 0.09 | lasso | 3 | 0.06 | 1.8e-03 | 6.55 | -9.0 | 1.6e-19 | 0.80 | 0.03 | 0.96 | FALSE |
65 | GTEx | Testis | FAM228B | 0.14 | 0.09 | enet | 11 | 0.10 | 3.3e-05 | 6.31 | 5.5 | 4.5e-08 | 0.09 | 0.45 | 0.31 | FALSE |
66 | GTEx | Testis | AC074117.10 | 0.14 | 0.08 | lasso | 6 | 0.12 | 4.5e-06 | 5.28 | -9.9 | 2.6e-23 | 0.85 | 0.05 | 0.94 | FALSE |
67 | GTEx | Thyroid | FNDC4 | 0.24 | 0.10 | enet | 23 | 0.16 | 2.2e-12 | 8.68 | 12.1 | 1.2e-33 | -0.69 | 0.67 | 0.33 | FALSE |
68 | GTEx | Thyroid | PPM1G | 0.06 | 0.06 | lasso | 3 | 0.06 | 2.2e-05 | 5.24 | -5.2 | 2.3e-07 | 0.60 | 0.92 | 0.01 | FALSE |
69 | GTEx | Thyroid | AC074117.10 | 0.17 | 0.14 | lasso | 4 | 0.15 | 2.7e-11 | 5.21 | -5.6 | 2.5e-08 | 0.61 | 1.00 | 0.00 | FALSE |
70 | GTEx | Thyroid | RP11-373D23.3 | 0.16 | 0.07 | enet | 19 | 0.04 | 2.6e-04 | 4.28 | -6.7 | 2.1e-11 | 0.15 | 0.53 | 0.11 | TRUE |
71 | GTEx | Vagina | AC074117.10 | 0.14 | 0.04 | enet | 13 | 0.06 | 1.4e-02 | 4.46 | -7.6 | 2.5e-14 | 0.72 | 0.08 | 0.57 | FALSE |
72 | GTEx | Whole Blood | UBXN2A | 0.17 | 0.07 | lasso | 8 | 0.09 | 2.1e-08 | -2.08 | -7.2 | 5.0e-13 | -0.08 | 0.03 | 0.97 | FALSE |
73 | METSIM | Adipose | BRE | 0.03 | 0.00 | blup | 534 | 0.00 | 1.3e-01 | -0.34 | -5.5 | 3.3e-08 | 0.30 | 0.10 | 0.05 | FALSE |
74 | METSIM | Adipose | KRTCAP3 | 0.05 | 0.01 | blup | 288 | 0.03 | 1.6e-05 | 5.06 | 5.8 | 6.2e-09 | -0.52 | 0.96 | 0.03 | FALSE |
75 | METSIM | Adipose | NRBP1 | 0.06 | 0.09 | lasso | 3 | 0.08 | 1.6e-12 | 6.55 | -6.9 | 4.1e-12 | 0.67 | 1.00 | 0.00 | FALSE |
76 | METSIM | Adipose | PREB | 0.04 | 0.01 | bslmm | 302 | 0.02 | 5.6e-04 | 2.75 | 5.4 | 5.8e-08 | -0.36 | 0.07 | 0.30 | FALSE |
77 | METSIM | Adipose | SLC35F6 | 0.04 | 0.01 | blup | 362 | 0.02 | 1.1e-03 | 3.86 | 5.2 | 2.7e-07 | -0.03 | 0.09 | 0.34 | FALSE |
78 | METSIM | Adipose | SLC5A6 | 0.03 | 0.02 | bslmm | 298 | 0.01 | 3.9e-03 | 3.08 | -6.0 | 2.4e-09 | 0.43 | 0.25 | 0.04 | FALSE |
79 | METSIM | Adipose | UBXN2A | 0.07 | 0.03 | bslmm | 403 | 0.06 | 5.3e-10 | -8.64 | -7.2 | 6.2e-13 | 0.00 | 0.89 | 0.10 | FALSE |
80 | NTR | Blood | CGREF1 | 0.01 | 0.00 | blup | 307 | 0.01 | 5.7e-03 | 1.97 | 5.3 | 1.2e-07 | -0.49 | 0.20 | 0.07 | FALSE |
81 | NTR | Blood | ITSN2 | 0.02 | 0.00 | bslmm | 345 | 0.01 | 2.9e-03 | -4.94 | 6.6 | 4.9e-11 | 0.07 | 0.05 | 0.02 | FALSE |
82 | ROSMAP | Brain Pre-frontal Cortex | EFR3B | 0.07 | 0.03 | bslmm | 348 | 0.03 | 3.5e-05 | 1.93 | -5.2 | 1.9e-07 | -0.09 | 0.26 | 0.04 | TRUE |
83 | ROSMAP | Brain Pre-frontal Cortex | SNX17 | 0.27 | 0.35 | lasso | 10 | 0.34 | 7.9e-46 | 5.18 | 5.2 | 1.5e-07 | -0.60 | 1.00 | 0.00 | FALSE |
84 | ROSMAP | Brain Pre-frontal Cortex | IFT172 | 0.07 | 0.02 | blup | 287 | 0.03 | 5.8e-05 | 5.86 | 7.8 | 6.2e-15 | -0.63 | 0.43 | 0.49 | FALSE |
85 | ROSMAP | Brain Pre-frontal Cortex | KRTCAP3 | 0.06 | 0.05 | blup | 279 | 0.05 | 3.1e-07 | 5.24 | 5.3 | 1.1e-07 | -0.58 | 0.99 | 0.00 | FALSE |
86 | ROSMAP | Brain Pre-frontal Cortex | KCNK3 | 0.24 | 0.15 | lasso | 3 | 0.15 | 6.5e-19 | 4.81 | -5.3 | 1.1e-07 | 0.09 | 0.02 | 0.97 | TRUE |
87 | ROSMAP | Brain Pre-frontal Cortex | UBXN2A | 0.03 | 0.01 | lasso | 4 | 0.02 | 2.2e-03 | -7.68 | 7.7 | 1.1e-14 | -0.04 | 0.35 | 0.02 | FALSE |
88 | ROSMAP | Brain Pre-frontal Cortex | PFN4 | 0.05 | 0.03 | lasso | 1 | 0.03 | 1.7e-04 | -5.75 | -5.8 | 8.8e-09 | 0.05 | 0.41 | 0.02 | FALSE |
89 | ROSMAP | Brain Pre-frontal Cortex | FTH1P3 | 0.04 | 0.01 | bslmm | 280 | 0.02 | 2.8e-03 | 6.55 | -6.6 | 4.6e-11 | 0.65 | 0.04 | 0.70 | FALSE |
90 | YFS | Blood | EIF2B4 | 0.01 | 0.00 | enet | 9 | 0.00 | 8.5e-02 | 2.76 | 6.3 | 3.9e-10 | -0.52 | 0.04 | 0.03 | FALSE |
91 | YFS | Blood | KRTCAP3 | 0.12 | 0.18 | bslmm | 286 | 0.18 | 1.0e-55 | 5.07 | 5.1 | 2.7e-07 | -0.59 | 1.00 | 0.00 | FALSE |
92 | YFS | Blood | MRPL33 | 0.02 | 0.01 | blup | 385 | 0.01 | 6.4e-05 | 6.44 | -6.0 | 1.4e-09 | 0.22 | 0.97 | 0.00 | FALSE |
93 | YFS | Blood | NRBP1 | 0.01 | 0.01 | lasso | 6 | 0.01 | 9.1e-06 | 5.28 | -6.2 | 5.0e-10 | 0.61 | 0.99 | 0.00 | FALSE |
94 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | NRBP1 | 0.05 | 0.06 | lasso | 2 | 0.05 | 6.0e-05 | 5.17 | -5.2 | 2.3e-07 | 0.60 | 0.82 | 0.01 | FALSE |
95 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | PPM1G | 0.03 | 0.02 | blup | 31 | 0.02 | 8.8e-03 | 5.23 | -6.3 | 2.3e-10 | 0.66 | 0.03 | 0.51 | FALSE |
96 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FKBP1B | 0.04 | 0.02 | blup | 41 | 0.02 | 3.6e-05 | -5.73 | 6.1 | 8.1e-10 | -0.08 | 0.44 | 0.04 | FALSE |
97 | The Cancer Genome Atlas | Breast Invasive Carcinoma | GPN1 | 0.06 | 0.02 | lasso | 6 | 0.02 | 7.2e-05 | -10.69 | -9.1 | 7.1e-20 | 0.54 | 0.00 | 0.99 | FALSE |
98 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SNX17 | 0.08 | 0.01 | blup | 25 | 0.02 | 6.6e-05 | 3.23 | 6.9 | 5.1e-12 | -0.55 | 0.02 | 0.34 | FALSE |
99 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | PFN4 | 0.19 | 0.16 | lasso | 2 | 0.15 | 5.5e-08 | -5.73 | -5.7 | 1.0e-08 | 0.05 | 0.05 | 0.95 | FALSE |
100 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | SUPT7L | 0.06 | 0.03 | blup | 29 | 0.05 | 2.0e-03 | 8.39 | 5.8 | 8.0e-09 | -0.04 | 0.04 | 0.04 | TRUE |
101 | The Cancer Genome Atlas | Glioblastoma Multiforme | NRBP1 | 0.15 | 0.10 | lasso | 2 | 0.10 | 5.8e-04 | 6.55 | -6.6 | 3.8e-11 | 0.67 | 0.02 | 0.09 | FALSE |
102 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | IFT172 | 0.02 | 0.01 | blup | 43 | 0.02 | 2.7e-03 | 4.52 | -5.1 | 3.0e-07 | 0.60 | 0.10 | 0.10 | FALSE |
103 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PFN4 | 0.13 | 0.07 | lasso | 4 | 0.06 | 4.4e-07 | -5.73 | -5.6 | 2.8e-08 | 0.07 | 0.05 | 0.95 | FALSE |
104 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SLC4A1AP | 0.02 | 0.03 | lasso | 2 | 0.03 | 3.7e-04 | -1.97 | 6.1 | 1.2e-09 | -0.47 | 0.01 | 0.83 | FALSE |
105 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ADCY3 | 0.08 | 0.03 | enet | 16 | 0.03 | 1.5e-04 | -4.94 | 5.8 | 5.8e-09 | 0.05 | 0.03 | 0.22 | FALSE |
106 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PFN4 | 0.10 | 0.07 | lasso | 2 | 0.06 | 1.1e-07 | -5.73 | -5.7 | 9.8e-09 | 0.05 | 0.05 | 0.95 | FALSE |
107 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SNX17 | 0.02 | 0.01 | blup | 26 | 0.01 | 2.1e-02 | 5.20 | 5.4 | 7.5e-08 | -0.62 | 0.13 | 0.18 | FALSE |
108 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SUPT7L | 0.05 | 0.02 | blup | 28 | 0.04 | 5.2e-05 | 8.49 | 10.7 | 1.4e-26 | -0.40 | 0.19 | 0.14 | TRUE |
109 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | FNDC4 | 0.13 | 0.06 | lasso | 2 | 0.05 | 1.1e-03 | -14.06 | 14.6 | 3.3e-48 | -0.99 | 0.00 | 0.96 | TRUE |
110 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | NCOA1 | 0.08 | 0.07 | blup | 77 | 0.05 | 5.8e-04 | 3.48 | -6.2 | 4.9e-10 | -0.02 | 0.10 | 0.63 | FALSE |
111 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PFN4 | 0.09 | 0.07 | blup | 43 | 0.08 | 5.3e-09 | -5.75 | -5.5 | 3.7e-08 | 0.09 | 0.05 | 0.95 | TRUE |
112 | The Cancer Genome Atlas | Brain Lower Grade Glioma | UBXN2A | 0.04 | 0.04 | lasso | 1 | 0.03 | 1.4e-04 | -7.69 | 7.7 | 1.4e-14 | -0.03 | 0.36 | 0.14 | FALSE |
113 | The Cancer Genome Atlas | Lung Adenocarcinoma | PFN4 | 0.15 | 0.09 | lasso | 3 | 0.09 | 7.3e-11 | -5.75 | -5.8 | 8.8e-09 | 0.05 | 0.05 | 0.95 | FALSE |
114 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PFN4 | 0.10 | 0.07 | enet | 5 | 0.08 | 5.5e-09 | -5.75 | -5.4 | 8.1e-08 | 0.09 | 0.05 | 0.95 | FALSE |
115 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | EFR3B | 0.26 | 0.01 | lasso | 4 | 0.05 | 3.8e-03 | -4.74 | -5.7 | 1.1e-08 | 0.01 | 0.02 | 0.21 | FALSE |
116 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | PFN4 | 0.20 | 0.18 | lasso | 1 | 0.16 | 4.3e-07 | -5.68 | -5.7 | 1.4e-08 | 0.05 | 0.06 | 0.94 | FALSE |
117 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | POMC | 0.22 | 0.05 | blup | 37 | 0.03 | 2.1e-02 | -5.09 | -5.6 | 2.1e-08 | 0.01 | 0.01 | 0.53 | FALSE |
118 | The Cancer Genome Atlas | Prostate Adenocarcinoma | NRBP1 | 0.03 | 0.03 | blup | 30 | 0.03 | 2.2e-04 | 4.46 | -6.0 | 2.1e-09 | 0.64 | 0.67 | 0.08 | FALSE |
119 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PFN4 | 0.12 | 0.08 | lasso | 6 | 0.07 | 6.3e-08 | -5.73 | -5.7 | 1.3e-08 | 0.07 | 0.05 | 0.95 | FALSE |
120 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PPM1G | 0.03 | 0.02 | blup | 32 | 0.02 | 2.4e-03 | 5.30 | -5.4 | 7.1e-08 | 0.61 | 0.16 | 0.05 | FALSE |
121 | The Cancer Genome Atlas | Rectum Adenocarcinoma | PFN4 | 0.38 | 0.11 | lasso | 5 | 0.05 | 2.8e-02 | -5.73 | -5.7 | 9.5e-09 | 0.04 | 0.02 | 0.23 | FALSE |
122 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | SLC4A1AP | 0.17 | 0.05 | blup | 26 | 0.08 | 4.4e-03 | -10.69 | 5.9 | 4.4e-09 | -0.47 | 0.01 | 0.72 | FALSE |
123 | The Cancer Genome Atlas | Thyroid Carcinoma | FNDC4 | 0.24 | 0.09 | enet | 9 | 0.17 | 1.9e-16 | 8.86 | 12.1 | 1.6e-33 | -0.70 | 0.41 | 0.59 | FALSE |
124 | The Cancer Genome Atlas | Thyroid Carcinoma | GCKR | 0.18 | 0.08 | enet | 5 | 0.13 | 1.7e-12 | 8.68 | 11.4 | 3.4e-30 | -0.64 | 0.91 | 0.09 | FALSE |
125 | The Cancer Genome Atlas | Thyroid Carcinoma | IFT172 | 0.08 | 0.01 | blup | 43 | 0.02 | 6.1e-03 | 9.72 | 10.8 | 2.9e-27 | -0.54 | 0.02 | 0.27 | FALSE |
126 | The Cancer Genome Atlas | Thyroid Carcinoma | NRBP1 | 0.03 | 0.01 | blup | 30 | 0.02 | 5.3e-03 | 6.55 | -5.6 | 2.3e-08 | 0.62 | 0.32 | 0.05 | FALSE |